Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1421550 | Msa1442620 | 0.816951 | 4.243335e-52 | -8.615850e-47 |
| Msa1442620 | Msa1442630 | 0.893178 | 8.003159e-75 | -8.615850e-47 |
| Msa1292040 | Msa1442620 | 0.845479 | 3.957764e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGTTCCTAATGAAAA+AGG | 0.223244 | tig0030133:+44584 | Msa1442630:CDS |
| ATTTATGAAGATATCATTAT+AGG | 0.243795 | tig0030133:-45211 | Msa1442620:CDS |
| CGACAGCCTGAAGGATTTCC+TGG | 0.259925 | tig0030133:+44926 | Msa1442630:CDS |
| GTAGGATCTGGTGGATTTCC+TGG | 0.299465 | tig0030133:+44671 | Msa1442630:CDS |
| AATCCTTCAGGTAGTCCTTT+AGG | 0.308295 | tig0030133:-45001 | Msa1442620:intron |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | tig0030133:+44692 | Msa1442630:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | tig0030133:+44947 | Msa1442630:CDS |
| AAGATACTTGGAAAACTATC+TGG | 0.346323 | tig0030133:+45058 | Msa1442630:CDS |
| TGCCGTGAAGGAGGCTATAA+TGG | 0.347763 | tig0030133:+45144 | None:intergenic |
| AACTGGAAGGCTCCCACCTT+CGG | 0.348143 | tig0030133:-44570 | Msa1442620:CDS |
| AAACTATCTGGTATAGTATC+TGG | 0.358027 | tig0030133:+45070 | Msa1442630:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.369954 | tig0030133:+44773 | Msa1442630:CDS |
| ACTGGAAGGCTCCCACCTTC+GGG | 0.371322 | tig0030133:-44569 | Msa1442620:intron |
| GTAGGATCTAGTGGATTTCC+TGG | 0.392486 | tig0030133:+44716 | Msa1442630:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.393975 | tig0030133:+44959 | Msa1442630:CDS |
| GGTGGATTTCCTGGACTGCC+TGG | 0.395309 | tig0030133:+44680 | Msa1442630:CDS |
| CCAACCAGGTGAAGGAGGTT+TGG | 0.397385 | tig0030133:+45109 | None:intergenic |
| GAAGGATTTCCTGGACTGCC+TGG | 0.404463 | tig0030133:+44935 | Msa1442630:CDS |
| AGACTGCCTAGAGGATTTCC+TGG | 0.421682 | tig0030133:+44647 | Msa1442630:CDS |
| CAACCAGGTGAAGGAGGTTT+GGG | 0.421869 | tig0030133:+45110 | None:intergenic |
| GGCAGTCCAGGAAATCCTTC+AGG | 0.429276 | tig0030133:-44932 | Msa1442620:CDS |
| AGTGGATTTCCTGGACTGCC+TGG | 0.429692 | tig0030133:+44725 | Msa1442630:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.442338 | tig0030133:+44659 | Msa1442630:CDS |
| TTCCATTATAGCCTCCTTCA+CGG | 0.446403 | tig0030133:-45146 | Msa1442620:CDS |
| GGTGAAGGAGGTTTGGGTGA+TGG | 0.466518 | tig0030133:+45116 | None:intergenic |
| CTGGAGGATTTCCTAGTGTA+GGG | 0.489822 | tig0030133:+44744 | Msa1442630:CDS |
| CTTCACCTGGTTGGTACACC+AGG | 0.491546 | tig0030133:-45100 | Msa1442620:CDS |
| TAGGCTTAGTGATGACCATC+AGG | 0.496965 | tig0030133:-45192 | Msa1442620:CDS |
| GAAGGAGGTTTGGGTGATGG+AGG | 0.506051 | tig0030133:+45119 | None:intergenic |
| AATGGAAGTGATAGTAATGA+TGG | 0.519897 | tig0030133:+45162 | None:intergenic |
| TGTCCTCTAGATCCTACATC+AGG | 0.521388 | tig0030133:-44890 | Msa1442620:CDS |
| TCAGGCTGTCGAAATCCTCC+AGG | 0.532185 | tig0030133:-44914 | Msa1442620:CDS |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | tig0030133:-44689 | Msa1442620:CDS |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | tig0030133:-44944 | Msa1442620:CDS |
| TTTCCTGGTGTAGGATCTAG+TGG | 0.538813 | tig0030133:+44707 | Msa1442630:CDS |
| CCTGGAGGATTTCCTAGTGT+AGG | 0.538910 | tig0030133:+44743 | Msa1442630:CDS |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.545859 | tig0030133:-44734 | Msa1442620:CDS |
| TTTCCTGGTGTAGGATCTGG+TGG | 0.550376 | tig0030133:+44662 | Msa1442630:CDS |
| TACTGCCTGGTGTACCAACC+AGG | 0.555639 | tig0030133:+45095 | Msa1442630:CDS |
| GGAAATCCTCTAGGCAGTCT+AGG | 0.557439 | tig0030133:-44644 | Msa1442620:CDS |
| ATAGTATCTGGAGTACTGCC+TGG | 0.560914 | tig0030133:+45082 | Msa1442630:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | tig0030133:+44698 | Msa1442630:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | tig0030133:+44779 | Msa1442630:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | tig0030133:+44953 | Msa1442630:CDS |
| TCACCCAAACCTCCTTCACC+TGG | 0.574916 | tig0030133:-45113 | Msa1442620:CDS |
| TTTCCTGATGTAGGATCTAG+AGG | 0.576832 | tig0030133:+44887 | Msa1442630:CDS |
| TTTCCTAGTGTAGGGTCTAG+AGG | 0.583221 | tig0030133:+44752 | Msa1442630:CDS |
| GGAGGATTTCGACAGCCTGA+AGG | 0.584296 | tig0030133:+44917 | Msa1442630:CDS |
| CCTACACCAGGAAATCCTCT+AGG | 0.586303 | tig0030133:-44653 | Msa1442620:CDS |
| TTTCCTGGTGTAGGATCTAG+AGG | 0.592608 | tig0030133:+44788 | Msa1442630:CDS |
| GACGGCTATAAACCCGAAGG+TGG | 0.593621 | tig0030133:+44557 | Msa1442630:CDS |
| CCTACATCAGGAAATCCTCC+AGG | 0.594335 | tig0030133:-44878 | Msa1442620:intron |
| CCTGGAGGATTTCCTGATGT+AGG | 0.594745 | tig0030133:+44878 | Msa1442630:CDS |
| TTTCCTGGTGTAGGATCTGG+AGG | 0.596162 | tig0030133:+44962 | Msa1442630:CDS |
| CCAAACCTCCTTCACCTGGT+TGG | 0.598208 | tig0030133:-45109 | Msa1442620:CDS |
| ATGGAGGACTGCCGTGAAGG+AGG | 0.601822 | tig0030133:+45135 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | tig0030133:-44698 | Msa1442620:CDS |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | tig0030133:-44779 | Msa1442620:CDS |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | tig0030133:-44953 | Msa1442620:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.608890 | tig0030133:+44728 | Msa1442630:CDS |
| CCTAGAGGATTTCCTGGTGT+AGG | 0.610793 | tig0030133:+44653 | Msa1442630:CDS |
| CTGGTGTACCAACCAGGTGA+AGG | 0.612247 | tig0030133:+45101 | Msa1442630:CDS |
| AATCCTCCAGATCCTACACC+AGG | 0.612832 | tig0030133:-44965 | Msa1442620:CDS |
| GTGATGGAGGACTGCCGTGA+AGG | 0.613144 | tig0030133:+45132 | None:intergenic |
| GGATTTCCTGGACTGCCTGG+AGG | 0.614082 | tig0030133:+44683 | Msa1442630:CDS |
| TGTCCTCTAGATCCTACACC+AGG | 0.624714 | tig0030133:-44791 | Msa1442620:CDS |
| AATCCACCAGATCCTACACC+AGG | 0.625031 | tig0030133:-44665 | Msa1442620:CDS |
| GTAGGATCTAGAGGACAACC+TGG | 0.632506 | tig0030133:+44896 | Msa1442630:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.637581 | tig0030133:+44938 | Msa1442630:CDS |
| AATCCACTAGATCCTACACC+AGG | 0.638733 | tig0030133:-44710 | Msa1442620:CDS |
| GTGTACCAACCAGGTGAAGG+AGG | 0.641507 | tig0030133:+45104 | None:intergenic |
| CCTACACTAGGAAATCCTCC+AGG | 0.669583 | tig0030133:-44743 | Msa1442620:CDS |
| AGTCCTCTAGACCCTACACT+AGG | 0.670297 | tig0030133:-44755 | Msa1442620:CDS |
| ACGGCTATAAACCCGAAGGT+GGG | 0.675663 | tig0030133:+44558 | Msa1442630:CDS |
| AATGATGGCATTGTACCTGA+TGG | 0.683427 | tig0030133:+45177 | None:intergenic |
| GGGTCTAGAGGACTGCCTGG+AGG | 0.693753 | tig0030133:+44764 | Msa1442630:CDS |
| GGATCTAGAGGACAACCTGG+AGG | 0.719893 | tig0030133:+44899 | Msa1442630:CDS |
| GGATTTCCTAGACTGCCTAG+AGG | 0.729360 | tig0030133:+44638 | Msa1442630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAATTAAATAACTTAT+AGG | - | tig0030133:43463-43482 | Msa1442620:intron | 10.0% |
| !!! | AAATATTAGTTTAGTTTATA+TGG | - | tig0030133:44314-44333 | Msa1442620:intron | 10.0% |
| !!! | ATTTTTGTAATTTCTTTTTG+TGG | + | tig0030133:41828-41847 | None:intergenic | 15.0% |
| !! | AAAGAAATTACAAAAATGAA+AGG | - | tig0030133:41831-41850 | Msa1442620:intron | 15.0% |
| !! | TATATTCTACAGAATATATA+TGG | - | tig0030133:41996-42015 | Msa1442620:intron | 15.0% |
| !! | ATTTATGAAGATATCATTAT+AGG | - | tig0030133:42047-42066 | Msa1442620:intron | 15.0% |
| !! | TTATTAGTTGAAATTTACAA+CGG | + | tig0030133:43110-43129 | None:intergenic | 15.0% |
| !! | TCAACATTAATTATTATTTG+TGG | - | tig0030133:43168-43187 | Msa1442620:intron | 15.0% |
| !! | GTTATAATTAAATAACTAGA+AGG | - | tig0030133:43348-43367 | Msa1442620:intron | 15.0% |
| !! | ACAATTAAATAACATAAAGA+AGG | - | tig0030133:43412-43431 | Msa1442620:intron | 15.0% |
| !! | ATACTTAAAAAAATGCTTAA+TGG | - | tig0030133:43559-43578 | Msa1442620:intron | 15.0% |
| !!! | AGATATTATGCAATTTTATT+TGG | + | tig0030133:44136-44155 | None:intergenic | 15.0% |
| !!! | ATTAATTGAGTTGATTTTAA+TGG | - | tig0030133:44722-44741 | Msa1442620:CDS | 15.0% |
| !! | AAAAATTGCAATTTAAATGT+TGG | + | tig0030133:45240-45259 | None:intergenic | 15.0% |
| !! | GAATATATATGGTTATTAGT+AGG | - | tig0030133:42007-42026 | Msa1442620:intron | 20.0% |
| !!! | TTCTAACACATTCTTTTTAT+CGG | - | tig0030133:43028-43047 | Msa1442620:intron | 20.0% |
| !!! | TTTTATTTGAATCTAACACA+AGG | - | tig0030133:43234-43253 | Msa1442620:intron | 20.0% |
| !! | TGGTACAAAAAAAAACTTAA+AGG | - | tig0030133:43378-43397 | Msa1442620:intron | 20.0% |
| !!! | ATTTGAAATGGCTATTTTAA+AGG | + | tig0030133:43507-43526 | None:intergenic | 20.0% |
| !! | AAAATAGCCATTTCAAATTT+CGG | - | tig0030133:43509-43528 | Msa1442620:intron | 20.0% |
| !!! | TTTTATGTATTGGTATGTAT+TGG | - | tig0030133:44282-44301 | Msa1442620:intron | 20.0% |
| !! | TATAGAAGTTCTTGTAATAA+AGG | + | tig0030133:44561-44580 | Msa1442630:CDS | 20.0% |
| !! | TTAATCATGTAAATCTGAAA+TGG | + | tig0030133:44692-44711 | Msa1442630:CDS | 20.0% |
| !! | TCTACTAACTGTAATTAATA+AGG | + | tig0030133:44778-44797 | Msa1442630:CDS | 20.0% |
| !! | TGATTGAAATGCAATAAATA+AGG | - | tig0030133:44809-44828 | Msa1442620:intron | 20.0% |
| !! | GATTGAAATGCAATAAATAA+GGG | - | tig0030133:44810-44829 | Msa1442620:intron | 20.0% |
| !! | GATTGAAAGATAAATTAAGT+TGG | - | tig0030133:44889-44908 | Msa1442620:CDS | 20.0% |
| ! | TGAAAGGAAATATAATCGTT+CGG | - | tig0030133:41847-41866 | Msa1442620:intron | 25.0% |
| ! | GAATCAAACAAAATTCCATA+TGG | + | tig0030133:42831-42850 | None:intergenic | 25.0% |
| ! | AAGGAAAAAGAGAACTTATA+GGG | + | tig0030133:42983-43002 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAGAGAACTTAT+AGG | + | tig0030133:42984-43003 | None:intergenic | 25.0% |
| ! | AATGTGTAGAAAGAGTTATT+GGG | + | tig0030133:43008-43027 | None:intergenic | 25.0% |
| ! | AAATGTGTAGAAAGAGTTAT+TGG | + | tig0030133:43009-43028 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTTTGTACCACTT+AGG | + | tig0030133:43375-43394 | None:intergenic | 25.0% |
| ! | ACTATACTACTTCACAAAAA+AGG | + | tig0030133:44423-44442 | Msa1442630:CDS | 25.0% |
| ! | AGACATTGTAAAATATATGC+AGG | + | tig0030133:44507-44526 | Msa1442630:CDS | 25.0% |
| ! | ATGGAATACCTAATATAAGA+CGG | + | tig0030133:44673-44692 | Msa1442630:CDS | 25.0% |
| ! | AAAACCATCACTTAATTAGA+GGG | - | tig0030133:44995-45014 | Msa1442620:intron | 25.0% |
| ! | AGAAAAGTTGAAAATAAGTC+AGG | + | tig0030133:45040-45059 | Msa1442630:CDS | 25.0% |
| !!! | CAACTTTTCTACTCTAAAAA+AGG | - | tig0030133:45050-45069 | Msa1442620:intron | 25.0% |
| ! | AGCTTCTCAAAAATTATGTT+TGG | + | tig0030133:45086-45105 | Msa1442630:CDS | 25.0% |
| !!! | GATCAACTTTTAAAAAACCT+CGG | - | tig0030133:45177-45196 | Msa1442620:CDS | 25.0% |
| ! | AAGGACTAAAATCTGAAAAA+AGG | + | tig0030133:45205-45224 | None:intergenic | 25.0% |
| ATTATAAGCATCCTTACAAC+AGG | - | tig0030133:41957-41976 | Msa1442620:intron | 30.0% | |
| AAGAATAAGATCCTGTTGTA+AGG | + | tig0030133:41971-41990 | None:intergenic | 30.0% | |
| AATGGAAGTGATAGTAATGA+TGG | + | tig0030133:42099-42118 | None:intergenic | 30.0% | |
| AAACTATCTGGTATAGTATC+TGG | + | tig0030133:42191-42210 | None:intergenic | 30.0% | |
| AAGATACTTGGAAAACTATC+TGG | + | tig0030133:42203-42222 | None:intergenic | 30.0% | |
| !!! | AAAGGATTTGGAGGATTTTT+TGG | + | tig0030133:42659-42678 | None:intergenic | 30.0% |
| GTTCCTAATGAAAAAGGATT+TGG | + | tig0030133:42671-42690 | None:intergenic | 30.0% | |
| !! | AATCCTTTTTCATTAGGAAC+TGG | - | tig0030133:42671-42690 | Msa1442620:intron | 30.0% |
| TAGAAAGAGTTATTGGGAAA+AGG | + | tig0030133:43002-43021 | None:intergenic | 30.0% | |
| ATAAGTCACATTAAATCGTG+TGG | - | tig0030133:43062-43081 | Msa1442620:intron | 30.0% | |
| AGAATGTGATGAAAAATGTG+TGG | - | tig0030133:43133-43152 | Msa1442620:intron | 30.0% | |
| TTCATGTCAAAACTCAAAAG+TGG | + | tig0030133:43201-43220 | None:intergenic | 30.0% | |
| ! | TGGGTGTTACAAATATAAGT+CGG | + | tig0030133:43591-43610 | None:intergenic | 30.0% |
| GAAGGCTTATAAGAATTGTT+AGG | - | tig0030133:43732-43751 | Msa1442620:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | + | tig0030133:43763-43782 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | - | tig0030133:43768-43787 | Msa1442620:intron | 30.0% |
| !! | AAGCTCTTGCTTTTATGTAT+TGG | - | tig0030133:44272-44291 | Msa1442620:intron | 30.0% |
| ! | TATGTATTGGTATGTATTGG+TGG | - | tig0030133:44285-44304 | Msa1442620:intron | 30.0% |
| TAAAATATATGCAGGAGTCA+GGG | + | tig0030133:44499-44518 | Msa1442630:CDS | 30.0% | |
| !! | TGTTTTAAATGTGCATAGTC+AGG | - | tig0030133:44628-44647 | Msa1442620:CDS | 30.0% |
| AATACCTAATATAAGACGGA+GGG | + | tig0030133:44669-44688 | Msa1442630:CDS | 30.0% | |
| ! | ATGCAATAAATAAGGGTATG+TGG | - | tig0030133:44817-44836 | Msa1442620:intron | 30.0% |
| ! | TGCAATAAATAAGGGTATGT+GGG | - | tig0030133:44818-44837 | Msa1442620:intron | 30.0% |
| GTTACTAAGATAAAAGTGGA+GGG | + | tig0030133:44860-44879 | Msa1442630:CDS | 30.0% | |
| TTATCTTTCAATCGAATTCC+AGG | + | tig0030133:44882-44901 | Msa1442630:CDS | 30.0% | |
| TAAATGCCAACAAATTCGTT+TGG | + | tig0030133:44954-44973 | Msa1442630:CDS | 30.0% | |
| GAAAACCATCACTTAATTAG+AGG | - | tig0030133:44994-45013 | Msa1442620:CDS | 30.0% | |
| ACTTAATTAGAGGGAGTAAT+AGG | - | tig0030133:45004-45023 | Msa1442620:intron | 30.0% | |
| ! | ACTCTAAAAAAGGAGAAGTT+CGG | - | tig0030133:45060-45079 | Msa1442620:intron | 30.0% |
| !! | GAGACAATTTTGATGAGAAT+TGG | + | tig0030133:45330-45349 | None:intergenic | 30.0% |
| AAGGAAATATAATCGTTCGG+TGG | - | tig0030133:41850-41869 | Msa1442620:intron | 35.0% | |
| TTGGGAGATGAAAAGATACT+TGG | + | tig0030133:42215-42234 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGTGTAGGATTTGG+AGG | + | tig0030133:42644-42663 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGGTGTAGGATT+TGG | + | tig0030133:42647-42666 | None:intergenic | 35.0% |
| !!! | TTTGGAGGATTTTTTGGTGT+AGG | + | tig0030133:42653-42672 | None:intergenic | 35.0% |
| CCTAATGAAAAAGGATTTGG+AGG | + | tig0030133:42668-42687 | None:intergenic | 35.0% | |
| !! | CCTCCAAATCCTTTTTCATT+AGG | - | tig0030133:42665-42684 | Msa1442620:intron | 35.0% |
| CTTCCAGTTCCTAATGAAAA+AGG | + | tig0030133:42677-42696 | None:intergenic | 35.0% | |
| !! | CTTTTTCATTAGGAACTGGA+AGG | - | tig0030133:42675-42694 | Msa1442620:intron | 35.0% |
| GAACTTTCAAAGTTGCCATA+TGG | - | tig0030133:42813-42832 | Msa1442620:intron | 35.0% | |
| ATTCTTACACAACTGAGTTG+TGG | - | tig0030133:42847-42866 | Msa1442620:intron | 35.0% | |
| TTCCTGAGACAGGTATTTAT+AGG | - | tig0030133:42878-42897 | Msa1442620:intron | 35.0% | |
| TTCCTATAAATACCTGTCTC+AGG | + | tig0030133:42883-42902 | None:intergenic | 35.0% | |
| ! | TTTTGTGATGTGTTGTCTTG+CGG | - | tig0030133:42936-42955 | Msa1442620:intron | 35.0% |
| AAGGTTTCAAGATTCATGAG+AGG | - | tig0030133:43253-43272 | Msa1442620:intron | 35.0% | |
| AGGTTTCAAGATTCATGAGA+GGG | - | tig0030133:43254-43273 | Msa1442620:intron | 35.0% | |
| !! | TTCATGAGAGGGGTATTTAT+AGG | - | tig0030133:43265-43284 | Msa1442620:intron | 35.0% |
| AATAACTAGAAGGACCTAAG+TGG | - | tig0030133:43358-43377 | Msa1442620:intron | 35.0% | |
| ATGCACACCGAAATTTGAAA+TGG | + | tig0030133:43519-43538 | None:intergenic | 35.0% | |
| ! | GGGTGTTACAAATATAAGTC+GGG | + | tig0030133:43590-43609 | None:intergenic | 35.0% |
| GAAGATGCATCTTGTTGATA+TGG | + | tig0030133:43764-43783 | None:intergenic | 35.0% | |
| ACGCTACAATGATCATAAAG+CGG | - | tig0030133:44205-44224 | Msa1442620:intron | 35.0% | |
| GTAAAATATATGCAGGAGTC+AGG | + | tig0030133:44500-44519 | Msa1442630:CDS | 35.0% | |
| GAATACCTAATATAAGACGG+AGG | + | tig0030133:44670-44689 | Msa1442630:CDS | 35.0% | |
| ! | AATAAATAAGGGTATGTGGG+TGG | - | tig0030133:44821-44840 | Msa1442620:intron | 35.0% |
| GGTTACTAAGATAAAAGTGG+AGG | + | tig0030133:44861-44880 | Msa1442630:CDS | 35.0% | |
| CCAGGTTACTAAGATAAAAG+TGG | + | tig0030133:44864-44883 | Msa1442630:CDS | 35.0% | |
| !! | CCACTTTTATCTTAGTAACC+TGG | - | tig0030133:44861-44880 | Msa1442620:intron | 35.0% |
| AACTCTCCAAACGAATTTGT+TGG | - | tig0030133:44945-44964 | Msa1442620:CDS | 35.0% | |
| TACTCCCTCTAATTAAGTGA+TGG | + | tig0030133:45002-45021 | Msa1442630:CDS | 35.0% | |
| !! | GATTTTAGTCCTTCGATTCT+CGG | - | tig0030133:45212-45231 | Msa1442620:CDS | 35.0% |
| ! | GAATGTTACTTCCTCTCAAT+CGG | - | tig0030133:45267-45286 | Msa1442620:intron | 35.0% |
| AATGATGGCATTGTACCTGA+TGG | + | tig0030133:42084-42103 | None:intergenic | 40.0% | |
| TTCCATTATAGCCTCCTTCA+CGG | - | tig0030133:42112-42131 | Msa1442620:intron | 40.0% | |
| AATCCTTCAGGTAGTCCTTT+AGG | - | tig0030133:42257-42276 | Msa1442620:intron | 40.0% | |
| !! | TTTTCTGGAGGACTTCCTAA+AGG | + | tig0030133:42275-42294 | None:intergenic | 40.0% |
| TTTCCTGATGTAGGATCTAG+AGG | + | tig0030133:42374-42393 | None:intergenic | 40.0% | |
| GATTCTGATCCTGATCAAGA+CGG | + | tig0030133:42722-42741 | None:intergenic | 40.0% | |
| ! | ATTGCTCTCTTTGTGCTGTT+GGG | + | tig0030133:42788-42807 | None:intergenic | 40.0% |
| GACCATGAAGTAGTGCAAAT+TGG | - | tig0030133:42911-42930 | Msa1442620:intron | 40.0% | |
| TGCCAATTTGCACTACTTCA+TGG | + | tig0030133:42916-42935 | None:intergenic | 40.0% | |
| GTGTGGATCCCGTATAATTA+TGG | - | tig0030133:43079-43098 | Msa1442620:intron | 40.0% | |
| TGGATCCCGTATAATTATGG+TGG | - | tig0030133:43082-43101 | Msa1442620:intron | 40.0% | |
| GGTTTCAAGATTCATGAGAG+GGG | - | tig0030133:43255-43274 | Msa1442620:intron | 40.0% | |
| !! | GAGAGGGGTATTTATAGGAA+TGG | - | tig0030133:43270-43289 | Msa1442620:intron | 40.0% |
| TATTTGTAACACCCACAACG+TGG | - | tig0030133:43596-43615 | Msa1442620:intron | 40.0% | |
| TCGGTTCCTCTTATTAACGT+GGG | + | tig0030133:43693-43712 | None:intergenic | 40.0% | |
| TTCGGTTCCTCTTATTAACG+TGG | + | tig0030133:43694-43713 | None:intergenic | 40.0% | |
| TAAGAGGAACCGAATCACAT+CGG | - | tig0030133:43700-43719 | Msa1442620:intron | 40.0% | |
| GCTTAACTGTGGAGTTCTTA+TGG | + | tig0030133:43803-43822 | None:intergenic | 40.0% | |
| !!! | TGCTTGACTTGGAGCAATTT+TGG | - | tig0030133:43824-43843 | Msa1442620:intron | 40.0% |
| !!! | GCTTGACTTGGAGCAATTTT+GGG | - | tig0030133:43825-43844 | Msa1442620:intron | 40.0% |
| !!! | ACTTGGAGCAATTTTGGGAT+AGG | - | tig0030133:43830-43849 | Msa1442620:intron | 40.0% |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | - | tig0030133:43981-44000 | Msa1442620:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | - | tig0030133:43982-44001 | Msa1442620:intron | 40.0% |
| !! | TAACATCCCAGACTGCTTTT+AGG | + | tig0030133:44021-44040 | None:intergenic | 40.0% |
| ATAAAGCGGACATACAAGCA+CGG | - | tig0030133:44219-44238 | Msa1442620:intron | 40.0% | |
| TACTCCCTCCGTCTTATATT+AGG | - | tig0030133:44662-44681 | Msa1442620:CDS | 40.0% | |
| AAATCTGAAAAAAGGAGCCG+AGG | + | tig0030133:45197-45216 | None:intergenic | 40.0% | |
| ! | AACAATGATCACCGATTGAG+AGG | + | tig0030133:45281-45300 | None:intergenic | 40.0% |
| TAGGCTTAGTGATGACCATC+AGG | - | tig0030133:42066-42085 | Msa1442620:intron | 45.0% | |
| !! | ATAGTATCTGGAGTACTGCC+TGG | + | tig0030133:42179-42198 | None:intergenic | 45.0% |
| GGTGTAGGATCTAGAGGTTT+GGG | + | tig0030133:42233-42252 | None:intergenic | 45.0% | |
| TGGTGTAGGATCTAGAGGTT+TGG | + | tig0030133:42234-42253 | None:intergenic | 45.0% | |
| AAACCTCTAGATCCTACACC+AGG | - | tig0030133:42233-42252 | Msa1442620:intron | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+AGG | + | tig0030133:42239-42258 | None:intergenic | 45.0% | |
| CTTCCTAAAGGACTACCTGA+AGG | + | tig0030133:42263-42282 | None:intergenic | 45.0% | |
| ! | GTAGGATCTGGAGGATTTTC+TGG | + | tig0030133:42290-42309 | None:intergenic | 45.0% |
| TGTCCTCTAGATCCTACATC+AGG | - | tig0030133:42368-42387 | Msa1442620:intron | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+AGG | + | tig0030133:42239-42258 | None:intergenic | 45.0% | |
| TTTCCTAGTGTAGGGTCTAG+AGG | + | tig0030133:42509-42528 | None:intergenic | 45.0% | |
| CTGGAGGATTTCCTAGTGTA+GGG | + | tig0030133:42517-42536 | None:intergenic | 45.0% | |
| !! | GTAGGATCTAGTGGATTTCC+TGG | + | tig0030133:42545-42564 | None:intergenic | 45.0% |
| AATCCACTAGATCCTACACC+AGG | - | tig0030133:42548-42567 | Msa1442620:intron | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+TGG | + | tig0030133:42239-42258 | None:intergenic | 45.0% | |
| GGTTTATAGCCGTCTTGATC+AGG | - | tig0030133:42710-42729 | Msa1442620:intron | 45.0% | |
| CATTGCTCTCTTTGTGCTGT+TGG | + | tig0030133:42789-42808 | None:intergenic | 45.0% | |
| GGTTTCAAGATTCCTGAGAC+AGG | - | tig0030133:42868-42887 | Msa1442620:intron | 45.0% | |
| ACGGCGCCACCATAATTATA+CGG | + | tig0030133:43091-43110 | None:intergenic | 45.0% | |
| GATATCGAAAGCCACGTTGT+GGG | + | tig0030133:43610-43629 | None:intergenic | 45.0% | |
| AACCTTTCGTATCCAACTGG+CGG | + | tig0030133:43633-43652 | None:intergenic | 45.0% | |
| TTAACGTGGGGTCATCCTTA+CGG | + | tig0030133:43680-43699 | None:intergenic | 45.0% | |
| GATGACCCCACGTTAATAAG+AGG | - | tig0030133:43684-43703 | Msa1442620:intron | 45.0% | |
| CGGTTCCTCTTATTAACGTG+GGG | + | tig0030133:43692-43711 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGATT+CGG | + | tig0030133:43712-43731 | None:intergenic | 45.0% | |
| CGAATCACATCGGAATGAGA+GGG | - | tig0030133:43710-43729 | Msa1442620:intron | 45.0% | |
| AAGTCAAGCACGCTTAACTG+TGG | + | tig0030133:43814-43833 | None:intergenic | 45.0% | |
| ACAGTTAAGCGTGCTTGACT+TGG | - | tig0030133:43813-43832 | Msa1442620:intron | 45.0% | |
| !!! | TTTTGGGATAGGTGACCTAC+CGG | - | tig0030133:43841-43860 | Msa1442620:intron | 45.0% |
| ACGCTGAAAAGACTCGTGTT+GGG | - | tig0030133:43900-43919 | Msa1442620:intron | 45.0% | |
| TGAAAAGACTCGTGTTGGGA+TGG | - | tig0030133:43904-43923 | Msa1442620:intron | 45.0% | |
| GAAAAGACTCGTGTTGGGAT+GGG | - | tig0030133:43905-43924 | Msa1442620:intron | 45.0% | |
| CACACTGAAAAGACTCGTGT+TGG | - | tig0030133:43974-43993 | Msa1442620:intron | 45.0% | |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | - | tig0030133:43983-44002 | Msa1442620:intron | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | - | tig0030133:43991-44010 | Msa1442620:intron | 45.0% |
| GGCAATCCTAAAAGCAGTCT+GGG | - | tig0030133:44012-44031 | Msa1442620:intron | 45.0% | |
| GTGAAGAAATGAGTTGTCCG+AGG | - | tig0030133:44467-44486 | Msa1442620:intron | 45.0% | |
| !!! | TTGATTTTAATTAAAATTAT+AGG | + | tig0030133:44169-44188 | None:intergenic | 5.0% |
| TGCCGTGAAGGAGGCTATAA+TGG | + | tig0030133:42117-42136 | None:intergenic | 50.0% | |
| CAACCAGGTGAAGGAGGTTT+GGG | + | tig0030133:42151-42170 | None:intergenic | 50.0% | |
| CCTGAAGGATTTCCTGGTGT+AGG | + | tig0030133:42248-42267 | None:intergenic | 50.0% | |
| CCTACACCAGGAAATCCTTC+AGG | - | tig0030133:42245-42264 | Msa1442620:intron | 50.0% | |
| GGACTACCTGAAGGATTTCC+TGG | + | tig0030133:42254-42273 | None:intergenic | 50.0% | |
| ! | GGATCTGGAGGATTTTCTGG+AGG | + | tig0030133:42287-42306 | None:intergenic | 50.0% |
| AATCCTCCAGATCCTACACC+AGG | - | tig0030133:42293-42312 | Msa1442620:intron | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+AGG | + | tig0030133:42299-42318 | None:intergenic | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | tig0030133:42242-42261 | None:intergenic | 50.0% | |
| GTAGGATCTAGAGGACAACC+TGG | + | tig0030133:42365-42384 | None:intergenic | 50.0% | |
| CCTGGAGGATTTCCTGATGT+AGG | + | tig0030133:42383-42402 | None:intergenic | 50.0% | |
| CCTACATCAGGAAATCCTCC+AGG | - | tig0030133:42380-42399 | Msa1442620:intron | 50.0% | |
| GTAGGATCTGGAGGATTTCC+TGG | + | tig0030133:42410-42429 | None:intergenic | 50.0% | |
| AATCCTCCAGATCCTACACC+AGG | - | tig0030133:42293-42312 | Msa1442620:intron | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+AGG | + | tig0030133:42299-42318 | None:intergenic | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | tig0030133:42242-42261 | None:intergenic | 50.0% | |
| TGTCCTCTAGATCCTACACC+AGG | - | tig0030133:42467-42486 | Msa1442620:intron | 50.0% | |
| AGTCCTCTAGACCCTACACT+AGG | - | tig0030133:42503-42522 | Msa1442620:intron | 50.0% | |
| CCTGGAGGATTTCCTAGTGT+AGG | + | tig0030133:42518-42537 | None:intergenic | 50.0% | |
| CCTACACTAGGAAATCCTCC+AGG | - | tig0030133:42515-42534 | Msa1442620:intron | 50.0% | |
| !! | GTAGGATCTGGTGGATTTCC+TGG | + | tig0030133:42590-42609 | None:intergenic | 50.0% |
| AATCCACCAGATCCTACACC+AGG | - | tig0030133:42593-42612 | Msa1442620:intron | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+TGG | + | tig0030133:42299-42318 | None:intergenic | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | tig0030133:42242-42261 | None:intergenic | 50.0% | |
| CCTAGAGGATTTCCTGGTGT+AGG | + | tig0030133:42608-42627 | None:intergenic | 50.0% | |
| CCTACACCAGGAAATCCTCT+AGG | - | tig0030133:42605-42624 | Msa1442620:intron | 50.0% | |
| AGACTGCCTAGAGGATTTCC+TGG | + | tig0030133:42614-42633 | None:intergenic | 50.0% | |
| GGAAATCCTCTAGGCAGTCT+AGG | - | tig0030133:42614-42633 | Msa1442620:intron | 50.0% | |
| GGATTTCCTAGACTGCCTAG+AGG | + | tig0030133:42623-42642 | None:intergenic | 50.0% | |
| ACGGCTATAAACCCGAAGGT+GGG | + | tig0030133:42703-42722 | None:intergenic | 50.0% | |
| CAAGACGGCTATAAACCCGA+AGG | + | tig0030133:42707-42726 | None:intergenic | 50.0% | |
| CGGCGCCACCATAATTATAC+GGG | + | tig0030133:43090-43109 | None:intergenic | 50.0% | |
| GGATATCGAAAGCCACGTTG+TGG | + | tig0030133:43611-43630 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCAACTGGC+GGG | + | tig0030133:43632-43651 | None:intergenic | 50.0% | |
| GGGAACCTTTCGTATCCAAC+TGG | + | tig0030133:43636-43655 | None:intergenic | 50.0% | |
| CCGAATCACATCGGAATGAG+AGG | - | tig0030133:43709-43728 | Msa1442620:intron | 50.0% | |
| TCACATCGGAATGAGAGGGA+AGG | - | tig0030133:43714-43733 | Msa1442620:intron | 50.0% | |
| ! | TTTGGGATAGGTGACCTACC+GGG | - | tig0030133:43842-43861 | Msa1442620:intron | 50.0% |
| TGACCTACCGGGAAGTTTCT+CGG | - | tig0030133:43853-43872 | Msa1442620:intron | 50.0% | |
| TTACCGAGAAACTTCCCGGT+AGG | + | tig0030133:43859-43878 | None:intergenic | 50.0% | |
| ACGCTTACCGAGAAACTTCC+CGG | + | tig0030133:43863-43882 | None:intergenic | 50.0% | |
| CACGCTGAAAAGACTCGTGT+TGG | - | tig0030133:43899-43918 | Msa1442620:intron | 50.0% | |
| TGACCTACCGGGAAGTTTCT+CGG | - | tig0030133:43853-43872 | Msa1442620:intron | 50.0% | |
| TTACCGAGAAACTTCCCGGT+AGG | + | tig0030133:43859-43878 | None:intergenic | 50.0% | |
| ACGCTTACCGAGAAACTTCC+CGG | + | tig0030133:43863-43882 | None:intergenic | 50.0% | |
| CGGCAATCCTAAAAGCAGTC+TGG | - | tig0030133:44011-44030 | Msa1442620:intron | 50.0% | |
| AGGGAGTAATAGGCAGCGTT+TGG | - | tig0030133:45014-45033 | Msa1442620:intron | 50.0% | |
| ATGTTGGAGCCGAGAATCGA+AGG | + | tig0030133:45224-45243 | None:intergenic | 50.0% | |
| ! | GAAGGAGGTTTGGGTGATGG+AGG | + | tig0030133:42142-42161 | None:intergenic | 55.0% |
| GGTGAAGGAGGTTTGGGTGA+TGG | + | tig0030133:42145-42164 | None:intergenic | 55.0% | |
| TCACCCAAACCTCCTTCACC+TGG | - | tig0030133:42145-42164 | Msa1442620:intron | 55.0% | |
| CCAACCAGGTGAAGGAGGTT+TGG | + | tig0030133:42152-42171 | None:intergenic | 55.0% | |
| CCAAACCTCCTTCACCTGGT+TGG | - | tig0030133:42149-42168 | Msa1442620:intron | 55.0% | |
| GTGTACCAACCAGGTGAAGG+AGG | + | tig0030133:42157-42176 | None:intergenic | 55.0% | |
| CTGGTGTACCAACCAGGTGA+AGG | + | tig0030133:42160-42179 | None:intergenic | 55.0% | |
| ! | CTTCACCTGGTTGGTACACC+AGG | - | tig0030133:42158-42177 | Msa1442620:intron | 55.0% |
| TACTGCCTGGTGTACCAACC+AGG | + | tig0030133:42166-42185 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | tig0030133:42308-42327 | None:intergenic | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | tig0030133:42305-42324 | Msa1442620:intron | 55.0% | |
| GAAGGATTTCCTGGACTGCC+TGG | + | tig0030133:42326-42345 | None:intergenic | 55.0% | |
| GGCAGTCCAGGAAATCCTTC+AGG | - | tig0030133:42326-42345 | Msa1442620:intron | 55.0% | |
| CGACAGCCTGAAGGATTTCC+TGG | + | tig0030133:42335-42354 | None:intergenic | 55.0% | |
| GGAGGATTTCGACAGCCTGA+AGG | + | tig0030133:42344-42363 | None:intergenic | 55.0% | |
| TCAGGCTGTCGAAATCCTCC+AGG | - | tig0030133:42344-42363 | Msa1442620:intron | 55.0% | |
| GGATCTAGAGGACAACCTGG+AGG | + | tig0030133:42362-42381 | None:intergenic | 55.0% | |
| GGAAATCCTCCAGGTAGTCC+AGG | - | tig0030133:42389-42408 | Msa1442620:intron | 55.0% | |
| GGATTTCCTGGACTACCTGG+AGG | + | tig0030133:42398-42417 | None:intergenic | 55.0% | |
| GGAGGATTTCCTGGACTACC+TGG | + | tig0030133:42401-42420 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | tig0030133:42308-42327 | None:intergenic | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | tig0030133:42305-42324 | Msa1442620:intron | 55.0% | |
| CAACAGCCTGGAGGATTTCC+TGG | + | tig0030133:42434-42453 | None:intergenic | 55.0% | |
| GGAGGATTTCAACAGCCTGG+AGG | + | tig0030133:42443-42462 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCAACAGCC+TGG | + | tig0030133:42446-42465 | None:intergenic | 55.0% | |
| CCAGGCTGTTGAAATCCTCC+AGG | - | tig0030133:42443-42462 | Msa1442620:intron | 55.0% | |
| GTAGGATCTAGAGGACAGCC+TGG | + | tig0030133:42464-42483 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | tig0030133:42308-42327 | None:intergenic | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | tig0030133:42305-42324 | Msa1442620:intron | 55.0% | |
| ! | AGTGGATTTCCTGGACTGCC+TGG | + | tig0030133:42536-42555 | None:intergenic | 55.0% |
| CCTGGAGGATTTCCTGGTGT+AGG | + | tig0030133:42308-42327 | None:intergenic | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | tig0030133:42305-42324 | Msa1442620:intron | 55.0% | |
| AACTGGAAGGCTCCCACCTT+CGG | - | tig0030133:42688-42707 | Msa1442620:intron | 55.0% | |
| GACGGCTATAAACCCGAAGG+TGG | + | tig0030133:42704-42723 | None:intergenic | 55.0% | |
| GCTTTCGATATCCCGCCAGT+TGG | - | tig0030133:43618-43637 | Msa1442620:intron | 55.0% | |
| TCCCGCCAGTTGGATACGAA+AGG | - | tig0030133:43628-43647 | Msa1442620:intron | 55.0% | |
| TACGAAAGGTTCCCGCCAGT+TGG | - | tig0030133:43642-43661 | Msa1442620:intron | 55.0% | |
| AAGGTTCCCGCCAGTTGGAA+CGG | - | tig0030133:43647-43666 | Msa1442620:intron | 55.0% | |
| ATAGTGCCCGTTCCAACTGG+CGG | + | tig0030133:43657-43676 | None:intergenic | 55.0% | |
| TGGAACGGGCACTATCCGTA+AGG | - | tig0030133:43662-43681 | Msa1442620:intron | 55.0% | |
| TGTTGGGATGGGTGACCTAC+CGG | - | tig0030133:43916-43935 | Msa1442620:intron | 55.0% | |
| AGGAGTCAGGGTTCGAACCT+CGG | + | tig0030133:44487-44506 | Msa1442630:CDS | 55.0% | |
| ATGGAGGACTGCCGTGAAGG+AGG | + | tig0030133:42126-42145 | None:intergenic | 60.0% | |
| ! | GTGATGGAGGACTGCCGTGA+AGG | + | tig0030133:42129-42148 | None:intergenic | 60.0% |
| GGACTGCCTGGAGGATTTCC+TGG | + | tig0030133:42314-42333 | None:intergenic | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | tig0030133:42314-42333 | Msa1442620:intron | 60.0% | |
| GGATTTCCTGGACTGCCTGG+AGG | + | tig0030133:42323-42342 | None:intergenic | 60.0% | |
| GGATCTAGAGGACAGCCTGG+AGG | + | tig0030133:42461-42480 | None:intergenic | 60.0% | |
| GGACTGCCTGGAGGATTTCC+TGG | + | tig0030133:42314-42333 | None:intergenic | 60.0% | |
| GTAGGGTCTAGAGGACTGCC+TGG | + | tig0030133:42500-42519 | None:intergenic | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | tig0030133:42314-42333 | Msa1442620:intron | 60.0% | |
| GGATTTCCTGGACTGCCTGG+AGG | + | tig0030133:42323-42342 | None:intergenic | 60.0% | |
| GGACTGCCTGGAGGATTTCC+TGG | + | tig0030133:42314-42333 | None:intergenic | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | tig0030133:42314-42333 | Msa1442620:intron | 60.0% | |
| GGATTTCCTGGACTGCCTGG+AGG | + | tig0030133:42323-42342 | None:intergenic | 60.0% | |
| ! | GGTGGATTTCCTGGACTGCC+TGG | + | tig0030133:42581-42600 | None:intergenic | 60.0% |
| ACTGGAAGGCTCCCACCTTC+GGG | - | tig0030133:42689-42708 | Msa1442620:intron | 60.0% | |
| AGGTTCCCGCCAGTTGGAAC+GGG | - | tig0030133:43648-43667 | Msa1442620:intron | 60.0% | |
| TAGTGCCCGTTCCAACTGGC+GGG | + | tig0030133:43656-43675 | None:intergenic | 60.0% | |
| CGGATAGTGCCCGTTCCAAC+TGG | + | tig0030133:43660-43679 | None:intergenic | 60.0% | |
| TCTCGGTAAGCGTGCGAGTG+AGG | - | tig0030133:43870-43889 | Msa1442620:intron | 60.0% | |
| GTTGGGATGGGTGACCTACC+GGG | - | tig0030133:43917-43936 | Msa1442620:intron | 60.0% | |
| TCTCGGTAAGCGTGCGAGTG+AGG | - | tig0030133:43870-43889 | Msa1442620:intron | 60.0% | |
| GGGTCTAGAGGACTGCCTGG+AGG | + | tig0030133:42497-42516 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030133 | gene | 41813 | 45467 | 41813 | ID=Msa1442620;Name=Msa1442620 |
| tig0030133 | mRNA | 41813 | 45467 | 41813 | ID=Msa1442620-mRNA-1;Parent=Msa1442620;Name=Msa1442620-mRNA-1;_AED=0.70;_eAED=0.72;_QI=0|0|0|0.2|1|1|5|0|199 |
| tig0030133 | exon | 45462 | 45467 | 45462 | ID=Msa1442620-mRNA-1:exon:13411;Parent=Msa1442620-mRNA-1 |
| tig0030133 | exon | 45065 | 45251 | 45065 | ID=Msa1442620-mRNA-1:exon:13410;Parent=Msa1442620-mRNA-1 |
| tig0030133 | exon | 44879 | 45013 | 44879 | ID=Msa1442620-mRNA-1:exon:13409;Parent=Msa1442620-mRNA-1 |
| tig0030133 | exon | 44570 | 44815 | 44570 | ID=Msa1442620-mRNA-1:exon:13408;Parent=Msa1442620-mRNA-1 |
| tig0030133 | exon | 41813 | 41838 | 41813 | ID=Msa1442620-mRNA-1:exon:13407;Parent=Msa1442620-mRNA-1 |
| tig0030133 | CDS | 45462 | 45467 | 45462 | ID=Msa1442620-mRNA-1:cds;Parent=Msa1442620-mRNA-1 |
| tig0030133 | CDS | 45065 | 45251 | 45065 | ID=Msa1442620-mRNA-1:cds;Parent=Msa1442620-mRNA-1 |
| tig0030133 | CDS | 44879 | 45013 | 44879 | ID=Msa1442620-mRNA-1:cds;Parent=Msa1442620-mRNA-1 |
| tig0030133 | CDS | 44570 | 44815 | 44570 | ID=Msa1442620-mRNA-1:cds;Parent=Msa1442620-mRNA-1 |
| tig0030133 | CDS | 41813 | 41838 | 41813 | ID=Msa1442620-mRNA-1:cds;Parent=Msa1442620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
