Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443960 | sp|Q8RY22|DEGP7_ARATH | 66.844 | 1125 | 282 | 12 | 1 | 1062 | 1 | 1097 | 0.0 | 1433 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443960 | A0A072UXY7 | 90.417 | 1127 | 31 | 4 | 1 | 1066 | 1 | 1111 | 0.0 | 2058 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1377310 | Msa1443960 | 0.972452 | 8.662199e-135 | -8.615850e-47 |
Msa0719950 | Msa1443960 | 0.825640 | 4.199477e-54 | -8.615850e-47 |
Msa0368340 | Msa1443960 | 0.992094 | 2.847680e-191 | -8.615850e-47 |
Msa0461990 | Msa1443960 | 0.996766 | 6.350091e-232 | -8.615850e-47 |
Msa0481950 | Msa1443960 | 0.914833 | 1.204505e-84 | -8.615850e-47 |
Msa0483340 | Msa1443960 | 0.993907 | 4.179421e-203 | -8.615850e-47 |
Msa0507430 | Msa1443960 | 0.808221 | 3.444861e-50 | -8.615850e-47 |
Msa0860750 | Msa1443960 | 0.834744 | 2.510580e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443960 | MtrunA17_Chr3g0111461 | 90.417 | 1127 | 31 | 4 | 1 | 1066 | 1 | 1111 | 0.0 | 2058 |
Msa1443960 | MtrunA17_Chr3g0111471 | 76.903 | 1130 | 174 | 11 | 1 | 1066 | 1 | 1107 | 0.0 | 1667 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443960 | AT3G03380.1 | 66.844 | 1125 | 282 | 12 | 1 | 1062 | 1 | 1097 | 0.0 | 1433 |
Msa1443960 | AT3G03380.2 | 66.044 | 1125 | 258 | 11 | 1 | 1062 | 1 | 1064 | 0.0 | 1424 |
Find 309 sgRNAs with CRISPR-Local
Find 1223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTGCAGGTACATGATTT+TGG | 0.110519 | tig0030624:+9579 | Msa1443960:intron |
CGCAAAACCTGTCGCCTTAT+TGG | 0.141830 | tig0030624:-22558 | Msa1443960:intergenic |
ACTAACTTGTAAGAAATAAT+TGG | 0.166372 | tig0030624:-13742 | Msa1443960:intergenic |
ATCAAAGAGTTTAACTCTTT+TGG | 0.214898 | tig0030624:+12973 | Msa1443960:CDS |
TGAAGCAAGATTTACATTAT+TGG | 0.215192 | tig0030624:+24902 | Msa1443960:CDS |
GGAAATTGATCCACCGTTTC+AGG | 0.227919 | tig0030624:+7819 | Msa1443960:CDS |
AAGGAAGGGTCCAAGCTTTA+TGG | 0.235947 | tig0030624:+18862 | Msa1443960:CDS |
CTTTCAAAGGCTCGCAGTTT+TGG | 0.236510 | tig0030624:+20814 | Msa1443960:CDS |
TTACTGCCAGGTTTCAATTT+TGG | 0.247111 | tig0030624:+10251 | Msa1443960:intron |
ATTAAGTGATGTTTGGATTC+AGG | 0.252836 | tig0030624:+20837 | Msa1443960:CDS |
TTGTCTTGCTCCCGGCATTC+AGG | 0.255148 | tig0030624:-10911 | Msa1443960:intergenic |
TTAATCCAGACACTGGAATT+TGG | 0.255950 | tig0030624:+24944 | Msa1443960:CDS |
GATTCCCCTTATTTATCATC+TGG | 0.256203 | tig0030624:+17043 | Msa1443960:CDS |
GAGTCTCGTCAAACCCTTTA+TGG | 0.262867 | tig0030624:-11807 | Msa1443960:intergenic |
CAAGTATAGTCTCCAGTTTC+AGG | 0.265110 | tig0030624:-12901 | Msa1443960:intergenic |
CAGTGGATAGTTGAAATTAA+TGG | 0.273425 | tig0030624:+24345 | Msa1443960:CDS |
CTGCCCTGCCAATCTATAAC+TGG | 0.276149 | tig0030624:-10879 | Msa1443960:intergenic |
GCTTCTCCTGCCAGTGAAAC+TGG | 0.277699 | tig0030624:+11976 | Msa1443960:CDS |
ACCCGGTTCTAAATGTTTAT+AGG | 0.288386 | tig0030624:-12123 | Msa1443960:intergenic |
AATATATCACACTCAAGATT+TGG | 0.288823 | tig0030624:+17656 | Msa1443960:CDS |
GCACAACTCGTACAATTAAT+TGG | 0.289573 | tig0030624:+22915 | Msa1443960:CDS |
CCTTGCGCTGCTTTAAATAT+AGG | 0.294907 | tig0030624:+18640 | Msa1443960:CDS |
GTGAAACTTATGTTGATAAA+TGG | 0.296158 | tig0030624:+11130 | Msa1443960:CDS |
CCTCCATCTTGTATGCTTGA+TGG | 0.296492 | tig0030624:+17597 | Msa1443960:CDS |
GGGACACCTCTTCTCATAAA+TGG | 0.298945 | tig0030624:+20733 | Msa1443960:CDS |
TTATACCCAGATGATAAATA+AGG | 0.303473 | tig0030624:-17049 | Msa1443960:intergenic |
GTGTTGAAGTTGATTGCTTC+TGG | 0.313792 | tig0030624:+18330 | Msa1443960:CDS |
ACCTGGCTTATTGCATAAAT+AGG | 0.315397 | tig0030624:-20682 | Msa1443960:intergenic |
CGTGCTGCAGAGTTACTTCC+AGG | 0.315859 | tig0030624:+17956 | Msa1443960:CDS |
TTCAGGTTGTGAGGGCATTA+AGG | 0.316252 | tig0030624:+11091 | Msa1443960:intron |
AATCCAACACTAGCAGCTTC+AGG | 0.320166 | tig0030624:-9663 | Msa1443960:intergenic |
TGTCGTCCCGAGTGTAAATC+TGG | 0.327044 | tig0030624:-16982 | Msa1443960:intergenic |
GCTTTCCCAGTTGAAATTCC+TGG | 0.327424 | tig0030624:+17744 | Msa1443960:CDS |
TTATGCAATAAGCCAGGTTC+TGG | 0.328632 | tig0030624:+20687 | Msa1443960:CDS |
AATCTGGATCTGCGTCTTCC+AGG | 0.331141 | tig0030624:+25070 | Msa1443960:three_prime_UTR |
TTTGATTTACAGGCAGCATC+TGG | 0.333651 | tig0030624:+10831 | Msa1443960:intron |
ACCTCTCCAGGAATTTCAAC+TGG | 0.334389 | tig0030624:-17750 | Msa1443960:intergenic |
TTGGTGTGGTTGTATAGTTC+AGG | 0.335309 | tig0030624:+22934 | Msa1443960:CDS |
GGAGATTCTGTTTATCTTGT+GGG | 0.336464 | tig0030624:+18568 | Msa1443960:CDS |
TATACCTCGTGGTACTCTTC+AGG | 0.338845 | tig0030624:+11164 | Msa1443960:CDS |
TCTTCCATTGAATGAGATTA+GGG | 0.349263 | tig0030624:-7727 | Msa1443960:intergenic |
AATTATTTCTTACAAGTTAG+TGG | 0.350593 | tig0030624:+13744 | Msa1443960:CDS |
AGTTATAAAGCAATCGATTC+AGG | 0.354093 | tig0030624:+25228 | Msa1443960:three_prime_UTR |
GCAAAACCTGTCGCCTTATT+GGG | 0.360483 | tig0030624:-22557 | Msa1443960:intergenic |
GGCATTAAGGTTTCTTCAAA+AGG | 0.361475 | tig0030624:+11104 | Msa1443960:CDS |
GTACTCTTGCTCGTTTAGAT+AGG | 0.368057 | tig0030624:+10277 | Msa1443960:CDS |
ATCATATGATCCATCTGCTT+TGG | 0.368564 | tig0030624:+17910 | Msa1443960:CDS |
GCAATAATTAAGAAATTTGC+TGG | 0.369760 | tig0030624:+15036 | Msa1443960:CDS |
CTTTGATTTGTTTAGGTGCC+AGG | 0.373312 | tig0030624:+12092 | Msa1443960:intron |
ATATTCACAAGCCAAATAAA+AGG | 0.375526 | tig0030624:-25403 | Msa1443960:intergenic |
TTCTTGTGGGAACAGATGTT+AGG | 0.376049 | tig0030624:+22882 | Msa1443960:CDS |
AAAGCGTTGCAGACACGATT+TGG | 0.377897 | tig0030624:+25113 | Msa1443960:three_prime_UTR |
ATATATCACACTCAAGATTT+GGG | 0.378310 | tig0030624:+17657 | Msa1443960:CDS |
TTAACAAAAGAATCTATATC+TGG | 0.378431 | tig0030624:-24378 | Msa1443960:intergenic |
CGATGCCAAATTCCAGTGTC+TGG | 0.379071 | tig0030624:-24949 | Msa1443960:intergenic |
GGACCCACTTGATCCTCCTT+TGG | 0.379627 | tig0030624:-10856 | Msa1443960:intergenic |
CATTACTCAATTCCTGAAAC+TGG | 0.386382 | tig0030624:+12889 | Msa1443960:CDS |
TATACCCAGATGATAAATAA+GGG | 0.389932 | tig0030624:-17048 | Msa1443960:intergenic |
GAAGTTATTGAGCTTGATAC+TGG | 0.392056 | tig0030624:+18700 | Msa1443960:CDS |
CATTCAGCGGTACGAGCTCT+TGG | 0.395312 | tig0030624:+22962 | Msa1443960:CDS |
TAAGAAAGATTTACCTCTCC+AGG | 0.395372 | tig0030624:-17762 | Msa1443960:intergenic |
ACAGTGAAATCGGAAGTTTC+TGG | 0.396526 | tig0030624:-14580 | Msa1443960:intergenic |
AATATTGCTAACCTGCTGAT+AGG | 0.398598 | tig0030624:-13787 | Msa1443960:intergenic |
ACTTCTAATATTCTCAGAAA+TGG | 0.398619 | tig0030624:-20772 | Msa1443960:intergenic |
TCATATGATCCATCTGCTTT+GGG | 0.398966 | tig0030624:+17911 | Msa1443960:CDS |
CAAAGGAACAAACACAAATC+TGG | 0.399736 | tig0030624:+25054 | Msa1443960:three_prime_UTR |
AGGGCAGTTGGCCTGAATGC+CGG | 0.401499 | tig0030624:+10900 | Msa1443960:CDS |
ATCTTCCATTGAATGAGATT+AGG | 0.403986 | tig0030624:-7728 | Msa1443960:intergenic |
CTTACCAGATGATGGGTTAA+TGG | 0.405008 | tig0030624:+17342 | Msa1443960:CDS |
TTGTCAAGAAAGACCCAATA+AGG | 0.405263 | tig0030624:+22544 | Msa1443960:CDS |
GATGATAAATAAGGGGAATC+AGG | 0.405976 | tig0030624:-17040 | Msa1443960:intergenic |
TAAGGACAGTTCACCTCAAC+GGG | 0.406095 | tig0030624:+24860 | Msa1443960:CDS |
GGATTAGAAATCAGAGTTGT+TGG | 0.408848 | tig0030624:+9681 | Msa1443960:CDS |
AAACAAGACCACAGTGAAAT+CGG | 0.410128 | tig0030624:-14590 | Msa1443960:intergenic |
TAGAGCATGGAGAATTTGTT+CGG | 0.410379 | tig0030624:+24836 | Msa1443960:CDS |
AGCCTATAAACATTTAGAAC+CGG | 0.413448 | tig0030624:+12121 | Msa1443960:CDS |
ATTTACATTATTGGCCTACA+TGG | 0.417060 | tig0030624:+24911 | Msa1443960:CDS |
GGTTTCCTCGGGTTCATTCA+AGG | 0.417899 | tig0030624:-17299 | Msa1443960:intergenic |
GGGGAGGTGCATACCATTCA+TGG | 0.419296 | tig0030624:-16961 | Msa1443960:intergenic |
GTCTACTCTTGTGATGTTTG+AGG | 0.422231 | tig0030624:+17423 | Msa1443960:CDS |
CTTGTTTATGTGACAGAACC+AGG | 0.423140 | tig0030624:+14606 | Msa1443960:CDS |
CAGTTATAGATTGGCAGGGC+AGG | 0.424567 | tig0030624:+10880 | Msa1443960:CDS |
AAGATCATATCTGGTGCAAA+TGG | 0.425516 | tig0030624:+20712 | Msa1443960:CDS |
GGGCAGTTGGCCTGAATGCC+GGG | 0.425575 | tig0030624:+10901 | Msa1443960:CDS |
AGGAAGGGTCCAAGCTTTAT+GGG | 0.425827 | tig0030624:+18863 | Msa1443960:CDS |
ACGTTACAGAGCGACCAATA+TGG | 0.425968 | tig0030624:+18678 | Msa1443960:CDS |
GTTCTGGACAAGATCATATC+TGG | 0.426731 | tig0030624:+20703 | Msa1443960:CDS |
CTTACTGGATCTCTATATAT+CGG | 0.430813 | tig0030624:-8178 | Msa1443960:intergenic |
AAGCTCAATAACTTCCATAT+TGG | 0.431622 | tig0030624:-18692 | Msa1443960:intergenic |
GATGTCCTTGTCCGCGTCAA+TGG | 0.432632 | tig0030624:+12146 | Msa1443960:CDS |
TCGCCAGTCTTCGGCAGTTA+CGG | 0.434795 | tig0030624:-7848 | Msa1443960:intergenic |
CTAACTTGTAAGAAATAATT+GGG | 0.437535 | tig0030624:-13741 | Msa1443960:intergenic |
TATACACCATGACCCTCTTC+AGG | 0.438139 | tig0030624:-22992 | Msa1443960:intergenic |
ATTCCCCTTATTTATCATCT+GGG | 0.441332 | tig0030624:+17044 | Msa1443960:CDS |
TGAATGAGCAGAGTATAGTA+TGG | 0.446183 | tig0030624:+25006 | Msa1443960:exon |
TATTGAATTACAAATTGAAA+GGG | 0.447762 | tig0030624:+12943 | Msa1443960:CDS |
GTCCCCAGTTATAGATTGGC+AGG | 0.449405 | tig0030624:+10875 | Msa1443960:CDS |
CCATCTGCTTTGGGACCTGT+TGG | 0.452644 | tig0030624:+17920 | Msa1443960:CDS |
TGCAACATTATTTAACCCAT+TGG | 0.456329 | tig0030624:+25276 | Msa1443960:three_prime_UTR |
GTATAAAGATGTTGGAAGTC+TGG | 0.456649 | tig0030624:+17066 | Msa1443960:CDS |
GTACCACGAGGTATAGAAAC+TGG | 0.457062 | tig0030624:-11156 | Msa1443960:intergenic |
CAGTTATTTCTAAGCTATCA+AGG | 0.458352 | tig0030624:+15091 | Msa1443960:CDS |
TGAAATTTCAAAGTATCAAA+GGG | 0.467345 | tig0030624:-25436 | Msa1443960:intergenic |
ACGCCGTAACTGCCGAAGAC+TGG | 0.470258 | tig0030624:+7845 | Msa1443960:CDS |
ACGAGAGCATAATTGTGAAC+AGG | 0.472971 | tig0030624:-17887 | Msa1443960:intergenic |
ATGAAATTTCAAAGTATCAA+AGG | 0.474327 | tig0030624:-25437 | Msa1443960:intergenic |
ATGGGGAAGCTTCTCTACTC+AGG | 0.475203 | tig0030624:+18881 | Msa1443960:CDS |
AGGAGATTCTGTTTATCTTG+TGG | 0.476173 | tig0030624:+18567 | Msa1443960:CDS |
TAAACCCTAATCTCATTCAA+TGG | 0.477556 | tig0030624:+7723 | Msa1443960:exon |
GTTGATGATTTATCAGCTGA+TGG | 0.478944 | tig0030624:+17259 | Msa1443960:CDS |
TTCTCATAAATGGTGTCAAA+AGG | 0.479435 | tig0030624:+20743 | Msa1443960:CDS |
ATCCAACACTAGCAGCTTCA+GGG | 0.479736 | tig0030624:-9662 | Msa1443960:intergenic |
AACAAGCATTCCAGTTTCAC+TGG | 0.481103 | tig0030624:-11986 | Msa1443960:intergenic |
TTATCCAACATTACTTTCAA+AGG | 0.481576 | tig0030624:+20801 | Msa1443960:CDS |
TACTCTTGCTCGTTTAGATA+GGG | 0.483042 | tig0030624:+10278 | Msa1443960:CDS |
AGAGCATGGAGAATTTGTTC+GGG | 0.483059 | tig0030624:+24837 | Msa1443960:CDS |
ATGGAGAATTTGTTCGGGTA+AGG | 0.483956 | tig0030624:+24842 | Msa1443960:CDS |
TGTTTATAGGCTGGACCACC+TGG | 0.485802 | tig0030624:-12110 | Msa1443960:intergenic |
GCCCCTGAAGCTGCTAGTGT+TGG | 0.487171 | tig0030624:+9660 | Msa1443960:CDS |
GCATTAAGGTTTCTTCAAAA+GGG | 0.488199 | tig0030624:+11105 | Msa1443960:CDS |
TGCACTTGTTGTCTTGCTCC+CGG | 0.488223 | tig0030624:-10919 | Msa1443960:intergenic |
GAAGATCCATCGGAGCGGTT+AGG | 0.488908 | tig0030624:+7745 | Msa1443960:CDS |
AACATAGCTTCAGCAACAAC+AGG | 0.489164 | tig0030624:-8127 | Msa1443960:intergenic |
ATTGGCCTACATGGGAATTG+AGG | 0.489182 | tig0030624:+24920 | Msa1443960:CDS |
AGTAGCGGAGCTAGCGGAAG+CGG | 0.489426 | tig0030624:-7944 | Msa1443960:intergenic |
TAGTCCATTAACCCATCATC+TGG | 0.489512 | tig0030624:-17346 | Msa1443960:intergenic |
GGTTCTAAATGTTTATAGGC+TGG | 0.489615 | tig0030624:-12119 | Msa1443960:intergenic |
GAATCTCCTCGACGTAATGC+CGG | 0.489720 | tig0030624:-18553 | Msa1443960:intergenic |
ATTTCCTAGAGGTTGCTTGA+AGG | 0.491093 | tig0030624:-18603 | Msa1443960:intergenic |
CGAGCCTTTGAAAGTAATGT+TGG | 0.492042 | tig0030624:-20805 | Msa1443960:intergenic |
AAAGAATCTATATCTGGAGT+TGG | 0.495811 | tig0030624:-24372 | Msa1443960:intergenic |
TGCTTCAATGTTAAGACTCG+TGG | 0.495889 | tig0030624:-24886 | Msa1443960:intergenic |
TCATCTGGGTATAAAGATGT+TGG | 0.495936 | tig0030624:+17058 | Msa1443960:CDS |
CGAGAGGTTGAACTTCTTGT+GGG | 0.496686 | tig0030624:+22869 | Msa1443960:CDS |
TCAGGTGCCTTACCAGATGA+TGG | 0.498142 | tig0030624:+17334 | Msa1443960:CDS |
ATACGAAGAACGACGACAGC+AGG | 0.498546 | tig0030624:-7892 | Msa1443960:intergenic |
CCAACCTCTTTCCTATCAGC+AGG | 0.498782 | tig0030624:+13776 | Msa1443960:CDS |
TCCTATTTATGCAATAAGCC+AGG | 0.500296 | tig0030624:+20681 | Msa1443960:CDS |
AACGGGTGAAGTGTTTATGC+AGG | 0.501577 | tig0030624:-7596 | Msa1443960:intergenic |
AGCATTCCAGTTTCACTGGC+AGG | 0.501597 | tig0030624:-11982 | Msa1443960:intergenic |
CTTGGATTTCTTCCTGAAGA+GGG | 0.502719 | tig0030624:+22980 | Msa1443960:CDS |
ATATGATATAATTAACCAAT+GGG | 0.502747 | tig0030624:-25291 | Msa1443960:intergenic |
GGGGAATCAGGCTGAAAAGC+AGG | 0.502798 | tig0030624:-17028 | Msa1443960:intergenic |
GGGAGTCCTGTACATAGATA+TGG | 0.505764 | tig0030624:+24309 | Msa1443960:CDS |
TCTTGGATTTCTTCCTGAAG+AGG | 0.506242 | tig0030624:+22979 | Msa1443960:CDS |
GCTTCCGCTAGCTCCGCTAC+TGG | 0.507281 | tig0030624:+7946 | Msa1443960:CDS |
AAGGGGTGCACGAGTACCAT+TGG | 0.507706 | tig0030624:+15110 | Msa1443960:CDS |
TCTTGTGGGAACAGATGTTA+GGG | 0.508227 | tig0030624:+22883 | Msa1443960:CDS |
AATCGCCATGTTGTTAAGCC+TGG | 0.508229 | tig0030624:+8006 | Msa1443960:CDS |
TATTGGTCGCTCTGTAACGT+GGG | 0.509557 | tig0030624:-18675 | Msa1443960:intergenic |
CAATTCACAGGTGGTGTCAT+GGG | 0.510151 | tig0030624:+24289 | Msa1443960:intron |
ATATTGAATTACAAATTGAA+AGG | 0.510770 | tig0030624:+12942 | Msa1443960:CDS |
TACACTCGGGACGACAGTAC+TGG | 0.513948 | tig0030624:+16989 | Msa1443960:CDS |
CCAATTCACAGGTGGTGTCA+TGG | 0.514670 | tig0030624:+24288 | Msa1443960:intron |
GTGGGTCCCCAGTTATAGAT+TGG | 0.515056 | tig0030624:+10871 | Msa1443960:CDS |
GGGACGACAGTACTGGCCTC+TGG | 0.515130 | tig0030624:+16996 | Msa1443960:CDS |
TGTTCACCAGTCAAAGAACT+TGG | 0.515909 | tig0030624:-17097 | Msa1443960:intergenic |
GATTGGCAGGGCAGGGCAGT+TGG | 0.516452 | tig0030624:+10888 | Msa1443960:CDS |
ACGAGAGGTTGAACTTCTTG+TGG | 0.517421 | tig0030624:+22868 | Msa1443960:CDS |
AACTTGTCATGTGTCAATCA+TGG | 0.518518 | tig0030624:-25209 | Msa1443960:intergenic |
TTTGACGAGACTCGCCGGCT+TGG | 0.519580 | tig0030624:+11817 | Msa1443960:CDS |
AGAAGCTTCCCCATAAAGCT+TGG | 0.519920 | tig0030624:-18872 | Msa1443960:intergenic |
TTGGCATCGTAATGTAATCA+AGG | 0.520326 | tig0030624:+24963 | Msa1443960:CDS |
ATTTAAAGCAGCGCAAGGAT+TGG | 0.520476 | tig0030624:-18635 | Msa1443960:intergenic |
CCCAGTTGAAATTCCTGGAG+AGG | 0.522398 | tig0030624:+17749 | Msa1443960:CDS |
TTGACACCATTTATGAGAAG+AGG | 0.522991 | tig0030624:-20739 | Msa1443960:intergenic |
CAAATTTCTTAATTATTGCA+TGG | 0.526668 | tig0030624:-15032 | Msa1443960:intergenic |
TTGATGGCTGCAGTCGGTGT+TGG | 0.526740 | tig0030624:+16925 | Msa1443960:intron |
ACAGATGTTAGGGATGGAAA+TGG | 0.527100 | tig0030624:+22893 | Msa1443960:CDS |
GAAGTGTGTGTTGTCAACTA+TGG | 0.529942 | tig0030624:-7654 | Msa1443960:intergenic |
TCTCACGACAATGGATCTGA+TGG | 0.530429 | tig0030624:+17217 | Msa1443960:CDS |
CCTCTCCAGGAATTTCAACT+GGG | 0.531113 | tig0030624:-17749 | Msa1443960:intergenic |
AGATCATATCTGGTGCAAAT+GGG | 0.532000 | tig0030624:+20713 | Msa1443960:CDS |
TCCGCTCCTAACCGCTCCGA+TGG | 0.532349 | tig0030624:-7751 | Msa1443960:intergenic |
AGTTATTTCTAAGCTATCAA+GGG | 0.534850 | tig0030624:+15092 | Msa1443960:CDS |
CGAACGACTGAAGCACCAAC+AGG | 0.535120 | tig0030624:-17935 | Msa1443960:intergenic |
ATCATGGCAATGCTCAATCA+TGG | 0.535756 | tig0030624:-25193 | Msa1443960:intergenic |
GACTGGTGAACATGCTCGTG+GGG | 0.536217 | tig0030624:+17108 | Msa1443960:CDS |
TCTCTATATATCGGATGCAC+TGG | 0.538307 | tig0030624:-8169 | Msa1443960:intergenic |
TGTGTGTGAAGGTAACCATC+AGG | 0.538947 | tig0030624:+17135 | Msa1443960:CDS |
TGCCCTGCCAATCTATAACT+GGG | 0.539312 | tig0030624:-10878 | Msa1443960:intergenic |
AAGGGTTTGACGAGACTCGC+CGG | 0.539321 | tig0030624:+11812 | Msa1443960:CDS |
TACAGACCATATCTATGTAC+AGG | 0.540265 | tig0030624:-24315 | Msa1443960:intergenic |
CGACAGCAGGAACGACTTTG+CGG | 0.540830 | tig0030624:-7879 | Msa1443960:intergenic |
AGACTCGTGGCTTCCCGTTG+AGG | 0.541171 | tig0030624:-24873 | Msa1443960:intergenic |
TTTCTTCCTGAAGAGGGTCA+TGG | 0.542233 | tig0030624:+22986 | Msa1443960:CDS |
CATTAACCCATCATCTGGTA+AGG | 0.544338 | tig0030624:-17341 | Msa1443960:intergenic |
ATATGATCTTGTCCAGAACC+TGG | 0.546858 | tig0030624:-20699 | Msa1443960:intergenic |
AGTTATAGATTGGCAGGGCA+GGG | 0.546894 | tig0030624:+10881 | Msa1443960:CDS |
GAAGCCTTCAAGCAACCTCT+AGG | 0.547159 | tig0030624:+18599 | Msa1443960:CDS |
GTCGTCCCGAGTGTAAATCT+GGG | 0.547554 | tig0030624:-16981 | Msa1443960:intergenic |
CACCTCCCCAGATTTACACT+CGG | 0.550369 | tig0030624:+16975 | Msa1443960:CDS |
AGTCGTCCAAGTTCTTTGAC+TGG | 0.550800 | tig0030624:+17091 | Msa1443960:CDS |
TCGTGAGATACACACTCTAA+AGG | 0.551548 | tig0030624:-17202 | Msa1443960:intergenic |
AGATATATGCTCTTTAAAGC+AGG | 0.551939 | tig0030624:+15000 | Msa1443960:intron |
CCTCAGAAGTGAGACAGAGC+AGG | 0.552016 | tig0030624:+11840 | Msa1443960:CDS |
GAAAGACCCAATAAGGCGAC+AGG | 0.555127 | tig0030624:+22551 | Msa1443960:CDS |
TTCTTAATTATTGCATGGCG+AGG | 0.557029 | tig0030624:-15027 | Msa1443960:intergenic |
TTGACTGGTGAACATGCTCG+TGG | 0.557432 | tig0030624:+17106 | Msa1443960:CDS |
CTGTTCCAGCTTAAATTCAG+TGG | 0.558079 | tig0030624:+20622 | Msa1443960:intron |
TATATGATATAATTAACCAA+TGG | 0.558697 | tig0030624:-25292 | Msa1443960:intergenic |
ATCTAAACGAGCAAGAGTAC+CGG | 0.558820 | tig0030624:-10274 | Msa1443960:intergenic |
TTGAGGTTTAATCCAGACAC+TGG | 0.562805 | tig0030624:+24937 | Msa1443960:CDS |
CTTCACCATTGACGCGGACA+AGG | 0.562871 | tig0030624:-12151 | Msa1443960:intergenic |
AATTTCCATGGATAAGTCGT+CGG | 0.563097 | tig0030624:-7803 | Msa1443960:intergenic |
ACAACATACTTCTTATAGTG+AGG | 0.563470 | tig0030624:-10306 | Msa1443960:intergenic |
CTGATGGGATAGTCAAGAAA+CGG | 0.564999 | tig0030624:+17233 | Msa1443960:CDS |
AACCATCAGGAGTTGGCTGA+TGG | 0.567235 | tig0030624:+17148 | Msa1443960:CDS |
CCAACAGGTCCCAAAGCAGA+TGG | 0.568297 | tig0030624:-17920 | Msa1443960:intergenic |
CTAACCTGCTGATAGGAAAG+AGG | 0.568607 | tig0030624:-13780 | Msa1443960:intergenic |
TTGATTTACAGGCAGCATCT+GGG | 0.572001 | tig0030624:+10832 | Msa1443960:intron |
ATTGAATTACAAATTGAAAG+GGG | 0.572224 | tig0030624:+12944 | Msa1443960:CDS |
AGTCAAAGAACTTGGACGAC+TGG | 0.574850 | tig0030624:-17089 | Msa1443960:intergenic |
TTTACATTATTGGCCTACAT+GGG | 0.577146 | tig0030624:+24912 | Msa1443960:CDS |
CCTGCTGATAGGAAAGAGGT+TGG | 0.578359 | tig0030624:-13776 | Msa1443960:intergenic |
CACCATCAGCCAACTCCTGA+TGG | 0.579029 | tig0030624:-17150 | Msa1443960:intergenic |
TGACTGGTGAACATGCTCGT+GGG | 0.581266 | tig0030624:+17107 | Msa1443960:CDS |
TTTAGAAATTGTATAGCACT+AGG | 0.581734 | tig0030624:-9618 | Msa1443960:intergenic |
GGCTGATGGTGTCGCTAGCA+TGG | 0.582214 | tig0030624:+17162 | Msa1443960:CDS |
TCATAATTGAAACACACGAA+TGG | 0.582698 | tig0030624:+7523 | Msa1443960:five_prime_UTR |
GAAAACCGACGACTTATCCA+TGG | 0.582980 | tig0030624:+7798 | Msa1443960:CDS |
CATTAAGGTTTCTTCAAAAG+GGG | 0.583184 | tig0030624:+11106 | Msa1443960:CDS |
CCTATATTTAAAGCAGCGCA+AGG | 0.583319 | tig0030624:-18640 | Msa1443960:intergenic |
AAACGGTGGATCAATTTCCA+TGG | 0.583469 | tig0030624:-7815 | Msa1443960:intergenic |
GATGGGTTAATGGACTATCA+AGG | 0.585317 | tig0030624:+17352 | Msa1443960:CDS |
ATATTGGTCGCTCTGTAACG+TGG | 0.586478 | tig0030624:-18676 | Msa1443960:intergenic |
AATATTCTCAGAAATGGCAT+AGG | 0.587167 | tig0030624:-20766 | Msa1443960:intergenic |
TGCTAACAGATGAACAAGGA+AGG | 0.588657 | tig0030624:+18847 | Msa1443960:CDS |
TTAAACCTCAATTCCCATGT+AGG | 0.589505 | tig0030624:-24925 | Msa1443960:intergenic |
TCTCACTTCTGAGGCCAAGC+CGG | 0.590055 | tig0030624:-11831 | Msa1443960:intergenic |
TCATTCAATGGAAGATCCAT+CGG | 0.590583 | tig0030624:+7735 | Msa1443960:exon |
CCTTTGCTACTGCATACGTA+GGG | 0.590751 | tig0030624:-25037 | Msa1443960:intergenic |
AGAGTTGTTGGAAATGATAG+TGG | 0.591242 | tig0030624:+9693 | Msa1443960:CDS |
CAGGCAGCATCTGGGACCAA+AGG | 0.592331 | tig0030624:+10840 | Msa1443960:intron |
GGGACCAAAGGAGGATCAAG+TGG | 0.593956 | tig0030624:+10852 | Msa1443960:CDS |
AGAGCTCGTACCGCTGAATG+TGG | 0.595646 | tig0030624:-22959 | Msa1443960:intergenic |
CAGGTGCCTTACCAGATGAT+GGG | 0.597439 | tig0030624:+17335 | Msa1443960:CDS |
ATTGGAGTATATAAGCTATG+TGG | 0.598011 | tig0030624:+15128 | Msa1443960:CDS |
CTAGCAGCTTCAGGGGCAAG+AGG | 0.601641 | tig0030624:-9654 | Msa1443960:intergenic |
ACTCGTACAATTAATTGGTG+TGG | 0.601695 | tig0030624:+22920 | Msa1443960:CDS |
TGACAGTTGATCGCCATGAA+TGG | 0.603508 | tig0030624:+16948 | Msa1443960:CDS |
GCCTATAAACATTTAGAACC+GGG | 0.604979 | tig0030624:+12122 | Msa1443960:CDS |
CAGAAGATCATCAATTCGTG+AGG | 0.607507 | tig0030624:+20653 | Msa1443960:CDS |
GTAAGGACAGTTCACCTCAA+CGG | 0.607880 | tig0030624:+24859 | Msa1443960:CDS |
GTTATTTCTAAGCTATCAAG+GGG | 0.612565 | tig0030624:+15093 | Msa1443960:CDS |
CAAGAGCTCACCCTTTCCAA+AGG | 0.613833 | tig0030624:-10957 | Msa1443960:intergenic |
TAACTGATATTAGTTCCTCA+AGG | 0.615980 | tig0030624:-15074 | Msa1443960:intergenic |
ATAAAGCAATCGATTCAGGC+TGG | 0.618393 | tig0030624:+25232 | Msa1443960:three_prime_UTR |
AAAAGATAGCAACACATCAG+AGG | 0.620185 | tig0030624:-17718 | Msa1443960:intergenic |
TCCTTTGCTACTGCATACGT+AGG | 0.620314 | tig0030624:-25038 | Msa1443960:intergenic |
AGTGACTGATGCATTTGCTG+TGG | 0.620386 | tig0030624:-17386 | Msa1443960:intergenic |
GCAGCATCTGGGACCAAAGG+AGG | 0.620601 | tig0030624:+10843 | Msa1443960:CDS |
GAATTACAAATTGAAAGGGG+TGG | 0.622224 | tig0030624:+12947 | Msa1443960:CDS |
TGTGGATCGTCATCGAAGGA+AGG | 0.622458 | tig0030624:+15146 | Msa1443960:CDS |
CTCACGACAATGGATCTGAT+GGG | 0.623764 | tig0030624:+17218 | Msa1443960:CDS |
ACATAGCTTATATACTCCAA+TGG | 0.625265 | tig0030624:-15126 | Msa1443960:intergenic |
ACACCATCAAGCATACAAGA+TGG | 0.625568 | tig0030624:-17600 | Msa1443960:intergenic |
GAGTGTGTATCTCACGACAA+TGG | 0.625621 | tig0030624:+17208 | Msa1443960:CDS |
TCCATCGGAGCGGTTAGGAG+CGG | 0.625998 | tig0030624:+7750 | Msa1443960:CDS |
AGAAGATCATCAATTCGTGA+GGG | 0.627156 | tig0030624:+20654 | Msa1443960:CDS |
TGTTGGCAGGAACTAGAGCA+TGG | 0.627193 | tig0030624:+24823 | Msa1443960:intron |
CCTGCTCTGTCTCACTTCTG+AGG | 0.628127 | tig0030624:-11840 | Msa1443960:intergenic |
TCCAACACTAGCAGCTTCAG+GGG | 0.629636 | tig0030624:-9661 | Msa1443960:intergenic |
TGATTTGTTTAGGTGCCAGG+TGG | 0.631499 | tig0030624:+12095 | Msa1443960:intron |
TGAAGGTAACCATCAGGAGT+TGG | 0.632098 | tig0030624:+17141 | Msa1443960:CDS |
AAGATCATCAATTCGTGAGG+GGG | 0.632531 | tig0030624:+20656 | Msa1443960:CDS |
AACTTACTTCACCATTGACG+CGG | 0.632906 | tig0030624:-12157 | Msa1443960:intergenic |
GTGGGAACAGATGTTAGGGA+TGG | 0.634758 | tig0030624:+22887 | Msa1443960:CDS |
ACCTCCCCAGATTTACACTC+GGG | 0.636427 | tig0030624:+16976 | Msa1443960:CDS |
TCGGAGCGGTTAGGAGCGGA+CGG | 0.637278 | tig0030624:+7754 | Msa1443960:CDS |
TGAAACTGGAATGCTTGTTG+TGG | 0.638801 | tig0030624:+11990 | Msa1443960:CDS |
TCCCGAGTGTAAATCTGGGG+AGG | 0.639469 | tig0030624:-16977 | Msa1443960:intergenic |
ATGGTCTGTATGCTCTTCAG+TGG | 0.643705 | tig0030624:+24328 | Msa1443960:CDS |
GCTATGTGGATCGTCATCGA+AGG | 0.645072 | tig0030624:+15142 | Msa1443960:CDS |
CCCTACGTATGCAGTAGCAA+AGG | 0.645363 | tig0030624:+25037 | Msa1443960:three_prime_UTR |
TGGAAATGATAGTGGTGAGA+AGG | 0.645560 | tig0030624:+9701 | Msa1443960:CDS |
GCTTACCAGGCTTAACAACA+TGG | 0.646259 | tig0030624:-8011 | Msa1443960:intergenic |
TCCCCAGTTATAGATTGGCA+GGG | 0.646955 | tig0030624:+10876 | Msa1443960:CDS |
ATACCCAGATGATAAATAAG+GGG | 0.647293 | tig0030624:-17047 | Msa1443960:intergenic |
GGAAGGGTCCAAGCTTTATG+GGG | 0.647869 | tig0030624:+18864 | Msa1443960:CDS |
GCCCTGCCAATCTATAACTG+GGG | 0.648189 | tig0030624:-10877 | Msa1443960:intergenic |
AAAACCAGTAGCGGAGCTAG+CGG | 0.648543 | tig0030624:-7950 | Msa1443960:intergenic |
GTCATGGTGTATACGTGGCA+AGG | 0.651209 | tig0030624:+23002 | Msa1443960:CDS |
ATCAACGACAAAACCAGTAG+CGG | 0.653355 | tig0030624:-7959 | Msa1443960:intergenic |
GCTAACAGATGAACAAGGAA+GGG | 0.658389 | tig0030624:+18848 | Msa1443960:CDS |
AATGCTTGTTGTGGAATCTG+TGG | 0.658806 | tig0030624:+11999 | Msa1443960:CDS |
AAGCGCTTCATCACTCGACG+TGG | 0.662276 | tig0030624:+7628 | Msa1443960:five_prime_UTR |
ATTGGTCGCTCTGTAACGTG+GGG | 0.662916 | tig0030624:-18674 | Msa1443960:intergenic |
GGTAACAACTGATTTCCTAG+AGG | 0.669880 | tig0030624:-18614 | Msa1443960:intergenic |
GAAGATCATCAATTCGTGAG+GGG | 0.671912 | tig0030624:+20655 | Msa1443960:CDS |
AGTTCAGGATCCACATTCAG+CGG | 0.672282 | tig0030624:+22949 | Msa1443960:CDS |
TTGTTTATGTGACAGAACCA+GGG | 0.674020 | tig0030624:+14607 | Msa1443960:CDS |
TATGTCCTTGAATGAACCCG+AGG | 0.680888 | tig0030624:+17294 | Msa1443960:CDS |
CCATCAAGCATACAAGATGG+AGG | 0.681025 | tig0030624:-17597 | Msa1443960:intergenic |
TCGTCCCGAGTGTAAATCTG+GGG | 0.682855 | tig0030624:-16980 | Msa1443960:intergenic |
ACGCGGACAAGGACATCACC+CGG | 0.688023 | tig0030624:-12140 | Msa1443960:intergenic |
TGCTCATTCATACAGAACTG+CGG | 0.688452 | tig0030624:-24993 | Msa1443960:intergenic |
AAGCAGGCTTAGCAATCCAG+AGG | 0.690606 | tig0030624:-17012 | Msa1443960:intergenic |
GGACCAAAGGAGGATCAAGT+GGG | 0.691475 | tig0030624:+10853 | Msa1443960:CDS |
TCAGAGCCGGCATTACGTCG+AGG | 0.694756 | tig0030624:+18547 | Msa1443960:intron |
TGAAGAAATATCTTGCCTTG+AGG | 0.697385 | tig0030624:+15059 | Msa1443960:CDS |
AGAGGGTCATGGTGTATACG+TGG | 0.702462 | tig0030624:+22997 | Msa1443960:CDS |
AGAAACTTCCGATTTCACTG+TGG | 0.714966 | tig0030624:+14582 | Msa1443960:CDS |
ATGCCAGTTTCTATACCTCG+TGG | 0.733202 | tig0030624:+11153 | Msa1443960:CDS |
TTTGTCGTTGATAAACGACG+TGG | 0.739358 | tig0030624:+7970 | Msa1443960:CDS |
ACTGGTGAACATGCTCGTGG+GGG | 0.740757 | tig0030624:+17109 | Msa1443960:CDS |
CAATGGAAGATCCATCGGAG+CGG | 0.747860 | tig0030624:+7740 | Msa1443960:exon |
GGTGTGCTAACAGATGAACA+AGG | 0.776902 | tig0030624:+18843 | Msa1443960:CDS |
CAAACCTGAAGAGTACCACG+AGG | 0.796613 | tig0030624:-11168 | Msa1443950:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATGAAAAATATACAT+GGG | + | tig0030624:9019-9038 | Msa1443960:intron | 10.0% |
!!! | TCTACAATTATTAATTATTT+TGG | + | tig0030624:10225-10244 | Msa1443960:intron | 10.0% |
!! | TGTTAAAAATTAAAATTAGA+AGG | - | tig0030624:10535-10554 | Msa1443960:intergenic | 10.0% |
!! | TATCTAAAGAAAAATTATAA+TGG | - | tig0030624:12041-12060 | Msa1443960:intergenic | 10.0% |
!!! | AAAATGCAAAAAAAATTTTT+TGG | - | tig0030624:12209-12228 | Msa1443960:intergenic | 10.0% |
!!! | TTTATTTATGTAATTTTATG+AGG | - | tig0030624:13201-13220 | Msa1443960:intergenic | 10.0% |
!! | CTAAAAAAATTTGATAAAAT+TGG | - | tig0030624:13258-13277 | Msa1443960:intergenic | 10.0% |
!!! | TTTTTAATGGTAAATTAAAT+AGG | + | tig0030624:14093-14112 | Msa1443960:intron | 10.0% |
!!! | TTTTAATGGTAAATTAAATA+GGG | + | tig0030624:14094-14113 | Msa1443960:intron | 10.0% |
!!! | AAAATTAGTTTCTAATATTA+GGG | - | tig0030624:15498-15517 | Msa1443960:intergenic | 10.0% |
!!! | TAAAATTAGTTTCTAATATT+AGG | - | tig0030624:15499-15518 | Msa1443960:intergenic | 10.0% |
!!! | TAATATTAGAAACTAATTTT+AGG | + | tig0030624:15498-15517 | Msa1443960:intron | 10.0% |
!! | AATATAATAAAAGTTAGAAA+AGG | - | tig0030624:15588-15607 | Msa1443960:intergenic | 10.0% |
!! | GGATAATAAATAAATAAATT+GGG | + | tig0030624:18131-18150 | Msa1443960:intron | 10.0% |
!! | TAACTTTAATTAATAAAGAA+GGG | + | tig0030624:20176-20195 | Msa1443960:intron | 10.0% |
!! | TAAAGAAACTATTAAAATTT+AGG | - | tig0030624:20557-20576 | Msa1443960:intergenic | 10.0% |
!!! | TTTTTCAGTATAATTATTAT+TGG | - | tig0030624:22121-22140 | Msa1443960:intergenic | 10.0% |
!!! | ATTTTATTTTTTCATGATTA+TGG | - | tig0030624:25329-25348 | Msa1443960:intergenic | 10.0% |
!!! | ACTAATATAACTAGTTTATA+AGG | + | tig0030624:8985-9004 | Msa1443960:intron | 15.0% |
!!! | CTAATATAACTAGTTTATAA+GGG | + | tig0030624:8986-9005 | Msa1443960:intron | 15.0% |
!! | GTAATAATGAAAAATATACA+TGG | + | tig0030624:9018-9037 | Msa1443960:intron | 15.0% |
!!! | TGAGTTTTTATATTATACAA+GGG | - | tig0030624:9393-9412 | Msa1443960:intergenic | 15.0% |
!!! | ATGAGTTTTTATATTATACA+AGG | - | tig0030624:9394-9413 | Msa1443960:intergenic | 15.0% |
!! | TAATATAAAAACTCATATTG+TGG | + | tig0030624:9398-9417 | Msa1443960:intron | 15.0% |
!! | AATAATTGTAGAAAATTATC+AGG | - | tig0030624:10217-10236 | Msa1443960:intergenic | 15.0% |
!!! | TCTTTTTTATGTATATGATA+TGG | + | tig0030624:10345-10364 | Msa1443960:intron | 15.0% |
!!! | TATTTTTTATTAAATATGGC+TGG | + | tig0030624:10639-10658 | Msa1443960:intron | 15.0% |
!! | AAGTTTATAATAACTTTACA+TGG | + | tig0030624:10732-10751 | Msa1443960:intron | 15.0% |
!! | AAAAGTAAATCAATGTATTT+AGG | - | tig0030624:11073-11092 | Msa1443960:intergenic | 15.0% |
!!! | TATGCTAGTTTATAATAATA+GGG | - | tig0030624:11295-11314 | Msa1443960:intergenic | 15.0% |
!!! | ATATGCTAGTTTATAATAAT+AGG | - | tig0030624:11296-11315 | Msa1443960:intergenic | 15.0% |
!! | AAGTTATTTATCATTGATAT+TGG | + | tig0030624:11449-11468 | Msa1443960:intron | 15.0% |
!!! | TATGTTTATTTTTGTGAAAA+TGG | + | tig0030624:11559-11578 | Msa1443960:intron | 15.0% |
!! | AAATTCCATAAAAAACAAAA+TGG | - | tig0030624:11590-11609 | Msa1443960:intergenic | 15.0% |
!! | ATAACATATTAAAGATGAAA+CGG | - | tig0030624:11664-11683 | Msa1443960:intergenic | 15.0% |
!!! | ATTTGATTTTTTAGATAGTA+CGG | + | tig0030624:11950-11969 | Msa1443960:intron | 15.0% |
!! | ATATTGAATTACAAATTGAA+AGG | + | tig0030624:12942-12961 | Msa1443960:CDS | 15.0% |
!! | TATTGAATTACAAATTGAAA+GGG | + | tig0030624:12943-12962 | Msa1443960:CDS | 15.0% |
!! | AAATAAAATCATAACACATT+TGG | - | tig0030624:13416-13435 | Msa1443960:intergenic | 15.0% |
!!! | ATGTGTTATGATTTTATTTT+TGG | + | tig0030624:13417-13436 | Msa1443960:intron | 15.0% |
!!! | TGTGTTATGATTTTATTTTT+GGG | + | tig0030624:13418-13437 | Msa1443960:intron | 15.0% |
!! | TTATGATATCAAATAATAGT+GGG | - | tig0030624:14049-14068 | Msa1443960:intergenic | 15.0% |
!! | TTTAATGGTAAATTAAATAG+GGG | + | tig0030624:14095-14114 | Msa1443960:intron | 15.0% |
!!! | TATAAAAGAGTCTTATAATT+AGG | + | tig0030624:14195-14214 | Msa1443960:intron | 15.0% |
!!! | ATAAAAGAGTCTTATAATTA+GGG | + | tig0030624:14196-14215 | Msa1443960:intron | 15.0% |
!!! | AGTTATTTCTTGATATATTT+AGG | + | tig0030624:14795-14814 | Msa1443960:intron | 15.0% |
!!! | TAATTTTTTTATTCAACAAC+AGG | - | tig0030624:15209-15228 | Msa1443960:intergenic | 15.0% |
!! | TTAAAAAAGATTATATTGCT+AGG | + | tig0030624:15703-15722 | Msa1443960:intron | 15.0% |
!! | TAAAAAAGATTATATTGCTA+GGG | + | tig0030624:15704-15723 | Msa1443960:intron | 15.0% |
!!! | AATATGTACAAACTAATTTT+TGG | + | tig0030624:15767-15786 | Msa1443960:intron | 15.0% |
!!! | TTTTTTGGTTCATTAAATTA+TGG | + | tig0030624:15796-15815 | Msa1443960:intron | 15.0% |
!!! | AAAAATAATTGAGTTGTTAA+GGG | + | tig0030624:15841-15860 | Msa1443960:intron | 15.0% |
!!! | ATATTCTTACTCATTTATTT+TGG | + | tig0030624:15991-16010 | Msa1443960:intron | 15.0% |
!! | AACATAAAATAATGTTTCTT+AGG | + | tig0030624:16317-16336 | Msa1443960:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTCCCTA+TGG | + | tig0030624:17542-17561 | Msa1443960:intron | 15.0% |
!! | TTTATTTATTTATTATCCCA+AGG | - | tig0030624:18129-18148 | Msa1443960:intergenic | 15.0% |
!! | GGGATAATAAATAAATAAAT+TGG | + | tig0030624:18130-18149 | Msa1443960:intron | 15.0% |
!! | ATTAATATTAGAAAGTAAGA+AGG | - | tig0030624:19678-19697 | Msa1443960:intergenic | 15.0% |
!! | CTTACTTTCTAATATTAATT+AGG | + | tig0030624:19679-19698 | Msa1443960:intron | 15.0% |
!!! | TAACTGTTTTTTAAGTATTA+TGG | + | tig0030624:19711-19730 | Msa1443960:intron | 15.0% |
!!! | TGTATATAACCTTTTTAATT+AGG | + | tig0030624:19784-19803 | Msa1443960:intron | 15.0% |
!!! | TTGTTAATTTTTATATGGAT+TGG | - | tig0030624:19889-19908 | Msa1443960:intergenic | 15.0% |
!!! | AAATTTTGCTAAAATAAAGT+GGG | - | tig0030624:19916-19935 | Msa1443960:intergenic | 15.0% |
!! | CTAACTTTAATTAATAAAGA+AGG | + | tig0030624:20175-20194 | Msa1443960:intron | 15.0% |
!! | AATATTTGAAAATTAGTTCA+GGG | - | tig0030624:20423-20442 | Msa1443960:intergenic | 15.0% |
!! | AAATATTTGAAAATTAGTTC+AGG | - | tig0030624:20424-20443 | Msa1443960:intergenic | 15.0% |
!!! | AAGTTTGTTCAATAAATATT+TGG | - | tig0030624:20467-20486 | Msa1443960:intergenic | 15.0% |
!!! | AGAGATGTAATAATTAATTT+TGG | - | tig0030624:22370-22389 | Msa1443960:intergenic | 15.0% |
!! | TTAATAACAAATCTTGTTAA+TGG | - | tig0030624:22496-22515 | Msa1443960:intergenic | 15.0% |
!!! | TTAACAAGATTTGTTATTAA+TGG | + | tig0030624:22496-22515 | Msa1443960:intron | 15.0% |
!!! | AAATTTTTATATTCTCGAAA+AGG | + | tig0030624:23048-23067 | Msa1443960:intron | 15.0% |
!!! | AATTTTTATATTCTCGAAAA+GGG | + | tig0030624:23049-23068 | Msa1443960:intron | 15.0% |
!! | ATATGATATAATTAACCAAT+GGG | - | tig0030624:25294-25313 | Msa1443960:intergenic | 15.0% |
!! | TATATGATATAATTAACCAA+TGG | - | tig0030624:25295-25314 | Msa1443960:intergenic | 15.0% |
!! | AATGTATAGTGAATTATGTT+TGG | + | tig0030624:8814-8833 | Msa1443960:intron | 20.0% |
!! | ATGTATAGTGAATTATGTTT+GGG | + | tig0030624:8815-8834 | Msa1443960:intron | 20.0% |
!!! | ATCAAATTGATATGTTTTCA+TGG | + | tig0030624:10108-10127 | Msa1443960:intron | 20.0% |
!! | ATCAAATATCAATGAGTATA+TGG | - | tig0030624:10817-10836 | Msa1443960:intergenic | 20.0% |
!! | TTCAATAATACATAAAGTGT+CGG | - | tig0030624:11003-11022 | Msa1443960:intergenic | 20.0% |
!!! | AATACATTGATTTACTTTTC+AGG | + | tig0030624:11074-11093 | Msa1443960:intron | 20.0% |
!! | GATTTCAACATATATGTTAA+TGG | + | tig0030624:11256-11275 | Msa1443960:intron | 20.0% |
!! | ACAAGATAAAATCAAAATCT+CGG | + | tig0030624:11351-11370 | Msa1443960:intron | 20.0% |
!! | TGAAAGAAAAAATAATTTCG+TGG | + | tig0030624:11481-11500 | Msa1443960:intron | 20.0% |
!!! | AGATTTATTTTGAGAGAAAA+TGG | + | tig0030624:11509-11528 | Msa1443960:intron | 20.0% |
!!! | AGAATTTTTTTTCTTCTTCT+TGG | + | tig0030624:11727-11746 | Msa1443960:intron | 20.0% |
!!! | CAAAAAAAATTTTTTGGAAG+GGG | - | tig0030624:12203-12222 | Msa1443960:intergenic | 20.0% |
!!! | GCAAAAAAAATTTTTTGGAA+GGG | - | tig0030624:12204-12223 | Msa1443960:intergenic | 20.0% |
!!! | TGCAAAAAAAATTTTTTGGA+AGG | - | tig0030624:12205-12224 | Msa1443960:intergenic | 20.0% |
!!! | TATTTCTTTGAGTTTTTTGT+CGG | + | tig0030624:12253-12272 | Msa1443960:intron | 20.0% |
!!! | ACTAATTAAATTAGAAGTGT+TGG | + | tig0030624:12396-12415 | Msa1443960:intron | 20.0% |
!! | TAAATAAACCATTGAAGTAA+CGG | + | tig0030624:12419-12438 | Msa1443960:intron | 20.0% |
!! | ATTTATCACTTTCAATTAGT+AGG | + | tig0030624:12488-12507 | Msa1443960:intron | 20.0% |
!!! | CAATTATCAAAGTGATTTTT+AGG | - | tig0030624:12729-12748 | Msa1443960:intergenic | 20.0% |
!! | ATTGAATTACAAATTGAAAG+GGG | + | tig0030624:12944-12963 | Msa1443960:CDS | 20.0% |
!!! | ACCAAACTCTATATTTTTTA+TGG | + | tig0030624:13127-13146 | Msa1443960:intron | 20.0% |
!!! | CCAAACTCTATATTTTTTAT+GGG | + | tig0030624:13128-13147 | Msa1443960:intron | 20.0% |
!!! | TCTATATTTTTTATGGGAAT+CGG | + | tig0030624:13134-13153 | Msa1443960:intron | 20.0% |
!!! | TTATGTAATTTTATGAGGTT+AGG | - | tig0030624:13196-13215 | Msa1443960:intergenic | 20.0% |
!! | TAAATATTTCCCTATTTCAT+GGG | - | tig0030624:13539-13558 | Msa1443960:intergenic | 20.0% |
!! | AATTGATAGAGTATAAAACT+AGG | + | tig0030624:13586-13605 | Msa1443960:intron | 20.0% |
!! | AGATGAACATTTAGAAAAAT+TGG | - | tig0030624:13694-13713 | Msa1443960:intergenic | 20.0% |
!!! | CTAACTTGTAAGAAATAATT+GGG | - | tig0030624:13744-13763 | Msa1443960:intergenic | 20.0% |
!!! | ACTAACTTGTAAGAAATAAT+TGG | - | tig0030624:13745-13764 | Msa1443960:intergenic | 20.0% |
!!! | AATTATTTCTTACAAGTTAG+TGG | + | tig0030624:13744-13763 | Msa1443960:CDS | 20.0% |
!!! | ACAAGTTTTTTCATTTGAAT+AGG | - | tig0030624:13895-13914 | Msa1443960:intergenic | 20.0% |
!! | TATGATATCAAATAATAGTG+GGG | - | tig0030624:14048-14067 | Msa1443960:intergenic | 20.0% |
!! | CTTATGATATCAAATAATAG+TGG | - | tig0030624:14050-14069 | Msa1443960:intergenic | 20.0% |
!!! | AAAACCTTACGTTTTTTTAA+TGG | + | tig0030624:14080-14099 | Msa1443960:intron | 20.0% |
!! | TTTACCATTAAAAAAACGTA+AGG | - | tig0030624:14087-14106 | Msa1443960:intergenic | 20.0% |
!!! | TTGAAAAGAGTCTTATATTA+AGG | + | tig0030624:14159-14178 | Msa1443960:intron | 20.0% |
!!! | TGAAAAGAGTCTTATATTAA+GGG | + | tig0030624:14160-14179 | Msa1443960:intron | 20.0% |
!! | GTACTAATTTCATAAATTTC+AGG | - | tig0030624:14238-14257 | Msa1443960:intergenic | 20.0% |
!! | CCAATATAATGAAAGAAAAA+GGG | - | tig0030624:14274-14293 | Msa1443960:intergenic | 20.0% |
!! | ACCAATATAATGAAAGAAAA+AGG | - | tig0030624:14275-14294 | Msa1443960:intergenic | 20.0% |
!! | AAACATAACTATAATGAGAA+AGG | - | tig0030624:14544-14563 | Msa1443960:intergenic | 20.0% |
!! | ATGGAATGATCTAATAAATA+TGG | - | tig0030624:14662-14681 | Msa1443960:intergenic | 20.0% |
!! | TTTAAATTATAACCAGTACT+GGG | + | tig0030624:14726-14745 | Msa1443960:intron | 20.0% |
!! | ATTTAAATACTTACTGTTGT+TGG | + | tig0030624:14827-14846 | Msa1443960:intron | 20.0% |
!! | CAAATTTCTTAATTATTGCA+TGG | - | tig0030624:15035-15054 | Msa1443960:intergenic | 20.0% |
!! | TGTAAGATATGTTAAATCTT+TGG | + | tig0030624:15274-15293 | Msa1443960:intron | 20.0% |
!! | AATAAGAGGTTGAATATTAT+CGG | + | tig0030624:15323-15342 | Msa1443960:intron | 20.0% |
!! | AAACATTAACCTCTATTTAT+AGG | + | tig0030624:15377-15396 | Msa1443960:intron | 20.0% |
!! | AACATTAACCTCTATTTATA+GGG | + | tig0030624:15378-15397 | Msa1443960:intron | 20.0% |
!! | ATTCATAATCATGCATAAAT+AGG | + | tig0030624:15402-15421 | Msa1443960:intron | 20.0% |
!! | TTCATAATCATGCATAAATA+GGG | + | tig0030624:15403-15422 | Msa1443960:intron | 20.0% |
!!! | AATTTTTGGAAGTAGTTTTT+TGG | + | tig0030624:15781-15800 | Msa1443960:intron | 20.0% |
!!! | GAAAAATAATTGAGTTGTTA+AGG | + | tig0030624:15840-15859 | Msa1443960:intron | 20.0% |
!! | AAATTTAGTATGCATTGTAA+TGG | + | tig0030624:16801-16820 | Msa1443960:intron | 20.0% |
!! | TCATGAAACAAAATTAGAAA+TGG | - | tig0030624:16899-16918 | Msa1443960:intergenic | 20.0% |
!! | TATTGAAATGAATAAACAAG+AGG | + | tig0030624:17808-17827 | Msa1443960:intron | 20.0% |
!! | AAATTTAGACTGTTTATAGA+TGG | + | tig0030624:17998-18017 | Msa1443960:intron | 20.0% |
!!! | TATTTTAAATGTGTATGATG+TGG | + | tig0030624:18439-18458 | Msa1443960:intron | 20.0% |
!!! | ATTTTAAATGTGTATGATGT+GGG | + | tig0030624:18440-18459 | Msa1443960:intron | 20.0% |
!!! | TTAGTGTTTTTTCTTATCTT+GGG | - | tig0030624:18966-18985 | Msa1443960:intergenic | 20.0% |
!! | AAAAAACACTAACGTAAATT+GGG | + | tig0030624:18974-18993 | Msa1443960:intron | 20.0% |
!! | ACAAAATAGATATATGGAAA+AGG | - | tig0030624:19049-19068 | Msa1443960:intergenic | 20.0% |
!!! | TCCATATATCTATTTTGTTT+TGG | + | tig0030624:19051-19070 | Msa1443960:intron | 20.0% |
!!! | CCATATATCTATTTTGTTTT+GGG | + | tig0030624:19052-19071 | Msa1443960:intron | 20.0% |
!! | AGTAGTTCTTACTAAAATTT+GGG | - | tig0030624:19206-19225 | Msa1443960:intergenic | 20.0% |
!! | ATATTTACTCATACTTCAAA+AGG | + | tig0030624:19608-19627 | Msa1443960:intron | 20.0% |
!!! | ATTAAAGTGCCTAATTAAAA+AGG | - | tig0030624:19796-19815 | Msa1443960:intergenic | 20.0% |
!!! | TTAATTTTTATATGGATTGG+TGG | - | tig0030624:19886-19905 | Msa1443960:intergenic | 20.0% |
!!! | GATGCTTGTTAATTTTTATA+TGG | - | tig0030624:19894-19913 | Msa1443960:intergenic | 20.0% |
!!! | GAAATTTTGCTAAAATAAAG+TGG | - | tig0030624:19917-19936 | Msa1443960:intergenic | 20.0% |
!! | GTGTACATAAGATTAAAATT+AGG | - | tig0030624:20351-20370 | Msa1443960:intergenic | 20.0% |
!! | TAGAAGCTTACTTAAAATAT+AGG | - | tig0030624:20534-20553 | Msa1443960:intergenic | 20.0% |
!! | TTCAAAGTAAATATTACACA+TGG | - | tig0030624:20919-20938 | Msa1443960:intergenic | 20.0% |
!!! | AGGATGCATATTAATATTTT+TGG | - | tig0030624:21065-21084 | Msa1443960:intergenic | 20.0% |
!! | TTTCATATAGTAAACCAAAA+GGG | - | tig0030624:21192-21211 | Msa1443960:intergenic | 20.0% |
!!! | TTTTCATATAGTAAACCAAA+AGG | - | tig0030624:21193-21212 | Msa1443960:intergenic | 20.0% |
!!! | AATTGTTGCTTATTTTCTTT+TGG | - | tig0030624:21983-22002 | Msa1443960:intergenic | 20.0% |
!! | AAAAGAAAATAAGCAACAAT+TGG | + | tig0030624:21982-22001 | Msa1443960:intron | 20.0% |
!! | AAAGAAAATAAGCAACAATT+GGG | + | tig0030624:21983-22002 | Msa1443960:intron | 20.0% |
!! | TGAATTTATTGATAAATCCT+TGG | + | tig0030624:22145-22164 | Msa1443960:intron | 20.0% |
!!! | AGATTTGTTATTAATGGTTT+TGG | + | tig0030624:22502-22521 | Msa1443960:intron | 20.0% |
!!! | GATTTGTTATTAATGGTTTT+GGG | + | tig0030624:22503-22522 | Msa1443960:intron | 20.0% |
!!! | AACTTTTGTCTTATTTTTTG+AGG | + | tig0030624:22810-22829 | Msa1443960:intron | 20.0% |
!!! | ACTTTTGTCTTATTTTTTGA+GGG | + | tig0030624:22811-22830 | Msa1443960:intron | 20.0% |
!!! | TTTTCAATAATTCTCTCATT+TGG | + | tig0030624:23241-23260 | Msa1443960:intron | 20.0% |
!!! | TTTGTTTCAGTCTTAAATTT+TGG | + | tig0030624:24069-24088 | Msa1443960:intron | 20.0% |
!!! | GTTATAATTTTTTGAAGTGA+GGG | - | tig0030624:24113-24132 | Msa1443960:intergenic | 20.0% |
!!! | AGTTATAATTTTTTGAAGTG+AGG | - | tig0030624:24114-24133 | Msa1443960:intergenic | 20.0% |
!! | TTAACAAAAGAATCTATATC+TGG | - | tig0030624:24381-24400 | Msa1443960:intergenic | 20.0% |
!! | TTATTAGCATAAGTCATTTA+TGG | + | tig0030624:24626-24645 | Msa1443960:intron | 20.0% |
!! | TATAATTATTTCACGAATGT+TGG | + | tig0030624:24806-24825 | Msa1443960:intron | 20.0% |
!!! | TGAAATTTCAAAGTATCAAA+GGG | - | tig0030624:25439-25458 | Msa1443960:intergenic | 20.0% |
!!! | ATGAAATTTCAAAGTATCAA+AGG | - | tig0030624:25440-25459 | Msa1443960:intergenic | 20.0% |
!!! | AGTTTTGCTTTTCTTCAATT+CGG | + | tig0030624:8048-8067 | Msa1443960:intron | 25.0% |
! | GTCATTTACAACTTAAATAC+AGG | - | tig0030624:8294-8313 | Msa1443960:intergenic | 25.0% |
!! | ATTGATTCTAACTTGTATGT+TGG | + | tig0030624:8439-8458 | Msa1443960:intron | 25.0% |
! | TCAATAAAGTTATGCAAAAG+TGG | + | tig0030624:8537-8556 | Msa1443960:intron | 25.0% |
! | CAATAAAGTTATGCAAAAGT+GGG | + | tig0030624:8538-8557 | Msa1443960:intron | 25.0% |
!! | TCAAATAGAGTCAATTTTAG+AGG | + | tig0030624:8621-8640 | Msa1443960:intron | 25.0% |
!!! | TACACTTCTAGAATCAATTT+TGG | + | tig0030624:8691-8710 | Msa1443960:intron | 25.0% |
!! | ATGTTTGGTTTCATTTCTAA+AGG | - | tig0030624:8719-8738 | Msa1443960:intergenic | 25.0% |
! | ACAAATCACTTCTATTAACA+AGG | - | tig0030624:8843-8862 | Msa1443960:intergenic | 25.0% |
! | TTTGTATGAAAGATGTTGTT+TGG | + | tig0030624:8858-8877 | Msa1443960:intron | 25.0% |
!!! | TTTGTGTCAAAATTGCTTTT+GGG | + | tig0030624:8885-8904 | Msa1443960:intron | 25.0% |
!! | GATACTTTTATGAAGTTGTT+TGG | - | tig0030624:9143-9162 | Msa1443960:intergenic | 25.0% |
!!! | AGTAGCTTTTTAGTCTAAAT+GGG | + | tig0030624:9235-9254 | Msa1443960:intron | 25.0% |
! | GCAAAAAATATAGTATGATC+AGG | - | tig0030624:9425-9444 | Msa1443960:intergenic | 25.0% |
!!! | TACATGATTTTGGGTTTTTT+CGG | + | tig0030624:9589-9608 | Msa1443960:CDS | 25.0% |
! | TTTAGAAATTGTATAGCACT+AGG | - | tig0030624:9621-9640 | Msa1443960:intergenic | 25.0% |
!!! | GTTTCATTTTCATTGATTTC+TGG | + | tig0030624:9769-9788 | Msa1443960:intron | 25.0% |
!!! | CTAAACTATTTTTTGATGCA+GGG | + | tig0030624:10398-10417 | Msa1443960:intron | 25.0% |
!!! | AAACTCATAGTTTGAGTTTT+TGG | - | tig0030624:10498-10517 | Msa1443960:intergenic | 25.0% |
! | ATATGGTTACAATCAAGTAA+TGG | - | tig0030624:10800-10819 | Msa1443960:intergenic | 25.0% |
!! | CTCATTGATATTTGATTTAC+AGG | + | tig0030624:10821-10840 | Msa1443960:intron | 25.0% |
!!! | ATTCTTTTTACCTTTGGAAA+GGG | + | tig0030624:10947-10966 | Msa1443960:CDS | 25.0% |
! | GACACTTTATGTATTATTGA+AGG | + | tig0030624:11002-11021 | Msa1443960:intron | 25.0% |
! | TTGGGAGTAACTTATTTAAT+TGG | + | tig0030624:11035-11054 | Msa1443960:intron | 25.0% |
!! | GTGAAACTTATGTTGATAAA+TGG | + | tig0030624:11130-11149 | Msa1443960:CDS | 25.0% |
! | CATATATGTTAATGGCATAT+AGG | + | tig0030624:11264-11283 | Msa1443960:intron | 25.0% |
!!! | TTTATTTTGAGAGAAAATGG+TGG | + | tig0030624:11512-11531 | Msa1443960:intron | 25.0% |
!!! | AACTGCCATTTTGTTTTTTA+TGG | + | tig0030624:11582-11601 | Msa1443960:intron | 25.0% |
! | TATGGAATTTCAAATACTTC+TGG | + | tig0030624:11600-11619 | Msa1443960:intron | 25.0% |
! | ATGGAATTTCAAATACTTCT+GGG | + | tig0030624:11601-11620 | Msa1443960:intron | 25.0% |
!!! | TGAAACGGATTAATAGAAAA+CGG | - | tig0030624:11649-11668 | Msa1443960:intergenic | 25.0% |
! | TAAAGCTGAAGAAATTGAAA+TGG | - | tig0030624:12070-12089 | Msa1443960:intergenic | 25.0% |
!!! | CTTTACTCTTTGATTTGTTT+AGG | + | tig0030624:12085-12104 | Msa1443960:intron | 25.0% |
! | AACTCAAAGAAATAATGCAA+AGG | - | tig0030624:12247-12266 | Msa1443960:intergenic | 25.0% |
!! | CTTTGTTTGACAAATTTACT+TGG | + | tig0030624:12315-12334 | Msa1443960:intron | 25.0% |
!!! | AAAGTGATTTTTAGGAATTC+TGG | - | tig0030624:12721-12740 | Msa1443960:intergenic | 25.0% |
!! | ATCAAAGAGTTTAACTCTTT+TGG | + | tig0030624:12973-12992 | Msa1443960:CDS | 25.0% |
!!! | TTTTGGTGAGAGTTTTATTA+TGG | + | tig0030624:12990-13009 | Msa1443960:intron | 25.0% |
! | CAAACAAAACTAATGTCAAA+CGG | - | tig0030624:13103-13122 | Msa1443960:intergenic | 25.0% |
! | CCCATAAAAAATATAGAGTT+TGG | - | tig0030624:13131-13150 | Msa1443960:intergenic | 25.0% |
! | ATTTGGTTACAACAGATTAA+AGG | - | tig0030624:13399-13418 | Msa1443960:intergenic | 25.0% |
! | GTAAATATTTCCCTATTTCA+TGG | - | tig0030624:13540-13559 | Msa1443960:intergenic | 25.0% |
!! | TTTTTCTAAATGTTCATCTC+AGG | + | tig0030624:13695-13714 | Msa1443960:intron | 25.0% |
! | AATCAAATCATTAATCCATG+TGG | + | tig0030624:14132-14151 | Msa1443960:intron | 25.0% |
!! | CCCTTTTTCTTTCATTATAT+TGG | + | tig0030624:14271-14290 | Msa1443960:intron | 25.0% |
! | ACTATTTCATATGTATGAGA+TGG | - | tig0030624:14355-14374 | Msa1443960:intergenic | 25.0% |
! | ATAACTATAATGAGAAAGGT+AGG | - | tig0030624:14540-14559 | Msa1443960:intergenic | 25.0% |
!! | ATATCCAATTTTGTGTCAAA+TGG | - | tig0030624:14681-14700 | Msa1443960:intergenic | 25.0% |
! | CTTTAAATTATAACCAGTAC+TGG | + | tig0030624:14725-14744 | Msa1443960:intron | 25.0% |
! | TATCAAGAAATAACTCTTAC+CGG | - | tig0030624:14790-14809 | Msa1443960:intergenic | 25.0% |
! | GCAATAATTAAGAAATTTGC+TGG | + | tig0030624:15036-15055 | Msa1443960:CDS | 25.0% |
!!! | AGTTATTTCTAAGCTATCAA+GGG | + | tig0030624:15092-15111 | Msa1443960:CDS | 25.0% |
! | ATAAAAAAATTACGTCCAAG+TGG | + | tig0030624:15217-15236 | Msa1443960:intron | 25.0% |
! | AGTAAAAGAGAGATAATAAG+AGG | + | tig0030624:15309-15328 | Msa1443960:intron | 25.0% |
! | ACATTAACCTCTATTTATAG+GGG | + | tig0030624:15379-15398 | Msa1443960:intron | 25.0% |
! | ATGATAATAACCATGTCATA+TGG | + | tig0030624:15443-15462 | Msa1443960:intron | 25.0% |
!!! | TATTTTGGTCTGTAAGATAT+CGG | + | tig0030624:16006-16025 | Msa1443960:intron | 25.0% |
! | ACATGTAAGATATCTAAACT+TGG | - | tig0030624:16272-16291 | Msa1443960:intergenic | 25.0% |
!!! | TCTTTCAAATTTTTTGAGAG+TGG | + | tig0030624:16414-16433 | Msa1443960:intron | 25.0% |
! | GAACTAAAAAATTGTATTGG+AGG | - | tig0030624:16564-16583 | Msa1443960:intergenic | 25.0% |
!!! | TTTGATCTAACATGTTTTTG+TGG | + | tig0030624:16765-16784 | Msa1443960:intron | 25.0% |
! | TATACCCAGATGATAAATAA+GGG | - | tig0030624:17051-17070 | Msa1443960:intergenic | 25.0% |
! | TTATACCCAGATGATAAATA+AGG | - | tig0030624:17052-17071 | Msa1443960:intergenic | 25.0% |
!!! | GTTCATTCACAACATTTTTT+TGG | + | tig0030624:17621-17640 | Msa1443960:CDS | 25.0% |
! | AATATATCACACTCAAGATT+TGG | + | tig0030624:17656-17675 | Msa1443960:CDS | 25.0% |
! | ATATATCACACTCAAGATTT+GGG | + | tig0030624:17657-17676 | Msa1443960:CDS | 25.0% |
! | TATCTAAATGTGTATAACGT+TGG | - | tig0030624:18753-18772 | Msa1443960:intergenic | 25.0% |
!! | ATGTGTTTGAATACAGATTT+TGG | + | tig0030624:18807-18826 | Msa1443960:intron | 25.0% |
!!! | GTTAGTGTTTTTTCTTATCT+TGG | - | tig0030624:18967-18986 | Msa1443960:intergenic | 25.0% |
! | GAAAAAACACTAACGTAAAT+TGG | + | tig0030624:18973-18992 | Msa1443960:intron | 25.0% |
! | CCCAAAACAAAATAGATATA+TGG | - | tig0030624:19055-19074 | Msa1443960:intergenic | 25.0% |
!! | TTTTTACGGTATAGTCAAAA+AGG | - | tig0030624:19107-19126 | Msa1443960:intergenic | 25.0% |
!!! | CAGTAAGGTTGAATTTTTTA+CGG | - | tig0030624:19121-19140 | Msa1443960:intergenic | 25.0% |
! | AAATAAATCAACACCAGATT+TGG | + | tig0030624:19158-19177 | Msa1443960:intron | 25.0% |
! | AATAAATCAACACCAGATTT+GGG | + | tig0030624:19159-19178 | Msa1443960:intron | 25.0% |
! | TAGTTCTTACTAAAATTTGG+GGG | - | tig0030624:19204-19223 | Msa1443960:intergenic | 25.0% |
! | GTAGTTCTTACTAAAATTTG+GGG | - | tig0030624:19205-19224 | Msa1443960:intergenic | 25.0% |
! | GAGTAGTTCTTACTAAAATT+TGG | - | tig0030624:19207-19226 | Msa1443960:intergenic | 25.0% |
!! | ATTGTTTAAAGTTTCTCTAC+GGG | - | tig0030624:19457-19476 | Msa1443960:intergenic | 25.0% |
!! | CATTGTTTAAAGTTTCTCTA+CGG | - | tig0030624:19458-19477 | Msa1443960:intergenic | 25.0% |
!! | ACCTATTCTATGATAGTTTT+TGG | + | tig0030624:19479-19498 | Msa1443960:intron | 25.0% |
! | ACCAAAAACTATCATAGAAT+AGG | - | tig0030624:19483-19502 | Msa1443960:intergenic | 25.0% |
! | AACAAGATTAAATTCAAGTG+TGG | + | tig0030624:19824-19843 | Msa1443960:intron | 25.0% |
!!! | GGAATATTGTAATCTTGTTT+TGG | + | tig0030624:20016-20035 | Msa1443960:intron | 25.0% |
!!! | ATATTGTAATCTTGTTTTGG+TGG | + | tig0030624:20019-20038 | Msa1443960:intron | 25.0% |
!! | TTATTTTCATACCACATTGT+AGG | + | tig0030624:20077-20096 | Msa1443960:intron | 25.0% |
! | AAGTATCAAATGATCATTCA+TGG | + | tig0030624:20310-20329 | Msa1443960:intron | 25.0% |
! | CAAAATATTGAAGACTGAAA+AGG | + | tig0030624:20487-20506 | Msa1443960:intron | 25.0% |
! | ACTTCTAATATTCTCAGAAA+TGG | - | tig0030624:20775-20794 | Msa1443960:intergenic | 25.0% |
! | TTATCCAACATTACTTTCAA+AGG | + | tig0030624:20801-20820 | Msa1443960:CDS | 25.0% |
! | AAGTAAATATTACACATGGA+AGG | - | tig0030624:20915-20934 | Msa1443960:intergenic | 25.0% |
!! | ACTTTGAAAGAATCTATGTT+CGG | + | tig0030624:20931-20950 | Msa1443960:intron | 25.0% |
!!! | AATATTTTTGGTTGTTCCAA+AGG | - | tig0030624:21053-21072 | Msa1443960:intergenic | 25.0% |
!! | AGAAAACTTTTCTTCTACAT+TGG | - | tig0030624:21146-21165 | Msa1443960:intergenic | 25.0% |
!! | ACGTGATTTTGTTAACAAAA+CGG | - | tig0030624:21285-21304 | Msa1443960:intergenic | 25.0% |
! | CAACAAAATTAACCTCTTAA+CGG | - | tig0030624:21419-21438 | Msa1443960:intergenic | 25.0% |
!! | CTTGTTATATTAGTGAGTTA+TGG | + | tig0030624:21514-21533 | Msa1443960:intron | 25.0% |
! | TCTGTTCTTTAGTTATTCTT+AGG | + | tig0030624:22424-22443 | Msa1443960:intron | 25.0% |
!! | TATCAGATTTATCTAAAGCT+TGG | - | tig0030624:22698-22717 | Msa1443960:intergenic | 25.0% |
! | TTGCAAGTAAATTTGTATGA+GGG | + | tig0030624:23115-23134 | Msa1443960:intron | 25.0% |
! | ATATTAAAATGCACAGATAC+TGG | + | tig0030624:23767-23786 | Msa1443960:intron | 25.0% |
!!! | AGCAGCTATTTTACTAAAAA+GGG | - | tig0030624:23997-24016 | Msa1443960:intergenic | 25.0% |
!!! | AAGCAGCTATTTTACTAAAA+AGG | - | tig0030624:23998-24017 | Msa1443960:intergenic | 25.0% |
!! | TTTTAGTAAAATAGCTGCTT+AGG | + | tig0030624:23998-24017 | Msa1443960:intron | 25.0% |
!! | AAATTTTGTGAGCTTATACT+TGG | - | tig0030624:24261-24280 | Msa1443960:intergenic | 25.0% |
!! | TTCTTTTGTTAATGTGACAA+AGG | + | tig0030624:24389-24408 | Msa1443960:CDS | 25.0% |
!! | ATGGAATTTGTTTATAAACC+TGG | + | tig0030624:24645-24664 | Msa1443960:intron | 25.0% |
! | TGAAGCAAGATTTACATTAT+TGG | + | tig0030624:24902-24921 | Msa1443960:CDS | 25.0% |
! | ATATTCACAAGCCAAATAAA+AGG | - | tig0030624:25406-25425 | Msa1443960:intergenic | 25.0% |
TCATAATTGAAACACACGAA+TGG | + | tig0030624:7523-7542 | Msa1443960:five_prime_UTR | 30.0% | |
!!! | AAGCGCTTTTTAACTTTAAC+GGG | - | tig0030624:7616-7635 | Msa1443960:intergenic | 30.0% |
!!! | GAAGCGCTTTTTAACTTTAA+CGG | - | tig0030624:7617-7636 | Msa1443960:intergenic | 30.0% |
TAAACCCTAATCTCATTCAA+TGG | + | tig0030624:7723-7742 | Msa1443960:exon | 30.0% | |
TCTTCCATTGAATGAGATTA+GGG | - | tig0030624:7730-7749 | Msa1443960:intergenic | 30.0% | |
ATCTTCCATTGAATGAGATT+AGG | - | tig0030624:7731-7750 | Msa1443960:intergenic | 30.0% | |
AAGAAAAGCAAAACTATGCA+CGG | - | tig0030624:8043-8062 | Msa1443960:intergenic | 30.0% | |
! | TCTAACTTTTCTTTACGCTT+TGG | + | tig0030624:8087-8106 | Msa1443960:intron | 30.0% |
!! | TATGTTTTTGAATCGTGAAG+AGG | + | tig0030624:8144-8163 | Msa1443960:CDS | 30.0% |
CTTACTGGATCTCTATATAT+CGG | - | tig0030624:8181-8200 | Msa1443960:intergenic | 30.0% | |
AAACAAAGTTGACTACTTAC+TGG | - | tig0030624:8196-8215 | Msa1443960:intergenic | 30.0% | |
CAATCAAGAATATTGCACTA+AGG | - | tig0030624:8237-8256 | Msa1443960:intergenic | 30.0% | |
!! | GATTTTGAGTGAATTGATTC+TGG | + | tig0030624:8481-8500 | Msa1443960:intron | 30.0% |
!!! | GGAGTTTTTGATTCTAGAAT+TGG | - | tig0030624:8590-8609 | Msa1443960:intergenic | 30.0% |
! | CTCTATTTGAAGCTAGAAAT+TGG | - | tig0030624:8611-8630 | Msa1443960:intergenic | 30.0% |
! | CTTTGTGTCAAAATTGCTTT+TGG | + | tig0030624:8884-8903 | Msa1443960:intron | 30.0% |
! | CACATTCCATCTTTTAGTAA+TGG | - | tig0030624:8933-8952 | Msa1443960:intergenic | 30.0% |
!! | TAGTTTATAAGGGCACTTAA+AGG | + | tig0030624:8996-9015 | Msa1443960:intron | 30.0% |
! | TTCTATGAGAAGCATGAATT+TGG | - | tig0030624:9092-9111 | Msa1443960:intergenic | 30.0% |
TGTTTGGATACACATTTAGA+TGG | - | tig0030624:9211-9230 | Msa1443960:intergenic | 30.0% | |
TAAAAAGCTACTCGTATGTT+TGG | - | tig0030624:9227-9246 | Msa1443960:intergenic | 30.0% | |
!! | GAGTAGCTTTTTAGTCTAAA+TGG | + | tig0030624:9234-9253 | Msa1443960:intron | 30.0% |
CAATGCAAAGTGATTATGTT+TGG | - | tig0030624:9300-9319 | Msa1443960:intergenic | 30.0% | |
GGTACAGAAATTGATTATCA+CGG | - | tig0030624:9372-9391 | Msa1443960:intergenic | 30.0% | |
! | ATTGTTCCTCTTTTTCTTTG+TGG | + | tig0030624:9544-9563 | Msa1443960:intron | 30.0% |
AATTAGCCACAAAGAAAAAG+AGG | - | tig0030624:9553-9572 | Msa1443960:intergenic | 30.0% | |
!! | TTTCTTGGTCTTATTCTTGT+TGG | + | tig0030624:9866-9885 | Msa1443960:intron | 30.0% |
TCTTATTCTTGTTGGAACAT+TGG | + | tig0030624:9874-9893 | Msa1443960:intron | 30.0% | |
TTTCCCTTTATTGATGTAGA+TGG | + | tig0030624:10155-10174 | Msa1443960:intron | 30.0% | |
TATCAGGATGAAAGAAAACA+GGG | - | tig0030624:10201-10220 | Msa1443960:intergenic | 30.0% | |
TTATCAGGATGAAAGAAAAC+AGG | - | tig0030624:10202-10221 | Msa1443960:intergenic | 30.0% | |
!!! | TTATTTTGGATTTTACTGCC+AGG | + | tig0030624:10239-10258 | Msa1443960:intron | 30.0% |
ACAACATACTTCTTATAGTG+AGG | - | tig0030624:10309-10328 | Msa1443960:intergenic | 30.0% | |
!!! | GCTAAACTATTTTTTGATGC+AGG | + | tig0030624:10397-10416 | Msa1443960:intron | 30.0% |
ACATTCTATATGCAAGTAAG+TGG | + | tig0030624:10441-10460 | Msa1443960:intron | 30.0% | |
CATTCTATATGCAAGTAAGT+GGG | + | tig0030624:10442-10461 | Msa1443960:intron | 30.0% | |
! | CATTGTGTAATACTTTTCCT+AGG | + | tig0030624:10553-10572 | Msa1443960:intron | 30.0% |
AAACACTTCAAATACAACCT+AGG | - | tig0030624:10573-10592 | Msa1443960:intergenic | 30.0% | |
TAACTAAAGAGCCTTCAATT+TGG | - | tig0030624:10621-10640 | Msa1443960:intergenic | 30.0% | |
GCGTCATTACTAAAATTGTT+AGG | + | tig0030624:10675-10694 | Msa1443960:intron | 30.0% | |
TTCCAAAGGTAAAAAGAATG+CGG | - | tig0030624:10946-10965 | Msa1443960:intergenic | 30.0% | |
!! | CATTCTTTTTACCTTTGGAA+AGG | + | tig0030624:10946-10965 | Msa1443960:CDS | 30.0% |
!!! | ATTTACTTTTCAGGTTGTGA+GGG | + | tig0030624:11083-11102 | Msa1443960:intron | 30.0% |
GCATTAAGGTTTCTTCAAAA+GGG | + | tig0030624:11105-11124 | Msa1443960:CDS | 30.0% | |
CATTAAGGTTTCTTCAAAAG+GGG | + | tig0030624:11106-11125 | Msa1443960:CDS | 30.0% | |
ACCTTGAAATTCTTCTTCTT+AGG | + | tig0030624:11191-11210 | Msa1443960:intron | 30.0% | |
ACCTAAGAAGAAGAATTTCA+AGG | - | tig0030624:11195-11214 | Msa1443960:intergenic | 30.0% | |
CTTCTTCTTGGTTATGTAAT+CGG | + | tig0030624:11739-11758 | Msa1443960:intron | 30.0% | |
TTGGTTATGTAATCGGATAT+CGG | + | tig0030624:11746-11765 | Msa1443960:intron | 30.0% | |
! | AGCCTATAAACATTTAGAAC+CGG | + | tig0030624:12121-12140 | Msa1443960:CDS | 30.0% |
TACATTTACCGTTACTTCAA+TGG | - | tig0030624:12430-12449 | Msa1443960:intergenic | 30.0% | |
CTTGTCATTGTACCTATATT+AGG | - | tig0030624:12576-12595 | Msa1443960:intergenic | 30.0% | |
CTAATATAGGTACAATGACA+AGG | + | tig0030624:12574-12593 | Msa1443960:intron | 30.0% | |
! | TAGTTGCTTTATTCAACAGA+TGG | - | tig0030624:12681-12700 | Msa1443960:intergenic | 30.0% |
!!! | TACAAAAAAGGGTGTTTTCA+CGG | + | tig0030624:12819-12838 | Msa1443960:intron | 30.0% |
TAAACTGCACTAATGTCAAA+CGG | - | tig0030624:13039-13058 | Msa1443960:intergenic | 30.0% | |
! | ACTCTTTTCAAAATTCCACA+TGG | - | tig0030624:14150-14169 | Msa1443960:intergenic | 30.0% |
GGAAACAGTAATTTAACAGA+AGG | - | tig0030624:14315-14334 | Msa1443960:intergenic | 30.0% | |
AAATTACTGTTTCCCATAAG+TGG | + | tig0030624:14321-14340 | Msa1443960:intron | 30.0% | |
ATGGAAAATTGACCACTTAT+GGG | - | tig0030624:14336-14355 | Msa1443960:intergenic | 30.0% | |
TATGTTTACCACTTTAATGC+AGG | + | tig0030624:14557-14576 | Msa1443960:intron | 30.0% | |
GGAAGAATCAATGTTTATCT+AGG | - | tig0030624:14641-14660 | Msa1443960:intergenic | 30.0% | |
CATTCCATTTGACACAAAAT+TGG | + | tig0030624:14674-14693 | Msa1443960:intron | 30.0% | |
! | AAAGAGCATATATCTGCAAA+AGG | - | tig0030624:14995-15014 | Msa1443960:intergenic | 30.0% |
!! | AGATATATGCTCTTTAAAGC+AGG | + | tig0030624:15000-15019 | Msa1443960:intron | 30.0% |
TAACTGATATTAGTTCCTCA+AGG | - | tig0030624:15077-15096 | Msa1443960:intergenic | 30.0% | |
!! | CAGTTATTTCTAAGCTATCA+AGG | + | tig0030624:15091-15110 | Msa1443960:CDS | 30.0% |
!! | GTTATTTCTAAGCTATCAAG+GGG | + | tig0030624:15093-15112 | Msa1443960:CDS | 30.0% |
ACATAGCTTATATACTCCAA+TGG | - | tig0030624:15129-15148 | Msa1443960:intergenic | 30.0% | |
ATTGGAGTATATAAGCTATG+TGG | + | tig0030624:15128-15147 | Msa1443960:CDS | 30.0% | |
TTGTAAGAAAATGAACCACT+TGG | - | tig0030624:15235-15254 | Msa1443960:intergenic | 30.0% | |
! | ATTTTCTTACAAACCCTCAT+TGG | + | tig0030624:15243-15262 | Msa1443960:intron | 30.0% |
TATGAATCCCCTATAAATAG+AGG | - | tig0030624:15389-15408 | Msa1443960:intergenic | 30.0% | |
GTATTAGTATCCATATGACA+TGG | - | tig0030624:15456-15475 | Msa1443960:intergenic | 30.0% | |
TATTATAGCAAGCGTAAAGA+CGG | + | tig0030624:15539-15558 | Msa1443960:intron | 30.0% | |
TGGTTCATTAAATTATGGTG+TGG | + | tig0030624:15801-15820 | Msa1443960:intron | 30.0% | |
GGTTCATTAAATTATGGTGT+GGG | + | tig0030624:15802-15821 | Msa1443960:intron | 30.0% | |
ATCTGTAGATATTCCTTCTA+AGG | + | tig0030624:16100-16119 | Msa1443960:intron | 30.0% | |
TCTGTAGATATTCCTTCTAA+GGG | + | tig0030624:16101-16120 | Msa1443960:intron | 30.0% | |
CTAGGAAGATCTATAATTCT+AGG | - | tig0030624:16156-16175 | Msa1443960:intergenic | 30.0% | |
CTAGAATTATAGATCTTCCT+AGG | + | tig0030624:16154-16173 | Msa1443960:intron | 30.0% | |
CCACACTATTGCATTTATAA+TGG | - | tig0030624:16211-16230 | Msa1443960:intergenic | 30.0% | |
CCATTATAAATGCAATAGTG+TGG | + | tig0030624:16208-16227 | Msa1443960:intron | 30.0% | |
TCTTACATGTTCAAACTCTA+CGG | + | tig0030624:16282-16301 | Msa1443960:intron | 30.0% | |
CTAAAAAATTGTATTGGAGG+AGG | - | tig0030624:16561-16580 | Msa1443960:intergenic | 30.0% | |
GGGGAACTAAAAAATTGTAT+TGG | - | tig0030624:16567-16586 | Msa1443960:intergenic | 30.0% | |
!!! | TTTTTTAGTTCCCCCAAATT+AGG | + | tig0030624:16573-16592 | Msa1443960:intron | 30.0% |
!!! | TTTTTAGTTCCCCCAAATTA+GGG | + | tig0030624:16574-16593 | Msa1443960:intron | 30.0% |
ATACAAAATCCCCCTAATTT+GGG | - | tig0030624:16588-16607 | Msa1443960:intergenic | 30.0% | |
AATACAAAATCCCCCTAATT+TGG | - | tig0030624:16589-16608 | Msa1443960:intergenic | 30.0% | |
ATAAAAAAGGAAGGAAGAAG+TGG | - | tig0030624:16665-16684 | Msa1443960:intergenic | 30.0% | |
! | TAAGGCTCTATTTGGATTTT+GGG | - | tig0030624:16727-16746 | Msa1443960:intergenic | 30.0% |
! | TTAAGGCTCTATTTGGATTT+TGG | - | tig0030624:16728-16747 | Msa1443960:intergenic | 30.0% |
ACAAACATTAAGGCTCTATT+TGG | - | tig0030624:16735-16754 | Msa1443960:intergenic | 30.0% | |
TCGATGTTGAACAAACATTA+AGG | - | tig0030624:16745-16764 | Msa1443960:intergenic | 30.0% | |
TATGCATTGTAATGGTAGAT+TGG | + | tig0030624:16809-16828 | Msa1443960:intron | 30.0% | |
! | ATTCCCCTTATTTATCATCT+GGG | + | tig0030624:17044-17063 | Msa1443960:CDS | 30.0% |
ATACCCAGATGATAAATAAG+GGG | - | tig0030624:17050-17069 | Msa1443960:intergenic | 30.0% | |
! | CACAATTCTTATCATTGACT+TGG | + | tig0030624:17463-17482 | Msa1443960:intron | 30.0% |
AAAAAAAAAGAGTTGCCAAG+AGG | - | tig0030624:17528-17547 | Msa1443960:intergenic | 30.0% | |
!!! | TCACAACATTTTTTTGGAAC+TGG | + | tig0030624:17627-17646 | Msa1443960:CDS | 30.0% |
CAGTCTAAATTTAAGAAACG+AGG | - | tig0030624:17990-18009 | Msa1443960:intergenic | 30.0% | |
TTTCATCATCAAAAGTGGAT+CGG | - | tig0030624:18030-18049 | Msa1443960:intergenic | 30.0% | |
ACATGTTTCATCATCAAAAG+TGG | - | tig0030624:18035-18054 | Msa1443960:intergenic | 30.0% | |
TGAATTGAGAAAAGCTAAAC+TGG | + | tig0030624:18098-18117 | Msa1443960:intron | 30.0% | |
!! | AAATCAGACTTTGAAGTATC+AGG | - | tig0030624:18177-18196 | Msa1443960:intergenic | 30.0% |
! | TTTTATCATGCTATCTTCAC+TGG | - | tig0030624:18236-18255 | Msa1443960:intergenic | 30.0% |
TGAAGATAGCATGATAAAAG+TGG | + | tig0030624:18237-18256 | Msa1443960:intron | 30.0% | |
TCATTAACTCTAACAAGAGA+TGG | + | tig0030624:18361-18380 | Msa1443960:intron | 30.0% | |
!! | TACATATTTTTGTTCAGAGC+CGG | + | tig0030624:18534-18553 | Msa1443960:intron | 30.0% |
AAGCTCAATAACTTCCATAT+TGG | - | tig0030624:18695-18714 | Msa1443960:intergenic | 30.0% | |
!! | AGATTTTGGTAGTTCGTTTT+CGG | + | tig0030624:18821-18840 | Msa1443960:intron | 30.0% |
GAATGAAAAAAGAGACAGTA+AGG | - | tig0030624:19136-19155 | Msa1443960:intergenic | 30.0% | |
TTACTAAAATTTGGGGGATA+GGG | - | tig0030624:19198-19217 | Msa1443960:intergenic | 30.0% | |
TTTAGTAAGAACTACTCTTG+AGG | + | tig0030624:19210-19229 | Msa1443960:intron | 30.0% | |
!!! | GCATTACCCTATTTTAATCA+AGG | + | tig0030624:19278-19297 | Msa1443960:intron | 30.0% |
TCCTGACCTTGATTAAAATA+GGG | - | tig0030624:19287-19306 | Msa1443960:intergenic | 30.0% | |
!! | CATTAGGTTGGACTATATAA+TGG | - | tig0030624:19389-19408 | Msa1443960:intergenic | 30.0% |
!! | TACGGGGATTTTAATCATTA+TGG | - | tig0030624:19440-19459 | Msa1443960:intergenic | 30.0% |
! | TTGTTTAAAGTTTCTCTACG+GGG | - | tig0030624:19456-19475 | Msa1443960:intergenic | 30.0% |
!!! | AGATACAACTGTTTTGAGTT+AGG | - | tig0030624:19531-19550 | Msa1443960:intergenic | 30.0% |
AAGAGAAGAAAGATGAAAAC+TGG | + | tig0030624:19566-19585 | Msa1443960:intron | 30.0% | |
AGAGAAGAAAGATGAAAACT+GGG | + | tig0030624:19567-19586 | Msa1443960:intron | 30.0% | |
TTAAATTCAAGTGTGGTTGT+TGG | + | tig0030624:19831-19850 | Msa1443960:intron | 30.0% | |
! | TTGGACTATTTAAAGTGCTA+AGG | + | tig0030624:19850-19869 | Msa1443960:intron | 30.0% |
! | TATTTAAAGTGCTAAGGACT+AGG | + | tig0030624:19856-19875 | Msa1443960:intron | 30.0% |
! | ATTTAAAGTGCTAAGGACTA+GGG | + | tig0030624:19857-19876 | Msa1443960:intron | 30.0% |
CAAAAACGGTAAAGAATAGA+GGG | + | tig0030624:19977-19996 | Msa1443960:intron | 30.0% | |
AGAATAGAGGGAAAAAATAG+AGG | + | tig0030624:19989-20008 | Msa1443960:intron | 30.0% | |
TTTCAATTATGCCTACAATG+TGG | - | tig0030624:20091-20110 | Msa1443960:intergenic | 30.0% | |
TGTAGGCATAATTGAAAGTT+TGG | + | tig0030624:20094-20113 | Msa1443960:intron | 30.0% | |
AAGTTAGAGATTCAGTCAAT+CGG | - | tig0030624:20162-20181 | Msa1443960:intergenic | 30.0% | |
ATGATCATTTGATACTTGCT+TGG | - | tig0030624:20307-20326 | Msa1443960:intergenic | 30.0% | |
! | TTCTCATAAATGGTGTCAAA+AGG | + | tig0030624:20743-20762 | Msa1443960:CDS | 30.0% |
AATATTCTCAGAAATGGCAT+AGG | - | tig0030624:20769-20788 | Msa1443960:intergenic | 30.0% | |
!! | GTTTTGGATTAAGTGATGTT+TGG | + | tig0030624:20830-20849 | Msa1443960:CDS | 30.0% |
ATTAAGTGATGTTTGGATTC+AGG | + | tig0030624:20837-20856 | Msa1443960:CDS | 30.0% | |
GGTGATGCATTCAATTAAAA+TGG | - | tig0030624:21112-21131 | Msa1443960:intergenic | 30.0% | |
! | AAACTTTTCTTCTACATTGG+AGG | - | tig0030624:21143-21162 | Msa1443960:intergenic | 30.0% |
! | AGAAGAAAAGTTTTCTTCCT+TGG | + | tig0030624:21150-21169 | Msa1443960:intron | 30.0% |
TATGATTCCAGATAGGATTT+AGG | + | tig0030624:21350-21369 | Msa1443960:intron | 30.0% | |
! | CGTTAAGAGGTTAATTTTGT+TGG | + | tig0030624:21417-21436 | Msa1443960:intron | 30.0% |
! | TAAGAGGTTAATTTTGTTGG+TGG | + | tig0030624:21420-21439 | Msa1443960:intron | 30.0% |
! | AAGAGGTTAATTTTGTTGGT+GGG | + | tig0030624:21421-21440 | Msa1443960:intron | 30.0% |
AACTGGTATTGTAGAAAATG+AGG | - | tig0030624:21608-21627 | Msa1443960:intergenic | 30.0% | |
! | TCATTTTCTACAATACCAGT+TGG | + | tig0030624:21607-21626 | Msa1443960:intron | 30.0% |
!! | GTTTTGAATCAAGCGAATTT+TGG | + | tig0030624:21654-21673 | Msa1443960:intron | 30.0% |
! | TGGAGTTGTGTAAGAATTTT+TGG | + | tig0030624:21674-21693 | Msa1443960:intron | 30.0% |
!! | AGTTGTGTAAGAATTTTTGG+TGG | + | tig0030624:21677-21696 | Msa1443960:intron | 30.0% |
!!! | GTTGTGTAAGAATTTTTGGT+GGG | + | tig0030624:21678-21697 | Msa1443960:intron | 30.0% |
AAAATAAGCAACAATTGGGA+GGG | + | tig0030624:21987-22006 | Msa1443960:intron | 30.0% | |
AATCAAGAATGAAGTCATGA+TGG | + | tig0030624:22033-22052 | Msa1443960:intron | 30.0% | |
!! | GAAGCATTTTGATAAATCCA+TGG | + | tig0030624:22085-22104 | Msa1443960:intron | 30.0% |
TTCTTTCAAGGAGTGAAAAA+CGG | - | tig0030624:22458-22477 | Msa1443960:intergenic | 30.0% | |
! | TAACAAAGCTAGTTCTTTCA+AGG | - | tig0030624:22470-22489 | Msa1443960:intergenic | 30.0% |
!! | GTTTTGGGTAAAATTATTGC+AGG | + | tig0030624:22518-22537 | Msa1443960:intron | 30.0% |
GATAAATCTGATACCAATGA+TGG | + | tig0030624:22705-22724 | Msa1443960:intron | 30.0% | |
! | AATATTTTCAATGTACCTGC+CGG | - | tig0030624:22752-22771 | Msa1443960:intergenic | 30.0% |
CTACAAATCAAATTAGACGA+GGG | - | tig0030624:22777-22796 | Msa1443960:intergenic | 30.0% | |
TCTACAAATCAAATTAGACG+AGG | - | tig0030624:22778-22797 | Msa1443960:intergenic | 30.0% | |
!! | TGATTTGTGTGATTTTGTCT+AGG | + | tig0030624:22844-22863 | Msa1443960:intron | 30.0% |
! | GATTTGTGTGATTTTGTCTA+GGG | + | tig0030624:22845-22864 | Msa1443960:intron | 30.0% |
CTGATTGATAAATAGCAACA+TGG | + | tig0030624:23079-23098 | Msa1443960:intron | 30.0% | |
TTGATAAATAGCAACATGGT+AGG | + | tig0030624:23083-23102 | Msa1443960:intron | 30.0% | |
GTTGCAAGTAAATTTGTATG+AGG | + | tig0030624:23114-23133 | Msa1443960:intron | 30.0% | |
AAGCCTAATTCAAATGTCTT+TGG | + | tig0030624:23347-23366 | Msa1443960:intron | 30.0% | |
AGTCCAAAGACATTTGAATT+AGG | - | tig0030624:23353-23372 | Msa1443960:intergenic | 30.0% | |
ATTCAAATGTCTTTGGACTT+TGG | + | tig0030624:23354-23373 | Msa1443960:intron | 30.0% | |
! | TTTCATATACACACCCTTTT+GGG | - | tig0030624:23395-23414 | Msa1443960:intergenic | 30.0% |
! | TTTTCATATACACACCCTTT+TGG | - | tig0030624:23396-23415 | Msa1443960:intergenic | 30.0% |
ATCCAAATCCAATCCAAATT+AGG | + | tig0030624:23422-23441 | Msa1443960:intron | 30.0% | |
ATGACAACAATTGTAAGCAA+AGG | - | tig0030624:23458-23477 | Msa1443960:intergenic | 30.0% | |
CGCTTAATTAACAGAATTTG+AGG | + | tig0030624:23568-23587 | Msa1443960:intron | 30.0% | |
TACAGCAACATACAGAATAT+AGG | + | tig0030624:23736-23755 | Msa1443960:intron | 30.0% | |
ATGAAAAATGACAATGCAGT+AGG | + | tig0030624:23809-23828 | Msa1443960:intron | 30.0% | |
TGAAAAATGACAATGCAGTA+GGG | + | tig0030624:23810-23829 | Msa1443960:intron | 30.0% | |
!!! | TTTTAAGTTACGTCCTTAGA+AGG | - | tig0030624:23900-23919 | Msa1443960:intergenic | 30.0% |
CGTAACTTAAAAGTGATGAA+TGG | + | tig0030624:23908-23927 | Msa1443960:intron | 30.0% | |
! | AGTTGGTTACATTTGTTAGA+GGG | - | tig0030624:23973-23992 | Msa1443960:intergenic | 30.0% |
! | ATTTTACTAAAAAGGGGAGT+TGG | - | tig0030624:23990-24009 | Msa1443960:intergenic | 30.0% |
!! | GCAGCTATTTTACTAAAAAG+GGG | - | tig0030624:23996-24015 | Msa1443960:intergenic | 30.0% |
ATATATTAGGTACAGGGTTT+GGG | - | tig0030624:24024-24043 | Msa1443960:intergenic | 30.0% | |
TATATATTAGGTACAGGGTT+TGG | - | tig0030624:24025-24044 | Msa1443960:intergenic | 30.0% | |
GAAGCTATATATTAGGTACA+GGG | - | tig0030624:24030-24049 | Msa1443960:intergenic | 30.0% | |
TCATCACGAAGCTATATATT+AGG | - | tig0030624:24037-24056 | Msa1443960:intergenic | 30.0% | |
ATTTGTCAAATCCAATTCAC+AGG | + | tig0030624:24277-24296 | Msa1443960:intron | 30.0% | |
CAGTGGATAGTTGAAATTAA+TGG | + | tig0030624:24345-24364 | Msa1443960:CDS | 30.0% | |
! | AAAGAATCTATATCTGGAGT+TGG | - | tig0030624:24375-24394 | Msa1443960:intergenic | 30.0% |
TTGTTAATGTGACAAAGGTA+CGG | + | tig0030624:24394-24413 | Msa1443960:intron | 30.0% | |
ACACATGTATATTCCATCTT+AGG | - | tig0030624:24476-24495 | Msa1443960:intergenic | 30.0% | |
AATATACATGTGTATGTGTG+TGG | + | tig0030624:24483-24502 | Msa1443960:intron | 30.0% | |
ATATACATGTGTATGTGTGT+GGG | + | tig0030624:24484-24503 | Msa1443960:intron | 30.0% | |
TTTGAATACACTACACTGAA+TGG | + | tig0030624:24520-24539 | Msa1443960:intron | 30.0% | |
! | ATTTACATTATTGGCCTACA+TGG | + | tig0030624:24911-24930 | Msa1443960:CDS | 30.0% |
! | TTTACATTATTGGCCTACAT+GGG | + | tig0030624:24912-24931 | Msa1443960:CDS | 30.0% |
! | AGTTATAAAGCAATCGATTC+AGG | + | tig0030624:25228-25247 | Msa1443960:three_prime_UTR | 30.0% |
TGCAACATTATTTAACCCAT+TGG | + | tig0030624:25276-25295 | Msa1443960:three_prime_UTR | 30.0% | |
! | ACTTCTCTTTGCCTTTTATT+TGG | + | tig0030624:25392-25411 | Msa1443960:three_prime_UTR | 30.0% |
TCATTCAATGGAAGATCCAT+CGG | + | tig0030624:7735-7754 | Msa1443960:exon | 35.0% | |
AATTTCCATGGATAAGTCGT+CGG | - | tig0030624:7806-7825 | Msa1443960:intergenic | 35.0% | |
!!! | GCTTTGGTTTTGAATTTTGC+AGG | + | tig0030624:8103-8122 | Msa1443960:intron | 35.0% |
TTACATGATAGTTCCACGTT+TGG | + | tig0030624:8374-8393 | Msa1443960:intron | 35.0% | |
TAGCATGTTACATTGCTCTT+GGG | - | tig0030624:8661-8680 | Msa1443960:intergenic | 35.0% | |
GGTGTGTAAATGACCAAAAT+GGG | + | tig0030624:8906-8925 | Msa1443960:intron | 35.0% | |
GTGTGTAAATGACCAAAATG+GGG | + | tig0030624:8907-8926 | Msa1443960:intron | 35.0% | |
! | TTTTAGTAATGGCCCCATTT+TGG | - | tig0030624:8922-8941 | Msa1443960:intergenic | 35.0% |
! | TTCTGCAGGTACATGATTTT+GGG | + | tig0030624:9580-9599 | Msa1443960:intron | 35.0% |
GGATTAGAAATCAGAGTTGT+TGG | + | tig0030624:9681-9700 | Msa1443960:CDS | 35.0% | |
AGAGTTGTTGGAAATGATAG+TGG | + | tig0030624:9693-9712 | Msa1443960:CDS | 35.0% | |
! | AAAATATGCAAGAGTGCAAC+AGG | - | tig0030624:9849-9868 | Msa1443960:intergenic | 35.0% |
! | TGCACTCTTGCATATTTTCT+TGG | + | tig0030624:9851-9870 | Msa1443960:intron | 35.0% |
! | GAGCATTTGATAGTTGTAGA+TGG | + | tig0030624:9915-9934 | Msa1443960:intron | 35.0% |
CTGTAAGTGTTCTCATACTT+TGG | + | tig0030624:10035-10054 | Msa1443960:intron | 35.0% | |
GGTCCATCTACATCAATAAA+GGG | - | tig0030624:10161-10180 | Msa1443960:intergenic | 35.0% | |
TGGTCCATCTACATCAATAA+AGG | - | tig0030624:10162-10181 | Msa1443960:intergenic | 35.0% | |
TTTATTGATGTAGATGGACC+AGG | + | tig0030624:10161-10180 | Msa1443960:intron | 35.0% | |
! | TTACTGCCAGGTTTCAATTT+TGG | + | tig0030624:10251-10270 | Msa1443960:intron | 35.0% |
TACTCTTGCTCGTTTAGATA+GGG | + | tig0030624:10278-10297 | Msa1443960:CDS | 35.0% | |
!!! | ACTATTTTTTGATGCAGGGA+TGG | + | tig0030624:10402-10421 | Msa1443960:intron | 35.0% |
!!! | CTATTTTTTGATGCAGGGAT+GGG | + | tig0030624:10403-10422 | Msa1443960:intron | 35.0% |
! | TTGGCATTGGACAAACTATA+AGG | - | tig0030624:10602-10621 | Msa1443960:intergenic | 35.0% |
TTTGTCCAATGCCAAATTGA+AGG | + | tig0030624:10607-10626 | Msa1443960:intron | 35.0% | |
! | AATATGGCTGGTTAAACAGA+AGG | + | tig0030624:10651-10670 | Msa1443960:intron | 35.0% |
! | ATATGGCTGGTTAAACAGAA+GGG | + | tig0030624:10652-10671 | Msa1443960:intron | 35.0% |
! | GCCAAGAAAATTAGCTTCAT+GGG | + | tig0030624:10697-10716 | Msa1443960:intron | 35.0% |
! | TCCCATGAAGCTAATTTTCT+TGG | - | tig0030624:10701-10720 | Msa1443960:intergenic | 35.0% |
! | ATCCGCATTCTTTTTACCTT+TGG | + | tig0030624:10941-10960 | Msa1443960:CDS | 35.0% |
!!! | GATTTACTTTTCAGGTTGTG+AGG | + | tig0030624:11082-11101 | Msa1443960:intron | 35.0% |
GGCATTAAGGTTTCTTCAAA+AGG | + | tig0030624:11104-11123 | Msa1443960:CDS | 35.0% | |
TGGTTATGTAATCGGATATC+GGG | + | tig0030624:11747-11766 | Msa1443960:intron | 35.0% | |
!! | AGCTGACTTTTCTCCATAAA+GGG | + | tig0030624:11794-11813 | Msa1443960:intron | 35.0% |
!! | GGTTCTAAATGTTTATAGGC+TGG | - | tig0030624:12122-12141 | Msa1443960:intergenic | 35.0% |
! | GCCTATAAACATTTAGAACC+GGG | + | tig0030624:12122-12141 | Msa1443960:CDS | 35.0% |
!! | ACCCGGTTCTAAATGTTTAT+AGG | - | tig0030624:12126-12145 | Msa1443960:intergenic | 35.0% |
CAATGGTGAAGTAAGTTTGT+TGG | + | tig0030624:12163-12182 | Msa1443960:intron | 35.0% | |
!! | GTGAAGTAAGTTTGTTGGAT+GGG | + | tig0030624:12168-12187 | Msa1443960:intron | 35.0% |
!!! | AAAATTTTTTGGAAGGGGAC+AGG | - | tig0030624:12198-12217 | Msa1443960:intergenic | 35.0% |
TCACTTTCAATTAGTAGGAG+CGG | + | tig0030624:12493-12512 | Msa1443960:intron | 35.0% | |
GCTTACGATGTACCTAATAT+AGG | + | tig0030624:12561-12580 | Msa1443960:intron | 35.0% | |
!!! | ATGACAAGGAGACTAGTTTT+TGG | + | tig0030624:12588-12607 | Msa1443960:intron | 35.0% |
! | TTTTTCCCATCTTCGATGAT+TGG | + | tig0030624:12763-12782 | Msa1443960:intron | 35.0% |
TGAAACCAATCATCGAAGAT+GGG | - | tig0030624:12771-12790 | Msa1443960:intergenic | 35.0% | |
TTGAAACCAATCATCGAAGA+TGG | - | tig0030624:12772-12791 | Msa1443960:intergenic | 35.0% | |
TTACTTTCATGCATTCCTTG+AGG | + | tig0030624:12795-12814 | Msa1443960:intron | 35.0% | |
ATTCCTTGAGGCTACAAAAA+AGG | + | tig0030624:12807-12826 | Msa1443960:intron | 35.0% | |
TTCCTTGAGGCTACAAAAAA+GGG | + | tig0030624:12808-12827 | Msa1443960:intron | 35.0% | |
TTGAACTCTGACATTATTGC+AGG | + | tig0030624:12865-12884 | Msa1443960:intron | 35.0% | |
CATTACTCAATTCCTGAAAC+TGG | + | tig0030624:12889-12908 | Msa1443960:CDS | 35.0% | |
GAATTACAAATTGAAAGGGG+TGG | + | tig0030624:12947-12966 | Msa1443960:CDS | 35.0% | |
!!! | GTGAGAGTTTTATTATGGCT+TGG | + | tig0030624:12995-13014 | Msa1443960:intron | 35.0% |
TGAGGTTAGGATTTCTTCAT+GGG | - | tig0030624:13183-13202 | Msa1443960:intergenic | 35.0% | |
ATGAGGTTAGGATTTCTTCA+TGG | - | tig0030624:13184-13203 | Msa1443960:intergenic | 35.0% | |
GTAGTAGACTTGAATGATCA+AGG | + | tig0030624:13306-13325 | Msa1443960:intron | 35.0% | |
ATATTTCCCTATTTCATGGG+TGG | - | tig0030624:13536-13555 | Msa1443960:intergenic | 35.0% | |
AATATTGCTAACCTGCTGAT+AGG | - | tig0030624:13790-13809 | Msa1443960:intergenic | 35.0% | |
! | ATACCTGTGAACTTTGTTGT+GGG | - | tig0030624:13953-13972 | Msa1443960:intergenic | 35.0% |
AATACCTGTGAACTTTGTTG+TGG | - | tig0030624:13954-13973 | Msa1443960:intergenic | 35.0% | |
GATGGAAAATTGACCACTTA+TGG | - | tig0030624:14337-14356 | Msa1443960:intergenic | 35.0% | |
!!! | TACCAGCTTGTTTTTTCTTG+TGG | + | tig0030624:14376-14395 | Msa1443960:intron | 35.0% |
AACCACAAGAAAAAACAAGC+TGG | - | tig0030624:14381-14400 | Msa1443960:intergenic | 35.0% | |
ACTACTGCAACATAGTTATC+TGG | + | tig0030624:14401-14420 | Msa1443960:intron | 35.0% | |
CTGGACTTGTAACTTTGTTA+TGG | + | tig0030624:14420-14439 | Msa1443960:intron | 35.0% | |
! | TGTTTTTCTCACTTGAACTC+CGG | + | tig0030624:14462-14481 | Msa1443960:intron | 35.0% |
AAACAAGACCACAGTGAAAT+CGG | - | tig0030624:14593-14612 | Msa1443960:intergenic | 35.0% | |
TTGTTTATGTGACAGAACCA+GGG | + | tig0030624:14607-14626 | Msa1443960:CDS | 35.0% | |
TGCAAAAGGTAATTGTCACA+TGG | - | tig0030624:14981-15000 | Msa1443960:intergenic | 35.0% | |
TTCTTAATTATTGCATGGCG+AGG | - | tig0030624:15030-15049 | Msa1443960:intergenic | 35.0% | |
TGAAGAAATATCTTGCCTTG+AGG | + | tig0030624:15059-15078 | Msa1443960:CDS | 35.0% | |
TTACACATTCCAACCAATGA+GGG | - | tig0030624:15259-15278 | Msa1443960:intergenic | 35.0% | |
CATGCATAAATAGGGAAATC+AGG | + | tig0030624:15411-15430 | Msa1443960:intron | 35.0% | |
GTCATATGGATACTAATACC+TGG | + | tig0030624:15457-15476 | Msa1443960:intron | 35.0% | |
GGGTATCTTAGATTATATCC+AGG | - | tig0030624:15478-15497 | Msa1443960:intergenic | 35.0% | |
ATTATAGCAAGCGTAAAGAC+GGG | + | tig0030624:15540-15559 | Msa1443960:intron | 35.0% | |
! | AGTTAGAAAAGGCACATAGA+TGG | - | tig0030624:15577-15596 | Msa1443960:intergenic | 35.0% |
CCAAAGTTAACTGTCAACTT+TGG | - | tig0030624:15892-15911 | Msa1443960:intergenic | 35.0% | |
CCAAAGTTGACAGTTAACTT+TGG | + | tig0030624:15889-15908 | Msa1443960:intron | 35.0% | |
AAGTTGACAGTTAACTTTGG+AGG | + | tig0030624:15892-15911 | Msa1443960:intron | 35.0% | |
!! | TTGGAGGTGTCATTATATCA+TGG | + | tig0030624:15908-15927 | Msa1443960:intron | 35.0% |
AAGTAGCTATTACCCTTAGA+AGG | - | tig0030624:16116-16135 | Msa1443960:intergenic | 35.0% | |
CATTGAATAAGCACTAACCT+AGG | - | tig0030624:16174-16193 | Msa1443960:intergenic | 35.0% | |
GTGGTTTCATTATAGACACA+CGG | + | tig0030624:16227-16246 | Msa1443960:intron | 35.0% | |
AATGTTTCTTAGGCTCTGTT+TGG | + | tig0030624:16327-16346 | Msa1443960:intron | 35.0% | |
ATGTTTCTTAGGCTCTGTTT+GGG | + | tig0030624:16328-16347 | Msa1443960:intron | 35.0% | |
!!! | TTTTAGTTCCCCCAAATTAG+GGG | + | tig0030624:16575-16594 | Msa1443960:intron | 35.0% |
TACAAAATCCCCCTAATTTG+GGG | - | tig0030624:16587-16606 | Msa1443960:intergenic | 35.0% | |
GGAGGGTTTATAAAAAAGGA+AGG | - | tig0030624:16674-16693 | Msa1443960:intergenic | 35.0% | |
!! | TTGGATTTTGGGAGTTTTGA+GGG | - | tig0030624:16716-16735 | Msa1443960:intergenic | 35.0% |
!! | TTTGGATTTTGGGAGTTTTG+AGG | - | tig0030624:16717-16736 | Msa1443960:intergenic | 35.0% |
! | TGTTTCATGACCTTGTTTGA+TGG | + | tig0030624:16909-16928 | Msa1443960:intron | 35.0% |
GATGATAAATAAGGGGAATC+AGG | - | tig0030624:17043-17062 | Msa1443960:intergenic | 35.0% | |
! | GATTCCCCTTATTTATCATC+TGG | + | tig0030624:17043-17062 | Msa1443960:CDS | 35.0% |
TCATCTGGGTATAAAGATGT+TGG | + | tig0030624:17058-17077 | Msa1443960:CDS | 35.0% | |
GTATAAAGATGTTGGAAGTC+TGG | + | tig0030624:17066-17085 | Msa1443960:CDS | 35.0% | |
!! | GTTGATGATTTATCAGCTGA+TGG | + | tig0030624:17259-17278 | Msa1443960:CDS | 35.0% |
!!! | TTTTTCTAGCTTGGTTTCCT+CGG | - | tig0030624:17314-17333 | Msa1443960:intergenic | 35.0% |
GAAACCAAGCTAGAAAAATC+AGG | + | tig0030624:17316-17335 | Msa1443960:CDS | 35.0% | |
AGGAGTCATTAAGAACCATA+GGG | - | tig0030624:17560-17579 | Msa1443960:intergenic | 35.0% | |
AAAAGATAGCAACACATCAG+AGG | - | tig0030624:17721-17740 | Msa1443960:intergenic | 35.0% | |
TAAGAAAGATTTACCTCTCC+AGG | - | tig0030624:17765-17784 | Msa1443960:intergenic | 35.0% | |
ATCATATGATCCATCTGCTT+TGG | + | tig0030624:17910-17929 | Msa1443960:CDS | 35.0% | |
TCATATGATCCATCTGCTTT+GGG | + | tig0030624:17911-17930 | Msa1443960:CDS | 35.0% | |
TTCATCATCAAAAGTGGATC+GGG | - | tig0030624:18029-18048 | Msa1443960:intergenic | 35.0% | |
!!! | CATTTTGACTTGATGGAAAG+AGG | - | tig0030624:18207-18226 | Msa1443960:intergenic | 35.0% |
CTCTTTCCATCAAGTCAAAA+TGG | + | tig0030624:18205-18224 | Msa1443960:intron | 35.0% | |
!!! | GTAAGACCATTTTGACTTGA+TGG | - | tig0030624:18214-18233 | Msa1443960:intergenic | 35.0% |
TTAACTCTAACAAGAGATGG+AGG | + | tig0030624:18364-18383 | Msa1443960:intron | 35.0% | |
TTAAATGTGTATGATGTGGG+AGG | + | tig0030624:18443-18462 | Msa1443960:intron | 35.0% | |
TAAATGTGTATGATGTGGGA+GGG | + | tig0030624:18444-18463 | Msa1443960:intron | 35.0% | |
AGGAGATTCTGTTTATCTTG+TGG | + | tig0030624:18567-18586 | Msa1443960:CDS | 35.0% | |
GGAGATTCTGTTTATCTTGT+GGG | + | tig0030624:18568-18587 | Msa1443960:CDS | 35.0% | |
GAAGTTATTGAGCTTGATAC+TGG | + | tig0030624:18700-18719 | Msa1443960:CDS | 35.0% | |
GAGCTTGATACTGGTAAATT+TGG | + | tig0030624:18709-18728 | Msa1443960:intron | 35.0% | |
!! | GATTTTGGTAGTTCGTTTTC+GGG | + | tig0030624:18822-18841 | Msa1443960:intron | 35.0% |
TAAGCACGCAAAAGATTAAC+TGG | - | tig0030624:18913-18932 | Msa1443960:intergenic | 35.0% | |
! | TAATCTTTTGCGTGCTTACA+TGG | + | tig0030624:18915-18934 | Msa1443960:intron | 35.0% |
! | TGGATCTGGACATTTTTCAT+TGG | + | tig0030624:18939-18958 | Msa1443960:intron | 35.0% |
! | GGATCTGGACATTTTTCATT+GGG | + | tig0030624:18940-18959 | Msa1443960:intron | 35.0% |
! | AAGGTGCTCATATTATGCTT+AGG | - | tig0030624:19088-19107 | Msa1443960:intergenic | 35.0% |
TACTAAAATTTGGGGGATAG+GGG | - | tig0030624:19197-19216 | Msa1443960:intergenic | 35.0% | |
CTTACTAAAATTTGGGGGAT+AGG | - | tig0030624:19199-19218 | Msa1443960:intergenic | 35.0% | |
!! | CTCTTGAGGTCTTATTCTAA+TGG | + | tig0030624:19224-19243 | Msa1443960:intron | 35.0% |
!!! | ACCCTATTTTAATCAAGGTC+AGG | + | tig0030624:19283-19302 | Msa1443960:intron | 35.0% |
GTCCTGACCTTGATTAAAAT+AGG | - | tig0030624:19288-19307 | Msa1443960:intergenic | 35.0% | |
TATAATTATCGACCGCTAGT+TGG | + | tig0030624:19351-19370 | Msa1443960:intron | 35.0% | |
AGTCTGCTTATTCATTAGGT+TGG | - | tig0030624:19401-19420 | Msa1443960:intergenic | 35.0% | |
CCAAAGTCTGCTTATTCATT+AGG | - | tig0030624:19405-19424 | Msa1443960:intergenic | 35.0% | |
CCTAATGAATAAGCAGACTT+TGG | + | tig0030624:19402-19421 | Msa1443960:intron | 35.0% | |
TAGAAAGTAAGAAGGAGCAA+TGG | - | tig0030624:19670-19689 | Msa1443960:intergenic | 35.0% | |
GCAAAAACGGTAAAGAATAG+AGG | + | tig0030624:19976-19995 | Msa1443960:intron | 35.0% | |
AGAGGGAAAAAATAGAGGAA+TGG | + | tig0030624:19994-20013 | Msa1443960:intron | 35.0% | |
GAGGGAAAAAATAGAGGAAT+GGG | + | tig0030624:19995-20014 | Msa1443960:intron | 35.0% | |
TATTATCGCTTCCTCTTATG+TGG | + | tig0030624:20239-20258 | Msa1443960:intron | 35.0% | |
AGAAGATCATCAATTCGTGA+GGG | + | tig0030624:20654-20673 | Msa1443960:CDS | 35.0% | |
TCCTATTTATGCAATAAGCC+AGG | + | tig0030624:20681-20700 | Msa1443960:CDS | 35.0% | |
ACCTGGCTTATTGCATAAAT+AGG | - | tig0030624:20685-20704 | Msa1443960:intergenic | 35.0% | |
AAGATCATATCTGGTGCAAA+TGG | + | tig0030624:20712-20731 | Msa1443960:CDS | 35.0% | |
AGATCATATCTGGTGCAAAT+GGG | + | tig0030624:20713-20732 | Msa1443960:CDS | 35.0% | |
TTGACACCATTTATGAGAAG+AGG | - | tig0030624:20742-20761 | Msa1443960:intergenic | 35.0% | |
ACATTCCATAAGACTGTTAG+AGG | - | tig0030624:21028-21047 | Msa1443960:intergenic | 35.0% | |
! | CTACGAATCTAGGATCATTA+AGG | - | tig0030624:21085-21104 | Msa1443960:intergenic | 35.0% |
AAATGGAAAGCTACGAATCT+AGG | - | tig0030624:21095-21114 | Msa1443960:intergenic | 35.0% | |
! | GAAAAGTTTTCTTCCTTGGA+TGG | + | tig0030624:21154-21173 | Msa1443960:intron | 35.0% |
! | GCTTTTATATCAACCATCCA+AGG | - | tig0030624:21170-21189 | Msa1443960:intergenic | 35.0% |
!! | GGTTGATATAAAAGCCCTTT+TGG | + | tig0030624:21175-21194 | Msa1443960:intron | 35.0% |
CTCTACATATGATTCCAGAT+AGG | + | tig0030624:21343-21362 | Msa1443960:intron | 35.0% | |
ACAACCTACCAATTTCTCAA+AGG | - | tig0030624:21389-21408 | Msa1443960:intergenic | 35.0% | |
! | TATAGGCAGCATGTCTTATT+GGG | - | tig0030624:21464-21483 | Msa1443960:intergenic | 35.0% |
TTATAGGCAGCATGTCTTAT+TGG | - | tig0030624:21465-21484 | Msa1443960:intergenic | 35.0% | |
CAACAGTCCTCTCTATTTAT+AGG | - | tig0030624:21481-21500 | Msa1443960:intergenic | 35.0% | |
CTATAAATAGAGAGGACTGT+TGG | + | tig0030624:21479-21498 | Msa1443960:intron | 35.0% | |
! | ACCAGTTGGTTTCTATCAAT+TGG | + | tig0030624:21621-21640 | Msa1443960:intron | 35.0% |
ACCAATTGATAGAAACCAAC+TGG | - | tig0030624:21625-21644 | Msa1443960:intergenic | 35.0% | |
!!! | AAGAATTTTTGGTGGGAAGA+TGG | + | tig0030624:21685-21704 | Msa1443960:intron | 35.0% |
ACCAAATCATGGAATCAACT+CGG | - | tig0030624:21714-21733 | Msa1443960:intergenic | 35.0% | |
AGCCTACTTGTGACTTATAT+AGG | + | tig0030624:21742-21761 | Msa1443960:intron | 35.0% | |
AGCCTATATAAGTCACAAGT+AGG | - | tig0030624:21747-21766 | Msa1443960:intergenic | 35.0% | |
! | ATAGGCTGAGCAATATTTTG+AGG | + | tig0030624:21760-21779 | Msa1443960:intron | 35.0% |
!! | TAGGCTGAGCAATATTTTGA+GGG | + | tig0030624:21761-21780 | Msa1443960:intron | 35.0% |
TGCATGAAGAGATGAAACTA+TGG | + | tig0030624:21792-21811 | Msa1443960:intron | 35.0% | |
ATGAAGAGATGAAACTATGG+TGG | + | tig0030624:21795-21814 | Msa1443960:intron | 35.0% | |
TGAAGAGATGAAACTATGGT+GGG | + | tig0030624:21796-21815 | Msa1443960:intron | 35.0% | |
TTTGAAAAACTCCACCAAGA+AGG | - | tig0030624:21890-21909 | Msa1443960:intergenic | 35.0% | |
!! | TTCTTGGTGGAGTTTTTCAA+AGG | + | tig0030624:21889-21908 | Msa1443960:intron | 35.0% |
TATATTCCAGCCTGATGTTT+GGG | + | tig0030624:21922-21941 | Msa1443960:intron | 35.0% | |
GAAAATAAGCAACAATTGGG+AGG | + | tig0030624:21986-22005 | Msa1443960:intron | 35.0% | |
! | AAAATGCTTCTTTTCCCATG+TGG | - | tig0030624:22075-22094 | Msa1443960:intergenic | 35.0% |
! | TTATTGGTAGCAATTCTCCA+TGG | - | tig0030624:22105-22124 | Msa1443960:intergenic | 35.0% |
TGTTTAAGAGCAATTCTCCA+AGG | - | tig0030624:22165-22184 | Msa1443960:intergenic | 35.0% | |
GAATTGCTCTTAAACAGAGA+TGG | + | tig0030624:22169-22188 | Msa1443960:intron | 35.0% | |
AGAATTACCACGCAAGAAAT+AGG | + | tig0030624:22220-22239 | Msa1443960:intron | 35.0% | |
GAATTACCACGCAAGAAATA+GGG | + | tig0030624:22221-22240 | Msa1443960:intron | 35.0% | |
!! | AGAGGTATTGAGTGGATATT+GGG | - | tig0030624:22300-22319 | Msa1443960:intergenic | 35.0% |
TTGTCAAGAAAGACCCAATA+AGG | + | tig0030624:22544-22563 | Msa1443960:CDS | 35.0% | |
TTTGCGTGTTAAAGGTTGTT+TGG | + | tig0030624:22575-22594 | Msa1443960:intron | 35.0% | |
! | AGCTTCAGATGACTATTTTC+CGG | + | tig0030624:22730-22749 | Msa1443960:intron | 35.0% |
GCACAACTCGTACAATTAAT+TGG | + | tig0030624:22915-22934 | Msa1443960:CDS | 35.0% | |
ACTCGTACAATTAATTGGTG+TGG | + | tig0030624:22920-22939 | Msa1443960:CDS | 35.0% | |
GACATTTGAATTAGGCTTGT+AGG | - | tig0030624:23345-23364 | Msa1443960:intergenic | 35.0% | |
! | TTCATATACACACCCTTTTG+GGG | - | tig0030624:23394-23413 | Msa1443960:intergenic | 35.0% |
TTGTAAGCAAAGGATATCAG+AGG | - | tig0030624:23448-23467 | Msa1443960:intergenic | 35.0% | |
ATGTGATTGACCATTGATCT+CGG | + | tig0030624:23489-23508 | Msa1443960:intron | 35.0% | |
! | GTTAATTAAGCGTGTTGATC+TGG | - | tig0030624:23560-23579 | Msa1443960:intergenic | 35.0% |
ATTAACAGAATTTGAGGACC+AGG | + | tig0030624:23574-23593 | Msa1443960:intron | 35.0% | |
! | TGCAATGGAGAGTTAGTTTA+TGG | + | tig0030624:23661-23680 | Msa1443960:intron | 35.0% |
TGACAGTTATACGAAGGATT+AGG | - | tig0030624:23947-23966 | Msa1443960:intergenic | 35.0% | |
! | GTTGGTTACATTTGTTAGAG+GGG | - | tig0030624:23972-23991 | Msa1443960:intergenic | 35.0% |
! | GAGTTGGTTACATTTGTTAG+AGG | - | tig0030624:23974-23993 | Msa1443960:intergenic | 35.0% |
CGAAGCTATATATTAGGTAC+AGG | - | tig0030624:24031-24050 | Msa1443960:intergenic | 35.0% | |
TACAGACCATATCTATGTAC+AGG | - | tig0030624:24318-24337 | Msa1443960:intergenic | 35.0% | |
CCATCTTAGGAAGAAAAGAA+AGG | - | tig0030624:24463-24482 | Msa1443960:intergenic | 35.0% | |
! | CCTTTCTTTTCTTCCTAAGA+TGG | + | tig0030624:24460-24479 | Msa1443960:intron | 35.0% |
ACTGAATGGCATATGTACAT+GGG | + | tig0030624:24534-24553 | Msa1443960:intron | 35.0% | |
ATTATTTCACGAATGTTGGC+AGG | + | tig0030624:24810-24829 | Msa1443960:intron | 35.0% | |
! | TAGAGCATGGAGAATTTGTT+CGG | + | tig0030624:24836-24855 | Msa1443960:CDS | 35.0% |
TTAAACCTCAATTCCCATGT+AGG | - | tig0030624:24928-24947 | Msa1443960:intergenic | 35.0% | |
TTAATCCAGACACTGGAATT+TGG | + | tig0030624:24944-24963 | Msa1443960:CDS | 35.0% | |
TTGGCATCGTAATGTAATCA+AGG | + | tig0030624:24963-24982 | Msa1443960:CDS | 35.0% | |
TGAATGAGCAGAGTATAGTA+TGG | + | tig0030624:25006-25025 | Msa1443960:exon | 35.0% | |
CAAAGGAACAAACACAAATC+TGG | + | tig0030624:25054-25073 | Msa1443960:three_prime_UTR | 35.0% | |
!! | AGATTTTTGTTTGCTGAACC+TGG | - | tig0030624:25091-25110 | Msa1443960:intergenic | 35.0% |
AACTTGTCATGTGTCAATCA+TGG | - | tig0030624:25212-25231 | Msa1443960:intergenic | 35.0% | |
GAAGTGTGTGTTGTCAACTA+TGG | - | tig0030624:7657-7676 | Msa1443960:intergenic | 40.0% | |
AAACGGTGGATCAATTTCCA+TGG | - | tig0030624:7818-7837 | Msa1443960:intergenic | 40.0% | |
ATCAACGACAAAACCAGTAG+CGG | - | tig0030624:7962-7981 | Msa1443960:intergenic | 40.0% | |
! | TTTGTCGTTGATAAACGACG+TGG | + | tig0030624:7970-7989 | Msa1443960:CDS | 40.0% |
AACATAGCTTCAGCAACAAC+AGG | - | tig0030624:8130-8149 | Msa1443960:intergenic | 40.0% | |
TCTCTATATATCGGATGCAC+TGG | - | tig0030624:8172-8191 | Msa1443960:intergenic | 40.0% | |
! | AGGAAAAGAGCATGATGAGA+GGG | - | tig0030624:8274-8293 | Msa1443960:intergenic | 40.0% |
CTAGCATGTTACATTGCTCT+TGG | - | tig0030624:8662-8681 | Msa1443960:intergenic | 40.0% | |
CACACGCTGCAAATTATGTT+TGG | - | tig0030624:8734-8753 | Msa1443960:intergenic | 40.0% | |
! | CATAATTTGCAGCGTGTGTT+TGG | + | tig0030624:8736-8755 | Msa1443960:intron | 40.0% |
GGGTGTGTAAATGACCAAAA+TGG | + | tig0030624:8905-8924 | Msa1443960:intron | 40.0% | |
ATGGGGCCATTACTAAAAGA+TGG | + | tig0030624:8924-8943 | Msa1443960:intron | 40.0% | |
! | GCATGAATTTGGAGCTTTCA+CGG | - | tig0030624:9081-9100 | Msa1443960:intergenic | 40.0% |
GCTAATTGATACACTTCTGC+AGG | + | tig0030624:9566-9585 | Msa1443960:intron | 40.0% | |
! | CTTCTGCAGGTACATGATTT+TGG | + | tig0030624:9579-9598 | Msa1443960:intron | 40.0% |
!! | TGGAAATGATAGTGGTGAGA+AGG | + | tig0030624:9701-9720 | Msa1443960:CDS | 40.0% |
! | CACATCTCTGATTTTGTCTC+TGG | + | tig0030624:9747-9766 | Msa1443960:intron | 40.0% |
AATGCTCCAGAACTCAACTT+GGG | - | tig0030624:9902-9921 | Msa1443960:intergenic | 40.0% | |
AAATGCTCCAGAACTCAACT+TGG | - | tig0030624:9903-9922 | Msa1443960:intergenic | 40.0% | |
AGGGTAAATACTAGAAGTCC+TGG | - | tig0030624:10182-10201 | Msa1443960:intergenic | 40.0% | |
! | ATCTAAACGAGCAAGAGTAC+CGG | - | tig0030624:10277-10296 | Msa1443960:intergenic | 40.0% |
GTACTCTTGCTCGTTTAGAT+AGG | + | tig0030624:10277-10296 | Msa1443960:CDS | 40.0% | |
! | AAAATCCAACCTGCTCTGAA+AGG | - | tig0030624:10373-10392 | Msa1443960:intergenic | 40.0% |
AAGAGCCTTCAATTTGGCAT+TGG | - | tig0030624:10615-10634 | Msa1443960:intergenic | 40.0% | |
! | TATGGCTGGTTAAACAGAAG+GGG | + | tig0030624:10653-10672 | Msa1443960:intron | 40.0% |
! | GGCCAAGAAAATTAGCTTCA+TGG | + | tig0030624:10696-10715 | Msa1443960:intron | 40.0% |
! | TTTGATTTACAGGCAGCATC+TGG | + | tig0030624:10831-10850 | Msa1443960:intron | 40.0% |
TTGATTTACAGGCAGCATCT+GGG | + | tig0030624:10832-10851 | Msa1443960:intron | 40.0% | |
! | TATTGAAGGAGAAGCACGAT+TGG | + | tig0030624:11016-11035 | Msa1443960:intron | 40.0% |
! | ATTGAAGGAGAAGCACGATT+GGG | + | tig0030624:11017-11036 | Msa1443960:intron | 40.0% |
!! | CAGCTGACTTTTCTCCATAA+AGG | + | tig0030624:11793-11812 | Msa1443960:intron | 40.0% |
AATGCAGCGTAAATGATGCA+GGG | - | tig0030624:11933-11952 | Msa1443960:intergenic | 40.0% | |
AAATGCAGCGTAAATGATGC+AGG | - | tig0030624:11934-11953 | Msa1443960:intergenic | 40.0% | |
AACAAGCATTCCAGTTTCAC+TGG | - | tig0030624:11989-12008 | Msa1443960:intergenic | 40.0% | |
! | TGAAACTGGAATGCTTGTTG+TGG | + | tig0030624:11990-12009 | Msa1443960:CDS | 40.0% |
!! | CTTTGATTTGTTTAGGTGCC+AGG | + | tig0030624:12092-12111 | Msa1443960:intron | 40.0% |
AACTTACTTCACCATTGACG+CGG | - | tig0030624:12160-12179 | Msa1443960:intergenic | 40.0% | |
!! | GGTGAAGTAAGTTTGTTGGA+TGG | + | tig0030624:12167-12186 | Msa1443960:intron | 40.0% |
TACATCGTAAGCAGCAGTTT+GGG | - | tig0030624:12553-12572 | Msa1443960:intergenic | 40.0% | |
TTTCACGGTTCTTGTTCTGA+TGG | + | tig0030624:12834-12853 | Msa1443960:intron | 40.0% | |
CAAGTATAGTCTCCAGTTTC+AGG | - | tig0030624:12904-12923 | Msa1443960:intergenic | 40.0% | |
TTTAGCTGACCCCACTTAAT+GGG | + | tig0030624:13055-13074 | Msa1443960:intron | 40.0% | |
! | AAGCCTTATCCCATTAAGTG+GGG | - | tig0030624:13067-13086 | Msa1443960:intergenic | 40.0% |
! | CAAGCCTTATCCCATTAAGT+GGG | - | tig0030624:13068-13087 | Msa1443960:intergenic | 40.0% |
AGGTTAGGATTTCTTCATGG+GGG | - | tig0030624:13181-13200 | Msa1443960:intergenic | 40.0% | |
GAGGTTAGGATTTCTTCATG+GGG | - | tig0030624:13182-13201 | Msa1443960:intergenic | 40.0% | |
GCGAGTGTAAGAACTACAAA+TGG | - | tig0030624:13236-13255 | Msa1443960:intergenic | 40.0% | |
! | CTGTATTTTCAGAGCTTCTC+AGG | - | tig0030624:13281-13300 | Msa1443960:intergenic | 40.0% |
TGACGTGATCAATCATCACA+TGG | + | tig0030624:13456-13475 | Msa1443960:intron | 40.0% | |
! | TCAATCATCACATGGTGATG+TGG | + | tig0030624:13464-13483 | Msa1443960:intron | 40.0% |
TCATTTGAATAGGCAAACGC+AGG | - | tig0030624:13885-13904 | Msa1443960:intergenic | 40.0% | |
! | TACCTGTGAACTTTGTTGTG+GGG | - | tig0030624:13952-13971 | Msa1443960:intergenic | 40.0% |
AAGAGCAACAGAAGCAACTT+GGG | - | tig0030624:14507-14526 | Msa1443960:intergenic | 40.0% | |
ACAGTGAAATCGGAAGTTTC+TGG | - | tig0030624:14583-14602 | Msa1443960:intergenic | 40.0% | |
AGAAACTTCCGATTTCACTG+TGG | + | tig0030624:14582-14601 | Msa1443960:CDS | 40.0% | |
CTTGTTTATGTGACAGAACC+AGG | + | tig0030624:14606-14625 | Msa1443960:CDS | 40.0% | |
TTATCTAGGTATGCATACCC+TGG | - | tig0030624:14627-14646 | Msa1443960:intergenic | 40.0% | |
! | TATAACCAGTACTGGGTTAG+TGG | + | tig0030624:14733-14752 | Msa1443960:intron | 40.0% |
GTTATGACTTAGTGATGCTC+CGG | + | tig0030624:14768-14787 | Msa1443960:intron | 40.0% | |
! | TCACTTGATAGTCATGCACA+AGG | + | tig0030624:14887-14906 | Msa1443960:intron | 40.0% |
! | CACTTGATAGTCATGCACAA+GGG | + | tig0030624:14888-14907 | Msa1443960:intron | 40.0% |
TCTTACAAACCCTCATTGGT+TGG | + | tig0030624:15247-15266 | Msa1443960:intron | 40.0% | |
CTTACACATTCCAACCAATG+AGG | - | tig0030624:15260-15279 | Msa1443960:intergenic | 40.0% | |
TACATGTTCAAACTCTACGG+TGG | + | tig0030624:16285-16304 | Msa1443960:intron | 40.0% | |
!! | TTTTGGAGGGATGAGATTAG+AGG | + | tig0030624:16377-16396 | Msa1443960:intron | 40.0% |
! | TTTAGTTCCCCCAAATTAGG+GGG | + | tig0030624:16576-16595 | Msa1443960:intron | 40.0% |
ACAAAATCCCCCTAATTTGG+GGG | - | tig0030624:16586-16605 | Msa1443960:intergenic | 40.0% | |
AGAATGGAGAGATATGAGAG+TGG | - | tig0030624:16640-16659 | Msa1443960:intergenic | 40.0% | |
GAAGGAAGAAGTGGAAAGAA+TGG | - | tig0030624:16656-16675 | Msa1443960:intergenic | 40.0% | |
GAGGGGAGGGTTTATAAAAA+AGG | - | tig0030624:16678-16697 | Msa1443960:intergenic | 40.0% | |
!!! | TGGATTTTGGGAGTTTTGAG+GGG | - | tig0030624:16715-16734 | Msa1443960:intergenic | 40.0% |
CTTTCATGATCCAAGTAGTG+TGG | + | tig0030624:16848-16867 | Msa1443960:intron | 40.0% | |
TGTTCACCAGTCAAAGAACT+TGG | - | tig0030624:17100-17119 | Msa1443960:intergenic | 40.0% | |
TCGTGAGATACACACTCTAA+AGG | - | tig0030624:17205-17224 | Msa1443960:intergenic | 40.0% | |
CTGATGGGATAGTCAAGAAA+CGG | + | tig0030624:17233-17252 | Msa1443960:CDS | 40.0% | |
!!! | TTTTCTAGCTTGGTTTCCTC+GGG | - | tig0030624:17313-17332 | Msa1443960:intergenic | 40.0% |
CATTAACCCATCATCTGGTA+AGG | - | tig0030624:17344-17363 | Msa1443960:intergenic | 40.0% | |
!! | CTTACCAGATGATGGGTTAA+TGG | + | tig0030624:17342-17361 | Msa1443960:CDS | 40.0% |
TAGTCCATTAACCCATCATC+TGG | - | tig0030624:17349-17368 | Msa1443960:intergenic | 40.0% | |
!! | GATGGGTTAATGGACTATCA+AGG | + | tig0030624:17352-17371 | Msa1443960:CDS | 40.0% |
GTCTACTCTTGTGATGTTTG+AGG | + | tig0030624:17423-17442 | Msa1443960:CDS | 40.0% | |
CAGACATTGAAATGCTACAG+TGG | - | tig0030624:17497-17516 | Msa1443960:intergenic | 40.0% | |
ATGTCTGTATCCATTCCTCT+TGG | + | tig0030624:17510-17529 | Msa1443960:intron | 40.0% | |
AAAAGAGTTGCCAAGAGGAA+TGG | - | tig0030624:17523-17542 | Msa1443960:intergenic | 40.0% | |
CAGGAGTCATTAAGAACCAT+AGG | - | tig0030624:17561-17580 | Msa1443960:intergenic | 40.0% | |
TCTTAATGACTCCTGTCTTC+AGG | + | tig0030624:17566-17585 | Msa1443960:intron | 40.0% | |
ACACCATCAAGCATACAAGA+TGG | - | tig0030624:17603-17622 | Msa1443960:intergenic | 40.0% | |
AGGACAGACTTTCTTTAGCT+TGG | + | tig0030624:17828-17847 | Msa1443960:intron | 40.0% | |
!! | CTTGGTGTCTTCTTTCTTCA+TGG | + | tig0030624:17846-17865 | Msa1443960:intron | 40.0% |
! | ACGAGAGCATAATTGTGAAC+AGG | - | tig0030624:17890-17909 | Msa1443960:intergenic | 40.0% |
! | GTGTTGAAGTTGATTGCTTC+TGG | + | tig0030624:18330-18349 | Msa1443960:CDS | 40.0% |
ATTTCCTAGAGGTTGCTTGA+AGG | - | tig0030624:18606-18625 | Msa1443960:intergenic | 40.0% | |
! | GGTAACAACTGATTTCCTAG+AGG | - | tig0030624:18617-18636 | Msa1443960:intergenic | 40.0% |
! | ATTTAAAGCAGCGCAAGGAT+TGG | - | tig0030624:18638-18657 | Msa1443960:intergenic | 40.0% |
! | CCTATATTTAAAGCAGCGCA+AGG | - | tig0030624:18643-18662 | Msa1443960:intergenic | 40.0% |
! | CCTTGCGCTGCTTTAAATAT+AGG | + | tig0030624:18640-18659 | Msa1443960:CDS | 40.0% |
TGCTAACAGATGAACAAGGA+AGG | + | tig0030624:18847-18866 | Msa1443960:CDS | 40.0% | |
GCTAACAGATGAACAAGGAA+GGG | + | tig0030624:18848-18867 | Msa1443960:CDS | 40.0% | |
TCGAGTTCAATTCCAACTAG+CGG | - | tig0030624:19366-19385 | Msa1443960:intergenic | 40.0% | |
TACTTCAAAAGGCTACCTGA+TGG | + | tig0030624:19619-19638 | Msa1443960:intron | 40.0% | |
GCAATGGCTTATAGACTTCA+AGG | - | tig0030624:19654-19673 | Msa1443960:intergenic | 40.0% | |
!!! | AATCTTGTTTTGGTGGCGTT+TGG | + | tig0030624:20026-20045 | Msa1443960:intron | 40.0% |
TAAAGACCACACCACATAAG+AGG | - | tig0030624:20253-20272 | Msa1443960:intergenic | 40.0% | |
CTGTTCCAGCTTAAATTCAG+TGG | + | tig0030624:20622-20641 | Msa1443960:intron | 40.0% | |
TACTGCCACTGAATTTAAGC+TGG | - | tig0030624:20630-20649 | Msa1443960:intergenic | 40.0% | |
CAGAAGATCATCAATTCGTG+AGG | + | tig0030624:20653-20672 | Msa1443960:CDS | 40.0% | |
GAAGATCATCAATTCGTGAG+GGG | + | tig0030624:20655-20674 | Msa1443960:CDS | 40.0% | |
AAGATCATCAATTCGTGAGG+GGG | + | tig0030624:20656-20675 | Msa1443960:CDS | 40.0% | |
TTATGCAATAAGCCAGGTTC+TGG | + | tig0030624:20687-20706 | Msa1443960:CDS | 40.0% | |
ATATGATCTTGTCCAGAACC+TGG | - | tig0030624:20702-20721 | Msa1443960:intergenic | 40.0% | |
! | GTTCTGGACAAGATCATATC+TGG | + | tig0030624:20703-20722 | Msa1443960:CDS | 40.0% |
! | CGAGCCTTTGAAAGTAATGT+TGG | - | tig0030624:20808-20827 | Msa1443960:intergenic | 40.0% |
AGATGCCTCTAACAGTCTTA+TGG | + | tig0030624:21020-21039 | Msa1443960:intron | 40.0% | |
GTCTTATGGAATGTCTCCTT+TGG | + | tig0030624:21034-21053 | Msa1443960:intron | 40.0% | |
! | TCTACATTGGAGGCATACTA+CGG | - | tig0030624:21133-21152 | Msa1443960:intergenic | 40.0% |
ATTGTCGCCAATTACCTTTG+CGG | + | tig0030624:21239-21258 | Msa1443960:intron | 40.0% | |
AAGCAATCCGCAAAGGTAAT+TGG | - | tig0030624:21249-21268 | Msa1443960:intergenic | 40.0% | |
GTAATCTAAGCAATCCGCAA+AGG | - | tig0030624:21256-21275 | Msa1443960:intergenic | 40.0% | |
CCAATTTCTCAAAGGCCAAT+CGG | - | tig0030624:21381-21400 | Msa1443960:intergenic | 40.0% | |
! | TTGGCCTTTGAGAAATTGGT+AGG | + | tig0030624:21382-21401 | Msa1443960:intron | 40.0% |
GTTGTTCTGTTACCGTTAAG+AGG | + | tig0030624:21404-21423 | Msa1443960:intron | 40.0% | |
CATGCTGCCTATAAATAGAG+AGG | + | tig0030624:21471-21490 | Msa1443960:intron | 40.0% | |
ATTAGTGAGTTATGGCCTTC+TGG | + | tig0030624:21522-21541 | Msa1443960:intron | 40.0% | |
GTCTAACTACCAATACCAGA+AGG | - | tig0030624:21540-21559 | Msa1443960:intergenic | 40.0% | |
!! | TCTGGTATTGGTAGTTAGAC+AGG | + | tig0030624:21540-21559 | Msa1443960:intron | 40.0% |
AGAAAATGAGGAATACCTCC+CGG | - | tig0030624:21596-21615 | Msa1443960:intergenic | 40.0% | |
! | GAGTTGATTCCATGATTTGG+TGG | + | tig0030624:21713-21732 | Msa1443960:intron | 40.0% |
!! | TGATTCCATGATTTGGTGGA+AGG | + | tig0030624:21717-21736 | Msa1443960:intron | 40.0% |
TACATTTGCATTGAGACGAG+AGG | + | tig0030624:21823-21842 | Msa1443960:intron | 40.0% | |
TGAGCATTCCAAATCCTTCT+TGG | + | tig0030624:21873-21892 | Msa1443960:intron | 40.0% | |
AAACTCCACCAAGAAGGATT+TGG | - | tig0030624:21884-21903 | Msa1443960:intergenic | 40.0% | |
AGGCTGGAATATACTGAGAA+TGG | - | tig0030624:21915-21934 | Msa1443960:intergenic | 40.0% | |
GTATATTCCAGCCTGATGTT+TGG | + | tig0030624:21921-21940 | Msa1443960:intron | 40.0% | |
TTAAACGAGTCCCAAACATC+AGG | - | tig0030624:21935-21954 | Msa1443960:intergenic | 40.0% | |
CAAGAATGAAGTCATGATGG+TGG | + | tig0030624:22036-22055 | Msa1443960:intron | 40.0% | |
AAATAGGGAATGCAAAGCCA+CGG | + | tig0030624:22236-22255 | Msa1443960:intron | 40.0% | |
TCAAAACTTGGTAGAAACCG+TGG | - | tig0030624:22256-22275 | Msa1443960:intergenic | 40.0% | |
GGGAACAATCTCTCAAAACT+TGG | - | tig0030624:22268-22287 | Msa1443960:intergenic | 40.0% | |
GTATTGAGTGGATATTGGGT+GGG | - | tig0030624:22296-22315 | Msa1443960:intergenic | 40.0% | |
!! | CAGAGGTATTGAGTGGATAT+TGG | - | tig0030624:22301-22320 | Msa1443960:intergenic | 40.0% |
!! | TGGTTATCAGAGGTATTGAG+TGG | - | tig0030624:22308-22327 | Msa1443960:intergenic | 40.0% |
! | ATCAAAGGCTGAGCATCTTT+TGG | + | tig0030624:22602-22621 | Msa1443960:intron | 40.0% |
! | GGCAAGCATTTTCAATGTCA+TGG | - | tig0030624:22677-22696 | Msa1443960:intergenic | 40.0% |
TTCTTGTGGGAACAGATGTT+AGG | + | tig0030624:22882-22901 | Msa1443960:CDS | 40.0% | |
TCTTGTGGGAACAGATGTTA+GGG | + | tig0030624:22883-22902 | Msa1443960:CDS | 40.0% | |
ACAGATGTTAGGGATGGAAA+TGG | + | tig0030624:22893-22912 | Msa1443960:CDS | 40.0% | |
TTGGTGTGGTTGTATAGTTC+AGG | + | tig0030624:22934-22953 | Msa1443960:CDS | 40.0% | |
TCTTGGATTTCTTCCTGAAG+AGG | + | tig0030624:22979-22998 | Msa1443960:CDS | 40.0% | |
CTTGGATTTCTTCCTGAAGA+GGG | + | tig0030624:22980-22999 | Msa1443960:CDS | 40.0% | |
GGGTGTGTATATGAAAACAG+AGG | + | tig0030624:23399-23418 | Msa1443960:intron | 40.0% | |
! | GGCCTAATTTGGATTGGATT+TGG | - | tig0030624:23427-23446 | Msa1443960:intergenic | 40.0% |
ATCAGAGGCCTAATTTGGAT+TGG | - | tig0030624:23433-23452 | Msa1443960:intergenic | 40.0% | |
AGGATATCAGAGGCCTAATT+TGG | - | tig0030624:23438-23457 | Msa1443960:intergenic | 40.0% | |
! | AATTAAGCGTGTTGATCTGG+AGG | - | tig0030624:23557-23576 | Msa1443960:intergenic | 40.0% |
ATGGTACATGTGTCTGTTTG+TGG | - | tig0030624:23626-23645 | Msa1443960:intergenic | 40.0% | |
ACTAACTCTCCATTGCACAA+TGG | - | tig0030624:23658-23677 | Msa1443960:intergenic | 40.0% | |
!! | AGAGAAAGTACTCTCTCTGA+AGG | - | tig0030624:23870-23889 | Msa1443960:intergenic | 40.0% |
GTTACGTCCTTAGAAGGTTT+GGG | - | tig0030624:23894-23913 | Msa1443960:intergenic | 40.0% | |
AGTTACGTCCTTAGAAGGTT+TGG | - | tig0030624:23895-23914 | Msa1443960:intergenic | 40.0% | |
AAGGATTAGGATAGTGAGAG+AGG | - | tig0030624:23934-23953 | Msa1443960:intergenic | 40.0% | |
TGTCAAATCCAATTCACAGG+TGG | + | tig0030624:24280-24299 | Msa1443960:intron | 40.0% | |
ATGTGTATGTGTGTGGGTAT+CGG | + | tig0030624:24490-24509 | Msa1443960:intron | 40.0% | |
CACTGAATGGCATATGTACA+TGG | + | tig0030624:24533-24552 | Msa1443960:intron | 40.0% | |
TATGTACATGGGTTCGTATG+TGG | + | tig0030624:24545-24564 | Msa1443960:intron | 40.0% | |
ACCTGGTTATTGATCTGACT+TGG | + | tig0030624:24662-24681 | Msa1443960:intron | 40.0% | |
CCTGGTTATTGATCTGACTT+GGG | + | tig0030624:24663-24682 | Msa1443960:intron | 40.0% | |
!!! | CACAAGCTGTTTTTGAGACT+GGG | + | tig0030624:24712-24731 | Msa1443960:intron | 40.0% |
! | AGAGCATGGAGAATTTGTTC+GGG | + | tig0030624:24837-24856 | Msa1443960:CDS | 40.0% |
! | ATGGAGAATTTGTTCGGGTA+AGG | + | tig0030624:24842-24861 | Msa1443960:CDS | 40.0% |
TGCTTCAATGTTAAGACTCG+TGG | - | tig0030624:24889-24908 | Msa1443960:intergenic | 40.0% | |
TTGAGGTTTAATCCAGACAC+TGG | + | tig0030624:24937-24956 | Msa1443960:CDS | 40.0% | |
TGCTCATTCATACAGAACTG+CGG | - | tig0030624:24996-25015 | Msa1443960:intergenic | 40.0% | |
ATCATGGCAATGCTCAATCA+TGG | - | tig0030624:25196-25215 | Msa1443960:intergenic | 40.0% | |
! | ATAAAGCAATCGATTCAGGC+TGG | + | tig0030624:25232-25251 | Msa1443960:three_prime_UTR | 40.0% |
! | AACGGGTGAAGTGTTTATGC+AGG | - | tig0030624:7599-7618 | Msa1443960:intergenic | 45.0% |
!!! | GGATAAGTCGTCGGTTTTCA+CGG | - | tig0030624:7797-7816 | Msa1443960:intergenic | 45.0% |
GAAAACCGACGACTTATCCA+TGG | + | tig0030624:7798-7817 | Msa1443960:CDS | 45.0% | |
GGAAATTGATCCACCGTTTC+AGG | + | tig0030624:7819-7838 | Msa1443960:CDS | 45.0% | |
! | GTTACGGCGTTTTCCTGAAA+CGG | - | tig0030624:7835-7854 | Msa1443960:intergenic | 45.0% |
! | GAGAGATTTTCGCCAGTCTT+CGG | - | tig0030624:7860-7879 | Msa1443960:intergenic | 45.0% |
AATCGCCATGTTGTTAAGCC+TGG | + | tig0030624:8006-8025 | Msa1443960:CDS | 45.0% | |
GCTTACCAGGCTTAACAACA+TGG | - | tig0030624:8014-8033 | Msa1443960:intergenic | 45.0% | |
! | CAGGAAAAGAGCATGATGAG+AGG | - | tig0030624:8275-8294 | Msa1443960:intergenic | 45.0% |
TCAATTGACAGCTCCAAACG+TGG | - | tig0030624:8390-8409 | Msa1443960:intergenic | 45.0% | |
ATCCAACACTAGCAGCTTCA+GGG | - | tig0030624:9665-9684 | Msa1443960:intergenic | 45.0% | |
AATCCAACACTAGCAGCTTC+AGG | - | tig0030624:9666-9685 | Msa1443960:intergenic | 45.0% | |
! | TTGGTACCCAAGTTGAGTTC+TGG | + | tig0030624:9893-9912 | Msa1443960:intron | 45.0% |
!! | TGCCAGGTTTCAATTTTGGC+CGG | + | tig0030624:10255-10274 | Msa1443960:intron | 45.0% |
TACCGGCCAAAATTGAAACC+TGG | - | tig0030624:10260-10279 | Msa1443960:intergenic | 45.0% | |
TCCCCAGTTATAGATTGGCA+GGG | + | tig0030624:10876-10895 | Msa1443960:CDS | 45.0% | |
TGCCCTGCCAATCTATAACT+GGG | - | tig0030624:10881-10900 | Msa1443960:intergenic | 45.0% | |
AGTTATAGATTGGCAGGGCA+GGG | + | tig0030624:10881-10900 | Msa1443960:CDS | 45.0% | |
!! | TTCAGGTTGTGAGGGCATTA+AGG | + | tig0030624:11091-11110 | Msa1443960:intron | 45.0% |
ATGCCAGTTTCTATACCTCG+TGG | + | tig0030624:11153-11172 | Msa1443960:CDS | 45.0% | |
GTACCACGAGGTATAGAAAC+TGG | - | tig0030624:11159-11178 | Msa1443960:intergenic | 45.0% | |
TATACCTCGTGGTACTCTTC+AGG | + | tig0030624:11164-11183 | Msa1443960:CDS | 45.0% | |
GAGTCTCGTCAAACCCTTTA+TGG | - | tig0030624:11810-11829 | Msa1443960:intergenic | 45.0% | |
CAGGGCAAGGGAACATTTAA+AGG | - | tig0030624:11915-11934 | Msa1443960:intergenic | 45.0% | |
!! | TGATTTGTTTAGGTGCCAGG+TGG | + | tig0030624:12095-12114 | Msa1443960:intron | 45.0% |
GTACATCGTAAGCAGCAGTT+TGG | - | tig0030624:12554-12573 | Msa1443960:intergenic | 45.0% | |
!!! | CACCCTTTTTTGTAGCCTCA+AGG | - | tig0030624:12813-12832 | Msa1443960:intergenic | 45.0% |
GTTTAGCTGACCCCACTTAA+TGG | + | tig0030624:13054-13073 | Msa1443960:intron | 45.0% | |
TGACCCCACTTAATGGGATA+AGG | + | tig0030624:13061-13080 | Msa1443960:intron | 45.0% | |
! | CCAAGCCTTATCCCATTAAG+TGG | - | tig0030624:13069-13088 | Msa1443960:intergenic | 45.0% |
CCACTTAATGGGATAAGGCT+TGG | + | tig0030624:13066-13085 | Msa1443960:intron | 45.0% | |
GGTGATTCCACTCTTTCTGA+AGG | + | tig0030624:13155-13174 | Msa1443960:intron | 45.0% | |
GATTGATCACGTCACATGTC+AGG | - | tig0030624:13450-13469 | Msa1443960:intergenic | 45.0% | |
ACTGTGCCACCCATGAAATA+GGG | + | tig0030624:13527-13546 | Msa1443960:intron | 45.0% | |
CTTAGTTGCCACTGTGAACT+TGG | + | tig0030624:13611-13630 | Msa1443960:intron | 45.0% | |
ATCACAAGCCAAGTTCACAG+TGG | - | tig0030624:13622-13641 | Msa1443960:intergenic | 45.0% | |
CTAACCTGCTGATAGGAAAG+AGG | - | tig0030624:13783-13802 | Msa1443960:intergenic | 45.0% | |
TGTTGTGGGGCTTATGACAA+GGG | - | tig0030624:13939-13958 | Msa1443960:intergenic | 45.0% | |
TTGTTGTGGGGCTTATGACA+AGG | - | tig0030624:13940-13959 | Msa1443960:intergenic | 45.0% | |
GAGGGCTGAGTAAACATATC+CGG | - | tig0030624:14484-14503 | Msa1443960:intergenic | 45.0% | |
AGAGCAACAGAAGCAACTTG+GGG | - | tig0030624:14506-14525 | Msa1443960:intergenic | 45.0% | |
GAAGAGCAACAGAAGCAACT+TGG | - | tig0030624:14508-14527 | Msa1443960:intergenic | 45.0% | |
!! | GTTTCTGGCCTGCATTAAAG+TGG | - | tig0030624:14568-14587 | Msa1443960:intergenic | 45.0% |
CAATTCCACTAACCCAGTAC+TGG | - | tig0030624:14741-14760 | Msa1443960:intergenic | 45.0% | |
TCATGCACAAGGGTCATTAC+TGG | + | tig0030624:14898-14917 | Msa1443960:intron | 45.0% | |
CATGCACAAGGGTCATTACT+GGG | + | tig0030624:14899-14918 | Msa1443960:intron | 45.0% | |
TTAGGCTCTGTTTGGGAGTT+TGG | + | tig0030624:16335-16354 | Msa1443960:intron | 45.0% | |
ATTGTATTGGAGGAGGAGTC+TGG | - | tig0030624:16554-16573 | Msa1443960:intergenic | 45.0% | |
TGGAGAGATATGAGAGTGGA+GGG | - | tig0030624:16636-16655 | Msa1443960:intergenic | 45.0% | |
ATGGAGAGATATGAGAGTGG+AGG | - | tig0030624:16637-16656 | Msa1443960:intergenic | 45.0% | |
!!! | TTTTGGGAGTTTTGAGGGGA+GGG | - | tig0030624:16711-16730 | Msa1443960:intergenic | 45.0% |
!!! | ATTTTGGGAGTTTTGAGGGG+AGG | - | tig0030624:16712-16731 | Msa1443960:intergenic | 45.0% |
TCTCAGTTGTCCACACTACT+TGG | - | tig0030624:16861-16880 | Msa1443960:intergenic | 45.0% | |
TGACAGTTGATCGCCATGAA+TGG | + | tig0030624:16948-16967 | Msa1443960:CDS | 45.0% | |
AGTCAAAGAACTTGGACGAC+TGG | - | tig0030624:17092-17111 | Msa1443960:intergenic | 45.0% | |
AGTCGTCCAAGTTCTTTGAC+TGG | + | tig0030624:17091-17110 | Msa1443960:CDS | 45.0% | |
TGTGTGTGAAGGTAACCATC+AGG | + | tig0030624:17135-17154 | Msa1443960:CDS | 45.0% | |
TGAAGGTAACCATCAGGAGT+TGG | + | tig0030624:17141-17160 | Msa1443960:CDS | 45.0% | |
GAGTGTGTATCTCACGACAA+TGG | + | tig0030624:17208-17227 | Msa1443960:CDS | 45.0% | |
TCTCACGACAATGGATCTGA+TGG | + | tig0030624:17217-17236 | Msa1443960:CDS | 45.0% | |
CTCACGACAATGGATCTGAT+GGG | + | tig0030624:17218-17237 | Msa1443960:CDS | 45.0% | |
TATGTCCTTGAATGAACCCG+AGG | + | tig0030624:17294-17313 | Msa1443960:CDS | 45.0% | |
!!! | GGCACCTGATTTTTCTAGCT+TGG | - | tig0030624:17323-17342 | Msa1443960:intergenic | 45.0% |
! | AGTGACTGATGCATTTGCTG+TGG | - | tig0030624:17389-17408 | Msa1443960:intergenic | 45.0% |
CCATCAAGCATACAAGATGG+AGG | - | tig0030624:17600-17619 | Msa1443960:intergenic | 45.0% | |
CCTCCATCTTGTATGCTTGA+TGG | + | tig0030624:17597-17616 | Msa1443960:CDS | 45.0% | |
GCTTTCCCAGTTGAAATTCC+TGG | + | tig0030624:17744-17763 | Msa1443960:CDS | 45.0% | |
CCTCTCCAGGAATTTCAACT+GGG | - | tig0030624:17752-17771 | Msa1443960:intergenic | 45.0% | |
ACCTCTCCAGGAATTTCAAC+TGG | - | tig0030624:17753-17772 | Msa1443960:intergenic | 45.0% | |
GTGTCTTCTTTCTTCATGGC+AGG | + | tig0030624:17850-17869 | Msa1443960:intron | 45.0% | |
TCTTCTTTCTTCATGGCAGG+TGG | + | tig0030624:17853-17872 | Msa1443960:intron | 45.0% | |
AAGCTAAACTGGCTACTCCT+TGG | + | tig0030624:18109-18128 | Msa1443960:intron | 45.0% | |
AGCTAAACTGGCTACTCCTT+GGG | + | tig0030624:18110-18129 | Msa1443960:intron | 45.0% | |
TATTGGTCGCTCTGTAACGT+GGG | - | tig0030624:18678-18697 | Msa1443960:intergenic | 45.0% | |
ATATTGGTCGCTCTGTAACG+TGG | - | tig0030624:18679-18698 | Msa1443960:intergenic | 45.0% | |
ACGTTACAGAGCGACCAATA+TGG | + | tig0030624:18678-18697 | Msa1443960:CDS | 45.0% | |
GGTGTGCTAACAGATGAACA+AGG | + | tig0030624:18843-18862 | Msa1443960:CDS | 45.0% | |
AAGGAAGGGTCCAAGCTTTA+TGG | + | tig0030624:18862-18881 | Msa1443960:CDS | 45.0% | |
! | AGGAAGGGTCCAAGCTTTAT+GGG | + | tig0030624:18863-18882 | Msa1443960:CDS | 45.0% |
AGAAGCTTCCCCATAAAGCT+TGG | - | tig0030624:18875-18894 | Msa1443960:intergenic | 45.0% | |
! | CTTTTGCGTGCTTACATGGA+TGG | + | tig0030624:18919-18938 | Msa1443960:intron | 45.0% |
GTAAACACAATCCCTTACCG+TGG | - | tig0030624:19321-19340 | Msa1443960:intergenic | 45.0% | |
TTCAAAAGGCTACCTGATGG+TGG | + | tig0030624:19622-19641 | Msa1443960:intron | 45.0% | |
TCAAAAGGCTACCTGATGGT+GGG | + | tig0030624:19623-19642 | Msa1443960:intron | 45.0% | |
GTCAAGCACATTCAGGCATT+TGG | - | tig0030624:19942-19961 | Msa1443960:intergenic | 45.0% | |
AATGCCTGAATGTGCTTGAC+TGG | + | tig0030624:19942-19961 | Msa1443960:intron | 45.0% | |
CTGAATGTGCTTGACTGGAA+GGG | + | tig0030624:19947-19966 | Msa1443960:intron | 45.0% | |
GGAAGGGTGGAAAGCAAAAA+CGG | + | tig0030624:19963-19982 | Msa1443960:intron | 45.0% | |
GTGGCGTTTGGTTGAGAATA+TGG | + | tig0030624:20038-20057 | Msa1443960:intron | 45.0% | |
GGGACACCTCTTCTCATAAA+TGG | + | tig0030624:20733-20752 | Msa1443960:CDS | 45.0% | |
! | CTTTCAAAGGCTCGCAGTTT+TGG | + | tig0030624:20814-20833 | Msa1443960:CDS | 45.0% |
TAGAGATGACCTAGTCCCAA+AGG | - | tig0030624:21328-21347 | Msa1443960:intergenic | 45.0% | |
GGTGGATCCTAAATCCTATC+TGG | - | tig0030624:21360-21379 | Msa1443960:intergenic | 45.0% | |
! | AGGATTTAGGATCCACCGAT+TGG | + | tig0030624:21363-21382 | Msa1443960:intron | 45.0% |
ATTTCTCAAAGGCCAATCGG+TGG | - | tig0030624:21378-21397 | Msa1443960:intergenic | 45.0% | |
!! | CCGATTGGCCTTTGAGAAAT+TGG | + | tig0030624:21378-21397 | Msa1443960:intron | 45.0% |
!! | GGTGGGTTAGAGAGATAGTT+AGG | + | tig0030624:21438-21457 | Msa1443960:intron | 45.0% |
GAGTTATGGCCTTCTGGTAT+TGG | + | tig0030624:21528-21547 | Msa1443960:intron | 45.0% | |
AAACAATGGCAGAGCTTCGA+GGG | - | tig0030624:21566-21585 | Msa1443960:intergenic | 45.0% | |
AAAACAATGGCAGAGCTTCG+AGG | - | tig0030624:21567-21586 | Msa1443960:intergenic | 45.0% | |
!! | CTGCCATTGTTTTGTGATCC+CGG | + | tig0030624:21574-21593 | Msa1443960:intron | 45.0% |
!! | TGCCATTGTTTTGTGATCCC+GGG | + | tig0030624:21575-21594 | Msa1443960:intron | 45.0% |
GAAAATGAGGAATACCTCCC+GGG | - | tig0030624:21595-21614 | Msa1443960:intergenic | 45.0% | |
!! | GCCGAGTTGATTCCATGATT+TGG | + | tig0030624:21710-21729 | Msa1443960:intron | 45.0% |
GCTTTCCTTCCACCAAATCA+TGG | - | tig0030624:21725-21744 | Msa1443960:intergenic | 45.0% | |
!! | GCTGAGCAATATTTTGAGGG+CGG | + | tig0030624:21764-21783 | Msa1443960:intron | 45.0% |
! | ATTTGGAATGCTCACCTTCC+AGG | - | tig0030624:21867-21886 | Msa1443960:intergenic | 45.0% |
GCATTCCAAATCCTTCTTGG+TGG | + | tig0030624:21876-21895 | Msa1443960:intron | 45.0% | |
! | TGCATTCCCTATTTCTTGCG+TGG | - | tig0030624:22230-22249 | Msa1443960:intergenic | 45.0% |
! | GGTATTGAGTGGATATTGGG+TGG | - | tig0030624:22297-22316 | Msa1443960:intergenic | 45.0% |
AGCGCATAGTTGGTTATCAG+AGG | - | tig0030624:22318-22337 | Msa1443960:intergenic | 45.0% | |
! | GCAAAACCTGTCGCCTTATT+GGG | - | tig0030624:22560-22579 | Msa1443960:intergenic | 45.0% |
! | CGACAGGTTTTGCGTGTTAA+AGG | + | tig0030624:22567-22586 | Msa1443960:intron | 45.0% |
CGTGTTAAAGGTTGTTTGGC+TGG | + | tig0030624:22579-22598 | Msa1443960:intron | 45.0% | |
AGGTTGTTTGGCTGGATCAA+AGG | + | tig0030624:22587-22606 | Msa1443960:intron | 45.0% | |
!!! | CTGAGCATCTTTTGGAGCAA+GGG | + | tig0030624:22610-22629 | Msa1443960:intron | 45.0% |
!!! | TGAGCATCTTTTGGAGCAAG+GGG | + | tig0030624:22611-22630 | Msa1443960:intron | 45.0% |
! | ATGTCATGGAAGCATGTGAC+AGG | - | tig0030624:22663-22682 | Msa1443960:intergenic | 45.0% |
! | CATCTGAAGCTTGCCATCAT+TGG | - | tig0030624:22721-22740 | Msa1443960:intergenic | 45.0% |
! | TCAGATGACTATTTTCCGGC+AGG | + | tig0030624:22734-22753 | Msa1443960:intron | 45.0% |
! | TGATTTTGTCTAGGGACGAG+AGG | + | tig0030624:22853-22872 | Msa1443960:intron | 45.0% |
ACGAGAGGTTGAACTTCTTG+TGG | + | tig0030624:22868-22887 | Msa1443960:CDS | 45.0% | |
CGAGAGGTTGAACTTCTTGT+GGG | + | tig0030624:22869-22888 | Msa1443960:CDS | 45.0% | |
AGTTCAGGATCCACATTCAG+CGG | + | tig0030624:22949-22968 | Msa1443960:CDS | 45.0% | |
TTTCTTCCTGAAGAGGGTCA+TGG | + | tig0030624:22986-23005 | Msa1443960:CDS | 45.0% | |
TATACACCATGACCCTCTTC+AGG | - | tig0030624:22995-23014 | Msa1443960:intergenic | 45.0% | |
TCTGTGTAGACCGAGATCAA+TGG | - | tig0030624:23502-23521 | Msa1443960:intergenic | 45.0% | |
TTGATCTCGGTCTACACAGA+TGG | + | tig0030624:23502-23521 | Msa1443960:intron | 45.0% | |
CACAGATGGAAGGTCTGAAT+CGG | + | tig0030624:23516-23535 | Msa1443960:intron | 45.0% | |
TGCACAATGGTATGGAACGA+TGG | - | tig0030624:23645-23664 | Msa1443960:intergenic | 45.0% | |
CGTTCCATACCATTGTGCAA+TGG | + | tig0030624:23646-23665 | Msa1443960:intron | 45.0% | |
CTCTCCATTGCACAATGGTA+TGG | - | tig0030624:23653-23672 | Msa1443960:intergenic | 45.0% | |
TTCTCTGCCCAAACCTTCTA+AGG | + | tig0030624:23884-23903 | Msa1443960:intron | 45.0% | |
GGGGAATGACAGTTATACGA+AGG | - | tig0030624:23953-23972 | Msa1443960:intergenic | 45.0% | |
!! | CAATTCACAGGTGGTGTCAT+GGG | + | tig0030624:24289-24308 | Msa1443960:intron | 45.0% |
GGGAGTCCTGTACATAGATA+TGG | + | tig0030624:24309-24328 | Msa1443960:CDS | 45.0% | |
ATGGTCTGTATGCTCTTCAG+TGG | + | tig0030624:24328-24347 | Msa1443960:CDS | 45.0% | |
CCCAAGTCAGATCAATAACC+AGG | - | tig0030624:24666-24685 | Msa1443960:intergenic | 45.0% | |
! | GACTTGGGTCAAAGTGTTTG+AGG | + | tig0030624:24678-24697 | Msa1443960:intron | 45.0% |
CCAGTCTCAAAAACAGCTTG+TGG | - | tig0030624:24714-24733 | Msa1443960:intergenic | 45.0% | |
!!! | CCACAAGCTGTTTTTGAGAC+TGG | + | tig0030624:24711-24730 | Msa1443960:intron | 45.0% |
GTAAGGACAGTTCACCTCAA+CGG | + | tig0030624:24859-24878 | Msa1443960:CDS | 45.0% | |
TAAGGACAGTTCACCTCAAC+GGG | + | tig0030624:24860-24879 | Msa1443960:CDS | 45.0% | |
! | ATTGGCCTACATGGGAATTG+AGG | + | tig0030624:24920-24939 | Msa1443960:CDS | 45.0% |
CCTTTGCTACTGCATACGTA+GGG | - | tig0030624:25040-25059 | Msa1443960:intergenic | 45.0% | |
TCCTTTGCTACTGCATACGT+AGG | - | tig0030624:25041-25060 | Msa1443960:intergenic | 45.0% | |
!! | AAAGCGTTGCAGACACGATT+TGG | + | tig0030624:25113-25132 | Msa1443960:three_prime_UTR | 45.0% |
!!! | AAATTCTATAATAATTATTT+TGG | + | tig0030624:9453-9472 | Msa1443960:intron | 5.0% |
!!! | TAGTTATTTTTTATTAAATA+TGG | + | tig0030624:10635-10654 | Msa1443960:intron | 5.0% |
!!! | ATTTTATAGTTTTTAATAAT+AGG | - | tig0030624:11328-11347 | Msa1443960:intergenic | 5.0% |
!! | ATTATAAAATTATCTAAATT+TGG | + | tig0030624:15650-15669 | Msa1443960:intron | 5.0% |
!! | TTATAAAATTATCTAAATTT+GGG | + | tig0030624:15651-15670 | Msa1443960:intron | 5.0% |
!! | TAAAAAAAAAAAAAAAAAAG+AGG | - | tig0030624:20977-20996 | Msa1443960:intergenic | 5.0% |
CAATGGAAGATCCATCGGAG+CGG | + | tig0030624:7740-7759 | Msa1443960:exon | 50.0% | |
!!! | TAAGTCGTCGGTTTTCACGG+CGG | - | tig0030624:7794-7813 | Msa1443960:intergenic | 50.0% |
ATACGAAGAACGACGACAGC+AGG | - | tig0030624:7895-7914 | Msa1443960:intergenic | 50.0% | |
! | AAAACCAGTAGCGGAGCTAG+CGG | - | tig0030624:7953-7972 | Msa1443960:intergenic | 50.0% |
!! | GCAGCGTGTGTTTGGTTCTA+CGG | + | tig0030624:8744-8763 | Msa1443960:intron | 50.0% |
!! | CAGCGTGTGTTTGGTTCTAC+GGG | + | tig0030624:8745-8764 | Msa1443960:intron | 50.0% |
!! | AGCGTGTGTTTGGTTCTACG+GGG | + | tig0030624:8746-8765 | Msa1443960:intron | 50.0% |
TCCAACACTAGCAGCTTCAG+GGG | - | tig0030624:9664-9683 | Msa1443960:intergenic | 50.0% | |
GATATGGCTCCTTTCAGAGC+AGG | + | tig0030624:10361-10380 | Msa1443960:intron | 50.0% | |
GGACCAAAGGAGGATCAAGT+GGG | + | tig0030624:10853-10872 | Msa1443960:CDS | 50.0% | |
GTGGGTCCCCAGTTATAGAT+TGG | + | tig0030624:10871-10890 | Msa1443960:CDS | 50.0% | |
GTCCCCAGTTATAGATTGGC+AGG | + | tig0030624:10875-10894 | Msa1443960:CDS | 50.0% | |
GCCCTGCCAATCTATAACTG+GGG | - | tig0030624:10880-10899 | Msa1443960:intergenic | 50.0% | |
CTGCCCTGCCAATCTATAAC+TGG | - | tig0030624:10882-10901 | Msa1443960:intergenic | 50.0% | |
CAGTTATAGATTGGCAGGGC+AGG | + | tig0030624:10880-10899 | Msa1443960:CDS | 50.0% | |
!! | TGCACTTGTTGTCTTGCTCC+CGG | - | tig0030624:10922-10941 | Msa1443960:intergenic | 50.0% |
CAAGAGCTCACCCTTTCCAA+AGG | - | tig0030624:10960-10979 | Msa1443960:intergenic | 50.0% | |
!! | CAAACCTGAAGAGTACCACG+AGG | - | tig0030624:11171-11190 | Msa1443960:intergenic | 50.0% |
GCGTAAATGATGCAGGGCAA+GGG | - | tig0030624:11927-11946 | Msa1443960:intergenic | 50.0% | |
AGCGTAAATGATGCAGGGCA+AGG | - | tig0030624:11928-11947 | Msa1443960:intergenic | 50.0% | |
AGCATTCCAGTTTCACTGGC+AGG | - | tig0030624:11985-12004 | Msa1443960:intergenic | 50.0% | |
TGTTTATAGGCTGGACCACC+TGG | - | tig0030624:12113-12132 | Msa1443960:intergenic | 50.0% | |
TTTCATGGGTGGCACAGTGA+GGG | - | tig0030624:13525-13544 | Msa1443960:intergenic | 50.0% | |
ATTTCATGGGTGGCACAGTG+AGG | - | tig0030624:13526-13545 | Msa1443960:intergenic | 50.0% | |
CACTGTGCCACCCATGAAAT+AGG | + | tig0030624:13526-13545 | Msa1443960:intron | 50.0% | |
CCTGCTGATAGGAAAGAGGT+TGG | - | tig0030624:13779-13798 | Msa1443960:intergenic | 50.0% | |
CCAACCTCTTTCCTATCAGC+AGG | + | tig0030624:13776-13795 | Msa1443960:CDS | 50.0% | |
AGCCCCACAACAAAGTTCAC+AGG | + | tig0030624:13947-13966 | Msa1443960:intron | 50.0% | |
CAACAGAAGCAACTTGGGGA+GGG | - | tig0030624:14502-14521 | Msa1443960:intergenic | 50.0% | |
GCTATGTGGATCGTCATCGA+AGG | + | tig0030624:15142-15161 | Msa1443960:CDS | 50.0% | |
TGTGGATCGTCATCGAAGGA+AGG | + | tig0030624:15146-15165 | Msa1443960:CDS | 50.0% | |
GCTCTGTTTGGGAGTTTGGA+GGG | + | tig0030624:16339-16358 | Msa1443960:intron | 50.0% | |
CTCTGTTTGGGAGTTTGGAG+GGG | + | tig0030624:16340-16359 | Msa1443960:intron | 50.0% | |
TCTGTTTGGGAGTTTGGAGG+GGG | + | tig0030624:16341-16360 | Msa1443960:intron | 50.0% | |
TATTGGAGGAGGAGTCTGGA+GGG | - | tig0030624:16550-16569 | Msa1443960:intergenic | 50.0% | |
ATATGAGAGTGGAGGGCTTG+GGG | - | tig0030624:16629-16648 | Msa1443960:intergenic | 50.0% | |
GATATGAGAGTGGAGGGCTT+GGG | - | tig0030624:16630-16649 | Msa1443960:intergenic | 50.0% | |
AGATATGAGAGTGGAGGGCT+TGG | - | tig0030624:16631-16650 | Msa1443960:intergenic | 50.0% | |
!!! | TTTGGGAGTTTTGAGGGGAG+GGG | - | tig0030624:16710-16729 | Msa1443960:intergenic | 50.0% |
! | CCTTGTTTGATGGCTGCAGT+CGG | + | tig0030624:16919-16938 | Msa1443960:intron | 50.0% |
CACCTCCCCAGATTTACACT+CGG | + | tig0030624:16975-16994 | Msa1443960:CDS | 50.0% | |
ACCTCCCCAGATTTACACTC+GGG | + | tig0030624:16976-16995 | Msa1443960:CDS | 50.0% | |
TCGTCCCGAGTGTAAATCTG+GGG | - | tig0030624:16983-17002 | Msa1443960:intergenic | 50.0% | |
GTCGTCCCGAGTGTAAATCT+GGG | - | tig0030624:16984-17003 | Msa1443960:intergenic | 50.0% | |
TGTCGTCCCGAGTGTAAATC+TGG | - | tig0030624:16985-17004 | Msa1443960:intergenic | 50.0% | |
AAGCAGGCTTAGCAATCCAG+AGG | - | tig0030624:17015-17034 | Msa1443960:intergenic | 50.0% | |
TTGACTGGTGAACATGCTCG+TGG | + | tig0030624:17106-17125 | Msa1443960:CDS | 50.0% | |
TGACTGGTGAACATGCTCGT+GGG | + | tig0030624:17107-17126 | Msa1443960:CDS | 50.0% | |
AACCATCAGGAGTTGGCTGA+TGG | + | tig0030624:17148-17167 | Msa1443960:CDS | 50.0% | |
GGTTTCCTCGGGTTCATTCA+AGG | - | tig0030624:17302-17321 | Msa1443960:intergenic | 50.0% | |
TCAGGTGCCTTACCAGATGA+TGG | + | tig0030624:17334-17353 | Msa1443960:CDS | 50.0% | |
CAGGTGCCTTACCAGATGAT+GGG | + | tig0030624:17335-17354 | Msa1443960:CDS | 50.0% | |
AGGAACGTGAACCTGAAGAC+AGG | - | tig0030624:17580-17599 | Msa1443960:intergenic | 50.0% | |
CCCAGTTGAAATTCCTGGAG+AGG | + | tig0030624:17749-17768 | Msa1443960:CDS | 50.0% | |
CTGCAGAGTTACTTCCAGGT+GGG | + | tig0030624:17960-17979 | Msa1443960:intron | 50.0% | |
GAATCTCCTCGACGTAATGC+CGG | - | tig0030624:18556-18575 | Msa1443960:intergenic | 50.0% | |
GAAGCCTTCAAGCAACCTCT+AGG | + | tig0030624:18599-18618 | Msa1443960:CDS | 50.0% | |
ATTGGTCGCTCTGTAACGTG+GGG | - | tig0030624:18677-18696 | Msa1443960:intergenic | 50.0% | |
! | GGAAGGGTCCAAGCTTTATG+GGG | + | tig0030624:18864-18883 | Msa1443960:CDS | 50.0% |
ATGGGGAAGCTTCTCTACTC+AGG | + | tig0030624:18881-18900 | Msa1443960:CDS | 50.0% | |
CGTGCTTACATGGATGGATC+TGG | + | tig0030624:18925-18944 | Msa1443960:intron | 50.0% | |
ACACCAGATTTGGGTGAGCT+TGG | + | tig0030624:19168-19187 | Msa1443960:intron | 50.0% | |
CACCAGATTTGGGTGAGCTT+GGG | + | tig0030624:19169-19188 | Msa1443960:intron | 50.0% | |
CCTTCCAGTCAAGCACATTC+AGG | - | tig0030624:19949-19968 | Msa1443960:intergenic | 50.0% | |
CCTGAATGTGCTTGACTGGA+AGG | + | tig0030624:19946-19965 | Msa1443960:intron | 50.0% | |
AATGTGCTTGACTGGAAGGG+TGG | + | tig0030624:19950-19969 | Msa1443960:intron | 50.0% | |
TCGCTTCCTCTTATGTGGTG+TGG | + | tig0030624:20244-20263 | Msa1443960:intron | 50.0% | |
CATGTAACATGCCCACCCTA+AGG | + | tig0030624:20374-20393 | Msa1443960:intron | 50.0% | |
ATGCAGCGGCTACAACCTTA+GGG | - | tig0030624:20392-20411 | Msa1443960:intergenic | 50.0% | |
TATGCAGCGGCTACAACCTT+AGG | - | tig0030624:20393-20412 | Msa1443960:intergenic | 50.0% | |
TCAGGGCTTTGCTTATGCAG+CGG | - | tig0030624:20406-20425 | Msa1443960:intergenic | 50.0% | |
TGTCTGACCTATGCTGCCTT+TGG | + | tig0030624:21309-21328 | Msa1443960:intron | 50.0% | |
GTCTGACCTATGCTGCCTTT+GGG | + | tig0030624:21310-21329 | Msa1443960:intron | 50.0% | |
TAGAGAGGACTGTTGGAGTG+AGG | + | tig0030624:21486-21505 | Msa1443960:intron | 50.0% | |
CTCCCGGGATCACAAAACAA+TGG | - | tig0030624:21580-21599 | Msa1443960:intergenic | 50.0% | |
!! | CATTGTTTTGTGATCCCGGG+AGG | + | tig0030624:21578-21597 | Msa1443960:intron | 50.0% |
TGAGACGAGAGGCTCTTTGT+CGG | + | tig0030624:21834-21853 | Msa1443960:intron | 50.0% | |
CTCTTTGTCGGTGAGTTACC+TGG | + | tig0030624:21846-21865 | Msa1443960:intron | 50.0% | |
TTGTCGGTGAGTTACCTGGA+AGG | + | tig0030624:21850-21869 | Msa1443960:intron | 50.0% | |
CAACAATTGGGAGGGCTAGA+AGG | + | tig0030624:21995-22014 | Msa1443960:intron | 50.0% | |
TGGATATTGGGTGGGAGGTT+GGG | - | tig0030624:22288-22307 | Msa1443960:intergenic | 50.0% | |
TTGAGTGGATATTGGGTGGG+AGG | - | tig0030624:22293-22312 | Msa1443960:intergenic | 50.0% | |
GAAAGACTGCAGCGCATAGT+TGG | - | tig0030624:22328-22347 | Msa1443960:intergenic | 50.0% | |
GAAAGACCCAATAAGGCGAC+AGG | + | tig0030624:22551-22570 | Msa1443960:CDS | 50.0% | |
CGCAAAACCTGTCGCCTTAT+TGG | - | tig0030624:22561-22580 | Msa1443960:intergenic | 50.0% | |
!!! | GCTGAGCATCTTTTGGAGCA+AGG | + | tig0030624:22609-22628 | Msa1443960:intron | 50.0% |
!!! | TCTTTTGGAGCAAGGGGACA+TGG | + | tig0030624:22617-22636 | Msa1443960:intron | 50.0% |
GTGGGAACAGATGTTAGGGA+TGG | + | tig0030624:22887-22906 | Msa1443960:CDS | 50.0% | |
AGAGGGTCATGGTGTATACG+TGG | + | tig0030624:22997-23016 | Msa1443960:CDS | 50.0% | |
GTCATGGTGTATACGTGGCA+AGG | + | tig0030624:23002-23021 | Msa1443960:CDS | 50.0% | |
TCTCGGTCTACACAGATGGA+AGG | + | tig0030624:23506-23525 | Msa1443960:intron | 50.0% | |
! | GTGTTGATCTGGAGGATGTC+AGG | - | tig0030624:23549-23568 | Msa1443960:intergenic | 50.0% |
CACGACATAATGCAGATGCC+TGG | - | tig0030624:23595-23614 | Msa1443960:intergenic | 50.0% | |
!! | AGTGCTCTGTGGGTTAGCTA+GGG | - | tig0030624:23844-23863 | Msa1443960:intergenic | 50.0% |
AGTGAGGGATGTCGAGAATC+TGG | - | tig0030624:24098-24117 | Msa1443960:intergenic | 50.0% | |
CAAGCATGCAAGCAAAACGC+TGG | - | tig0030624:24233-24252 | Msa1443960:intergenic | 50.0% | |
CCATGACACCACCTGTGAAT+TGG | - | tig0030624:24291-24310 | Msa1443960:intergenic | 50.0% | |
! | CCAATTCACAGGTGGTGTCA+TGG | + | tig0030624:24288-24307 | Msa1443960:intron | 50.0% |
!! | TGTATGTGTGTGGGTATCGG+TGG | + | tig0030624:24493-24512 | Msa1443960:intron | 50.0% |
ACATGGGTTCGTATGTGGCA+AGG | + | tig0030624:24550-24569 | Msa1443960:intron | 50.0% | |
CATGGGTTCGTATGTGGCAA+GGG | + | tig0030624:24551-24570 | Msa1443960:intron | 50.0% | |
TGTTGGCAGGAACTAGAGCA+TGG | + | tig0030624:24823-24842 | Msa1443960:intron | 50.0% | |
CGATGCCAAATTCCAGTGTC+TGG | - | tig0030624:24952-24971 | Msa1443960:intergenic | 50.0% | |
CCCTACGTATGCAGTAGCAA+AGG | + | tig0030624:25037-25056 | Msa1443960:three_prime_UTR | 50.0% | |
AATCTGGATCTGCGTCTTCC+AGG | + | tig0030624:25070-25089 | Msa1443960:three_prime_UTR | 50.0% | |
AAGCGCTTCATCACTCGACG+TGG | + | tig0030624:7628-7647 | Msa1443960:five_prime_UTR | 55.0% | |
GAAGATCCATCGGAGCGGTT+AGG | + | tig0030624:7745-7764 | Msa1443960:CDS | 55.0% | |
! | ACGGCGTTTTCCTGAAACGG+TGG | - | tig0030624:7832-7851 | Msa1443960:intergenic | 55.0% |
TCGCCAGTCTTCGGCAGTTA+CGG | - | tig0030624:7851-7870 | Msa1443960:intergenic | 55.0% | |
CGACAGCAGGAACGACTTTG+CGG | - | tig0030624:7882-7901 | Msa1443960:intergenic | 55.0% | |
TGCACGGTAACGAGCTTACC+AGG | - | tig0030624:8027-8046 | Msa1443960:intergenic | 55.0% | |
!! | GCGTGTGTTTGGTTCTACGG+GGG | + | tig0030624:8747-8766 | Msa1443960:intron | 55.0% |
TGGCTCCTTTCAGAGCAGGT+TGG | + | tig0030624:10365-10384 | Msa1443960:intron | 55.0% | |
GGGACCAAAGGAGGATCAAG+TGG | + | tig0030624:10852-10871 | Msa1443960:CDS | 55.0% | |
GGACCCACTTGATCCTCCTT+TGG | - | tig0030624:10859-10878 | Msa1443960:intergenic | 55.0% | |
TTGTCTTGCTCCCGGCATTC+AGG | - | tig0030624:10914-10933 | Msa1443960:intergenic | 55.0% | |
AAGGGTTTGACGAGACTCGC+CGG | + | tig0030624:11812-11831 | Msa1443960:CDS | 55.0% | |
!! | TCTCACTTCTGAGGCCAAGC+CGG | - | tig0030624:11834-11853 | Msa1443960:intergenic | 55.0% |
CCTGCTCTGTCTCACTTCTG+AGG | - | tig0030624:11843-11862 | Msa1443960:intergenic | 55.0% | |
CCTCAGAAGTGAGACAGAGC+AGG | + | tig0030624:11840-11859 | Msa1443960:CDS | 55.0% | |
GCTTCTCCTGCCAGTGAAAC+TGG | + | tig0030624:11976-11995 | Msa1443960:CDS | 55.0% | |
GATGTCCTTGTCCGCGTCAA+TGG | + | tig0030624:12146-12165 | Msa1443960:CDS | 55.0% | |
CTTCACCATTGACGCGGACA+AGG | - | tig0030624:12154-12173 | Msa1443960:intergenic | 55.0% | |
ATGGGGGCCTTCAGAAAGAG+TGG | - | tig0030624:13165-13184 | Msa1443960:intergenic | 55.0% | |
TTCATGGGTGGCACAGTGAG+GGG | - | tig0030624:13524-13543 | Msa1443960:intergenic | 55.0% | |
GTGGGGCTTATGACAAGGGA+CGG | - | tig0030624:13935-13954 | Msa1443960:intergenic | 55.0% | |
GCAACAGAAGCAACTTGGGG+AGG | - | tig0030624:14503-14522 | Msa1443960:intergenic | 55.0% | |
! | AAGGGGTGCACGAGTACCAT+TGG | + | tig0030624:15110-15129 | Msa1443960:CDS | 55.0% |
GGCTCTGTTTGGGAGTTTGG+AGG | + | tig0030624:16338-16357 | Msa1443960:intron | 55.0% | |
TTTGGGAGTTTGGAGGGGGA+GGG | + | tig0030624:16345-16364 | Msa1443960:intron | 55.0% | |
!!! | AGGGAGGGAAGGGTTTTGGA+GGG | + | tig0030624:16364-16383 | Msa1443960:intron | 55.0% |
GTATTGGAGGAGGAGTCTGG+AGG | - | tig0030624:16551-16570 | Msa1443960:intergenic | 55.0% | |
TATGAGAGTGGAGGGCTTGG+GGG | - | tig0030624:16628-16647 | Msa1443960:intergenic | 55.0% | |
CCGACTGCAGCCATCAAACA+AGG | - | tig0030624:16922-16941 | Msa1443960:intergenic | 55.0% | |
! | TTGATGGCTGCAGTCGGTGT+TGG | + | tig0030624:16925-16944 | Msa1443960:intron | 55.0% |
! | GGGGAGGTGCATACCATTCA+TGG | - | tig0030624:16964-16983 | Msa1443960:intergenic | 55.0% |
TCCCGAGTGTAAATCTGGGG+AGG | - | tig0030624:16980-16999 | Msa1443960:intergenic | 55.0% | |
TACACTCGGGACGACAGTAC+TGG | + | tig0030624:16989-17008 | Msa1443960:CDS | 55.0% | |
GGGGAATCAGGCTGAAAAGC+AGG | - | tig0030624:17031-17050 | Msa1443960:intergenic | 55.0% | |
GACTGGTGAACATGCTCGTG+GGG | + | tig0030624:17108-17127 | Msa1443960:CDS | 55.0% | |
ACTGGTGAACATGCTCGTGG+GGG | + | tig0030624:17109-17128 | Msa1443960:CDS | 55.0% | |
CACCATCAGCCAACTCCTGA+TGG | - | tig0030624:17153-17172 | Msa1443960:intergenic | 55.0% | |
CCAACAGGTCCCAAAGCAGA+TGG | - | tig0030624:17923-17942 | Msa1443960:intergenic | 55.0% | |
!! | CCATCTGCTTTGGGACCTGT+TGG | + | tig0030624:17920-17939 | Msa1443960:CDS | 55.0% |
! | CGAACGACTGAAGCACCAAC+AGG | - | tig0030624:17938-17957 | Msa1443960:intergenic | 55.0% |
CGTGCTGCAGAGTTACTTCC+AGG | + | tig0030624:17956-17975 | Msa1443960:CDS | 55.0% | |
GCTGCAGAGTTACTTCCAGG+TGG | + | tig0030624:17959-17978 | Msa1443960:intron | 55.0% | |
AGAAACGAGGCAAACCCACC+TGG | - | tig0030624:17977-17996 | Msa1443960:intergenic | 55.0% | |
TCAGGACATGCCACAAGCCA+CGG | + | tig0030624:19301-19320 | Msa1443960:intron | 55.0% | |
ACATGCCACAAGCCACGGTA+AGG | + | tig0030624:19306-19325 | Msa1443960:intron | 55.0% | |
CATGCCACAAGCCACGGTAA+GGG | + | tig0030624:19307-19326 | Msa1443960:intron | 55.0% | |
CAATCCCTTACCGTGGCTTG+TGG | - | tig0030624:19314-19333 | Msa1443960:intergenic | 55.0% | |
!! | AAGGCTACCTGATGGTGGGT+TGG | + | tig0030624:19627-19646 | Msa1443960:intron | 55.0% |
TCAAGGACCAACCCACCATC+AGG | - | tig0030624:19637-19656 | Msa1443960:intergenic | 55.0% | |
AGCGGCTACAACCTTAGGGT+GGG | - | tig0030624:20388-20407 | Msa1443960:intergenic | 55.0% | |
CCTAGTCCCAAAGGCAGCAT+AGG | - | tig0030624:21319-21338 | Msa1443960:intergenic | 55.0% | |
!! | CCTATGCTGCCTTTGGGACT+AGG | + | tig0030624:21316-21335 | Msa1443960:intron | 55.0% |
ACGAGTCCCAAACATCAGGC+TGG | - | tig0030624:21931-21950 | Msa1443960:intergenic | 55.0% | |
GTGAGCAAGAGCAGCCACAT+GGG | + | tig0030624:22058-22077 | Msa1443960:intron | 55.0% | |
GTGGATATTGGGTGGGAGGT+TGG | - | tig0030624:22289-22308 | Msa1443960:intergenic | 55.0% | |
AGAGCTCGTACCGCTGAATG+TGG | - | tig0030624:22962-22981 | Msa1443960:intergenic | 55.0% | |
CATTCAGCGGTACGAGCTCT+TGG | + | tig0030624:22962-22981 | Msa1443960:CDS | 55.0% | |
TCCTCTCCTTGCTCCCCAAA+AGG | + | tig0030624:23378-23397 | Msa1443960:intron | 55.0% | |
CCTCTCCTTGCTCCCCAAAA+GGG | + | tig0030624:23379-23398 | Msa1443960:intron | 55.0% | |
!! | ACACACCCTTTTGGGGAGCA+AGG | - | tig0030624:23387-23406 | Msa1443960:intergenic | 55.0% |
!! | CAGTGCTCTGTGGGTTAGCT+AGG | - | tig0030624:23845-23864 | Msa1443960:intergenic | 55.0% |
CTGAAGGAGCAGTGCTCTGT+GGG | - | tig0030624:23854-23873 | Msa1443960:intergenic | 55.0% | |
TCTGAAGGAGCAGTGCTCTG+TGG | - | tig0030624:23855-23874 | Msa1443960:intergenic | 55.0% | |
CGTATGTGGCAAGGGTTCTG+TGG | + | tig0030624:24559-24578 | Msa1443960:intron | 55.0% | |
TCCATCGGAGCGGTTAGGAG+CGG | + | tig0030624:7750-7769 | Msa1443960:CDS | 60.0% | |
ACGCCGTAACTGCCGAAGAC+TGG | + | tig0030624:7845-7864 | Msa1443960:CDS | 60.0% | |
! | AGTAGCGGAGCTAGCGGAAG+CGG | - | tig0030624:7947-7966 | Msa1443960:intergenic | 60.0% |
CTAGCAGCTTCAGGGGCAAG+AGG | - | tig0030624:9657-9676 | Msa1443960:intergenic | 60.0% | |
GCCCCTGAAGCTGCTAGTGT+TGG | + | tig0030624:9660-9679 | Msa1443960:CDS | 60.0% | |
! | CAGGCAGCATCTGGGACCAA+AGG | + | tig0030624:10840-10859 | Msa1443960:intron | 60.0% |
! | GCAGCATCTGGGACCAAAGG+AGG | + | tig0030624:10843-10862 | Msa1443960:CDS | 60.0% |
! | AGGGCAGTTGGCCTGAATGC+CGG | + | tig0030624:10900-10919 | Msa1443960:CDS | 60.0% |
! | TTTGACGAGACTCGCCGGCT+TGG | + | tig0030624:11817-11836 | Msa1443960:CDS | 60.0% |
ACGCGGACAAGGACATCACC+CGG | - | tig0030624:12143-12162 | Msa1443960:intergenic | 60.0% | |
GTAGGAGCGGCTCATCGAGA+TGG | + | tig0030624:12506-12525 | Msa1443960:intron | 60.0% | |
!! | CACAGTGAGGGGCGTTAGGA+TGG | - | tig0030624:13513-13532 | Msa1443960:intergenic | 60.0% |
GGGCTTATGACAAGGGACGG+AGG | - | tig0030624:13932-13951 | Msa1443960:intergenic | 60.0% | |
GTTTGGGAGTTTGGAGGGGG+AGG | + | tig0030624:16344-16363 | Msa1443960:intron | 60.0% | |
!! | GAGGGAGGGAAGGGTTTTGG+AGG | + | tig0030624:16363-16382 | Msa1443960:intron | 60.0% |
GGAGGAGTCTGGAGGGCTTT+GGG | - | tig0030624:16543-16562 | Msa1443960:intergenic | 60.0% | |
AGGAGGAGTCTGGAGGGCTT+TGG | - | tig0030624:16544-16563 | Msa1443960:intergenic | 60.0% | |
ATGAGAGTGGAGGGCTTGGG+GGG | - | tig0030624:16627-16646 | Msa1443960:intergenic | 60.0% | |
!!! | GAGTTTTGAGGGGAGGGGAG+GGG | - | tig0030624:16705-16724 | Msa1443960:intergenic | 60.0% |
!!! | GGAGTTTTGAGGGGAGGGGA+GGG | - | tig0030624:16706-16725 | Msa1443960:intergenic | 60.0% |
CGTGGGGGAGATGTGTGTGA+AGG | + | tig0030624:17124-17143 | Msa1443960:CDS | 60.0% | |
!! | GGCTGATGGTGTCGCTAGCA+TGG | + | tig0030624:17162-17181 | Msa1443960:CDS | 60.0% |
TCAGAGCCGGCATTACGTCG+AGG | + | tig0030624:18547-18566 | Msa1443960:intron | 60.0% | |
CGCCCAAGCTCACCCAAATC+TGG | - | tig0030624:19174-19193 | Msa1443960:intergenic | 60.0% | |
CAGCGGCTACAACCTTAGGG+TGG | - | tig0030624:20389-20408 | Msa1443960:intergenic | 60.0% | |
GGTGAGCAAGAGCAGCCACA+TGG | + | tig0030624:22057-22076 | Msa1443960:intron | 60.0% | |
!! | CCCTTTTGGGGAGCAAGGAG+AGG | - | tig0030624:23382-23401 | Msa1443960:intergenic | 60.0% |
AGACTCGTGGCTTCCCGTTG+AGG | - | tig0030624:24876-24895 | Msa1443960:intergenic | 60.0% | |
TCCGCTCCTAACCGCTCCGA+TGG | - | tig0030624:7754-7773 | Msa1443960:intergenic | 65.0% | |
TCGGAGCGGTTAGGAGCGGA+CGG | + | tig0030624:7754-7773 | Msa1443960:CDS | 65.0% | |
!! | GTCGGTTTTCACGGCGGCGA+TGG | - | tig0030624:7788-7807 | Msa1443960:intergenic | 65.0% |
GCTTCCGCTAGCTCCGCTAC+TGG | + | tig0030624:7946-7965 | Msa1443960:CDS | 65.0% | |
GATTGGCAGGGCAGGGCAGT+TGG | + | tig0030624:10888-10907 | Msa1443960:CDS | 65.0% | |
! | GGGCAGTTGGCCTGAATGCC+GGG | + | tig0030624:10901-10920 | Msa1443960:CDS | 65.0% |
!! | GTGGCACAGTGAGGGGCGTT+AGG | - | tig0030624:13517-13536 | Msa1443960:intergenic | 65.0% |
GGAGTTTGGAGGGGGAGGGA+GGG | + | tig0030624:16349-16368 | Msa1443960:intron | 65.0% | |
TTTGGAGGGGGAGGGAGGGA+AGG | + | tig0030624:16353-16372 | Msa1443960:intron | 65.0% | |
TTGGAGGGGGAGGGAGGGAA+GGG | + | tig0030624:16354-16373 | Msa1443960:intron | 65.0% | |
! | GGGGAGGGAGGGAAGGGTTT+TGG | + | tig0030624:16360-16379 | Msa1443960:intron | 65.0% |
TTTGAGGGGAGGGGAGGGGA+GGG | - | tig0030624:16701-16720 | Msa1443960:intergenic | 65.0% | |
!! | TTTTGAGGGGAGGGGAGGGG+AGG | - | tig0030624:16702-16721 | Msa1443960:intergenic | 65.0% |
!!! | GGGAGTTTTGAGGGGAGGGG+AGG | - | tig0030624:16707-16726 | Msa1443960:intergenic | 65.0% |
!! | GGGACGACAGTACTGGCCTC+TGG | + | tig0030624:16996-17015 | Msa1443960:CDS | 65.0% |
GGGAGTTTGGAGGGGGAGGG+AGG | + | tig0030624:16348-16367 | Msa1443960:intron | 70.0% | |
TTGAGGGGAGGGGAGGGGAG+GGG | - | tig0030624:16700-16719 | Msa1443960:intergenic | 70.0% | |
! | GGGGAGGGGAGGGGAGGGGA+GGG | - | tig0030624:16691-16710 | Msa1443960:intergenic | 80.0% |
! | AGGGGAGGGGAGGGGAGGGG+AGG | - | tig0030624:16692-16711 | Msa1443960:intergenic | 80.0% |
! | GGGAGGGGAGGGGAGGGGAG+GGG | - | tig0030624:16690-16709 | Msa1443960:intergenic | 80.0% |
! | GGGGAGGGGAGGGGAGGGGA+GGG | - | tig0030624:16691-16710 | Msa1443960:intergenic | 80.0% |
! | AGGGGAGGGGAGGGGAGGGG+AGG | - | tig0030624:16692-16711 | Msa1443960:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0030624 | gene | 7517 | 25464 | 7517 | ID=Msa1443960;Name=Msa1443960 |
tig0030624 | mRNA | 7517 | 25464 | 7517 | ID=Msa1443960-mRNA-1;Parent=Msa1443960;Name=Msa1443960-mRNA-1;_AED=0.31;_eAED=0.31;_QI=225|0.87|0.92|0.96|1|1|25|456|1066 |
tig0030624 | exon | 7517 | 8027 | 7517 | ID=Msa1443960-mRNA-1:exon:14193;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 8125 | 8195 | 8125 | ID=Msa1443960-mRNA-1:exon:14194;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 9588 | 9722 | 9588 | ID=Msa1443960-mRNA-1:exon:14195;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 10261 | 10319 | 10261 | ID=Msa1443960-mRNA-1:exon:14196;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 10419 | 10455 | 10419 | ID=Msa1443960-mRNA-1:exon:14197;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 10843 | 10968 | 10843 | ID=Msa1443960-mRNA-1:exon:14198;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 11096 | 11185 | 11096 | ID=Msa1443960-mRNA-1:exon:14199;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 11796 | 11861 | 11796 | ID=Msa1443960-mRNA-1:exon:14200;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 11964 | 12020 | 11964 | ID=Msa1443960-mRNA-1:exon:14201;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 12107 | 12172 | 12107 | ID=Msa1443960-mRNA-1:exon:14202;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 12887 | 12994 | 12887 | ID=Msa1443960-mRNA-1:exon:14203;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 13717 | 13797 | 13717 | ID=Msa1443960-mRNA-1:exon:14204;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 14579 | 14628 | 14579 | ID=Msa1443960-mRNA-1:exon:14205;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 15002 | 15167 | 15002 | ID=Msa1443960-mRNA-1:exon:14206;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 16938 | 17444 | 16938 | ID=Msa1443960-mRNA-1:exon:14207;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 17588 | 17770 | 17588 | ID=Msa1443960-mRNA-1:exon:14208;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 17872 | 17977 | 17872 | ID=Msa1443960-mRNA-1:exon:14209;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 18304 | 18351 | 18304 | ID=Msa1443960-mRNA-1:exon:14210;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 18551 | 18721 | 18551 | ID=Msa1443960-mRNA-1:exon:14211;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 18823 | 18902 | 18823 | ID=Msa1443960-mRNA-1:exon:14212;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 20631 | 20858 | 20631 | ID=Msa1443960-mRNA-1:exon:14213;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 22540 | 22572 | 22540 | ID=Msa1443960-mRNA-1:exon:14214;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 22866 | 23023 | 22866 | ID=Msa1443960-mRNA-1:exon:14215;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 24299 | 24410 | 24299 | ID=Msa1443960-mRNA-1:exon:14216;Parent=Msa1443960-mRNA-1 |
tig0030624 | exon | 24832 | 25464 | 24832 | ID=Msa1443960-mRNA-1:exon:14217;Parent=Msa1443960-mRNA-1 |
tig0030624 | five_prime_UTR | 7517 | 7741 | 7517 | ID=Msa1443960-mRNA-1:five_prime_utr;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 7742 | 8027 | 7742 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 8125 | 8195 | 8125 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 9588 | 9722 | 9588 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 10261 | 10319 | 10261 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 10419 | 10455 | 10419 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 10843 | 10968 | 10843 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 11096 | 11185 | 11096 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 11796 | 11861 | 11796 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 11964 | 12020 | 11964 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 12107 | 12172 | 12107 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 12887 | 12994 | 12887 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 13717 | 13797 | 13717 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 14579 | 14628 | 14579 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 15002 | 15167 | 15002 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 16938 | 17444 | 16938 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 17588 | 17770 | 17588 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 17872 | 17977 | 17872 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 18304 | 18351 | 18304 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 18551 | 18721 | 18551 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 18823 | 18902 | 18823 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 20631 | 20858 | 20631 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 22540 | 22572 | 22540 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 22866 | 23023 | 22866 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 24299 | 24410 | 24299 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | CDS | 24832 | 25008 | 24832 | ID=Msa1443960-mRNA-1:cds;Parent=Msa1443960-mRNA-1 |
tig0030624 | three_prime_UTR | 25009 | 25464 | 25009 | ID=Msa1443960-mRNA-1:three_prime_utr;Parent=Msa1443960-mRNA-1 |
Gene Sequence |
Protein sequence |