Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435920 | XP_039690403.1 | 96.512 | 602 | 9 | 2 | 1 | 590 | 1 | 602 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435920 | sp|Q0AW31|PUR9_SYNWW | 49.905 | 525 | 241 | 9 | 68 | 590 | 2 | 506 | 3.68e-169 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435920 | G7KEF8 | 96.512 | 602 | 9 | 2 | 1 | 590 | 1 | 602 | 0.0 | 1195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0787940 | Msa1435920 | 0.984475 | 1.145786e-160 | -8.615850e-47 |
| Msa0825020 | Msa1435920 | 0.851193 | 1.041099e-60 | -8.615850e-47 |
| Msa0864310 | Msa1435920 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435920 | MtrunA17_Chr5g0446531 | 96.192 | 604 | 9 | 3 | 1 | 590 | 1 | 604 | 0.0 | 1190 |
| Msa1435920 | MtrunA17_Chr3g0081851 | 91.751 | 594 | 45 | 3 | 1 | 590 | 1 | 594 | 0.0 | 1094 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435920 | AT2G35040.1 | 80.475 | 589 | 110 | 4 | 4 | 590 | 11 | 596 | 0.0 | 970 |
| Msa1435920 | AT2G35040.2 | 87.030 | 532 | 67 | 2 | 61 | 590 | 14 | 545 | 0.0 | 968 |
Find 146 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTAAACTCACCATTTC+AGG | 0.148250 | tig0027814:-47681 | Msa1435920:intergenic |
| GCCCTTCTGGAATTTCTTAA+AGG | 0.158509 | tig0027814:+49107 | Msa1435920:CDS |
| AAATGACAATGACATGTTTA+AGG | 0.219850 | tig0027814:+45770 | None:intergenic |
| GGAAACGGACTCCAAGAATT+AGG | 0.229559 | tig0027814:+47456 | Msa1435920:CDS |
| GTAATAACTACCCTAATTCT+TGG | 0.259320 | tig0027814:-47467 | Msa1435920:intergenic |
| AGCTTCACGCGATGATATTC+TGG | 0.265858 | tig0027814:+50226 | Msa1435920:CDS |
| CTTCATCTTCACAGCGATTC+AGG | 0.279233 | tig0027814:+46051 | Msa1435920:CDS |
| TTGCAGGACAATTGTATGTT+AGG | 0.284103 | tig0027814:+51013 | Msa1435920:intron |
| CTCATCATCTTCCAACTACT+TGG | 0.308768 | tig0027814:+45937 | Msa1435920:CDS |
| GATGTAACTTTATCATAAAA+TGG | 0.314110 | tig0027814:-48678 | Msa1435920:intergenic |
| AGGATACCTCCATGTATGTT+AGG | 0.327313 | tig0027814:-48139 | Msa1435920:intergenic |
| AAGTCCCTTCTCTGTATAGC+TGG | 0.327564 | tig0027814:-50661 | Msa1435920:intergenic |
| AAAGCTGGAGCTGATGTTAA+AGG | 0.329196 | tig0027814:+51088 | Msa1435920:CDS |
| GCAGAATCACAAAGATGTTT+TGG | 0.343683 | tig0027814:+49058 | Msa1435920:intron |
| TATGATAAAGTTACATCAAC+TGG | 0.354039 | tig0027814:+48684 | Msa1435920:CDS |
| AGAAGATTACCCCGCCCTTC+TGG | 0.358562 | tig0027814:+49094 | Msa1435920:CDS |
| GAGAGAAGAAGGAGAGTAAA+GGG | 0.358624 | tig0027814:-45892 | Msa1435920:intergenic |
| TTACAAATGTGAGGCACTTC+AGG | 0.360088 | tig0027814:+51835 | Msa1435920:CDS |
| AGTGATGCTTTCTTCCCCTT+TGG | 0.367102 | tig0027814:+51124 | Msa1435920:CDS |
| GCTGATCCTGTCAGTGCATT+TGG | 0.368891 | tig0027814:+50272 | Msa1435920:CDS |
| TCCTTGTCTCCCCATCGGTT+GGG | 0.396686 | tig0027814:-50614 | Msa1435920:intergenic |
| AGAAGGGAACAAAGAATGTT+TGG | 0.402055 | tig0027814:+45834 | Msa1435920:exon |
| AGATTCACTATTGTTTCAAC+TGG | 0.402366 | tig0027814:+47591 | Msa1435920:intron |
| GTGGAAAGTCGAAGACTCTA+AGG | 0.406834 | tig0027814:+50694 | Msa1435920:CDS |
| TTATACTAAATAACATATCA+TGG | 0.410873 | tig0027814:-52052 | Msa1435920:intergenic |
| AACTGGAGGCATTGAATTTG+AGG | 0.415684 | tig0027814:+48701 | Msa1435920:CDS |
| CTTAAACTCTCCACACGATT+CGG | 0.415765 | tig0027814:-51052 | Msa1435920:intergenic |
| TGTTTAGCAGTGAGAGAAGA+AGG | 0.418338 | tig0027814:-45903 | Msa1435920:intergenic |
| TGGTGGAGGGTGGCTAGCTC+AGG | 0.419726 | tig0027814:+50767 | Msa1435920:CDS |
| GCTCTCAGTACACATGGAAT+TGG | 0.426355 | tig0027814:+48193 | Msa1435920:CDS |
| ATCCTTGTCTCCCCATCGGT+TGG | 0.430233 | tig0027814:-50615 | Msa1435920:intergenic |
| AAGAAGGATCTCGCATTTGT+TGG | 0.440002 | tig0027814:+47435 | Msa1435920:CDS |
| GGACAATTGTATGTTAGGTA+TGG | 0.442803 | tig0027814:+51018 | Msa1435920:intron |
| GCTTACACAGTTCCCTGAAA+TGG | 0.444808 | tig0027814:+47668 | Msa1435920:CDS |
| AAACTACATACCCAAGTAGT+TGG | 0.445106 | tig0027814:-45948 | Msa1435920:intergenic |
| ATTGTATGAGTCCCAGCTAT+AGG | 0.454013 | tig0027814:-46089 | Msa1435920:intergenic |
| ATTCCTATCAAACCTATAGC+TGG | 0.457443 | tig0027814:+46077 | Msa1435920:CDS |
| GTAGACTGTTGCAATAAGTA+TGG | 0.459251 | tig0027814:+51798 | Msa1435920:CDS |
| GAAACGGACTCCAAGAATTA+GGG | 0.461860 | tig0027814:+47457 | Msa1435920:CDS |
| GAAACCAAGACGAACAGTTC+AGG | 0.470254 | tig0027814:+49129 | Msa1435920:CDS |
| AGAATAGCAATGAGGAAAGC+TGG | 0.471856 | tig0027814:+51073 | Msa1435920:CDS |
| TTAGCCTGAACTGTTCGTCT+TGG | 0.483032 | tig0027814:-49133 | Msa1435920:intergenic |
| CTTTGCAGCAGCTCGAATCA+TGG | 0.485084 | tig0027814:-48757 | Msa1435920:intergenic |
| CTCGCACCTTTCCATGGTGT+TGG | 0.486861 | tig0027814:-49930 | Msa1435920:intergenic |
| TGAGAGAAGAAGGAGAGTAA+AGG | 0.487840 | tig0027814:-45893 | Msa1435920:intergenic |
| AGGTGGTAGTATAAGAGATC+AGG | 0.489865 | tig0027814:+51770 | Msa1435920:CDS |
| GATATCGTTGTCAGACAAGA+AGG | 0.491514 | tig0027814:+47419 | Msa1435920:CDS |
| TGATGTTAAAGGCGCAGCCT+TGG | 0.493828 | tig0027814:+51099 | Msa1435920:CDS |
| GCTTCTGCATTGGAGAGTGC+TGG | 0.495037 | tig0027814:+47621 | Msa1435920:CDS |
| GTCCCAGCTATAGGTTTGAT+AGG | 0.495351 | tig0027814:-46080 | Msa1435920:intergenic |
| TTAAGAAATTCCAGAAGGGC+GGG | 0.498944 | tig0027814:-49104 | Msa1435920:intergenic |
| AAGGATGTTCTATGAAATAG+TGG | 0.499945 | tig0027814:+50632 | Msa1435920:CDS |
| TGGAGGAACAGCTTCTGCAT+TGG | 0.504986 | tig0027814:+47611 | Msa1435920:CDS |
| ACTTGGATGCTGATGCTGCT+TGG | 0.505797 | tig0027814:+50138 | Msa1435920:CDS |
| GCAGCAGCTCGAATCATGGC+TGG | 0.506238 | tig0027814:-48753 | Msa1435920:intergenic |
| AAAGTAAACTCACCATTTCA+GGG | 0.512428 | tig0027814:-47680 | Msa1435920:intergenic |
| TTCGCGATGCGGAGTTTGCA+TGG | 0.518983 | tig0027814:+50862 | Msa1435920:CDS |
| CTATGTTTAGGTTCTTGCTA+AGG | 0.519482 | tig0027814:+50572 | Msa1435920:intron |
| GACAATTGTATGTTAGGTAT+GGG | 0.523870 | tig0027814:+51019 | Msa1435920:CDS |
| AAGGGACTTGAGATTCTTCG+TGG | 0.526147 | tig0027814:+50675 | Msa1435920:CDS |
| AGTCCCTTCTCTGTATAGCT+GGG | 0.526900 | tig0027814:-50660 | Msa1435920:intergenic |
| GGATACCTCCATGTATGTTA+GGG | 0.527663 | tig0027814:-48138 | Msa1435920:intergenic |
| TTCACTATTGTTTCAACTGG+AGG | 0.527694 | tig0027814:+47594 | Msa1435920:CDS |
| CATGATTCGAGCTGCTGCAA+AGG | 0.529173 | tig0027814:+48758 | Msa1435920:CDS |
| CTGCAGTATCTGAGTGGCTG+TGG | 0.535976 | tig0027814:+49198 | Msa1435920:CDS |
| GCGAGAAACAGAGAAGAAGA+AGG | 0.535986 | tig0027814:+45817 | Msa1435920:five_prime_UTR |
| GAGAACACGGGTGGAGGAAG+CGG | 0.537889 | tig0027814:-45862 | Msa1435920:intergenic |
| TGCACAGAGAACACGGGTGG+AGG | 0.541553 | tig0027814:-45868 | Msa1435920:intergenic |
| AAGCTTTCACTCAGACAAGT+TGG | 0.544179 | tig0027814:+50747 | Msa1435920:CDS |
| TCACTCAGACAAGTTGGTGG+AGG | 0.545545 | tig0027814:+50753 | Msa1435920:CDS |
| CACTCAGACAAGTTGGTGGA+GGG | 0.548888 | tig0027814:+50754 | Msa1435920:CDS |
| AGTTCAGGCTAAAGCTTGCA+TGG | 0.549319 | tig0027814:+49144 | Msa1435920:CDS |
| CACTACTCTTTACAAATGTG+AGG | 0.553478 | tig0027814:+51826 | Msa1435920:CDS |
| GAAGCATGTGAAAGTGGGAT+TGG | 0.553568 | tig0027814:+51732 | Msa1435920:CDS |
| AACTCTCCACACGATTCGGT+TGG | 0.553727 | tig0027814:-51048 | Msa1435920:intergenic |
| AGCCAACTCGCACCTTTCCA+TGG | 0.553948 | tig0027814:-49936 | Msa1435920:intergenic |
| TTCCTATCAAACCTATAGCT+GGG | 0.556309 | tig0027814:+46078 | Msa1435920:CDS |
| TCATCATCTTCCAACTACTT+GGG | 0.558505 | tig0027814:+45938 | Msa1435920:CDS |
| AATTTAGAAGCCCAACCGAT+GGG | 0.561483 | tig0027814:+50604 | Msa1435920:CDS |
| TAAGAAATTCCAGAAGGGCG+GGG | 0.561883 | tig0027814:-49103 | Msa1435920:intergenic |
| GATCCTGTCAGTGCATTTGG+CGG | 0.562171 | tig0027814:+50275 | Msa1435920:CDS |
| CGAGAAACAGAGAAGAAGAA+GGG | 0.562530 | tig0027814:+45818 | Msa1435920:five_prime_UTR |
| TGCTTCACAACTACACATGT+GGG | 0.563763 | tig0027814:-50185 | Msa1435920:intergenic |
| GATCTCGCATTTGTTGGAAA+CGG | 0.564069 | tig0027814:+47441 | Msa1435920:CDS |
| CTTTCACTCAGACAAGTTGG+TGG | 0.567270 | tig0027814:+50750 | Msa1435920:CDS |
| GCCCAACCGATGGGGAGACA+AGG | 0.568935 | tig0027814:+50613 | Msa1435920:CDS |
| AATGTCATATAATAACTACT+TGG | 0.572767 | tig0027814:+50121 | Msa1435920:CDS |
| TTCCTTTAAGAAATTCCAGA+AGG | 0.572900 | tig0027814:-49109 | Msa1435920:intergenic |
| GAAAGAGGCACTGTCAAACT+CGG | 0.573270 | tig0027814:-49802 | Msa1435920:intergenic |
| AGACTTGCAGAGGTCAATGC+TGG | 0.574369 | tig0027814:+49889 | Msa1435920:CDS |
| CAATGCTATTGTGATAGCTA+AGG | 0.575910 | tig0027814:+50908 | Msa1435920:CDS |
| CATCAAGTTCAATGTGGTGT+CGG | 0.576647 | tig0027814:+50815 | Msa1435920:CDS |
| GGAGGCATTGAATTTGAGGA+TGG | 0.576680 | tig0027814:+48705 | Msa1435920:CDS |
| ATGTCTGCTTCATCTACTCA+TGG | 0.577733 | tig0027814:+46110 | Msa1435920:CDS |
| GTGGAAGAAGCATGTGAAAG+TGG | 0.578386 | tig0027814:+51726 | Msa1435920:CDS |
| TCGCGTGAAGCTACGCCGCA+AGG | 0.579703 | tig0027814:-50215 | Msa1435920:intergenic |
| ACTCTGCACCCTAACATACA+TGG | 0.579756 | tig0027814:+48130 | Msa1435920:CDS |
| ATTCCGCCAAATGCACTGAC+AGG | 0.580671 | tig0027814:-50278 | Msa1435920:intergenic |
| ACATTGAACTTGATGTCGGA+TGG | 0.584600 | tig0027814:-50807 | Msa1435920:intergenic |
| GAAGAAAGCATCACTAGCCA+AGG | 0.594165 | tig0027814:-51116 | Msa1435920:intergenic |
| CTTGCAGAGGTCAATGCTGG+TGG | 0.596198 | tig0027814:+49892 | Msa1435920:CDS |
| AAAGGGTTGCACAGAGAACA+CGG | 0.598094 | tig0027814:-45875 | Msa1435920:intergenic |
| GAATTTAGAAGCCCAACCGA+TGG | 0.598097 | tig0027814:+50603 | Msa1435920:CDS |
| TTTCAATGTGGAAGTTGATG+AGG | 0.600427 | tig0027814:+50307 | Msa1435920:CDS |
| ATGCTTCACAACTACACATG+TGG | 0.600869 | tig0027814:-50186 | Msa1435920:intergenic |
| CACCACATTGAACTTGATGT+CGG | 0.602479 | tig0027814:-50811 | Msa1435920:intergenic |
| TCGCGAAGCTCACCAACTTG+AGG | 0.603170 | tig0027814:-50846 | Msa1435920:intergenic |
| TGCACCCAGCTATACAGAGA+AGG | 0.606100 | tig0027814:+50656 | Msa1435920:CDS |
| TCCTTTAAGAAATTCCAGAA+GGG | 0.606676 | tig0027814:-49108 | Msa1435920:intergenic |
| TCGGAGAAGACTCCTCAAGT+TGG | 0.608780 | tig0027814:+50834 | Msa1435920:CDS |
| AGTTGGTGAGCTTCGCGATG+CGG | 0.615920 | tig0027814:+50851 | Msa1435920:CDS |
| AGCTTTAACAGCTAGTCTGT+AGG | 0.618534 | tig0027814:-50252 | Msa1435920:intergenic |
| GAACATCCTTGTCTCCCCAT+CGG | 0.623520 | tig0027814:-50619 | Msa1435920:intergenic |
| ATTGAAGCTCTCAGTACACA+TGG | 0.624286 | tig0027814:+48187 | Msa1435920:CDS |
| TATAAAATATTGTCAAATAG+CGG | 0.625188 | tig0027814:+52070 | Msa1435920:three_prime_UTR |
| TGGCTGTGGAAGCAAAGTGC+AGG | 0.627213 | tig0027814:+49212 | Msa1435920:CDS |
| TTTAAGAAATTCCAGAAGGG+CGG | 0.628262 | tig0027814:-49105 | Msa1435920:intergenic |
| GCACCCAGCTATACAGAGAA+GGG | 0.628335 | tig0027814:+50657 | Msa1435920:CDS |
| TGTTGACAAAAGACTTGCAG+AGG | 0.631409 | tig0027814:+49879 | Msa1435920:CDS |
| CTGTGGAAGCAAAGTGCAGG+AGG | 0.633177 | tig0027814:+49215 | Msa1435920:CDS |
| AACAGCTTGGAAAGATGCTG+TGG | 0.633339 | tig0027814:+51707 | Msa1435920:intron |
| ATTGGTGTTATTGCAGAACC+AGG | 0.634278 | tig0027814:+51750 | Msa1435920:CDS |
| TGTATGTTAGGTATGGGAAG+CGG | 0.635594 | tig0027814:+51025 | Msa1435920:CDS |
| AAGCGGCCAACCGAATCGTG+TGG | 0.636421 | tig0027814:+51042 | Msa1435920:CDS |
| CGGAATTGTAGCTTTCAATG+TGG | 0.638388 | tig0027814:+50295 | Msa1435920:CDS |
| TCAGACAAGTTGGTGGAGGG+TGG | 0.644539 | tig0027814:+50757 | Msa1435920:CDS |
| AGAGTTTAAGAATAGCAATG+AGG | 0.651555 | tig0027814:+51065 | Msa1435920:CDS |
| GGAATTGAAAACATTGACAT+CGG | 0.651778 | tig0027814:+48726 | Msa1435920:CDS |
| TGGAAGAAGCATGTGAAAGT+GGG | 0.652615 | tig0027814:+51727 | Msa1435920:CDS |
| AGCTATCCAACACCATGGAA+AGG | 0.655934 | tig0027814:+49924 | Msa1435920:CDS |
| GTGCTACAACATAGACGTAG+AGG | 0.661492 | tig0027814:+52006 | Msa1435920:intron |
| ATTTAGAAGCCCAACCGATG+GGG | 0.662841 | tig0027814:+50605 | Msa1435920:CDS |
| GATAAAGTTACATCAACTGG+AGG | 0.665318 | tig0027814:+48687 | Msa1435920:CDS |
| ATTGAAAACATTGACATCGG+TGG | 0.666352 | tig0027814:+48729 | Msa1435920:CDS |
| GCTATTAACACTTACCAAAG+GGG | 0.673587 | tig0027814:-51138 | Msa1435920:intergenic |
| TGATCTCTTATACTACCACC+TGG | 0.676807 | tig0027814:-51768 | Msa1435920:intergenic |
| GCTTCACAACTACACATGTG+GGG | 0.678910 | tig0027814:-50184 | Msa1435920:intergenic |
| GTGAAGCATACTAATCCTTG+CGG | 0.681266 | tig0027814:+50200 | Msa1435920:CDS |
| GGTTGCACAGAGAACACGGG+TGG | 0.684042 | tig0027814:-45871 | Msa1435920:intergenic |
| GGTGTTATTGCAGAACCAGG+TGG | 0.700300 | tig0027814:+51753 | Msa1435920:CDS |
| GCTACAGCTATCCAACACCA+TGG | 0.708353 | tig0027814:+49919 | Msa1435920:CDS |
| AAGGGTTGCACAGAGAACAC+GGG | 0.710300 | tig0027814:-45874 | Msa1435920:intergenic |
| ATGATTCTGCAGTATCTGAG+TGG | 0.712497 | tig0027814:+49192 | Msa1435920:CDS |
| AGAGGCACTGTCAAACTCGG+AGG | 0.716499 | tig0027814:-49799 | Msa1435920:intergenic |
| ATCCGACATCAAGTTCAATG+TGG | 0.728574 | tig0027814:+50809 | Msa1435920:CDS |
| CTGCACCCTAACATACATGG+AGG | 0.735750 | tig0027814:+48133 | Msa1435920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATGAAAATAAAAAAG+GGG | - | tig0027814:46153-46172 | Msa1435920:intergenic | 10.0% |
| !! | GAAATTAATGAAAATAAAAA+AGG | - | tig0027814:46155-46174 | Msa1435920:intergenic | 10.0% |
| !!! | TATTTTCATTAATTTCATTT+AGG | + | tig0027814:46159-46178 | Msa1435920:intron | 10.0% |
| !!! | ATTTTCATTAATTTCATTTA+GGG | + | tig0027814:46160-46179 | Msa1435920:intron | 10.0% |
| !!! | AGTCTTTTTTTTTTTTTTTT+TGG | - | tig0027814:46478-46497 | Msa1435920:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAGACT+AGG | + | tig0027814:46478-46497 | Msa1435920:intron | 10.0% |
| !! | ACAAAAAAAAAAAGATTAAA+TGG | + | tig0027814:49360-49379 | Msa1435920:intron | 10.0% |
| !! | ATCTAAAAATATAAAATTAC+TGG | + | tig0027814:49972-49991 | Msa1435920:intron | 10.0% |
| !! | ATAGAATAAAAAATGAATTA+CGG | - | tig0027814:51168-51187 | Msa1435920:intergenic | 10.0% |
| !! | GTAAAAAAAAATATCATATT+AGG | - | tig0027814:51438-51457 | Msa1435920:intergenic | 10.0% |
| !! | AAACCTAAAAAAAATATTAT+AGG | + | tig0027814:51515-51534 | Msa1435920:intron | 10.0% |
| !! | ATTAATGAAAATAAAAAAGG+GGG | - | tig0027814:46152-46171 | Msa1435920:intergenic | 15.0% |
| !!! | TTTTCATTAATTTCATTTAG+GGG | + | tig0027814:46161-46180 | Msa1435920:intron | 15.0% |
| !!! | ATCAGATTTTTATTAAAATG+AGG | + | tig0027814:46229-46248 | Msa1435920:intron | 15.0% |
| !!! | AATACTTTAATTTAAGGTTA+TGG | - | tig0027814:46270-46289 | Msa1435920:intergenic | 15.0% |
| !!! | AAAAAACTGTTTTTATCAAA+TGG | + | tig0027814:46291-46310 | Msa1435920:intron | 15.0% |
| !!! | AAAAACTGTTTTTATCAAAT+GGG | + | tig0027814:46292-46311 | Msa1435920:intron | 15.0% |
| !! | TTTGTTCATATATAAGAAAT+AGG | + | tig0027814:46349-46368 | Msa1435920:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGGTAG+TGG | - | tig0027814:46472-46491 | Msa1435920:intergenic | 15.0% |
| !!! | TTGATAAAAACACTTATTTT+AGG | - | tig0027814:47099-47118 | Msa1435920:intergenic | 15.0% |
| !!! | TAACATAATTTTCTACAATT+TGG | - | tig0027814:47192-47211 | Msa1435920:intergenic | 15.0% |
| !! | TAAAATCATGTAAATAAATC+TGG | - | tig0027814:47286-47305 | Msa1435920:intergenic | 15.0% |
| !! | TGAATTATGATATAACATTA+TGG | + | tig0027814:48283-48302 | Msa1435920:intron | 15.0% |
| !!! | CATGATAATAATCTTATTTT+TGG | - | tig0027814:49489-49508 | Msa1435920:intergenic | 15.0% |
| !! | AAGATTATTATCATGTAAAT+AGG | + | tig0027814:49494-49513 | Msa1435920:intron | 15.0% |
| !! | AGATTATTATCATGTAAATA+GGG | + | tig0027814:49495-49514 | Msa1435920:intron | 15.0% |
| !!! | GTTATCATATCTTTTAAATA+GGG | + | tig0027814:49517-49536 | Msa1435920:intron | 15.0% |
| !! | AATAGATATTATATCATGTT+TGG | + | tig0027814:50018-50037 | Msa1435920:intron | 15.0% |
| !!! | GAAACTTTTTTATGATTAAA+CGG | + | tig0027814:50951-50970 | Msa1435920:intron | 15.0% |
| !!! | AGTCCTATAATATTTTTTTT+AGG | - | tig0027814:51521-51540 | Msa1435920:intergenic | 15.0% |
| !! | TTATACTAAATAACATATCA+TGG | - | tig0027814:52055-52074 | Msa1435920:intergenic | 15.0% |
| !! | TATAAAATATTGTCAAATAG+CGG | + | tig0027814:52070-52089 | Msa1435920:three_prime_UTR | 15.0% |
| !!! | TTTAGTTCATTTAACTGATT+AGG | + | tig0027814:46502-46521 | Msa1435920:intron | 20.0% |
| !!! | ATTTTACTTTGTACTAAAAG+AGG | - | tig0027814:46528-46547 | Msa1435920:intergenic | 20.0% |
| !!! | TCTTTTAGTACAAAGTAAAA+TGG | + | tig0027814:46527-46546 | Msa1435920:intron | 20.0% |
| !!! | TTTTTTCCAATTAAGATTAC+AGG | + | tig0027814:46800-46819 | Msa1435920:intron | 20.0% |
| !!! | TTTTTCCAATTAAGATTACA+GGG | + | tig0027814:46801-46820 | Msa1435920:intron | 20.0% |
| !!! | TATTTAGTCTTAAGATTGTT+TGG | + | tig0027814:47147-47166 | Msa1435920:intron | 20.0% |
| !!! | TAAAATTTTCTACAGATGAA+AGG | - | tig0027814:47236-47255 | Msa1435920:intergenic | 20.0% |
| !! | AATTTAAGAATAACAATTCC+TGG | + | tig0027814:47352-47371 | Msa1435920:intron | 20.0% |
| !! | CATAATTCATAAACCATATT+TGG | - | tig0027814:48272-48291 | Msa1435920:intergenic | 20.0% |
| !! | GATGTAACTTTATCATAAAA+TGG | - | tig0027814:48681-48700 | Msa1435920:intergenic | 20.0% |
| !! | TATTTGAACGATATTTCAAT+AGG | - | tig0027814:49015-49034 | Msa1435920:intergenic | 20.0% |
| !!! | GATAATAATCTTATTTTTGG+TGG | - | tig0027814:49486-49505 | Msa1435920:intergenic | 20.0% |
| !!! | GGTTATCATATCTTTTAAAT+AGG | + | tig0027814:49516-49535 | Msa1435920:intron | 20.0% |
| !!! | ACAAAATACTTTAGAGAATA+TGG | + | tig0027814:49678-49697 | Msa1435920:intron | 20.0% |
| !! | AATGTCATATAATAACTACT+TGG | + | tig0027814:50121-50140 | Msa1435920:CDS | 20.0% |
| !! | TAAACACTATAATCTTTCTT+AGG | - | tig0027814:50461-50480 | Msa1435920:intergenic | 20.0% |
| !!! | GAAATTTAAAATGTTACCTA+GGG | - | tig0027814:50502-50521 | Msa1435920:intergenic | 20.0% |
| !!! | AACATTTTAAATTTCCATCT+TGG | + | tig0027814:50507-50526 | Msa1435920:intron | 20.0% |
| !!! | TTGTATAATAGTTTTTTCGT+TGG | + | tig0027814:51469-51488 | Msa1435920:intron | 20.0% |
| !!! | ATTTGCAATTATTTTCTGAT+AGG | - | tig0027814:51585-51604 | Msa1435920:intergenic | 20.0% |
| !!! | ATTTTGAAATGTGTATGTTC+AGG | + | tig0027814:46025-46044 | Msa1435920:intron | 25.0% |
| ! | AGTTATACTTAGATTCTGTT+TGG | + | tig0027814:46605-46624 | Msa1435920:intron | 25.0% |
| ! | ATAACTTTGTACTGTTTATC+TGG | + | tig0027814:46667-46686 | Msa1435920:intron | 25.0% |
| ! | ACTGTTTATCTGGTAAAAAA+TGG | + | tig0027814:46677-46696 | Msa1435920:intron | 25.0% |
| ! | GTAGTGTTTGGTATAATTAA+CGG | + | tig0027814:46718-46737 | Msa1435920:intron | 25.0% |
| !! | TTTTCCAATTAAGATTACAG+GGG | + | tig0027814:46802-46821 | Msa1435920:intron | 25.0% |
| ! | TTAAGATTGTGAGAAAATGA+CGG | + | tig0027814:46909-46928 | Msa1435920:intron | 25.0% |
| ! | ATGACTAAAAAAGATCCATT+TGG | - | tig0027814:46938-46957 | Msa1435920:intergenic | 25.0% |
| !!! | AATGGATCTTTTTTAGTCAT+AGG | + | tig0027814:46938-46957 | Msa1435920:intron | 25.0% |
| !!! | TTAGTACTGTTTTTTCTCAA+AGG | + | tig0027814:47007-47026 | Msa1435920:intron | 25.0% |
| !! | ACTAAATATGAAGAGAGTTT+TGG | - | tig0027814:47135-47154 | Msa1435920:intergenic | 25.0% |
| ! | AGGGTAGTTATTACAATTAA+TGG | + | tig0027814:47476-47495 | Msa1435920:intron | 25.0% |
| !! | TTTCGATCAGTGTTATTAAA+TGG | + | tig0027814:47805-47824 | Msa1435920:intron | 25.0% |
| ! | GTTGAAATCTTGTACAAATT+CGG | + | tig0027814:48033-48052 | Msa1435920:intron | 25.0% |
| ! | TACAGTCATTGTTAGTAATT+GGG | - | tig0027814:48075-48094 | Msa1435920:intergenic | 25.0% |
| ! | TTACAGTCATTGTTAGTAAT+TGG | - | tig0027814:48076-48095 | Msa1435920:intergenic | 25.0% |
| ! | ATTACTAACAATGACTGTAA+TGG | + | tig0027814:48076-48095 | Msa1435920:intron | 25.0% |
| ! | AGATTTAGTGATTAATGAGT+TGG | + | tig0027814:48244-48263 | Msa1435920:intron | 25.0% |
| ! | TATGATAAAGTTACATCAAC+TGG | + | tig0027814:48684-48703 | Msa1435920:CDS | 25.0% |
| ! | CATTAAAAAGTTGCGTAAAA+TGG | + | tig0027814:48833-48852 | Msa1435920:intron | 25.0% |
| !!! | CTTTTTAAGAAATACCAGAA+GGG | - | tig0027814:48876-48895 | Msa1435920:intergenic | 25.0% |
| !!! | ACTTTTTAAGAAATACCAGA+AGG | - | tig0027814:48877-48896 | Msa1435920:intergenic | 25.0% |
| !! | TATTCTTTTCCAGTGTTTAA+TGG | - | tig0027814:48935-48954 | Msa1435920:intergenic | 25.0% |
| ! | ACTAGAATATAATCCTAGAT+TGG | + | tig0027814:49291-49310 | Msa1435920:intron | 25.0% |
| ! | CATTCAACATGTCATTATTA+TGG | + | tig0027814:49648-49667 | Msa1435920:intron | 25.0% |
| !! | GTCTTATCTCTTTTTAATGT+AGG | - | tig0027814:50366-50385 | Msa1435920:intergenic | 25.0% |
| ! | ATTCTATATAAACTCTTCTC+AGG | - | tig0027814:50388-50407 | Msa1435920:intergenic | 25.0% |
| ! | TATAGTGTTTATGAAGATTG+AGG | + | tig0027814:50470-50489 | Msa1435920:intron | 25.0% |
| !! | GGAAATTTAAAATGTTACCT+AGG | - | tig0027814:50503-50522 | Msa1435920:intergenic | 25.0% |
| !!! | GCTTGTTTTTTTCTATGTTT+AGG | + | tig0027814:50560-50579 | Msa1435920:intron | 25.0% |
| !!! | ACTTTTTTATGATTAAACGG+AGG | + | tig0027814:50954-50973 | Msa1435920:intron | 25.0% |
| !!! | TTCTTTTGTTATCTTTTTGC+AGG | + | tig0027814:50997-51016 | Msa1435920:intron | 25.0% |
| ! | GATAGATTAATGATTCTTCT+CGG | + | tig0027814:51211-51230 | Msa1435920:intron | 25.0% |
| !!! | GATGGATTAATGATTCTTTT+TGG | + | tig0027814:51277-51296 | Msa1435920:intron | 25.0% |
| ! | ATAAATTGCTATACCAGAAA+AGG | + | tig0027814:51334-51353 | Msa1435920:intron | 25.0% |
| !! | AAAAATATGTAAGCCTTTTC+TGG | - | tig0027814:51350-51369 | Msa1435920:intergenic | 25.0% |
| !! | AGAAAAGGCTTACATATTTT+TGG | + | tig0027814:51349-51368 | Msa1435920:intron | 25.0% |
| ! | CAAAAAAATAGGGACTAAAA+CGG | - | tig0027814:51396-51415 | Msa1435920:intergenic | 25.0% |
| ! | AAACAAGGACCAAAAAAATA+GGG | - | tig0027814:51406-51425 | Msa1435920:intergenic | 25.0% |
| TAGGAAATTCATAACAGACT+AGG | + | tig0027814:46368-46387 | Msa1435920:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | tig0027814:46428-46447 | Msa1435920:intron | 30.0% | |
| !!! | TTTTTTTTTTGGTAGTGGCT+GGG | - | tig0027814:46467-46486 | Msa1435920:intergenic | 30.0% |
| !!! | TTTTTTTTTTTGGTAGTGGC+TGG | - | tig0027814:46468-46487 | Msa1435920:intergenic | 30.0% |
| !! | AGCACATAATACAAGTTGAT+CGG | - | tig0027814:46560-46579 | Msa1435920:intergenic | 30.0% |
| !!! | GCTATTGATTTTGTAGTGTT+TGG | + | tig0027814:46706-46725 | Msa1435920:intron | 30.0% |
| TTTACCCCTGTAATCTTAAT+TGG | - | tig0027814:46809-46828 | Msa1435920:intergenic | 30.0% | |
| AAGACACATACTTGAGTTTA+TGG | - | tig0027814:46974-46993 | Msa1435920:intergenic | 30.0% | |
| !! | ACTGAATCACTTATTTCTAC+TGG | - | tig0027814:47034-47053 | Msa1435920:intergenic | 30.0% |
| !!! | ACACTTATTTTAGGTGCAAA+TGG | - | tig0027814:47090-47109 | Msa1435920:intergenic | 30.0% |
| !!! | AAAATTTTAGTTCCAGTCCA+GGG | + | tig0027814:47247-47266 | Msa1435920:intron | 30.0% |
| GTAATAACTACCCTAATTCT+TGG | - | tig0027814:47470-47489 | Msa1435920:intergenic | 30.0% | |
| AGATTCACTATTGTTTCAAC+TGG | + | tig0027814:47591-47610 | Msa1435920:intron | 30.0% | |
| AAAGTAAACTCACCATTTCA+GGG | - | tig0027814:47683-47702 | Msa1435920:intergenic | 30.0% | |
| AAAAGTAAACTCACCATTTC+AGG | - | tig0027814:47684-47703 | Msa1435920:intergenic | 30.0% | |
| ! | TCTTGGATTTTGTATACCAT+CGG | + | tig0027814:47732-47751 | Msa1435920:intron | 30.0% |
| ATCACTTTACAAATTGGCTA+TGG | - | tig0027814:47863-47882 | Msa1435920:intergenic | 30.0% | |
| ! | ATCAGAATCAGTGTTTTCAA+CGG | - | tig0027814:47955-47974 | Msa1435920:intergenic | 30.0% |
| ! | AATTGGGTTAAAAAGTACAC+AGG | - | tig0027814:48059-48078 | Msa1435920:intergenic | 30.0% |
| ! | GAGCTTCAATATGATGTTTT+TGG | - | tig0027814:48177-48196 | Msa1435920:intergenic | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | tig0027814:48256-48275 | Msa1435920:intron | 30.0% |
| ! | TGCTAAAAGTTTTCCATTTC+AGG | + | tig0027814:48624-48643 | Msa1435920:intron | 30.0% |
| GGAATTGAAAACATTGACAT+CGG | + | tig0027814:48726-48745 | Msa1435920:CDS | 30.0% | |
| CACTGAAAAAACATCATTGT+TGG | + | tig0027814:48902-48921 | Msa1435920:intron | 30.0% | |
| GGTTAAATACCATTAAACAC+TGG | + | tig0027814:48923-48942 | Msa1435920:intron | 30.0% | |
| ! | TCCTTTAAGAAATTCCAGAA+GGG | - | tig0027814:49111-49130 | Msa1435920:intergenic | 30.0% |
| ! | TTCCTTTAAGAAATTCCAGA+AGG | - | tig0027814:49112-49131 | Msa1435920:intergenic | 30.0% |
| TCTACTCTTAGCAGATTAAA+TGG | + | tig0027814:49324-49343 | Msa1435920:intron | 30.0% | |
| !!! | TACTGGTCTTGCTTATTTTT+TGG | - | tig0027814:49461-49480 | Msa1435920:intergenic | 30.0% |
| TCAACATGTCATTATTATGG+AGG | + | tig0027814:49651-49670 | Msa1435920:intron | 30.0% | |
| !!! | AGAGAATTTTTGAGTGAAAG+AGG | - | tig0027814:49820-49839 | Msa1435920:intergenic | 30.0% |
| !!! | CGACTTTTTTCAATTGACTT+GGG | - | tig0027814:50340-50359 | Msa1435920:intergenic | 30.0% |
| !!! | TCGACTTTTTTCAATTGACT+TGG | - | tig0027814:50341-50360 | Msa1435920:intergenic | 30.0% |
| !!! | ATCTTTCTTAGGTTTTGACT+AGG | - | tig0027814:50450-50469 | Msa1435920:intergenic | 30.0% |
| AAGGATGTTCTATGAAATAG+TGG | + | tig0027814:50632-50651 | Msa1435920:CDS | 30.0% | |
| ! | TTTTTATGATTAAACGGAGG+TGG | + | tig0027814:50957-50976 | Msa1435920:intron | 30.0% |
| GACAATTGTATGTTAGGTAT+GGG | + | tig0027814:51019-51038 | Msa1435920:CDS | 30.0% | |
| AGAGTTTAAGAATAGCAATG+AGG | + | tig0027814:51065-51084 | Msa1435920:CDS | 30.0% | |
| GTTACTCAATGTTATCTTCT+CGG | - | tig0027814:51242-51261 | Msa1435920:intergenic | 30.0% | |
| GAGAAGATAACATTGAGTAA+CGG | + | tig0027814:51241-51260 | Msa1435920:intron | 30.0% | |
| !!! | CGTTTTAGTCCCTATTTTTT+TGG | + | tig0027814:51394-51413 | Msa1435920:intron | 30.0% |
| CAAACAAGGACCAAAAAAAT+AGG | - | tig0027814:51407-51426 | Msa1435920:intergenic | 30.0% | |
| !!! | CTATTTTTTTGGTCCTTGTT+TGG | + | tig0027814:51405-51424 | Msa1435920:intron | 30.0% |
| TAAATAGTCAAGACACATTC+TGG | - | tig0027814:51685-51704 | Msa1435920:intergenic | 30.0% | |
| TTGACTATTTATGAACAGCT+TGG | + | tig0027814:51694-51713 | Msa1435920:intron | 30.0% | |
| !!! | GCACTGATCATTTTTGTTTT+AGG | + | tig0027814:51857-51876 | Msa1435920:exon | 30.0% |
| !!! | ACCTATTTTTGACATCAAGT+AGG | + | tig0027814:51919-51938 | Msa1435920:intron | 30.0% |
| ACCTACTTGATGTCAAAAAT+AGG | - | tig0027814:51923-51942 | Msa1435920:intergenic | 30.0% | |
| TTATCAGCGTTGTTAAATAG+CGG | + | tig0027814:51967-51986 | Msa1435920:intron | 30.0% | |
| TTGTTAAATAGCGGCTATAA+TGG | + | tig0027814:51976-51995 | Msa1435920:intron | 30.0% | |
| AGAAGGGAACAAAGAATGTT+TGG | + | tig0027814:45834-45853 | Msa1435920:exon | 35.0% | |
| TCATCATCTTCCAACTACTT+GGG | + | tig0027814:45938-45957 | Msa1435920:CDS | 35.0% | |
| AAACTACATACCCAAGTAGT+TGG | - | tig0027814:45951-45970 | Msa1435920:intergenic | 35.0% | |
| ATTCCTATCAAACCTATAGC+TGG | + | tig0027814:46077-46096 | Msa1435920:CDS | 35.0% | |
| TTCCTATCAAACCTATAGCT+GGG | + | tig0027814:46078-46097 | Msa1435920:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | tig0027814:46433-46452 | Msa1435920:intron | 35.0% | |
| !!! | TTTTTTTTTGGTAGTGGCTG+GGG | - | tig0027814:46466-46485 | Msa1435920:intergenic | 35.0% |
| ! | GTTGATGAGTTAGCTTATAG+CGG | + | tig0027814:46644-46663 | Msa1435920:intron | 35.0% |
| AGAAAATGACGGTTACCAAA+TGG | + | tig0027814:46920-46939 | Msa1435920:intron | 35.0% | |
| AACAGTACTAAGTGTCTGTT+TGG | - | tig0027814:46998-47017 | Msa1435920:intergenic | 35.0% | |
| !!! | GAAAATTTTAGTTCCAGTCC+AGG | + | tig0027814:47246-47265 | Msa1435920:intron | 35.0% |
| GAATAACAATTCCTGGCATT+TGG | + | tig0027814:47359-47378 | Msa1435920:intron | 35.0% | |
| TTCACTATTGTTTCAACTGG+AGG | + | tig0027814:47594-47613 | Msa1435920:CDS | 35.0% | |
| TATCTCTAGATTTGTACCGA+TGG | - | tig0027814:47751-47770 | Msa1435920:intergenic | 35.0% | |
| !!! | CGTGGAAGATTTTTTGAGAA+TGG | + | tig0027814:47837-47856 | Msa1435920:intron | 35.0% |
| GCAGGAATCACTTTACAAAT+TGG | - | tig0027814:47869-47888 | Msa1435920:intergenic | 35.0% | |
| !!! | GTGTTTCTATGACGGTTTTT+TGG | + | tig0027814:47905-47924 | Msa1435920:intron | 35.0% |
| GGATAACAGAATATGGCAAA+AGG | - | tig0027814:47931-47950 | Msa1435920:intergenic | 35.0% | |
| TCAAAACGCAAGGCTTATTA+TGG | - | tig0027814:48012-48031 | Msa1435920:intergenic | 35.0% | |
| GATTTCAACATCAAAACGCA+AGG | - | tig0027814:48022-48041 | Msa1435920:intergenic | 35.0% | |
| GTTATGTTATCAGCTCTGTT+AGG | + | tig0027814:48219-48238 | Msa1435920:intron | 35.0% | |
| ! | TGACAACACTGGTTATAACA+GGG | - | tig0027814:48389-48408 | Msa1435920:intergenic | 35.0% |
| ! | TTGACAACACTGGTTATAAC+AGG | - | tig0027814:48390-48409 | Msa1435920:intergenic | 35.0% |
| !! | AAGTTGCTATTTGACAACAC+TGG | - | tig0027814:48400-48419 | Msa1435920:intergenic | 35.0% |
| CAATTCGTTCAAATTCTGCT+AGG | - | tig0027814:48426-48445 | Msa1435920:intergenic | 35.0% | |
| TTATGACCAGCGTTATCAAT+CGG | - | tig0027814:48554-48573 | Msa1435920:intergenic | 35.0% | |
| !! | AACATCAAAAGTGCCTGAAA+TGG | - | tig0027814:48640-48659 | Msa1435920:intergenic | 35.0% |
| GATAAAGTTACATCAACTGG+AGG | + | tig0027814:48687-48706 | Msa1435920:CDS | 35.0% | |
| ATTGAAAACATTGACATCGG+TGG | + | tig0027814:48729-48748 | Msa1435920:CDS | 35.0% | |
| ! | GCAGAATCACAAAGATGTTT+TGG | + | tig0027814:49058-49077 | Msa1435920:intron | 35.0% |
| !!! | TCACAAAGATGTTTTGGTAG+TGG | + | tig0027814:49064-49083 | Msa1435920:CDS | 35.0% |
| TTTAAGAAATTCCAGAAGGG+CGG | - | tig0027814:49108-49127 | Msa1435920:intergenic | 35.0% | |
| ! | AGAACATGCTTTTCCAATCT+AGG | - | tig0027814:49307-49326 | Msa1435920:intergenic | 35.0% |
| !!! | TCTTATTTTTGGTGGTCTAC+TGG | - | tig0027814:49478-49497 | Msa1435920:intergenic | 35.0% |
| ACAACAGAGACTCTTTAAGT+AGG | - | tig0027814:49581-49600 | Msa1435920:intergenic | 35.0% | |
| CTCAAAAATTCTCTCCGTTA+TGG | + | tig0027814:49826-49845 | Msa1435920:CDS | 35.0% | |
| ! | GATGAGGATTTTCACCATAA+CGG | - | tig0027814:49843-49862 | Msa1435920:intergenic | 35.0% |
| ! | TAGAATGCAGCTTTTTGATG+AGG | - | tig0027814:49859-49878 | Msa1435920:intergenic | 35.0% |
| TAATGCCATAACATGAATGC+AGG | + | tig0027814:50097-50116 | Msa1435920:intron | 35.0% | |
| CATTTCCTGCATTCATGTTA+TGG | - | tig0027814:50105-50124 | Msa1435920:intergenic | 35.0% | |
| !! | TTTCAATGTGGAAGTTGATG+AGG | + | tig0027814:50307-50326 | Msa1435920:CDS | 35.0% |
| TTTAAATTTCCATCTTGGCG+AGG | + | tig0027814:50512-50531 | Msa1435920:intron | 35.0% | |
| ! | CTATGTTTAGGTTCTTGCTA+AGG | + | tig0027814:50572-50591 | Msa1435920:intron | 35.0% |
| GAAGCAAAAAAGAATGAAGC+AGG | + | tig0027814:50723-50742 | Msa1435920:CDS | 35.0% | |
| CAATGCTATTGTGATAGCTA+AGG | + | tig0027814:50908-50927 | Msa1435920:CDS | 35.0% | |
| TTGCAGGACAATTGTATGTT+AGG | + | tig0027814:51013-51032 | Msa1435920:intron | 35.0% | |
| GGACAATTGTATGTTAGGTA+TGG | + | tig0027814:51018-51037 | Msa1435920:intron | 35.0% | |
| GCTATTAACACTTACCAAAG+GGG | - | tig0027814:51141-51160 | Msa1435920:intergenic | 35.0% | |
| CGCTATTAACACTTACCAAA+GGG | - | tig0027814:51142-51161 | Msa1435920:intergenic | 35.0% | |
| TCGCTATTAACACTTACCAA+AGG | - | tig0027814:51143-51162 | Msa1435920:intergenic | 35.0% | |
| TCTATGTTGTAAAGACGACT+TGG | + | tig0027814:51183-51202 | Msa1435920:intron | 35.0% | |
| !! | TTGTAAAGACGACTTGGTTA+TGG | + | tig0027814:51189-51208 | Msa1435920:intron | 35.0% |
| AACATTGAGTAACGGTAAGT+TGG | + | tig0027814:51249-51268 | Msa1435920:intron | 35.0% | |
| CGGAAAAAGAGTTCATTACA+AGG | - | tig0027814:51376-51395 | Msa1435920:intergenic | 35.0% | |
| ATTAGGGACTAAACCAAACA+AGG | - | tig0027814:51421-51440 | Msa1435920:intergenic | 35.0% | |
| GTAGACTGTTGCAATAAGTA+TGG | + | tig0027814:51798-51817 | Msa1435920:CDS | 35.0% | |
| CACTACTCTTTACAAATGTG+AGG | + | tig0027814:51826-51845 | Msa1435920:CDS | 35.0% | |
| CGAGAAACAGAGAAGAAGAA+GGG | + | tig0027814:45818-45837 | Msa1435920:five_prime_UTR | 40.0% | |
| GAGAGAAGAAGGAGAGTAAA+GGG | - | tig0027814:45895-45914 | Msa1435920:intergenic | 40.0% | |
| TGAGAGAAGAAGGAGAGTAA+AGG | - | tig0027814:45896-45915 | Msa1435920:intergenic | 40.0% | |
| TGTTTAGCAGTGAGAGAAGA+AGG | - | tig0027814:45906-45925 | Msa1435920:intergenic | 40.0% | |
| CTCATCATCTTCCAACTACT+TGG | + | tig0027814:45937-45956 | Msa1435920:CDS | 40.0% | |
| ATTGTATGAGTCCCAGCTAT+AGG | - | tig0027814:46092-46111 | Msa1435920:intergenic | 40.0% | |
| ATGTCTGCTTCATCTACTCA+TGG | + | tig0027814:46110-46129 | Msa1435920:CDS | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | tig0027814:46434-46453 | Msa1435920:intron | 40.0% | |
| GTGTTCTGTTGCTATGAAAC+AGG | + | tig0027814:47381-47400 | Msa1435920:intron | 40.0% | |
| GATATCGTTGTCAGACAAGA+AGG | + | tig0027814:47419-47438 | Msa1435920:CDS | 40.0% | |
| AAGAAGGATCTCGCATTTGT+TGG | + | tig0027814:47435-47454 | Msa1435920:CDS | 40.0% | |
| ! | GATCTCGCATTTGTTGGAAA+CGG | + | tig0027814:47441-47460 | Msa1435920:CDS | 40.0% |
| ! | GAAACGGACTCCAAGAATTA+GGG | + | tig0027814:47457-47476 | Msa1435920:CDS | 40.0% |
| ! | GTGTTATTAAATGGCAGCCA+TGG | + | tig0027814:47814-47833 | Msa1435920:intron | 40.0% |
| TCAAAAAATCTTCCACGCCA+TGG | - | tig0027814:47834-47853 | Msa1435920:intergenic | 40.0% | |
| TGTAAAGTGATTCCTGCCAT+TGG | + | tig0027814:47872-47891 | Msa1435920:intron | 40.0% | |
| GTCATAGAAACACACCATTG+CGG | - | tig0027814:47898-47917 | Msa1435920:intergenic | 40.0% | |
| ! | GCAATGGTGTGTTTCTATGA+CGG | + | tig0027814:47897-47916 | Msa1435920:intron | 40.0% |
| CAACGGTGGATAACAGAATA+TGG | - | tig0027814:47938-47957 | Msa1435920:intergenic | 40.0% | |
| ! | AGAATCAGTGTTTTCAACGG+TGG | - | tig0027814:47952-47971 | Msa1435920:intergenic | 40.0% |
| GGATACCTCCATGTATGTTA+GGG | - | tig0027814:48141-48160 | Msa1435920:intergenic | 40.0% | |
| AGGATACCTCCATGTATGTT+AGG | - | tig0027814:48142-48161 | Msa1435920:intergenic | 40.0% | |
| ATTGAAGCTCTCAGTACACA+TGG | + | tig0027814:48187-48206 | Msa1435920:CDS | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | tig0027814:48332-48351 | Msa1435920:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | tig0027814:48333-48352 | Msa1435920:intergenic | 40.0% |
| AAATAGCGTATCGCAGAACA+AGG | - | tig0027814:48450-48469 | Msa1435920:intergenic | 40.0% | |
| GTTGTCAAATAGCAGCATAG+CGG | + | tig0027814:48480-48499 | Msa1435920:intron | 40.0% | |
| !! | TGATATCCGATTGATAACGC+TGG | + | tig0027814:48545-48564 | Msa1435920:intron | 40.0% |
| ! | TTCAGGCACTTTTGATGTTG+TGG | + | tig0027814:48641-48660 | Msa1435920:intron | 40.0% |
| !! | AACTGGAGGCATTGAATTTG+AGG | + | tig0027814:48701-48720 | Msa1435920:CDS | 40.0% |
| TAAGAAATACCAGAAGGGCA+GGG | - | tig0027814:48871-48890 | Msa1435920:intergenic | 40.0% | |
| TTAAGAAATACCAGAAGGGC+AGG | - | tig0027814:48872-48891 | Msa1435920:intergenic | 40.0% | |
| TTAAGAAATTCCAGAAGGGC+GGG | - | tig0027814:49107-49126 | Msa1435920:intergenic | 40.0% | |
| !! | GCCCTTCTGGAATTTCTTAA+AGG | + | tig0027814:49107-49126 | Msa1435920:CDS | 40.0% |
| ATGATTCTGCAGTATCTGAG+TGG | + | tig0027814:49192-49211 | Msa1435920:CDS | 40.0% | |
| TGTTGACAAAAGACTTGCAG+AGG | + | tig0027814:49879-49898 | Msa1435920:CDS | 40.0% | |
| TGCTTCACAACTACACATGT+GGG | - | tig0027814:50188-50207 | Msa1435920:intergenic | 40.0% | |
| ATGCTTCACAACTACACATG+TGG | - | tig0027814:50189-50208 | Msa1435920:intergenic | 40.0% | |
| GTGAAGCATACTAATCCTTG+CGG | + | tig0027814:50200-50219 | Msa1435920:CDS | 40.0% | |
| ! | AGCTTTAACAGCTAGTCTGT+AGG | - | tig0027814:50255-50274 | Msa1435920:intergenic | 40.0% |
| CGGAATTGTAGCTTTCAATG+TGG | + | tig0027814:50295-50314 | Msa1435920:CDS | 40.0% | |
| AATTTAGAAGCCCAACCGAT+GGG | + | tig0027814:50604-50623 | Msa1435920:CDS | 40.0% | |
| AAGCTTTCACTCAGACAAGT+TGG | + | tig0027814:50747-50766 | Msa1435920:CDS | 40.0% | |
| ACATTGAACTTGATGTCGGA+TGG | - | tig0027814:50810-50829 | Msa1435920:intergenic | 40.0% | |
| ATCCGACATCAAGTTCAATG+TGG | + | tig0027814:50809-50828 | Msa1435920:CDS | 40.0% | |
| CACCACATTGAACTTGATGT+CGG | - | tig0027814:50814-50833 | Msa1435920:intergenic | 40.0% | |
| CATCAAGTTCAATGTGGTGT+CGG | + | tig0027814:50815-50834 | Msa1435920:CDS | 40.0% | |
| TGTATGTTAGGTATGGGAAG+CGG | + | tig0027814:51025-51044 | Msa1435920:CDS | 40.0% | |
| CTTAAACTCTCCACACGATT+CGG | - | tig0027814:51055-51074 | Msa1435920:intergenic | 40.0% | |
| AGAATAGCAATGAGGAAAGC+TGG | + | tig0027814:51073-51092 | Msa1435920:CDS | 40.0% | |
| AAAGCTGGAGCTGATGTTAA+AGG | + | tig0027814:51088-51107 | Msa1435920:CDS | 40.0% | |
| ! | TTGGAGTCTTGTATCATGCA+GGG | + | tig0027814:51488-51507 | Msa1435920:intron | 40.0% |
| ! | TGGAAGAAGCATGTGAAAGT+GGG | + | tig0027814:51727-51746 | Msa1435920:CDS | 40.0% |
| !! | ATTGGTGTTATTGCAGAACC+AGG | + | tig0027814:51750-51769 | Msa1435920:CDS | 40.0% |
| TGATCTCTTATACTACCACC+TGG | - | tig0027814:51771-51790 | Msa1435920:intergenic | 40.0% | |
| AGGTGGTAGTATAAGAGATC+AGG | + | tig0027814:51770-51789 | Msa1435920:CDS | 40.0% | |
| ! | TTACAAATGTGAGGCACTTC+AGG | + | tig0027814:51835-51854 | Msa1435920:CDS | 40.0% |
| TTGACATCAAGTAGGTCGTA+AGG | + | tig0027814:51927-51946 | Msa1435920:intron | 40.0% | |
| GCGAGAAACAGAGAAGAAGA+AGG | + | tig0027814:45817-45836 | Msa1435920:five_prime_UTR | 45.0% | |
| AAAGGGTTGCACAGAGAACA+CGG | - | tig0027814:45878-45897 | Msa1435920:intergenic | 45.0% | |
| CTTCATCTTCACAGCGATTC+AGG | + | tig0027814:46051-46070 | Msa1435920:CDS | 45.0% | |
| GTCCCAGCTATAGGTTTGAT+AGG | - | tig0027814:46083-46102 | Msa1435920:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGTT+GGG | + | tig0027814:46406-46425 | Msa1435920:intron | 45.0% | |
| CAGGGGTAAAATTGAGAGAG+AGG | + | tig0027814:46819-46838 | Msa1435920:intron | 45.0% | |
| ! | GGAAACGGACTCCAAGAATT+AGG | + | tig0027814:47456-47475 | Msa1435920:CDS | 45.0% |
| GCTTACACAGTTCCCTGAAA+TGG | + | tig0027814:47668-47687 | Msa1435920:CDS | 45.0% | |
| TCCTTCTCGAAGTCTCATCT+TGG | + | tig0027814:47715-47734 | Msa1435920:intron | 45.0% | |
| TCCAAGATGAGACTTCGAGA+AGG | - | tig0027814:47719-47738 | Msa1435920:intergenic | 45.0% | |
| ! | GGCTTTTCTACACAGCTTGA+CGG | + | tig0027814:48097-48116 | Msa1435920:intron | 45.0% |
| ACTCTGCACCCTAACATACA+TGG | + | tig0027814:48130-48149 | Msa1435920:CDS | 45.0% | |
| !!! | GTTTTTGGTCTCTTCGAGCA+AGG | - | tig0027814:48162-48181 | Msa1435920:intergenic | 45.0% |
| GCTCTCAGTACACATGGAAT+TGG | + | tig0027814:48193-48212 | Msa1435920:CDS | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | tig0027814:48334-48353 | Msa1435920:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | + | tig0027814:48331-48350 | Msa1435920:intron | 45.0% | |
| ! | AGGCACTTTTGATGTTGTGG+TGG | + | tig0027814:48644-48663 | Msa1435920:intron | 45.0% |
| !! | GGAGGCATTGAATTTGAGGA+TGG | + | tig0027814:48705-48724 | Msa1435920:CDS | 45.0% |
| TAAGAAATTCCAGAAGGGCG+GGG | - | tig0027814:49106-49125 | Msa1435920:intergenic | 45.0% | |
| GAAACCAAGACGAACAGTTC+AGG | + | tig0027814:49129-49148 | Msa1435920:CDS | 45.0% | |
| TTAGCCTGAACTGTTCGTCT+TGG | - | tig0027814:49136-49155 | Msa1435920:intergenic | 45.0% | |
| AGTTCAGGCTAAAGCTTGCA+TGG | + | tig0027814:49144-49163 | Msa1435920:CDS | 45.0% | |
| !! | GAAAGAGGCACTGTCAAACT+CGG | - | tig0027814:49805-49824 | Msa1435920:intergenic | 45.0% |
| AGCTATCCAACACCATGGAA+AGG | + | tig0027814:49924-49943 | Msa1435920:CDS | 45.0% | |
| GCTTCACAACTACACATGTG+GGG | - | tig0027814:50187-50206 | Msa1435920:intergenic | 45.0% | |
| AGCTTCACGCGATGATATTC+TGG | + | tig0027814:50226-50245 | Msa1435920:CDS | 45.0% | |
| !! | CTCATTCTCACTGGCTTGTA+AGG | - | tig0027814:50422-50441 | Msa1435920:intergenic | 45.0% |
| CAAGCCAGTGAGAATGAGTT+AGG | + | tig0027814:50424-50443 | Msa1435920:intron | 45.0% | |
| TAGGCCTAACTCATTCTCAC+TGG | - | tig0027814:50431-50450 | Msa1435920:intergenic | 45.0% | |
| AAGATTGAGGCTCTTTCCCT+AGG | + | tig0027814:50483-50502 | Msa1435920:intron | 45.0% | |
| GAATTTAGAAGCCCAACCGA+TGG | + | tig0027814:50603-50622 | Msa1435920:CDS | 45.0% | |
| ATTTAGAAGCCCAACCGATG+GGG | + | tig0027814:50605-50624 | Msa1435920:CDS | 45.0% | |
| AGTCCCTTCTCTGTATAGCT+GGG | - | tig0027814:50663-50682 | Msa1435920:intergenic | 45.0% | |
| AAGTCCCTTCTCTGTATAGC+TGG | - | tig0027814:50664-50683 | Msa1435920:intergenic | 45.0% | |
| AAGGGACTTGAGATTCTTCG+TGG | + | tig0027814:50675-50694 | Msa1435920:CDS | 45.0% | |
| GTGGAAAGTCGAAGACTCTA+AGG | + | tig0027814:50694-50713 | Msa1435920:CDS | 45.0% | |
| ! | CTTTCACTCAGACAAGTTGG+TGG | + | tig0027814:50750-50769 | Msa1435920:CDS | 45.0% |
| !! | GAAGAAAGCATCACTAGCCA+AGG | - | tig0027814:51119-51138 | Msa1435920:intergenic | 45.0% |
| AGTGATGCTTTCTTCCCCTT+TGG | + | tig0027814:51124-51143 | Msa1435920:CDS | 45.0% | |
| !! | GAGTAACGGTAAGTTGGTTG+TGG | + | tig0027814:51255-51274 | Msa1435920:intron | 45.0% |
| !! | AACGGTAAGTTGGTTGTGGA+TGG | + | tig0027814:51259-51278 | Msa1435920:intron | 45.0% |
| ! | GTTGGAGTCTTGTATCATGC+AGG | + | tig0027814:51487-51506 | Msa1435920:intron | 45.0% |
| AACAGCTTGGAAAGATGCTG+TGG | + | tig0027814:51707-51726 | Msa1435920:intron | 45.0% | |
| ! | GTGGAAGAAGCATGTGAAAG+TGG | + | tig0027814:51726-51745 | Msa1435920:CDS | 45.0% |
| GAAGCATGTGAAAGTGGGAT+TGG | + | tig0027814:51732-51751 | Msa1435920:CDS | 45.0% | |
| GTGCTACAACATAGACGTAG+AGG | + | tig0027814:52006-52025 | Msa1435920:intron | 45.0% | |
| !! | AAATTAATGAAAATAAAAAA+GGG | - | tig0027814:46154-46173 | Msa1435920:intergenic | 5.0% |
| !!! | TTTTTGTTAATTTAATTTTA+GGG | - | tig0027814:46210-46229 | Msa1435920:intergenic | 5.0% |
| !!! | ATTTTTGTTAATTTAATTTT+AGG | - | tig0027814:46211-46230 | Msa1435920:intergenic | 5.0% |
| !!! | TTTTTTAATACTTTAATTTA+AGG | - | tig0027814:46276-46295 | Msa1435920:intergenic | 5.0% |
| !! | TAAAAAAAAATATCATATTA+GGG | - | tig0027814:51437-51456 | Msa1435920:intergenic | 5.0% |
| !! | AATGAAAAATATTAAATTAT+AGG | + | tig0027814:51543-51562 | Msa1435920:intron | 5.0% |
| !! | ATGAAAAATATTAAATTATA+GGG | + | tig0027814:51544-51563 | Msa1435920:intron | 5.0% |
| AAGGGTTGCACAGAGAACAC+GGG | - | tig0027814:45877-45896 | Msa1435920:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | tig0027814:46405-46424 | Msa1435920:intron | 50.0% | |
| GCAACAGAACACCAAATGCC+AGG | - | tig0027814:47373-47392 | Msa1435920:intergenic | 50.0% | |
| TGGAGGAACAGCTTCTGCAT+TGG | + | tig0027814:47611-47630 | Msa1435920:CDS | 50.0% | |
| ATTAAATGGCAGCCATGGCG+TGG | + | tig0027814:47819-47838 | Msa1435920:intron | 50.0% | |
| AAACACACCATTGCGGCCAA+TGG | - | tig0027814:47891-47910 | Msa1435920:intergenic | 50.0% | |
| CTGCACCCTAACATACATGG+AGG | + | tig0027814:48133-48152 | Msa1435920:CDS | 50.0% | |
| !! | ACTAAGTGGGGTTGGCTACA+TGG | - | tig0027814:48320-48339 | Msa1435920:intergenic | 50.0% |
| ATGTAGCCAACCCCACTTAG+TGG | + | tig0027814:48319-48338 | Msa1435920:intron | 50.0% | |
| TGTAGCCAACCCCACTTAGT+GGG | + | tig0027814:48320-48339 | Msa1435920:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | - | tig0027814:48328-48347 | Msa1435920:intergenic | 50.0% | |
| CTTTGCAGCAGCTCGAATCA+TGG | - | tig0027814:48760-48779 | Msa1435920:intergenic | 50.0% | |
| CATGATTCGAGCTGCTGCAA+AGG | + | tig0027814:48758-48777 | Msa1435920:CDS | 50.0% | |
| AGAAGATTACCCTGCCCTTC+TGG | + | tig0027814:48859-48878 | Msa1435920:intron | 50.0% | |
| AGACTTGCAGAGGTCAATGC+TGG | + | tig0027814:49889-49908 | Msa1435920:CDS | 50.0% | |
| GCTACAGCTATCCAACACCA+TGG | + | tig0027814:49919-49938 | Msa1435920:CDS | 50.0% | |
| ACTTGGATGCTGATGCTGCT+TGG | + | tig0027814:50138-50157 | Msa1435920:CDS | 50.0% | |
| GCTGATCCTGTCAGTGCATT+TGG | + | tig0027814:50272-50291 | Msa1435920:CDS | 50.0% | |
| GATCCTGTCAGTGCATTTGG+CGG | + | tig0027814:50275-50294 | Msa1435920:CDS | 50.0% | |
| ! | ATTCCGCCAAATGCACTGAC+AGG | - | tig0027814:50281-50300 | Msa1435920:intergenic | 50.0% |
| !! | TCACTGGCTTGTAAGGTGAG+GGG | - | tig0027814:50415-50434 | Msa1435920:intergenic | 50.0% |
| !! | CTCACTGGCTTGTAAGGTGA+GGG | - | tig0027814:50416-50435 | Msa1435920:intergenic | 50.0% |
| !! | TCTCACTGGCTTGTAAGGTG+AGG | - | tig0027814:50417-50436 | Msa1435920:intergenic | 50.0% |
| TTTGCTCATCCTCGCCAAGA+TGG | - | tig0027814:50524-50543 | Msa1435920:intergenic | 50.0% | |
| GAACATCCTTGTCTCCCCAT+CGG | - | tig0027814:50622-50641 | Msa1435920:intergenic | 50.0% | |
| TGCACCCAGCTATACAGAGA+AGG | + | tig0027814:50656-50675 | Msa1435920:CDS | 50.0% | |
| GCACCCAGCTATACAGAGAA+GGG | + | tig0027814:50657-50676 | Msa1435920:CDS | 50.0% | |
| !! | TCACTCAGACAAGTTGGTGG+AGG | + | tig0027814:50753-50772 | Msa1435920:CDS | 50.0% |
| !! | CACTCAGACAAGTTGGTGGA+GGG | + | tig0027814:50754-50773 | Msa1435920:CDS | 50.0% |
| TCGGAGAAGACTCCTCAAGT+TGG | + | tig0027814:50834-50853 | Msa1435920:CDS | 50.0% | |
| !! | AACTCTCCACACGATTCGGT+TGG | - | tig0027814:51051-51070 | Msa1435920:intergenic | 50.0% |
| ! | TGATGTTAAAGGCGCAGCCT+TGG | + | tig0027814:51099-51118 | Msa1435920:CDS | 50.0% |
| !! | GGTGTTATTGCAGAACCAGG+TGG | + | tig0027814:51753-51772 | Msa1435920:CDS | 50.0% |
| CCAACTGAGCTAAGCTCACG+AGG | - | tig0027814:46404-46423 | Msa1435920:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | tig0027814:46401-46420 | Msa1435920:intron | 55.0% | |
| TAGTGGCTGGGGTTTGAACC+CGG | - | tig0027814:46455-46474 | Msa1435920:intergenic | 55.0% | |
| AGTTCCAGTCCAGGGTGACT+AGG | + | tig0027814:47255-47274 | Msa1435920:intron | 55.0% | |
| ! | GCTTCTGCATTGGAGAGTGC+TGG | + | tig0027814:47621-47640 | Msa1435920:CDS | 55.0% |
| ATTCCTGCCATTGGCCGCAA+TGG | + | tig0027814:47881-47900 | Msa1435920:intron | 55.0% | |
| AGAAGATTACCCCGCCCTTC+TGG | + | tig0027814:49094-49113 | Msa1435920:CDS | 55.0% | |
| CTGCAGTATCTGAGTGGCTG+TGG | + | tig0027814:49198-49217 | Msa1435920:CDS | 55.0% | |
| TGGCTGTGGAAGCAAAGTGC+AGG | + | tig0027814:49212-49231 | Msa1435920:CDS | 55.0% | |
| CTGTGGAAGCAAAGTGCAGG+AGG | + | tig0027814:49215-49234 | Msa1435920:CDS | 55.0% | |
| !! | AGAGGCACTGTCAAACTCGG+AGG | - | tig0027814:49802-49821 | Msa1435920:intergenic | 55.0% |
| CTTGCAGAGGTCAATGCTGG+TGG | + | tig0027814:49892-49911 | Msa1435920:CDS | 55.0% | |
| CTCGCACCTTTCCATGGTGT+TGG | - | tig0027814:49933-49952 | Msa1435920:intergenic | 55.0% | |
| ! | CACCATGGAAAGGTGCGAGT+TGG | + | tig0027814:49934-49953 | Msa1435920:intron | 55.0% |
| AGCCAACTCGCACCTTTCCA+TGG | - | tig0027814:49939-49958 | Msa1435920:intergenic | 55.0% | |
| ! | TCCTTGTCTCCCCATCGGTT+GGG | - | tig0027814:50617-50636 | Msa1435920:intergenic | 55.0% |
| ATCCTTGTCTCCCCATCGGT+TGG | - | tig0027814:50618-50637 | Msa1435920:intergenic | 55.0% | |
| !! | TCAGACAAGTTGGTGGAGGG+TGG | + | tig0027814:50757-50776 | Msa1435920:CDS | 55.0% |
| TCGCGAAGCTCACCAACTTG+AGG | - | tig0027814:50849-50868 | Msa1435920:intergenic | 55.0% | |
| !! | AGTTGGTGAGCTTCGCGATG+CGG | + | tig0027814:50851-50870 | Msa1435920:CDS | 55.0% |
| TTCGCGATGCGGAGTTTGCA+TGG | + | tig0027814:50862-50881 | Msa1435920:CDS | 55.0% | |
| GAGAACACGGGTGGAGGAAG+CGG | - | tig0027814:45865-45884 | Msa1435920:intergenic | 60.0% | |
| TGCACAGAGAACACGGGTGG+AGG | - | tig0027814:45871-45890 | Msa1435920:intergenic | 60.0% | |
| GGTTGCACAGAGAACACGGG+TGG | - | tig0027814:45874-45893 | Msa1435920:intergenic | 60.0% | |
| GAGTCCTAGTCACCCTGGAC+TGG | - | tig0027814:47262-47281 | Msa1435920:intergenic | 60.0% | |
| CTGGTGAGTCCTAGTCACCC+TGG | - | tig0027814:47267-47286 | Msa1435920:intergenic | 60.0% | |
| ACACCATTGCGGCCAATGGC+AGG | - | tig0027814:47887-47906 | Msa1435920:intergenic | 60.0% | |
| GCAGCAGCTCGAATCATGGC+TGG | - | tig0027814:48756-48775 | Msa1435920:intergenic | 60.0% | |
| AAGCGGCCAACCGAATCGTG+TGG | + | tig0027814:51042-51061 | Msa1435920:CDS | 60.0% | |
| TCGCGTGAAGCTACGCCGCA+AGG | - | tig0027814:50218-50237 | Msa1435920:intergenic | 65.0% | |
| GCCCAACCGATGGGGAGACA+AGG | + | tig0027814:50613-50632 | Msa1435920:CDS | 65.0% | |
| ! | TGGTGGAGGGTGGCTAGCTC+AGG | + | tig0027814:50767-50786 | Msa1435920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027814 | gene | 45785 | 52202 | 45785 | ID=Msa1435920;Name=Msa1435920 |
| tig0027814 | mRNA | 45785 | 52202 | 45785 | ID=Msa1435920-mRNA-1;Parent=Msa1435920;Name=Msa1435920-mRNA-1;_AED=0.09;_eAED=0.09;_QI=64|1|1|1|0.91|0.84|13|258|590 |
| tig0027814 | exon | 45785 | 45959 | 45785 | ID=Msa1435920-mRNA-1:exon:9944;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 46047 | 46131 | 46047 | ID=Msa1435920-mRNA-1:exon:9945;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 47403 | 47478 | 47403 | ID=Msa1435920-mRNA-1:exon:9946;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 47593 | 47689 | 47593 | ID=Msa1435920-mRNA-1:exon:9947;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 48112 | 48214 | 48112 | ID=Msa1435920-mRNA-1:exon:9948;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 48646 | 48779 | 48646 | ID=Msa1435920-mRNA-1:exon:9949;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 49062 | 49236 | 49062 | ID=Msa1435920-mRNA-1:exon:9950;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 49791 | 49945 | 49791 | ID=Msa1435920-mRNA-1:exon:9951;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 50119 | 50328 | 50119 | ID=Msa1435920-mRNA-1:exon:9952;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 50582 | 50929 | 50582 | ID=Msa1435920-mRNA-1:exon:9953;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 51019 | 51145 | 51019 | ID=Msa1435920-mRNA-1:exon:9954;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 51712 | 51936 | 51712 | ID=Msa1435920-mRNA-1:exon:9955;Parent=Msa1435920-mRNA-1 |
| tig0027814 | exon | 52018 | 52202 | 52018 | ID=Msa1435920-mRNA-1:exon:9956;Parent=Msa1435920-mRNA-1 |
| tig0027814 | five_prime_UTR | 45785 | 45848 | 45785 | ID=Msa1435920-mRNA-1:five_prime_utr;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 45849 | 45959 | 45849 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 46047 | 46131 | 46047 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 47403 | 47478 | 47403 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 47593 | 47689 | 47593 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 48112 | 48214 | 48112 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 48646 | 48779 | 48646 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 49062 | 49236 | 49062 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 49791 | 49945 | 49791 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 50119 | 50328 | 50119 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 50582 | 50929 | 50582 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 51019 | 51145 | 51019 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | CDS | 51712 | 51863 | 51712 | ID=Msa1435920-mRNA-1:cds;Parent=Msa1435920-mRNA-1 |
| tig0027814 | three_prime_UTR | 51864 | 51936 | 51864 | ID=Msa1435920-mRNA-1:three_prime_utr;Parent=Msa1435920-mRNA-1 |
| tig0027814 | three_prime_UTR | 52018 | 52202 | 52018 | ID=Msa1435920-mRNA-1:three_prime_utr;Parent=Msa1435920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
