Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292040 | G7K2Y4 | 51.200 | 125 | 47 | 1 | 278 | 388 | 9 | 133 | 3.92e-30 | 126 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003040 | Msa1292040 | 0.801672 | 8.060982e-49 | -8.615850e-47 |
| Msa0194380 | Msa1292040 | 0.807306 | 5.392070e-50 | -8.615850e-47 |
| Msa0236110 | Msa1292040 | 0.845970 | 2.913022e-59 | -8.615850e-47 |
| Msa1228190 | Msa1292040 | 0.819799 | 9.607928e-53 | -8.615850e-47 |
| Msa1271260 | Msa1292040 | 0.828496 | 8.706112e-55 | -8.615850e-47 |
| Msa1292040 | Msa1345420 | 0.837087 | 6.392734e-57 | -8.615850e-47 |
| Msa1292040 | Msa1421550 | 0.810686 | 1.019057e-50 | -8.615850e-47 |
| Msa1292040 | Msa1435480 | 0.807218 | 5.627553e-50 | -8.615850e-47 |
| Msa1292040 | Msa1442620 | 0.845479 | 3.957764e-59 | -8.615850e-47 |
| Msa1292040 | Msa1442630 | 0.867655 | 1.166220e-65 | -8.615850e-47 |
| Msa0999340 | Msa1292040 | 0.811718 | 6.084459e-51 | -8.615850e-47 |
| Msa0999350 | Msa1292040 | 0.819371 | 1.203274e-52 | -8.615850e-47 |
| Msa0999360 | Msa1292040 | 0.805996 | 1.019350e-49 | -8.615850e-47 |
| Msa0999400 | Msa1292040 | 0.809583 | 1.761648e-50 | -8.615850e-47 |
| Msa0273990 | Msa1292040 | 0.823360 | 1.444360e-53 | -8.615850e-47 |
| Msa0311790 | Msa1292040 | 0.808990 | 2.360145e-50 | -8.615850e-47 |
| Msa0314630 | Msa1292040 | 0.844543 | 7.084003e-59 | -8.615850e-47 |
| Msa0322860 | Msa1292040 | 0.811379 | 7.211951e-51 | -8.615850e-47 |
| Msa0331530 | Msa1292040 | 0.802261 | 6.101711e-49 | -8.615850e-47 |
| Msa1174110 | Msa1292040 | 0.811970 | 5.363791e-51 | -8.615850e-47 |
| Msa0520510 | Msa1292040 | 0.800075 | 1.708399e-48 | -8.615850e-47 |
| Msa0946210 | Msa1292040 | 0.802048 | 6.747495e-49 | -8.615850e-47 |
| Msa0979510 | Msa1292040 | 0.830994 | 2.145818e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292040 | MtrunA17_Chr1g0173691 | 48.980 | 147 | 39 | 2 | 278 | 388 | 87 | 233 | 2.13e-32 | 125 |
| Msa1292040 | MtrunA17_Chr7g0269671 | 43.919 | 148 | 46 | 2 | 278 | 388 | 87 | 234 | 4.24e-24 | 101 |
| Msa1292040 | MtrunA17_Chr8g0366701 | 90.476 | 42 | 4 | 0 | 20 | 61 | 2 | 43 | 2.55e-18 | 80.1 |
| Msa1292040 | MtrunA17_Chr3g0100401 | 63.333 | 60 | 22 | 0 | 329 | 388 | 1 | 60 | 7.58e-18 | 79.3 |
| Msa1292040 | MtrunA17_Chr8g0366641 | 90.476 | 42 | 4 | 0 | 20 | 61 | 2 | 43 | 3.68e-17 | 79.7 |
| Msa1292040 | MtrunA17_Chr1g0206511 | 58.333 | 60 | 25 | 0 | 329 | 388 | 1 | 60 | 6.68e-15 | 72.8 |
| Msa1292040 | MtrunA17_Chr7g0248821 | 57.627 | 59 | 25 | 0 | 330 | 388 | 1 | 59 | 1.58e-13 | 68.9 |
| Msa1292040 | MtrunA17_Chr8g0366631 | 60.000 | 75 | 21 | 3 | 36 | 107 | 1 | 69 | 1.68e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 122 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGTTGGATTTGATTCT+AGG | 0.238754 | 8_3:+47801614 | Msa1292040:CDS |
| CGACAGCCTGAAGGATTTCC+TGG | 0.259925 | 8_3:+47799711 | Msa1292040:CDS |
| TCAATTGTGTTGAGAAATTC+AGG | 0.271683 | 8_3:-47801716 | None:intergenic |
| TCTTATTGGGTCTTGGGTAT+TGG | 0.275912 | 8_3:+47801494 | Msa1292040:CDS |
| GTAGGATCTGGTGGATTTCC+TGG | 0.299465 | 8_3:+47799456 | Msa1292040:CDS |
| GTAGGATCTGGTGGATTTCC+TGG | 0.299465 | 8_3:+47799501 | Msa1292040:CDS |
| CTTCCAGTTCCTAATGAAAA+AGG | 0.302916 | 8_3:+47799369 | Msa1292040:CDS |
| AATTTGAGTTTGTGATTTGC+AGG | 0.307586 | 8_3:-47801749 | None:intergenic |
| AATCCTTCAGGTAGTCCTTT+AGG | 0.308295 | 8_3:-47799786 | None:intergenic |
| TGCCAATTTGCACTACTTCA+TGG | 0.310582 | 8_3:+47799130 | Msa1292040:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | 8_3:+47799477 | Msa1292040:CDS |
| GGACTGCCTGGAGGATTTCC+TGG | 0.316635 | 8_3:+47799732 | Msa1292040:CDS |
| CATTGCTCTCTTTGTGCTGT+TGG | 0.329983 | 8_3:+47799257 | Msa1292040:CDS |
| CTCAACACAATTGATACTTC+TGG | 0.336636 | 8_3:+47801725 | Msa1292040:CDS |
| AACTGGAAGGCTCCCACCTC+CGG | 0.337308 | 8_3:-47799355 | None:intergenic |
| AGACTGCCTGGAGGATTTCC+TGG | 0.343541 | 8_3:+47799432 | Msa1292040:CDS |
| TGCCGTGAAGGAGGCTATAA+TGG | 0.347763 | 8_3:+47799929 | Msa1292040:CDS |
| TTCCTGAGACAGGTATTTAT+AGG | 0.351071 | 8_3:-47799165 | None:intergenic |
| GTAGGATCTGGAGGATTTCC+TGG | 0.353215 | 8_3:+47799636 | Msa1292040:CDS |
| GAACTTTCAAAGTTGCCATA+TGG | 0.369580 | 8_3:-47799230 | None:intergenic |
| CAACAGCCTGGAGGATTTCC+TGG | 0.371395 | 8_3:+47799612 | Msa1292040:CDS |
| CTTGATATAAGTAAATTAGA+TGG | 0.372826 | 8_3:-47801566 | None:intergenic |
| GACCATGAAGTAGTGCAAAT+TGG | 0.372827 | 8_3:-47799132 | None:intergenic |
| AGACTGCCTGGAGGATTTCC+TGG | 0.380076 | 8_3:+47799558 | Msa1292040:CDS |
| TGGGTCTTGGGTATTGGTGA+TGG | 0.380703 | 8_3:+47801500 | Msa1292040:CDS |
| ATTGCTCTCTTTGTGCTGTT+GGG | 0.382762 | 8_3:+47799258 | Msa1292040:CDS |
| AAACTGTCTGGTATAGTATC+TGG | 0.388710 | 8_3:+47799855 | Msa1292040:CDS |
| GGACTACCTGAAGGATTTCC+TGG | 0.390640 | 8_3:+47799792 | Msa1292040:CDS |
| TGGTGTAGGATCTAGAGGTT+TGG | 0.391368 | 8_3:+47799812 | Msa1292040:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.393975 | 8_3:+47799624 | Msa1292040:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.393975 | 8_3:+47799744 | Msa1292040:CDS |
| GGTGGATTTCCTGGACTGCC+TGG | 0.395309 | 8_3:+47799465 | Msa1292040:CDS |
| GGTGGATTTCCTGGACTGCC+TGG | 0.395309 | 8_3:+47799510 | Msa1292040:CDS |
| CCAACCAGGTGAAGGAGGTT+TGG | 0.397385 | 8_3:+47799894 | Msa1292040:intron |
| GAAGGATTTCCTGGACTGCC+TGG | 0.404463 | 8_3:+47799720 | Msa1292040:CDS |
| GGTTTATAGCCGTCTTGATC+AGG | 0.404847 | 8_3:-47799333 | None:intergenic |
| CAACCAGGTGAAGGAGGTTT+GGG | 0.421869 | 8_3:+47799895 | Msa1292040:intron |
| GGCAGTCCAGGAAATCCTTC+AGG | 0.429276 | 8_3:-47799717 | None:intergenic |
| GGATTTCCTGGTGTAGGATC+TGG | 0.436990 | 8_3:+47799444 | Msa1292040:CDS |
| GGATTTCCTGGTGTAGGATC+TGG | 0.436990 | 8_3:+47799489 | Msa1292040:CDS |
| GGTGTAGGATCTAGAGGTTT+GGG | 0.437013 | 8_3:+47799813 | Msa1292040:CDS |
| TTGGGAGATGAAAAGATACT+TGG | 0.441136 | 8_3:+47799831 | Msa1292040:CDS |
| GGAGGATTTCCTGGACTACC+TGG | 0.443457 | 8_3:+47799645 | Msa1292040:CDS |
| TCAAATAAACAGTTATATGT+TGG | 0.445882 | 8_3:+47801601 | Msa1292040:CDS |
| TTCCATTATAGCCTCCTTCA+CGG | 0.446403 | 8_3:-47799931 | None:intergenic |
| GGGTCTTGGGTATTGGTGAT+GGG | 0.452448 | 8_3:+47801501 | Msa1292040:CDS |
| GGTATTGGTGATGGGACAAT+TGG | 0.453217 | 8_3:+47801509 | Msa1292040:CDS |
| CCTACACCAGGAAATCCTTC+AGG | 0.459539 | 8_3:-47799798 | None:intergenic |
| AAGATACTTGGAAAACTGTC+TGG | 0.461384 | 8_3:+47799843 | Msa1292040:CDS |
| CCAGGCTGTTGAACTCCTCC+AGG | 0.462116 | 8_3:-47799600 | None:intergenic |
| GGAGGATTTCCTAGACTGCC+TGG | 0.462654 | 8_3:+47799420 | Msa1292040:CDS |
| CACAAACTCAAATTAAAAGT+TGG | 0.464012 | 8_3:+47801758 | Msa1292040:CDS |
| GGTGAAGGAGGTTTGGGTGA+TGG | 0.466518 | 8_3:+47799901 | Msa1292040:intron |
| TTCCTATAAATACCTGTCTC+AGG | 0.473928 | 8_3:+47799163 | Msa1292040:CDS |
| GAATCAAACAAAATTCCATA+TGG | 0.490488 | 8_3:+47799215 | Msa1292040:CDS |
| ACTGGAAGGCTCCCACCTCC+GGG | 0.499976 | 8_3:-47799354 | None:intergenic |
| GTAGGATCTAGAAGACTGCC+TGG | 0.502667 | 8_3:+47799546 | Msa1292040:CDS |
| GACGGCTATAAACCCGGAGG+TGG | 0.503063 | 8_3:+47799342 | Msa1292040:CDS |
| GAAGGAGGTTTGGGTGATGG+AGG | 0.506051 | 8_3:+47799904 | Msa1292040:CDS |
| GGTTTCAAGATTCCTGAGAC+AGG | 0.519155 | 8_3:-47799175 | None:intergenic |
| AATGGAAGTGATAGTAATGA+TGG | 0.519897 | 8_3:+47799947 | Msa1292040:CDS |
| GAGTCTCAGCGATGTTCTAA+AGG | 0.523198 | 8_3:+47801780 | Msa1292040:CDS |
| TTTCCTGGTGTAGGATCTAG+AGG | 0.531302 | 8_3:+47799807 | Msa1292040:CDS |
| TCAGGCTGTCGAAATCCTCC+AGG | 0.531513 | 8_3:-47799699 | None:intergenic |
| TGTCCTCTAGATCCTACATC+AGG | 0.534868 | 8_3:-47799675 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | 8_3:-47799474 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.537055 | 8_3:-47799729 | None:intergenic |
| GGAAATCCTCCAGGTAGTCC+AGG | 0.538987 | 8_3:-47799654 | None:intergenic |
| GGAAATCCTCCAGGCAGTCC+AGG | 0.545859 | 8_3:-47799519 | None:intergenic |
| TTTCCTGGTGTAGGATCTGG+TGG | 0.550376 | 8_3:+47799447 | Msa1292040:CDS |
| TTTCCTGGTGTAGGATCTGG+TGG | 0.550376 | 8_3:+47799492 | Msa1292040:CDS |
| GGAAATCCTCCAGGCAGTCT+AGG | 0.552421 | 8_3:-47799429 | None:intergenic |
| CCTGGAGGAGTTCAACAGCC+TGG | 0.553305 | 8_3:+47799600 | Msa1292040:CDS |
| GTAGGATCTAGAGGACAGCC+TGG | 0.555583 | 8_3:+47799681 | Msa1292040:CDS |
| GTAGGATCTAGAGGACAGCC+TGG | 0.567286 | 8_3:+47799582 | Msa1292040:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8_3:+47799438 | Msa1292040:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8_3:+47799483 | Msa1292040:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8_3:+47799564 | Msa1292040:CDS |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.569135 | 8_3:+47799738 | Msa1292040:CDS |
| ATTCTTACACAACTGAGTTG+TGG | 0.574804 | 8_3:-47799196 | None:intergenic |
| TTTCCTGATGTAGGATCTAG+AGG | 0.576832 | 8_3:+47799672 | Msa1292040:CDS |
| GGAGGATTTCGACAGCCTGA+AGG | 0.577479 | 8_3:+47799702 | Msa1292040:CDS |
| CCTACACCAGGAAATCCTCC+AGG | 0.591190 | 8_3:-47799618 | None:intergenic |
| TTTCCTGGTGTAGGATCTAG+AGG | 0.592608 | 8_3:+47799573 | Msa1292040:CDS |
| CCTACATCAGGAAATCCTCC+AGG | 0.594335 | 8_3:-47799663 | None:intergenic |
| CCTGGAGGATTTCCTGATGT+AGG | 0.594745 | 8_3:+47799663 | Msa1292040:CDS |
| TTTCCTGGTGTAGGATCTGG+AGG | 0.596162 | 8_3:+47799627 | Msa1292040:CDS |
| TTTCCTGGTGTAGGATCTGG+AGG | 0.596162 | 8_3:+47799747 | Msa1292040:CDS |
| AATCCTCCAGATCCTACACC+AGG | 0.600292 | 8_3:-47799630 | None:intergenic |
| GATCAAGACGGCTATAAACC+CGG | 0.601687 | 8_3:+47799336 | Msa1292040:CDS |
| ATGGAGGACTGCCGTGAAGG+AGG | 0.601822 | 8_3:+47799920 | Msa1292040:CDS |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8_3:-47799438 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8_3:-47799483 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8_3:-47799564 | None:intergenic |
| CCTACACCAGGAAATCCTCC+AGG | 0.605765 | 8_3:-47799738 | None:intergenic |
| AATCCTCCAGATCCTACACC+AGG | 0.612832 | 8_3:-47799750 | None:intergenic |
| CCTGGAGGATTTCCTGGTGT+AGG | 0.612965 | 8_3:+47799618 | Msa1292040:CDS |
| GTGATGGAGGACTGCCGTGA+AGG | 0.613144 | 8_3:+47799917 | Msa1292040:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.614082 | 8_3:+47799468 | Msa1292040:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.614082 | 8_3:+47799513 | Msa1292040:CDS |
| TGTTGAGAAATTCAGGAGTG+TGG | 0.616404 | 8_3:-47801709 | None:intergenic |
| TGTCCTCTAGATCCTACACC+AGG | 0.624714 | 8_3:-47799576 | None:intergenic |
| AATCCACCAGATCCTACACC+AGG | 0.625031 | 8_3:-47799450 | None:intergenic |
| AATCCACCAGATCCTACACC+AGG | 0.625031 | 8_3:-47799495 | None:intergenic |
| CCTGAAGGATTTCCTGGTGT+AGG | 0.627039 | 8_3:+47799798 | Msa1292040:CDS |
| CCTGGAGGATTTCCTAGTGT+AGG | 0.631413 | 8_3:+47799528 | Msa1292040:CDS |
| CTTCCTAAAGGACTACCTGA+AGG | 0.635827 | 8_3:+47799783 | Msa1292040:CDS |
| GGATTTCCTGGACTGCCTGG+AGG | 0.637581 | 8_3:+47799723 | Msa1292040:CDS |
| AAACCTCTAGATCCTACACC+AGG | 0.638088 | 8_3:-47799810 | None:intergenic |
| GTGTACCAACCAGGTGAAGG+AGG | 0.641507 | 8_3:+47799889 | Msa1292040:intron |
| CCTACACTAGGAAATCCTCC+AGG | 0.647327 | 8_3:-47799528 | None:intergenic |
| AGTCTTCTAGATCCTACACT+AGG | 0.649454 | 8_3:-47799540 | None:intergenic |
| GATTCTGATCCTGATCAAGA+CGG | 0.650207 | 8_3:+47799324 | Msa1292040:CDS |
| ACGGCTATAAACCCGGAGGT+GGG | 0.662994 | 8_3:+47799343 | Msa1292040:CDS |
| GGATTTCCTGGACTACCTGG+AGG | 0.671330 | 8_3:+47799648 | Msa1292040:CDS |
| AATGATGGCATTGTACCTGA+TGG | 0.683427 | 8_3:+47799962 | Msa1292040:CDS |
| GGATCTAGAGGACAGCCTGG+AGG | 0.698944 | 8_3:+47799585 | Msa1292040:CDS |
| GGATCTAGAGGACAGCCTGG+AGG | 0.718203 | 8_3:+47799684 | Msa1292040:CDS |
| GGATCTAGAAGACTGCCTGG+AGG | 0.728237 | 8_3:+47799549 | Msa1292040:CDS |
| GGATTTCCTAGACTGCCTGG+AGG | 0.743827 | 8_3:+47799423 | Msa1292040:CDS |
| GGAGGAGTTCAACAGCCTGG+AGG | 0.746898 | 8_3:+47799603 | Msa1292040:CDS |
| CAAGACGGCTATAAACCCGG+AGG | 0.794224 | 8_3:+47799339 | Msa1292040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTTTAAATCTTAT+AGG | - | chr8_3:47800366-47800385 | None:intergenic | 10.0% |
| !! | CTATAAGATTTAAAAAAAAA+TGG | + | chr8_3:47800364-47800383 | Msa1292040:intron | 10.0% |
| !! | ATTTATGAAGATATCATTAT+AGG | - | chr8_3:47799999-47800018 | None:intergenic | 15.0% |
| !! | TATATTCTACAGAATATATA+TGG | - | chr8_3:47800050-47800069 | None:intergenic | 15.0% |
| !! | AAAGAAATTACAAAAATGAA+AGG | - | chr8_3:47800215-47800234 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAATTTCTTTTTG+TGG | + | chr8_3:47800218-47800237 | Msa1292040:intron | 15.0% |
| !!! | TAAATGCTTTTTTCAAATTT+TGG | + | chr8_3:47800627-47800646 | Msa1292040:intron | 15.0% |
| !! | AAATATCACACTAAAAAAAA+AGG | - | chr8_3:47801194-47801213 | None:intergenic | 15.0% |
| !!! | AAAGAAAATTGTTTTCTTAT+TGG | + | chr8_3:47801480-47801499 | Msa1292040:CDS | 15.0% |
| !!! | AAGAAAATTGTTTTCTTATT+GGG | + | chr8_3:47801481-47801500 | Msa1292040:CDS | 15.0% |
| !! | GAATATATATGGTTATTAGT+AGG | - | chr8_3:47800039-47800058 | None:intergenic | 20.0% |
| !! | TAAGAATGAAAACAAATGAA+GGG | + | chr8_3:47800280-47800299 | Msa1292040:intron | 20.0% |
| !!! | ACTTACTTTAAAAGCTTATT+AGG | + | chr8_3:47800516-47800535 | Msa1292040:intron | 20.0% |
| !!! | TTTGAAAAAAGCATTTAATG+AGG | - | chr8_3:47800624-47800643 | None:intergenic | 20.0% |
| !! | TTTGACAAAAGAAATTAATG+AGG | - | chr8_3:47800838-47800857 | None:intergenic | 20.0% |
| !! | ATTACCTATTGTCTTTATTA+TGG | + | chr8_3:47801271-47801290 | Msa1292040:intron | 20.0% |
| !! | TATTAATTCTTCGTATCTTT+GGG | + | chr8_3:47801384-47801403 | Msa1292040:intron | 20.0% |
| !! | AAAAACATAAGACTTCTAAA+TGG | + | chr8_3:47801434-47801453 | Msa1292040:intron | 20.0% |
| !! | CTTGATATAAGTAAATTAGA+TGG | - | chr8_3:47801569-47801588 | None:intergenic | 20.0% |
| !! | TCAAATAAACAGTTATATGT+TGG | + | chr8_3:47801601-47801620 | Msa1292040:CDS | 20.0% |
| ! | GAATCAAACAAAATTCCATA+TGG | + | chr8_3:47799215-47799234 | Msa1292040:CDS | 25.0% |
| ! | TGAAAGGAAATATAATCGTT+CGG | - | chr8_3:47800199-47800218 | None:intergenic | 25.0% |
| ! | GTAAGAATGAAAACAAATGA+AGG | + | chr8_3:47800279-47800298 | Msa1292040:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr8_3:47800708-47800727 | Msa1292040:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr8_3:47800708-47800727 | None:intergenic | 25.0% |
| !!! | GTAGCTGATTTTTTTTTGAA+AGG | + | chr8_3:47801084-47801103 | Msa1292040:intron | 25.0% |
| !! | TTATAGTATGTCTGAAACTT+TGG | + | chr8_3:47801155-47801174 | Msa1292040:intron | 25.0% |
| ! | TCTACCATAATAAAGACAAT+AGG | - | chr8_3:47801278-47801297 | None:intergenic | 25.0% |
| !!! | AGAAGGAGAACTTATTTTTT+TGG | - | chr8_3:47801362-47801381 | None:intergenic | 25.0% |
| ! | TACGAAGAATTAATAGTAGA+AGG | - | chr8_3:47801379-47801398 | None:intergenic | 25.0% |
| ! | CTATTAATTCTTCGTATCTT+TGG | + | chr8_3:47801383-47801402 | Msa1292040:intron | 25.0% |
| ! | TATATGTTGGATTTGATTCT+AGG | + | chr8_3:47801614-47801633 | Msa1292040:CDS | 25.0% |
| ! | CACAAACTCAAATTAAAAGT+TGG | + | chr8_3:47801758-47801777 | Msa1292040:CDS | 25.0% |
| AATGGAAGTGATAGTAATGA+TGG | + | chr8_3:47799947-47799966 | Msa1292040:CDS | 30.0% | |
| AAGAATAAGATCCTGTTGTA+AGG | + | chr8_3:47800075-47800094 | Msa1292040:intron | 30.0% | |
| ATTATAAGCATCCTTACAAC+AGG | - | chr8_3:47800089-47800108 | None:intergenic | 30.0% | |
| TTCTTCTCGAACAATTTCTA+CGG | - | chr8_3:47800331-47800350 | None:intergenic | 30.0% | |
| GGAAACTAACAAAGCTATTA+GGG | - | chr8_3:47800558-47800577 | None:intergenic | 30.0% | |
| ! | GTTTTGCTTATAATAGTGAC+CGG | - | chr8_3:47800782-47800801 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr8_3:47800782-47800801 | Msa1292040:intron | 30.0% |
| GAATCATTACGTTAAGTAGT+TGG | - | chr8_3:47800919-47800938 | None:intergenic | 30.0% | |
| CATGCAATGATCTTGAAAAT+AGG | + | chr8_3:47801012-47801031 | Msa1292040:intron | 30.0% | |
| !! | TTTTGAAAGGAATTTGTAGC+TGG | + | chr8_3:47801097-47801116 | Msa1292040:intron | 30.0% |
| !! | GTATCTTTGGGAAATTTTTG+AGG | + | chr8_3:47801396-47801415 | Msa1292040:intron | 30.0% |
| ! | ATTGTTTTCTTATTGGGTCT+TGG | + | chr8_3:47801487-47801506 | Msa1292040:CDS | 30.0% |
| ! | TTGTTTTCTTATTGGGTCTT+GGG | + | chr8_3:47801488-47801507 | Msa1292040:CDS | 30.0% |
| TCAATTGTGTTGAGAAATTC+AGG | - | chr8_3:47801719-47801738 | None:intergenic | 30.0% | |
| ! | AATTTGAGTTTGTGATTTGC+AGG | - | chr8_3:47801752-47801771 | None:intergenic | 30.0% |
| TTCCTATAAATACCTGTCTC+AGG | + | chr8_3:47799163-47799182 | Msa1292040:CDS | 35.0% | |
| TTCCTGAGACAGGTATTTAT+AGG | - | chr8_3:47799168-47799187 | None:intergenic | 35.0% | |
| ATTCTTACACAACTGAGTTG+TGG | - | chr8_3:47799199-47799218 | None:intergenic | 35.0% | |
| GAACTTTCAAAGTTGCCATA+TGG | - | chr8_3:47799233-47799252 | None:intergenic | 35.0% | |
| !! | CTTTTTCATTAGGAACTGGA+AGG | - | chr8_3:47799371-47799390 | None:intergenic | 35.0% |
| CTTCCAGTTCCTAATGAAAA+AGG | + | chr8_3:47799369-47799388 | Msa1292040:CDS | 35.0% | |
| !! | AGTCCTTTTTCATTAGGAAC+TGG | - | chr8_3:47799375-47799394 | None:intergenic | 35.0% |
| GTTCCTAATGAAAAAGGACT+TGG | + | chr8_3:47799375-47799394 | Msa1292040:CDS | 35.0% | |
| !!! | AAAGGACTTGGAGGATTTTT+TGG | + | chr8_3:47799387-47799406 | Msa1292040:CDS | 35.0% |
| !!! | GGATTTTTTGGTGTAGGATT+TGG | + | chr8_3:47799399-47799418 | Msa1292040:CDS | 35.0% |
| !!! | TTTTTTGGTGTAGGATTTGG+AGG | + | chr8_3:47799402-47799421 | Msa1292040:CDS | 35.0% |
| TTGGGAGATGAAAAGATACT+TGG | + | chr8_3:47799831-47799850 | Msa1292040:CDS | 35.0% | |
| AAGATACTTGGAAAACTGTC+TGG | + | chr8_3:47799843-47799862 | Msa1292040:CDS | 35.0% | |
| AAACTGTCTGGTATAGTATC+TGG | + | chr8_3:47799855-47799874 | Msa1292040:CDS | 35.0% | |
| AAGGAAATATAATCGTTCGG+TGG | - | chr8_3:47800196-47800215 | None:intergenic | 35.0% | |
| GGGAAACTAACAAAGCTATT+AGG | - | chr8_3:47800559-47800578 | None:intergenic | 35.0% | |
| TAGTGATGACATGTGCATAT+AGG | - | chr8_3:47800882-47800901 | None:intergenic | 35.0% | |
| GGTATGCATGAGAAAACAAA+AGG | - | chr8_3:47800952-47800971 | None:intergenic | 35.0% | |
| GGAATTTGTAGCTGGTTATA+TGG | + | chr8_3:47801105-47801124 | Msa1292040:intron | 35.0% | |
| ! | TTTTTGACCCATGTGATGTA+GGG | - | chr8_3:47801252-47801271 | None:intergenic | 35.0% |
| ! | ATTTTTGACCCATGTGATGT+AGG | - | chr8_3:47801253-47801272 | None:intergenic | 35.0% |
| TGCTTATTAAATGCGTCGTA+CGG | - | chr8_3:47801307-47801326 | None:intergenic | 35.0% | |
| CTCAACACAATTGATACTTC+TGG | + | chr8_3:47801725-47801744 | Msa1292040:CDS | 35.0% | |
| TGCCAATTTGCACTACTTCA+TGG | + | chr8_3:47799130-47799149 | Msa1292040:CDS | 40.0% | |
| GACCATGAAGTAGTGCAAAT+TGG | - | chr8_3:47799135-47799154 | None:intergenic | 40.0% | |
| ! | ATTGCTCTCTTTGTGCTGTT+GGG | + | chr8_3:47799258-47799277 | Msa1292040:CDS | 40.0% |
| GATTCTGATCCTGATCAAGA+CGG | + | chr8_3:47799324-47799343 | Msa1292040:CDS | 40.0% | |
| !! | CCTCCAAGTCCTTTTTCATT+AGG | - | chr8_3:47799381-47799400 | None:intergenic | 40.0% |
| CCTAATGAAAAAGGACTTGG+AGG | + | chr8_3:47799378-47799397 | Msa1292040:CDS | 40.0% | |
| !!! | CTTGGAGGATTTTTTGGTGT+AGG | + | chr8_3:47799393-47799412 | Msa1292040:CDS | 40.0% |
| AGTCTTCTAGATCCTACACT+AGG | - | chr8_3:47799543-47799562 | None:intergenic | 40.0% | |
| TTTCCTGATGTAGGATCTAG+AGG | + | chr8_3:47799672-47799691 | Msa1292040:CDS | 40.0% | |
| !! | TTTTCTGGAGGACTTCCTAA+AGG | + | chr8_3:47799771-47799790 | Msa1292040:CDS | 40.0% |
| AATCCTTCAGGTAGTCCTTT+AGG | - | chr8_3:47799789-47799808 | None:intergenic | 40.0% | |
| TTCCATTATAGCCTCCTTCA+CGG | - | chr8_3:47799934-47799953 | None:intergenic | 40.0% | |
| AATGATGGCATTGTACCTGA+TGG | + | chr8_3:47799962-47799981 | Msa1292040:CDS | 40.0% | |
| GATCATCGAGCATCAACATA+AGG | + | chr8_3:47800409-47800428 | Msa1292040:intron | 40.0% | |
| CATACCTAGGTTTAGTGCTT+GGG | - | chr8_3:47800583-47800602 | None:intergenic | 40.0% | |
| ACATACCTAGGTTTAGTGCT+TGG | - | chr8_3:47800584-47800603 | None:intergenic | 40.0% | |
| AAAGCTTGCAACACATACCT+AGG | - | chr8_3:47800596-47800615 | None:intergenic | 40.0% | |
| ! | AGGTATGTGTTGCAAGCTTT+TGG | + | chr8_3:47800596-47800615 | Msa1292040:intron | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_3:47800786-47800805 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_3:47800785-47800804 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_3:47800785-47800804 | Msa1292040:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_3:47800786-47800805 | Msa1292040:intron | 40.0% | |
| ! | GTATGTGTGTTGCAAGCTTT+TGG | + | chr8_3:47800810-47800829 | Msa1292040:intron | 40.0% |
| GATGACATGTGCATATAGGA+GGG | - | chr8_3:47800878-47800897 | None:intergenic | 40.0% | |
| TGATGACATGTGCATATAGG+AGG | - | chr8_3:47800879-47800898 | None:intergenic | 40.0% | |
| GCATACCGAAATAATGATCC+TGG | + | chr8_3:47800965-47800984 | Msa1292040:intron | 40.0% | |
| GAGAGCCAGGATCATTATTT+CGG | - | chr8_3:47800973-47800992 | None:intergenic | 40.0% | |
| TCATCTATATGTAGAGAGCC+AGG | - | chr8_3:47800986-47801005 | None:intergenic | 40.0% | |
| CTGGTTATATGGTATACGCA+AGG | + | chr8_3:47801116-47801135 | Msa1292040:intron | 40.0% | |
| TTGATAGACCCTACATCACA+TGG | + | chr8_3:47801241-47801260 | Msa1292040:intron | 40.0% | |
| TGATAGACCCTACATCACAT+GGG | + | chr8_3:47801242-47801261 | Msa1292040:intron | 40.0% | |
| GCTTATTAAATGCGTCGTAC+GGG | - | chr8_3:47801306-47801325 | None:intergenic | 40.0% | |
| TCTTATTGGGTCTTGGGTAT+TGG | + | chr8_3:47801494-47801513 | Msa1292040:CDS | 40.0% | |
| !! | CCATCCATTTTTCGTGAAAG+CGG | - | chr8_3:47801671-47801690 | None:intergenic | 40.0% |
| TGTTGAGAAATTCAGGAGTG+TGG | - | chr8_3:47801712-47801731 | None:intergenic | 40.0% | |
| GGTTTCAAGATTCCTGAGAC+AGG | - | chr8_3:47799178-47799197 | None:intergenic | 45.0% | |
| CATTGCTCTCTTTGTGCTGT+TGG | + | chr8_3:47799257-47799276 | Msa1292040:CDS | 45.0% | |
| GGTTTATAGCCGTCTTGATC+AGG | - | chr8_3:47799336-47799355 | None:intergenic | 45.0% | |
| GATCAAGACGGCTATAAACC+CGG | + | chr8_3:47799336-47799355 | Msa1292040:CDS | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+AGG | + | chr8_3:47799573-47799592 | Msa1292040:CDS | 45.0% | |
| TGTCCTCTAGATCCTACATC+AGG | - | chr8_3:47799678-47799697 | None:intergenic | 45.0% | |
| ! | GTAGGATCTGGAGGATTTTC+TGG | + | chr8_3:47799756-47799775 | Msa1292040:CDS | 45.0% |
| CTTCCTAAAGGACTACCTGA+AGG | + | chr8_3:47799783-47799802 | Msa1292040:CDS | 45.0% | |
| TTTCCTGGTGTAGGATCTAG+AGG | + | chr8_3:47799573-47799592 | Msa1292040:CDS | 45.0% | |
| AAACCTCTAGATCCTACACC+AGG | - | chr8_3:47799813-47799832 | None:intergenic | 45.0% | |
| TGGTGTAGGATCTAGAGGTT+TGG | + | chr8_3:47799812-47799831 | Msa1292040:CDS | 45.0% | |
| GGTGTAGGATCTAGAGGTTT+GGG | + | chr8_3:47799813-47799832 | Msa1292040:CDS | 45.0% | |
| !! | ATAGTATCTGGAGTACTGCC+TGG | + | chr8_3:47799867-47799886 | Msa1292040:intron | 45.0% |
| TAGGCTTAGTGATGACCATC+AGG | - | chr8_3:47799980-47799999 | None:intergenic | 45.0% | |
| !! | GGTATTGGTGATGGGACAAT+TGG | + | chr8_3:47801509-47801528 | Msa1292040:CDS | 45.0% |
| ! | TTCGCCGCTTTCACGAAAAA+TGG | + | chr8_3:47801664-47801683 | Msa1292040:CDS | 45.0% |
| CCGCTTTCACGAAAAATGGA+TGG | + | chr8_3:47801668-47801687 | Msa1292040:CDS | 45.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | chr8_3:47799444-47799463 | Msa1292040:CDS | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+TGG | + | chr8_3:47799447-47799466 | Msa1292040:CDS | 50.0% | |
| AATCCACCAGATCCTACACC+AGG | - | chr8_3:47799453-47799472 | None:intergenic | 50.0% | |
| !! | GTAGGATCTGGTGGATTTCC+TGG | + | chr8_3:47799456-47799475 | Msa1292040:CDS | 50.0% |
| GGATTTCCTGGTGTAGGATC+TGG | + | chr8_3:47799444-47799463 | Msa1292040:CDS | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+TGG | + | chr8_3:47799447-47799466 | Msa1292040:CDS | 50.0% | |
| AATCCACCAGATCCTACACC+AGG | - | chr8_3:47799453-47799472 | None:intergenic | 50.0% | |
| !! | GTAGGATCTGGTGGATTTCC+TGG | + | chr8_3:47799456-47799475 | Msa1292040:CDS | 50.0% |
| CCTACACTAGGAAATCCTCC+AGG | - | chr8_3:47799531-47799550 | None:intergenic | 50.0% | |
| CCTGGAGGATTTCCTAGTGT+AGG | + | chr8_3:47799528-47799547 | Msa1292040:CDS | 50.0% | |
| GTAGGATCTAGAAGACTGCC+TGG | + | chr8_3:47799546-47799565 | Msa1292040:CDS | 50.0% | |
| TGTCCTCTAGATCCTACACC+AGG | - | chr8_3:47799579-47799598 | None:intergenic | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | chr8_3:47799444-47799463 | Msa1292040:CDS | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+AGG | + | chr8_3:47799447-47799466 | Msa1292040:CDS | 50.0% | |
| AATCCTCCAGATCCTACACC+AGG | - | chr8_3:47799633-47799652 | None:intergenic | 50.0% | |
| GTAGGATCTGGAGGATTTCC+TGG | + | chr8_3:47799636-47799655 | Msa1292040:CDS | 50.0% | |
| CCTACATCAGGAAATCCTCC+AGG | - | chr8_3:47799666-47799685 | None:intergenic | 50.0% | |
| CCTGGAGGATTTCCTGATGT+AGG | + | chr8_3:47799663-47799682 | Msa1292040:CDS | 50.0% | |
| GGATTTCCTGGTGTAGGATC+TGG | + | chr8_3:47799444-47799463 | Msa1292040:CDS | 50.0% | |
| TTTCCTGGTGTAGGATCTGG+AGG | + | chr8_3:47799447-47799466 | Msa1292040:CDS | 50.0% | |
| AATCCTCCAGATCCTACACC+AGG | - | chr8_3:47799633-47799652 | None:intergenic | 50.0% | |
| ! | GGATCTGGAGGATTTTCTGG+AGG | + | chr8_3:47799759-47799778 | Msa1292040:CDS | 50.0% |
| GGACTACCTGAAGGATTTCC+TGG | + | chr8_3:47799792-47799811 | Msa1292040:CDS | 50.0% | |
| CCTACACCAGGAAATCCTTC+AGG | - | chr8_3:47799801-47799820 | None:intergenic | 50.0% | |
| CCTGAAGGATTTCCTGGTGT+AGG | + | chr8_3:47799798-47799817 | Msa1292040:CDS | 50.0% | |
| CAACCAGGTGAAGGAGGTTT+GGG | + | chr8_3:47799895-47799914 | Msa1292040:intron | 50.0% | |
| TGCCGTGAAGGAGGCTATAA+TGG | + | chr8_3:47799929-47799948 | Msa1292040:CDS | 50.0% | |
| CCTAGGTTTAGTGCTTGGGA+GGG | - | chr8_3:47800579-47800598 | None:intergenic | 50.0% | |
| ACCTAGGTTTAGTGCTTGGG+AGG | - | chr8_3:47800580-47800599 | None:intergenic | 50.0% | |
| AGCACTAAACCTACACCCTC+CGG | + | chr8_3:47800651-47800670 | Msa1292040:intron | 50.0% | |
| ! | TAATAGTGACCGGAGGGTGT+AGG | - | chr8_3:47800792-47800811 | None:intergenic | 50.0% |
| TGCAACACACATACACCCTC+CGG | - | chr8_3:47800804-47800823 | None:intergenic | 50.0% | |
| !! | TGGGTCTTGGGTATTGGTGA+TGG | + | chr8_3:47801500-47801519 | Msa1292040:CDS | 50.0% |
| !! | GGGTCTTGGGTATTGGTGAT+GGG | + | chr8_3:47801501-47801520 | Msa1292040:CDS | 50.0% |
| CAAGACGGCTATAAACCCGG+AGG | + | chr8_3:47799339-47799358 | Msa1292040:CDS | 55.0% | |
| ACGGCTATAAACCCGGAGGT+GGG | + | chr8_3:47799343-47799362 | Msa1292040:CDS | 55.0% | |
| GGAGGATTTCCTAGACTGCC+TGG | + | chr8_3:47799420-47799439 | Msa1292040:CDS | 55.0% | |
| GGATTTCCTAGACTGCCTGG+AGG | + | chr8_3:47799423-47799442 | Msa1292040:CDS | 55.0% | |
| GGAAATCCTCCAGGCAGTCT+AGG | - | chr8_3:47799432-47799451 | None:intergenic | 55.0% | |
| AGACTGCCTGGAGGATTTCC+TGG | + | chr8_3:47799432-47799451 | Msa1292040:CDS | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | chr8_3:47799441-47799460 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | chr8_3:47799438-47799457 | Msa1292040:CDS | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | chr8_3:47799441-47799460 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | chr8_3:47799438-47799457 | Msa1292040:CDS | 55.0% | |
| GGATCTAGAAGACTGCCTGG+AGG | + | chr8_3:47799549-47799568 | Msa1292040:CDS | 55.0% | |
| AGACTGCCTGGAGGATTTCC+TGG | + | chr8_3:47799432-47799451 | Msa1292040:CDS | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | chr8_3:47799441-47799460 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | chr8_3:47799438-47799457 | Msa1292040:CDS | 55.0% | |
| GTAGGATCTAGAGGACAGCC+TGG | + | chr8_3:47799582-47799601 | Msa1292040:CDS | 55.0% | |
| CAACAGCCTGGAGGATTTCC+TGG | + | chr8_3:47799612-47799631 | Msa1292040:CDS | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | chr8_3:47799441-47799460 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | chr8_3:47799438-47799457 | Msa1292040:CDS | 55.0% | |
| GGAGGATTTCCTGGACTACC+TGG | + | chr8_3:47799645-47799664 | Msa1292040:CDS | 55.0% | |
| GGATTTCCTGGACTACCTGG+AGG | + | chr8_3:47799648-47799667 | Msa1292040:CDS | 55.0% | |
| GGAAATCCTCCAGGTAGTCC+AGG | - | chr8_3:47799657-47799676 | None:intergenic | 55.0% | |
| GTAGGATCTAGAGGACAGCC+TGG | + | chr8_3:47799582-47799601 | Msa1292040:CDS | 55.0% | |
| TCAGGCTGTCGAAATCCTCC+AGG | - | chr8_3:47799702-47799721 | None:intergenic | 55.0% | |
| GGAGGATTTCGACAGCCTGA+AGG | + | chr8_3:47799702-47799721 | Msa1292040:CDS | 55.0% | |
| CGACAGCCTGAAGGATTTCC+TGG | + | chr8_3:47799711-47799730 | Msa1292040:CDS | 55.0% | |
| GGCAGTCCAGGAAATCCTTC+AGG | - | chr8_3:47799720-47799739 | None:intergenic | 55.0% | |
| GAAGGATTTCCTGGACTGCC+TGG | + | chr8_3:47799720-47799739 | Msa1292040:CDS | 55.0% | |
| CCTACACCAGGAAATCCTCC+AGG | - | chr8_3:47799441-47799460 | None:intergenic | 55.0% | |
| CCTGGAGGATTTCCTGGTGT+AGG | + | chr8_3:47799438-47799457 | Msa1292040:CDS | 55.0% | |
| TACTGCCTGGTGTACCAACC+AGG | + | chr8_3:47799880-47799899 | Msa1292040:intron | 55.0% | |
| ! | CTTCACCTGGTTGGTACACC+AGG | - | chr8_3:47799888-47799907 | None:intergenic | 55.0% |
| CTGGTGTACCAACCAGGTGA+AGG | + | chr8_3:47799886-47799905 | Msa1292040:intron | 55.0% | |
| GTGTACCAACCAGGTGAAGG+AGG | + | chr8_3:47799889-47799908 | Msa1292040:intron | 55.0% | |
| CCAAACCTCCTTCACCTGGT+TGG | - | chr8_3:47799897-47799916 | None:intergenic | 55.0% | |
| CCAACCAGGTGAAGGAGGTT+TGG | + | chr8_3:47799894-47799913 | Msa1292040:intron | 55.0% | |
| TCACCCAAACCTCCTTCACC+TGG | - | chr8_3:47799901-47799920 | None:intergenic | 55.0% | |
| GGTGAAGGAGGTTTGGGTGA+TGG | + | chr8_3:47799901-47799920 | Msa1292040:intron | 55.0% | |
| ! | GAAGGAGGTTTGGGTGATGG+AGG | + | chr8_3:47799904-47799923 | Msa1292040:CDS | 55.0% |
| CCCTCCCAAGCACTAAACCT+AGG | + | chr8_3:47800576-47800595 | Msa1292040:intron | 55.0% | |
| GACGGCTATAAACCCGGAGG+TGG | + | chr8_3:47799342-47799361 | Msa1292040:CDS | 60.0% | |
| AACTGGAAGGCTCCCACCTC+CGG | - | chr8_3:47799358-47799377 | None:intergenic | 60.0% | |
| ! | GGTGGATTTCCTGGACTGCC+TGG | + | chr8_3:47799465-47799484 | Msa1292040:CDS | 60.0% |
| GGATTTCCTGGACTGCCTGG+AGG | + | chr8_3:47799468-47799487 | Msa1292040:CDS | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | chr8_3:47799477-47799496 | None:intergenic | 60.0% | |
| GGACTGCCTGGAGGATTTCC+TGG | + | chr8_3:47799477-47799496 | Msa1292040:CDS | 60.0% | |
| ! | GGTGGATTTCCTGGACTGCC+TGG | + | chr8_3:47799465-47799484 | Msa1292040:CDS | 60.0% |
| GGATTTCCTGGACTGCCTGG+AGG | + | chr8_3:47799468-47799487 | Msa1292040:CDS | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | chr8_3:47799477-47799496 | None:intergenic | 60.0% | |
| GGATCTAGAGGACAGCCTGG+AGG | + | chr8_3:47799585-47799604 | Msa1292040:CDS | 60.0% | |
| CCAGGCTGTTGAACTCCTCC+AGG | - | chr8_3:47799603-47799622 | None:intergenic | 60.0% | |
| CCTGGAGGAGTTCAACAGCC+TGG | + | chr8_3:47799600-47799619 | Msa1292040:CDS | 60.0% | |
| GGAGGAGTTCAACAGCCTGG+AGG | + | chr8_3:47799603-47799622 | Msa1292040:CDS | 60.0% | |
| GGATCTAGAGGACAGCCTGG+AGG | + | chr8_3:47799585-47799604 | Msa1292040:CDS | 60.0% | |
| GGATTTCCTGGACTGCCTGG+AGG | + | chr8_3:47799468-47799487 | Msa1292040:CDS | 60.0% | |
| GGAAATCCTCCAGGCAGTCC+AGG | - | chr8_3:47799477-47799496 | None:intergenic | 60.0% | |
| GGACTGCCTGGAGGATTTCC+TGG | + | chr8_3:47799477-47799496 | Msa1292040:CDS | 60.0% | |
| ! | GTGATGGAGGACTGCCGTGA+AGG | + | chr8_3:47799917-47799936 | Msa1292040:CDS | 60.0% |
| ATGGAGGACTGCCGTGAAGG+AGG | + | chr8_3:47799920-47799939 | Msa1292040:CDS | 60.0% | |
| ACTGGAAGGCTCCCACCTCC+GGG | - | chr8_3:47799357-47799376 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 47799129 | 47801799 | 47799129 | ID=Msa1292040;Name=Msa1292040 |
| chr8_3 | mRNA | 47799129 | 47801799 | 47799129 | ID=Msa1292040-mRNA-1;Parent=Msa1292040;Name=Msa1292040-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|0.66|1|1|3|0|388 |
| chr8_3 | exon | 47799129 | 47799878 | 47799129 | ID=Msa1292040-mRNA-1:exon:13290;Parent=Msa1292040-mRNA-1 |
| chr8_3 | exon | 47799902 | 47799983 | 47799902 | ID=Msa1292040-mRNA-1:exon:13291;Parent=Msa1292040-mRNA-1 |
| chr8_3 | exon | 47801465 | 47801799 | 47801465 | ID=Msa1292040-mRNA-1:exon:13292;Parent=Msa1292040-mRNA-1 |
| chr8_3 | CDS | 47799129 | 47799878 | 47799129 | ID=Msa1292040-mRNA-1:cds;Parent=Msa1292040-mRNA-1 |
| chr8_3 | CDS | 47799902 | 47799983 | 47799902 | ID=Msa1292040-mRNA-1:cds;Parent=Msa1292040-mRNA-1 |
| chr8_3 | CDS | 47801465 | 47801799 | 47801465 | ID=Msa1292040-mRNA-1:cds;Parent=Msa1292040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
