Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377310 | XP_013460645.1 | 88.997 | 1127 | 36 | 5 | 1 | 1055 | 1 | 1111 | 0.0 | 1998 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377310 | sp|Q8RY22|DEGP7_ARATH | 65.600 | 1125 | 285 | 13 | 1 | 1051 | 1 | 1097 | 0.0 | 1405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377310 | A0A072UXY7 | 88.997 | 1127 | 36 | 5 | 1 | 1055 | 1 | 1111 | 0.0 | 2019 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0090400 | Msa1377310 | 0.817589 | 3.048993e-52 | -8.615850e-47 |
Msa1360060 | Msa1377310 | 0.828886 | 7.004420e-55 | -8.615850e-47 |
Msa1370840 | Msa1377310 | 0.803556 | 3.294734e-49 | -8.615850e-47 |
Msa1377310 | Msa1422420 | 0.847947 | 8.375574e-60 | -8.615850e-47 |
Msa1377310 | Msa1436590 | 0.804967 | 1.675313e-49 | -8.615850e-47 |
Msa1377310 | Msa1443960 | 0.972452 | 8.662199e-135 | -8.615850e-47 |
Msa0625190 | Msa1377310 | 0.805385 | 1.369673e-49 | -8.615850e-47 |
Msa0658240 | Msa1377310 | 0.847348 | 1.224502e-59 | -8.615850e-47 |
Msa0703050 | Msa1377310 | 0.813336 | 2.695292e-51 | -8.615850e-47 |
Msa0719950 | Msa1377310 | 0.841540 | 4.466219e-58 | -8.615850e-47 |
Msa0764830 | Msa1377310 | 0.801278 | 9.707341e-49 | -8.615850e-47 |
Msa0832320 | Msa1377310 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
Msa0137880 | Msa1377310 | 0.822356 | 2.474837e-53 | -8.615850e-47 |
Msa0174790 | Msa1377310 | 0.807807 | 4.220467e-50 | -8.615850e-47 |
Msa0225460 | Msa1377310 | 0.816618 | 5.039686e-52 | -8.615850e-47 |
Msa0225680 | Msa1377310 | 0.806462 | 8.131430e-50 | -8.615850e-47 |
Msa1269480 | Msa1377310 | 0.857764 | 1.306398e-62 | -8.615850e-47 |
Msa1299960 | Msa1377310 | 0.815409 | 9.383132e-52 | -8.615850e-47 |
Msa0368340 | Msa1377310 | 0.980132 | 1.613854e-149 | -8.615850e-47 |
Msa0461990 | Msa1377310 | 0.978904 | 8.220287e-147 | -8.615850e-47 |
Msa0474520 | Msa1377310 | 0.803200 | 3.905355e-49 | -8.615850e-47 |
Msa0481950 | Msa1377310 | 0.888607 | 5.080181e-73 | -8.615850e-47 |
Msa1019000 | Msa1377310 | 0.801831 | 7.479598e-49 | -8.615850e-47 |
Msa1019150 | Msa1377310 | 0.821452 | 4.008455e-53 | -8.615850e-47 |
Msa1030800 | Msa1377310 | 0.817197 | 3.736209e-52 | -8.615850e-47 |
Msa1037780 | Msa1377310 | 0.805072 | 1.592286e-49 | -8.615850e-47 |
Msa1081330 | Msa1377310 | 0.818827 | 1.599575e-52 | -8.615850e-47 |
Msa0267110 | Msa1377310 | 0.814405 | 1.566591e-51 | -8.615850e-47 |
Msa1119820 | Msa1377310 | 0.828569 | 8.358430e-55 | -8.615850e-47 |
Msa1119940 | Msa1377310 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
Msa1147740 | Msa1377310 | 0.822213 | 2.672205e-53 | -8.615850e-47 |
Msa1157820 | Msa1377310 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
Msa1218570 | Msa1377310 | 0.803916 | 2.773595e-49 | -8.615850e-47 |
Msa0483340 | Msa1377310 | 0.971230 | 7.737823e-133 | -8.615850e-47 |
Msa0547900 | Msa1377310 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
Msa0566560 | Msa1377310 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
Msa0576880 | Msa1377310 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
Msa0860750 | Msa1377310 | 0.870241 | 1.693596e-66 | -8.615850e-47 |
Msa0906610 | Msa1377310 | 0.803530 | 3.336605e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377310 | MtrunA17_Chr3g0111461 | 88.997 | 1127 | 36 | 5 | 1 | 1055 | 1 | 1111 | 0.0 | 2019 |
Msa1377310 | MtrunA17_Chr3g0111471 | 75.575 | 1130 | 178 | 12 | 1 | 1055 | 1 | 1107 | 0.0 | 1631 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1377310 | AT3G03380.1 | 65.600 | 1125 | 285 | 13 | 1 | 1051 | 1 | 1097 | 0.0 | 1405 |
Msa1377310 | AT3G03380.2 | 64.800 | 1125 | 261 | 12 | 1 | 1051 | 1 | 1064 | 0.0 | 1393 |
Find 308 sgRNAs with CRISPR-Local
Find 1224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTGCAGGTACATGATTT+TGG | 0.110519 | tig0019900:+9950 | Msa1377310:intron |
CGCAAAACCTGTCGCCTTAT+TGG | 0.141830 | tig0019900:-22926 | None:intergenic |
ACTAACTTGTAAGAAATAAT+TGG | 0.166372 | tig0019900:-14113 | None:intergenic |
ATCAAAGAGTTTAACTCTTT+TGG | 0.214898 | tig0019900:+13344 | Msa1377310:CDS |
TGAAGCAAGATTTACATTAT+TGG | 0.215192 | tig0019900:+25269 | Msa1377310:CDS |
GGAAATTGATCCACCGTTTC+AGG | 0.227919 | tig0019900:+8190 | Msa1377310:CDS |
AAGGAAGGGTCCAAGCTTTA+TGG | 0.235947 | tig0019900:+19228 | Msa1377310:CDS |
CTTTCAAAGGCTCGCAGTTT+TGG | 0.236510 | tig0019900:+21180 | Msa1377310:CDS |
TTACTGCCAGGTTTCAATTT+TGG | 0.247111 | tig0019900:+10621 | Msa1377310:intron |
ATTAAGTGATGTTTGGATTC+AGG | 0.252836 | tig0019900:+21203 | Msa1377310:CDS |
TTGTCTTGCTCCCGGCATTC+AGG | 0.255148 | tig0019900:-11281 | None:intergenic |
TTAATCCAGACACTGGAATT+TGG | 0.255950 | tig0019900:+25311 | Msa1377310:CDS |
GATTCCCCTTATTTATCATC+TGG | 0.256203 | tig0019900:+17410 | Msa1377310:CDS |
GAGTCTCGTCAAACCCTTTA+TGG | 0.262867 | tig0019900:-12175 | None:intergenic |
CAAGTATAGTCTCCAGTTTC+AGG | 0.265110 | tig0019900:-13272 | None:intergenic |
CAGTGGATAGTTGAAATTAA+TGG | 0.273425 | tig0019900:+24712 | Msa1377310:CDS |
CTGCCCTGCCAATCTATAAC+TGG | 0.276149 | tig0019900:-11249 | None:intergenic |
GCTTCTCCTGCCAGTGAAAC+TGG | 0.277699 | tig0019900:+12343 | Msa1377310:CDS |
ACCCGGTTCTAAATGTTTAT+AGG | 0.288386 | tig0019900:-12490 | None:intergenic |
AATATATCACACTCAAGATT+TGG | 0.288823 | tig0019900:+18022 | Msa1377310:CDS |
GCACAACTCGTACAATTAAT+TGG | 0.289573 | tig0019900:+23282 | Msa1377310:CDS |
CCTTGCGCTGCTTTAAATAT+AGG | 0.294907 | tig0019900:+19006 | Msa1377310:CDS |
GTGAAACTTATGTTGATAAA+TGG | 0.296158 | tig0019900:+11498 | Msa1377310:CDS |
CCTCCATCTTGTATGCTTGA+TGG | 0.296492 | tig0019900:+17963 | Msa1377310:CDS |
GGGACACCTCTTCTCATAAA+TGG | 0.298945 | tig0019900:+21099 | Msa1377310:CDS |
TTATACCCAGATGATAAATA+AGG | 0.303473 | tig0019900:-17416 | None:intergenic |
GTGTTGAAGTTGATTGCTTC+TGG | 0.313792 | tig0019900:+18696 | Msa1377310:CDS |
ACCTGGCTTATTGCATAAAT+AGG | 0.315397 | tig0019900:-21048 | None:intergenic |
CGTGCTGCAGAGTTACTTCC+AGG | 0.315859 | tig0019900:+18322 | Msa1377310:CDS |
AATCCAACACTAGCAGCTTC+AGG | 0.320166 | tig0019900:-10034 | None:intergenic |
TGTCGTCCCGAGTGTAAATC+TGG | 0.327044 | tig0019900:-17349 | None:intergenic |
GCTTTCCCAGTTGAAATTCC+TGG | 0.327424 | tig0019900:+18110 | Msa1377310:CDS |
TTATGCAATAAGCCAGGTTC+TGG | 0.328632 | tig0019900:+21053 | Msa1377310:CDS |
AATCTGGATCTGCGTCTTCC+AGG | 0.331141 | tig0019900:+25437 | Msa1377310:three_prime_UTR |
TTTGATTTACAGGCAGCATC+TGG | 0.333651 | tig0019900:+11201 | Msa1377310:intron |
ACCTCTCCAGGAATTTCAAC+TGG | 0.334389 | tig0019900:-18116 | None:intergenic |
TTGGTGTGGTTGTATAGTTC+AGG | 0.335309 | tig0019900:+23301 | Msa1377310:CDS |
GGAGATTCTGTTTATCTTGT+GGG | 0.336464 | tig0019900:+18934 | Msa1377310:CDS |
TATACCTCGTGGTACTCTTC+AGG | 0.338845 | tig0019900:+11532 | Msa1377310:CDS |
TCTTCCATTGAATGAGATTA+GGG | 0.349263 | tig0019900:-8098 | None:intergenic |
AATTATTTCTTACAAGTTAG+TGG | 0.350593 | tig0019900:+14115 | Msa1377310:CDS |
AGTTATAAAGCAATCGATTC+AGG | 0.354093 | tig0019900:+25595 | Msa1377310:three_prime_UTR |
GCAAAACCTGTCGCCTTATT+GGG | 0.360483 | tig0019900:-22925 | None:intergenic |
GTACTCTTGCTCGTTTAGAT+AGG | 0.368057 | tig0019900:+10647 | Msa1377310:CDS |
ATCATATGATCCATCTGCTT+TGG | 0.368564 | tig0019900:+18276 | Msa1377310:CDS |
GCAATAATTAAGAAATTTGC+TGG | 0.369760 | tig0019900:+15405 | Msa1377310:CDS |
CTTTGATTTGTTTAGGTGCC+AGG | 0.373312 | tig0019900:+12459 | Msa1377310:intron |
ATATTCACAAGCCAAATAAA+AGG | 0.375526 | tig0019900:-25770 | None:intergenic |
TTCTTGTGGGAACAGATGTT+AGG | 0.376049 | tig0019900:+23249 | Msa1377310:CDS |
AAAGCGTTGCAGACACGATT+TGG | 0.377897 | tig0019900:+25480 | Msa1377310:three_prime_UTR |
ATATATCACACTCAAGATTT+GGG | 0.378310 | tig0019900:+18023 | Msa1377310:CDS |
TTAACAAAAGAATCTATATC+TGG | 0.378431 | tig0019900:-24745 | None:intergenic |
CGATGCCAAATTCCAGTGTC+TGG | 0.379071 | tig0019900:-25316 | None:intergenic |
GGACCCACTTGATCCTCCTT+TGG | 0.379627 | tig0019900:-11226 | None:intergenic |
CATTACTCAATTCCTGAAAC+TGG | 0.386382 | tig0019900:+13260 | Msa1377310:CDS |
TATACCCAGATGATAAATAA+GGG | 0.389932 | tig0019900:-17415 | None:intergenic |
GAAGTTATTGAGCTTGATAC+TGG | 0.392056 | tig0019900:+19066 | Msa1377310:CDS |
CATTCAGCGGTACGAGCTCT+TGG | 0.395312 | tig0019900:+23329 | Msa1377310:CDS |
TAAGAAAGATTTACCTCTCC+AGG | 0.395372 | tig0019900:-18128 | None:intergenic |
ACAGTGAAATCGGAAGTTTC+TGG | 0.396526 | tig0019900:-14949 | None:intergenic |
GGCATTAAGTTTCTTCAAAA+GGG | 0.398088 | tig0019900:+11473 | Msa1377310:CDS |
AATATTGCTAACCTGCTGAT+AGG | 0.398598 | tig0019900:-14158 | None:intergenic |
ACTTCTAATATTCTCAGAAA+TGG | 0.398619 | tig0019900:-21138 | None:intergenic |
TCATATGATCCATCTGCTTT+GGG | 0.398966 | tig0019900:+18277 | Msa1377310:CDS |
CAAAGGAACAAACACAAATC+TGG | 0.399736 | tig0019900:+25421 | Msa1377310:three_prime_UTR |
AGGGCAGTTGGCCTGAATGC+CGG | 0.401499 | tig0019900:+11270 | Msa1377310:CDS |
ATCTTCCATTGAATGAGATT+AGG | 0.403986 | tig0019900:-8099 | None:intergenic |
CTTACCAGATGATGGGTTAA+TGG | 0.405008 | tig0019900:+17709 | Msa1377310:CDS |
TTGTCAAGAAAGACCCAATA+AGG | 0.405263 | tig0019900:+22912 | Msa1377310:CDS |
GATGATAAATAAGGGGAATC+AGG | 0.405976 | tig0019900:-17407 | None:intergenic |
TAAGGACAGTTCACCTCAAC+GGG | 0.406095 | tig0019900:+25227 | Msa1377310:CDS |
GGATTAGAAATCAGAGTTGT+TGG | 0.408848 | tig0019900:+10052 | Msa1377310:CDS |
AAACAAGACCACAGTGAAAT+CGG | 0.410128 | tig0019900:-14959 | None:intergenic |
TAGAGCATGGAGAATTTGTT+CGG | 0.410379 | tig0019900:+25203 | Msa1377310:CDS |
AGCCTATAAACATTTAGAAC+CGG | 0.413448 | tig0019900:+12488 | Msa1377310:CDS |
GGGCATTAAGTTTCTTCAAA+AGG | 0.415114 | tig0019900:+11472 | Msa1377310:CDS |
ATTTACATTATTGGCCTACA+TGG | 0.417060 | tig0019900:+25278 | Msa1377310:CDS |
GGTTTCCTCGGGTTCATTCA+AGG | 0.417899 | tig0019900:-17666 | None:intergenic |
GGGGAGGTGCATACCATTCA+TGG | 0.419296 | tig0019900:-17328 | None:intergenic |
GTCTACTCTTGTGATGTTTG+AGG | 0.422231 | tig0019900:+17790 | Msa1377310:CDS |
CTTGTTTATGTGACAGAACC+AGG | 0.423140 | tig0019900:+14975 | Msa1377310:CDS |
CAGTTATAGATTGGCAGGGC+AGG | 0.424567 | tig0019900:+11250 | Msa1377310:CDS |
AAGATCATATCTGGTGCAAA+TGG | 0.425516 | tig0019900:+21078 | Msa1377310:CDS |
GGGCAGTTGGCCTGAATGCC+GGG | 0.425575 | tig0019900:+11271 | Msa1377310:CDS |
AGGAAGGGTCCAAGCTTTAT+GGG | 0.425827 | tig0019900:+19229 | Msa1377310:CDS |
ACGTTACAGAGCGACCAATA+TGG | 0.425968 | tig0019900:+19044 | Msa1377310:CDS |
GTTCTGGACAAGATCATATC+TGG | 0.426731 | tig0019900:+21069 | Msa1377310:CDS |
CTTACTGGATCTCTATATAT+CGG | 0.430813 | tig0019900:-8549 | None:intergenic |
AAGCTCAATAACTTCCATAT+TGG | 0.431622 | tig0019900:-19058 | None:intergenic |
GATGTCCTTGTCCGCGTCAA+TGG | 0.432632 | tig0019900:+12513 | Msa1377310:CDS |
TCGCCAGTCTTCGGCAGTTA+CGG | 0.434795 | tig0019900:-8219 | None:intergenic |
CTAACTTGTAAGAAATAATT+GGG | 0.437535 | tig0019900:-14112 | None:intergenic |
TATACACCATGACCCTCTTC+AGG | 0.438139 | tig0019900:-23359 | None:intergenic |
ATTCCCCTTATTTATCATCT+GGG | 0.441332 | tig0019900:+17411 | Msa1377310:CDS |
TGAATGAGCAGAGTATAGTA+TGG | 0.446183 | tig0019900:+25373 | Msa1377310:exon |
TATTGAATTACAAATTGAAA+GGG | 0.447762 | tig0019900:+13314 | Msa1377310:CDS |
GTCCCCAGTTATAGATTGGC+AGG | 0.449405 | tig0019900:+11245 | Msa1377310:CDS |
CCATCTGCTTTGGGACCTGT+TGG | 0.452644 | tig0019900:+18286 | Msa1377310:CDS |
TGCAACATTATTTAACCCAT+TGG | 0.456329 | tig0019900:+25643 | Msa1377310:three_prime_UTR |
GTATAAAGATGTTGGAAGTC+TGG | 0.456649 | tig0019900:+17433 | Msa1377310:CDS |
GTACCACGAGGTATAGAAAC+TGG | 0.457062 | tig0019900:-11524 | None:intergenic |
CAGTTATTTCTAAGCTATCA+AGG | 0.458352 | tig0019900:+15460 | Msa1377310:CDS |
TGAAATTTCAAAGTATCAAA+GGG | 0.467345 | tig0019900:-25803 | None:intergenic |
ACGCCGTAACTGCCGAAGAC+TGG | 0.470258 | tig0019900:+8216 | Msa1377310:CDS |
ACGAGAGCATAATTGTGAAC+AGG | 0.472971 | tig0019900:-18253 | None:intergenic |
ATGAAATTTCAAAGTATCAA+AGG | 0.474327 | tig0019900:-25804 | None:intergenic |
ATGGGGAAGCTTCTCTACTC+AGG | 0.475203 | tig0019900:+19247 | Msa1377310:CDS |
AGGAGATTCTGTTTATCTTG+TGG | 0.476173 | tig0019900:+18933 | Msa1377310:CDS |
TAAACCCTAATCTCATTCAA+TGG | 0.477556 | tig0019900:+8094 | Msa1377310:exon |
GTTGATGATTTATCAGCTGA+TGG | 0.478944 | tig0019900:+17626 | Msa1377310:CDS |
TTCTCATAAATGGTGTCAAA+AGG | 0.479435 | tig0019900:+21109 | Msa1377310:CDS |
ATCCAACACTAGCAGCTTCA+GGG | 0.479736 | tig0019900:-10033 | None:intergenic |
AACAAGCATTCCAGTTTCAC+TGG | 0.481103 | tig0019900:-12353 | None:intergenic |
TTATCCAACATTACTTTCAA+AGG | 0.481576 | tig0019900:+21167 | Msa1377310:CDS |
TACTCTTGCTCGTTTAGATA+GGG | 0.483042 | tig0019900:+10648 | Msa1377310:CDS |
AGAGCATGGAGAATTTGTTC+GGG | 0.483059 | tig0019900:+25204 | Msa1377310:CDS |
ATGGAGAATTTGTTCGGGTA+AGG | 0.483956 | tig0019900:+25209 | Msa1377310:CDS |
TGTTTATAGGCTGGACCACC+TGG | 0.485802 | tig0019900:-12477 | None:intergenic |
GCCCCTGAAGCTGCTAGTGT+TGG | 0.487171 | tig0019900:+10031 | Msa1377310:CDS |
TGCACTTGTTGTCTTGCTCC+CGG | 0.488223 | tig0019900:-11289 | None:intergenic |
GAAGATCCATCGGAGCGGTT+AGG | 0.488908 | tig0019900:+8116 | Msa1377310:CDS |
AACATAGCTTCAGCAACAAC+AGG | 0.489164 | tig0019900:-8498 | None:intergenic |
ATTGGCCTACATGGGAATTG+AGG | 0.489182 | tig0019900:+25287 | Msa1377310:CDS |
AGTAGCGGAGCTAGCGGAAG+CGG | 0.489426 | tig0019900:-8315 | None:intergenic |
TAGTCCATTAACCCATCATC+TGG | 0.489512 | tig0019900:-17713 | None:intergenic |
GGTTCTAAATGTTTATAGGC+TGG | 0.489615 | tig0019900:-12486 | None:intergenic |
GAATCTCCTCGACGTAATGC+CGG | 0.489720 | tig0019900:-18919 | None:intergenic |
ATTTCCTAGAGGTTGCTTGA+AGG | 0.491093 | tig0019900:-18969 | None:intergenic |
CGAGCCTTTGAAAGTAATGT+TGG | 0.492042 | tig0019900:-21171 | None:intergenic |
AAAGAATCTATATCTGGAGT+TGG | 0.495811 | tig0019900:-24739 | None:intergenic |
TGCTTCAATGTTAAGACTCG+TGG | 0.495889 | tig0019900:-25253 | None:intergenic |
TCATCTGGGTATAAAGATGT+TGG | 0.495936 | tig0019900:+17425 | Msa1377310:CDS |
CGAGAGGTTGAACTTCTTGT+GGG | 0.496686 | tig0019900:+23236 | Msa1377310:CDS |
TCAGGTGCCTTACCAGATGA+TGG | 0.498142 | tig0019900:+17701 | Msa1377310:CDS |
ATACGAAGAACGACGACAGC+AGG | 0.498546 | tig0019900:-8263 | None:intergenic |
CCAACCTCTTTCCTATCAGC+AGG | 0.498782 | tig0019900:+14147 | Msa1377310:CDS |
TCCTATTTATGCAATAAGCC+AGG | 0.500296 | tig0019900:+21047 | Msa1377310:CDS |
AACGGGTGAAGTGTTTATGC+AGG | 0.501577 | tig0019900:-7960 | None:intergenic |
AGCATTCCAGTTTCACTGGC+AGG | 0.501597 | tig0019900:-12349 | None:intergenic |
CTTGGATTTCTTCCTGAAGA+GGG | 0.502719 | tig0019900:+23347 | Msa1377310:CDS |
ATATGATATAATTAACCAAT+GGG | 0.502747 | tig0019900:-25658 | None:intergenic |
GGGGAATCAGGCTGAAAAGC+AGG | 0.502798 | tig0019900:-17395 | None:intergenic |
GGGAGTCCTGTACATAGATA+TGG | 0.505764 | tig0019900:+24676 | Msa1377310:CDS |
TCTTGGATTTCTTCCTGAAG+AGG | 0.506242 | tig0019900:+23346 | Msa1377310:CDS |
GCTTCCGCTAGCTCCGCTAC+TGG | 0.507281 | tig0019900:+8317 | Msa1377310:CDS |
AAGGGGTGCACGAGTACCAT+TGG | 0.507706 | tig0019900:+15479 | Msa1377310:CDS |
TCTTGTGGGAACAGATGTTA+GGG | 0.508227 | tig0019900:+23250 | Msa1377310:CDS |
AATCGCCATGTTGTTAAGCC+TGG | 0.508229 | tig0019900:+8377 | Msa1377310:CDS |
TATTGGTCGCTCTGTAACGT+GGG | 0.509557 | tig0019900:-19041 | None:intergenic |
CAATTCACAGGTGGTGTCAT+GGG | 0.510151 | tig0019900:+24656 | Msa1377310:intron |
ATATTGAATTACAAATTGAA+AGG | 0.510770 | tig0019900:+13313 | Msa1377310:CDS |
TACACTCGGGACGACAGTAC+TGG | 0.513948 | tig0019900:+17356 | Msa1377310:CDS |
CCAATTCACAGGTGGTGTCA+TGG | 0.514670 | tig0019900:+24655 | Msa1377310:intron |
GTGGGTCCCCAGTTATAGAT+TGG | 0.515056 | tig0019900:+11241 | Msa1377310:CDS |
GGGACGACAGTACTGGCCTC+TGG | 0.515130 | tig0019900:+17363 | Msa1377310:CDS |
TGTTCACCAGTCAAAGAACT+TGG | 0.515909 | tig0019900:-17464 | None:intergenic |
GATTGGCAGGGCAGGGCAGT+TGG | 0.516452 | tig0019900:+11258 | Msa1377310:CDS |
ACGAGAGGTTGAACTTCTTG+TGG | 0.517421 | tig0019900:+23235 | Msa1377310:CDS |
AACTTGTCATGTGTCAATCA+TGG | 0.518518 | tig0019900:-25576 | None:intergenic |
TTTGACGAGACTCGCCGGCT+TGG | 0.519580 | tig0019900:+12185 | Msa1377310:CDS |
AGAAGCTTCCCCATAAAGCT+TGG | 0.519920 | tig0019900:-19238 | None:intergenic |
TTGGCATCGTAATGTAATCA+AGG | 0.520326 | tig0019900:+25330 | Msa1377310:CDS |
ATTTAAAGCAGCGCAAGGAT+TGG | 0.520476 | tig0019900:-19001 | None:intergenic |
CCCAGTTGAAATTCCTGGAG+AGG | 0.522398 | tig0019900:+18115 | Msa1377310:CDS |
TTGACACCATTTATGAGAAG+AGG | 0.522991 | tig0019900:-21105 | None:intergenic |
CAAATTTCTTAATTATTGCA+TGG | 0.526668 | tig0019900:-15401 | None:intergenic |
TTGATGGCTGCAGTCGGTGT+TGG | 0.526740 | tig0019900:+17292 | Msa1377310:intron |
ACAGATGTTAGGGATGGAAA+TGG | 0.527100 | tig0019900:+23260 | Msa1377310:CDS |
GAAGTGTGTGTTGTCAACTA+TGG | 0.529942 | tig0019900:-8018 | None:intergenic |
TCTCACGACAATGGATCTGA+TGG | 0.530429 | tig0019900:+17584 | Msa1377310:CDS |
CCTCTCCAGGAATTTCAACT+GGG | 0.531113 | tig0019900:-18115 | None:intergenic |
AGATCATATCTGGTGCAAAT+GGG | 0.532000 | tig0019900:+21079 | Msa1377310:CDS |
TCCGCTCCTAACCGCTCCGA+TGG | 0.532349 | tig0019900:-8122 | None:intergenic |
AGTTATTTCTAAGCTATCAA+GGG | 0.534850 | tig0019900:+15461 | Msa1377310:CDS |
CGAACGACTGAAGCACCAAC+AGG | 0.535120 | tig0019900:-18301 | None:intergenic |
ATCATGGCAATGCTCAATCA+TGG | 0.535756 | tig0019900:-25560 | None:intergenic |
GACTGGTGAACATGCTCGTG+GGG | 0.536217 | tig0019900:+17475 | Msa1377310:CDS |
TCTCTATATATCGGATGCAC+TGG | 0.538307 | tig0019900:-8540 | None:intergenic |
TGTGTGTGAAGGTAACCATC+AGG | 0.538947 | tig0019900:+17502 | Msa1377310:CDS |
TGCCCTGCCAATCTATAACT+GGG | 0.539312 | tig0019900:-11248 | None:intergenic |
AAGGGTTTGACGAGACTCGC+CGG | 0.539321 | tig0019900:+12180 | Msa1377310:CDS |
TACAGACCATATCTATGTAC+AGG | 0.540265 | tig0019900:-24682 | None:intergenic |
CGACAGCAGGAACGACTTTG+CGG | 0.540830 | tig0019900:-8250 | None:intergenic |
AGACTCGTGGCTTCCCGTTG+AGG | 0.541171 | tig0019900:-25240 | None:intergenic |
TTTCTTCCTGAAGAGGGTCA+TGG | 0.542233 | tig0019900:+23353 | Msa1377310:CDS |
CATTAACCCATCATCTGGTA+AGG | 0.544338 | tig0019900:-17708 | None:intergenic |
ATATGATCTTGTCCAGAACC+TGG | 0.546858 | tig0019900:-21065 | None:intergenic |
AGTTATAGATTGGCAGGGCA+GGG | 0.546894 | tig0019900:+11251 | Msa1377310:CDS |
GAAGCCTTCAAGCAACCTCT+AGG | 0.547159 | tig0019900:+18965 | Msa1377310:CDS |
GTCGTCCCGAGTGTAAATCT+GGG | 0.547554 | tig0019900:-17348 | None:intergenic |
CACCTCCCCAGATTTACACT+CGG | 0.550369 | tig0019900:+17342 | Msa1377310:CDS |
AGTCGTCCAAGTTCTTTGAC+TGG | 0.550800 | tig0019900:+17458 | Msa1377310:CDS |
TCGTGAGATACACACTCTAA+AGG | 0.551548 | tig0019900:-17569 | None:intergenic |
AGATATATGCTCTTTAAAGC+AGG | 0.551939 | tig0019900:+15369 | Msa1377310:intron |
CCTCAGAAGTGAGACAGAGC+AGG | 0.552016 | tig0019900:+12208 | Msa1377310:CDS |
GAAAGACCCAATAAGGCGAC+AGG | 0.555127 | tig0019900:+22919 | Msa1377310:CDS |
TTCTTAATTATTGCATGGCG+AGG | 0.557029 | tig0019900:-15396 | None:intergenic |
TTGACTGGTGAACATGCTCG+TGG | 0.557432 | tig0019900:+17473 | Msa1377310:CDS |
CTGTTCCAGCTTAAATTCAG+TGG | 0.558079 | tig0019900:+20988 | Msa1377310:intron |
TATATGATATAATTAACCAA+TGG | 0.558697 | tig0019900:-25659 | None:intergenic |
ATCTAAACGAGCAAGAGTAC+CGG | 0.558820 | tig0019900:-10644 | None:intergenic |
TTGAGGTTTAATCCAGACAC+TGG | 0.562805 | tig0019900:+25304 | Msa1377310:CDS |
CTTCACCATTGACGCGGACA+AGG | 0.562871 | tig0019900:-12518 | None:intergenic |
AATTTCCATGGATAAGTCGT+CGG | 0.563097 | tig0019900:-8174 | None:intergenic |
ACAACATACTTCTTATAGTG+AGG | 0.563470 | tig0019900:-10676 | None:intergenic |
CTGATGGGATAGTCAAGAAA+CGG | 0.564999 | tig0019900:+17600 | Msa1377310:CDS |
AACCATCAGGAGTTGGCTGA+TGG | 0.567235 | tig0019900:+17515 | Msa1377310:CDS |
CCAACAGGTCCCAAAGCAGA+TGG | 0.568297 | tig0019900:-18286 | None:intergenic |
CTAACCTGCTGATAGGAAAG+AGG | 0.568607 | tig0019900:-14151 | None:intergenic |
TTGATTTACAGGCAGCATCT+GGG | 0.572001 | tig0019900:+11202 | Msa1377310:intron |
ATTGAATTACAAATTGAAAG+GGG | 0.572224 | tig0019900:+13315 | Msa1377310:CDS |
AGTCAAAGAACTTGGACGAC+TGG | 0.574850 | tig0019900:-17456 | None:intergenic |
TTTACATTATTGGCCTACAT+GGG | 0.577146 | tig0019900:+25279 | Msa1377310:CDS |
CCTGCTGATAGGAAAGAGGT+TGG | 0.578359 | tig0019900:-14147 | None:intergenic |
CACCATCAGCCAACTCCTGA+TGG | 0.579029 | tig0019900:-17517 | None:intergenic |
TGACTGGTGAACATGCTCGT+GGG | 0.581266 | tig0019900:+17474 | Msa1377310:CDS |
TTTAGAAATTGTATAGCACT+AGG | 0.581734 | tig0019900:-9989 | None:intergenic |
GGCTGATGGTGTCGCTAGCA+TGG | 0.582214 | tig0019900:+17529 | Msa1377310:CDS |
TCATAATTGAAACACACGAA+TGG | 0.582698 | tig0019900:+7887 | Msa1377310:five_prime_UTR |
GAAAACCGACGACTTATCCA+TGG | 0.582980 | tig0019900:+8169 | Msa1377310:CDS |
CCTATATTTAAAGCAGCGCA+AGG | 0.583319 | tig0019900:-19006 | None:intergenic |
AAACGGTGGATCAATTTCCA+TGG | 0.583469 | tig0019900:-8186 | None:intergenic |
GATGGGTTAATGGACTATCA+AGG | 0.585317 | tig0019900:+17719 | Msa1377310:CDS |
ATATTGGTCGCTCTGTAACG+TGG | 0.586478 | tig0019900:-19042 | None:intergenic |
AATATTCTCAGAAATGGCAT+AGG | 0.587167 | tig0019900:-21132 | None:intergenic |
TGCTAACAGATGAACAAGGA+AGG | 0.588657 | tig0019900:+19213 | Msa1377310:CDS |
TTAAACCTCAATTCCCATGT+AGG | 0.589505 | tig0019900:-25292 | None:intergenic |
TCTCACTTCTGAGGCCAAGC+CGG | 0.590055 | tig0019900:-12199 | None:intergenic |
TCATTCAATGGAAGATCCAT+CGG | 0.590583 | tig0019900:+8106 | Msa1377310:exon |
CCTTTGCTACTGCATACGTA+GGG | 0.590751 | tig0019900:-25404 | None:intergenic |
AGAGTTGTTGGAAATGATAG+TGG | 0.591242 | tig0019900:+10064 | Msa1377310:CDS |
GCATTAAGTTTCTTCAAAAG+GGG | 0.591312 | tig0019900:+11474 | Msa1377310:CDS |
CAGGCAGCATCTGGGACCAA+AGG | 0.592331 | tig0019900:+11210 | Msa1377310:intron |
GGGACCAAAGGAGGATCAAG+TGG | 0.593956 | tig0019900:+11222 | Msa1377310:CDS |
AGAGCTCGTACCGCTGAATG+TGG | 0.595646 | tig0019900:-23326 | None:intergenic |
CAGGTGCCTTACCAGATGAT+GGG | 0.597439 | tig0019900:+17702 | Msa1377310:CDS |
ATTGGAGTATATAAGCTATG+TGG | 0.598011 | tig0019900:+15497 | Msa1377310:CDS |
CTAGCAGCTTCAGGGGCAAG+AGG | 0.601641 | tig0019900:-10025 | None:intergenic |
ACTCGTACAATTAATTGGTG+TGG | 0.601695 | tig0019900:+23287 | Msa1377310:CDS |
TGACAGTTGATCGCCATGAA+TGG | 0.603508 | tig0019900:+17315 | Msa1377310:CDS |
GCCTATAAACATTTAGAACC+GGG | 0.604979 | tig0019900:+12489 | Msa1377310:CDS |
CAGAAGATCATCAATTCGTG+AGG | 0.607507 | tig0019900:+21019 | Msa1377310:CDS |
GTAAGGACAGTTCACCTCAA+CGG | 0.607880 | tig0019900:+25226 | Msa1377310:CDS |
GTTATTTCTAAGCTATCAAG+GGG | 0.612565 | tig0019900:+15462 | Msa1377310:CDS |
TAACTGATATTAGTTCCTCA+AGG | 0.615980 | tig0019900:-15443 | None:intergenic |
ATAAAGCAATCGATTCAGGC+TGG | 0.618393 | tig0019900:+25599 | Msa1377310:three_prime_UTR |
AAAAGATAGCAACACATCAG+AGG | 0.620185 | tig0019900:-18084 | None:intergenic |
TCCTTTGCTACTGCATACGT+AGG | 0.620314 | tig0019900:-25405 | None:intergenic |
AGTGACTGATGCATTTGCTG+TGG | 0.620386 | tig0019900:-17753 | None:intergenic |
GCAGCATCTGGGACCAAAGG+AGG | 0.620601 | tig0019900:+11213 | Msa1377310:CDS |
GAATTACAAATTGAAAGGGG+TGG | 0.622224 | tig0019900:+13318 | Msa1377310:CDS |
TGTGGATCGTCATCGAAGGA+AGG | 0.622458 | tig0019900:+15515 | Msa1377310:CDS |
CTCACGACAATGGATCTGAT+GGG | 0.623764 | tig0019900:+17585 | Msa1377310:CDS |
ACATAGCTTATATACTCCAA+TGG | 0.625265 | tig0019900:-15495 | None:intergenic |
ACACCATCAAGCATACAAGA+TGG | 0.625568 | tig0019900:-17966 | None:intergenic |
GAGTGTGTATCTCACGACAA+TGG | 0.625621 | tig0019900:+17575 | Msa1377310:CDS |
TCCATCGGAGCGGTTAGGAG+CGG | 0.625998 | tig0019900:+8121 | Msa1377310:CDS |
AGAAGATCATCAATTCGTGA+GGG | 0.627156 | tig0019900:+21020 | Msa1377310:CDS |
TGTTGGCAGGAACTAGAGCA+TGG | 0.627193 | tig0019900:+25190 | Msa1377310:intron |
CCTGCTCTGTCTCACTTCTG+AGG | 0.628127 | tig0019900:-12208 | None:intergenic |
TCCAACACTAGCAGCTTCAG+GGG | 0.629636 | tig0019900:-10032 | None:intergenic |
TGATTTGTTTAGGTGCCAGG+TGG | 0.631499 | tig0019900:+12462 | Msa1377310:intron |
TGAAGGTAACCATCAGGAGT+TGG | 0.632098 | tig0019900:+17508 | Msa1377310:CDS |
AAGATCATCAATTCGTGAGG+GGG | 0.632531 | tig0019900:+21022 | Msa1377310:CDS |
AACTTACTTCACCATTGACG+CGG | 0.632906 | tig0019900:-12524 | None:intergenic |
GTGGGAACAGATGTTAGGGA+TGG | 0.634758 | tig0019900:+23254 | Msa1377310:CDS |
ACCTCCCCAGATTTACACTC+GGG | 0.636427 | tig0019900:+17343 | Msa1377310:CDS |
TCGGAGCGGTTAGGAGCGGA+CGG | 0.637278 | tig0019900:+8125 | Msa1377310:CDS |
TGAAACTGGAATGCTTGTTG+TGG | 0.638801 | tig0019900:+12357 | Msa1377310:CDS |
TCCCGAGTGTAAATCTGGGG+AGG | 0.639469 | tig0019900:-17344 | None:intergenic |
ATGGTCTGTATGCTCTTCAG+TGG | 0.643705 | tig0019900:+24695 | Msa1377310:CDS |
GCTATGTGGATCGTCATCGA+AGG | 0.645072 | tig0019900:+15511 | Msa1377310:CDS |
CCCTACGTATGCAGTAGCAA+AGG | 0.645363 | tig0019900:+25404 | Msa1377310:three_prime_UTR |
TGGAAATGATAGTGGTGAGA+AGG | 0.645560 | tig0019900:+10072 | Msa1377310:CDS |
GCTTACCAGGCTTAACAACA+TGG | 0.646259 | tig0019900:-8382 | None:intergenic |
TCCCCAGTTATAGATTGGCA+GGG | 0.646955 | tig0019900:+11246 | Msa1377310:CDS |
ATACCCAGATGATAAATAAG+GGG | 0.647293 | tig0019900:-17414 | None:intergenic |
GGAAGGGTCCAAGCTTTATG+GGG | 0.647869 | tig0019900:+19230 | Msa1377310:CDS |
GCCCTGCCAATCTATAACTG+GGG | 0.648189 | tig0019900:-11247 | None:intergenic |
AAAACCAGTAGCGGAGCTAG+CGG | 0.648543 | tig0019900:-8321 | None:intergenic |
GTCATGGTGTATACGTGGCA+AGG | 0.651209 | tig0019900:+23369 | Msa1377310:CDS |
ATCAACGACAAAACCAGTAG+CGG | 0.653355 | tig0019900:-8330 | None:intergenic |
GCTAACAGATGAACAAGGAA+GGG | 0.658389 | tig0019900:+19214 | Msa1377310:CDS |
AATGCTTGTTGTGGAATCTG+TGG | 0.658806 | tig0019900:+12366 | Msa1377310:CDS |
AAGCGCTTCATCACTCGACG+TGG | 0.662276 | tig0019900:+7992 | Msa1377310:five_prime_UTR |
ATTGGTCGCTCTGTAACGTG+GGG | 0.662916 | tig0019900:-19040 | None:intergenic |
GTGATTTGTCTAGGGACGAG+AGG | 0.665813 | tig0019900:+23220 | Msa1377310:intron |
GGTAACAACTGATTTCCTAG+AGG | 0.669880 | tig0019900:-18980 | None:intergenic |
GAAGATCATCAATTCGTGAG+GGG | 0.671912 | tig0019900:+21021 | Msa1377310:CDS |
AGTTCAGGATCCACATTCAG+CGG | 0.672282 | tig0019900:+23316 | Msa1377310:CDS |
TTGTTTATGTGACAGAACCA+GGG | 0.674020 | tig0019900:+14976 | Msa1377310:CDS |
TATGTCCTTGAATGAACCCG+AGG | 0.680888 | tig0019900:+17661 | Msa1377310:CDS |
CCATCAAGCATACAAGATGG+AGG | 0.681025 | tig0019900:-17963 | None:intergenic |
TCGTCCCGAGTGTAAATCTG+GGG | 0.682855 | tig0019900:-17347 | None:intergenic |
ACGCGGACAAGGACATCACC+CGG | 0.688023 | tig0019900:-12507 | None:intergenic |
TGCTCATTCATACAGAACTG+CGG | 0.688452 | tig0019900:-25360 | None:intergenic |
AAGCAGGCTTAGCAATCCAG+AGG | 0.690606 | tig0019900:-17379 | None:intergenic |
GGACCAAAGGAGGATCAAGT+GGG | 0.691475 | tig0019900:+11223 | Msa1377310:CDS |
TCAGAGCCGGCATTACGTCG+AGG | 0.694756 | tig0019900:+18913 | Msa1377310:intron |
TGAAGAAATATCTTGCCTTG+AGG | 0.697385 | tig0019900:+15428 | Msa1377310:CDS |
AGAGGGTCATGGTGTATACG+TGG | 0.702462 | tig0019900:+23364 | Msa1377310:CDS |
AGAAACTTCCGATTTCACTG+TGG | 0.714966 | tig0019900:+14951 | Msa1377310:CDS |
ATGCCAGTTTCTATACCTCG+TGG | 0.733202 | tig0019900:+11521 | Msa1377310:CDS |
TTTGTCGTTGATAAACGACG+TGG | 0.739358 | tig0019900:+8341 | Msa1377310:CDS |
ACTGGTGAACATGCTCGTGG+GGG | 0.740757 | tig0019900:+17476 | Msa1377310:CDS |
CAATGGAAGATCCATCGGAG+CGG | 0.747860 | tig0019900:+8111 | Msa1377310:exon |
GGTGTGCTAACAGATGAACA+AGG | 0.776902 | tig0019900:+19209 | Msa1377310:CDS |
CAAACCTGAAGAGTACCACG+AGG | 0.796613 | tig0019900:-11536 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATGAAAAATATACAT+GGG | + | tig0019900:9390-9409 | Msa1377310:intron | 10.0% |
!!! | AAATTCTATAGTAATTATTT+TGG | + | tig0019900:9824-9843 | Msa1377310:intron | 10.0% |
!!! | TCTACAATTATTAATTATTT+TGG | + | tig0019900:10595-10614 | Msa1377310:intron | 10.0% |
!! | TGTTAAAAATTAAAATTAGA+AGG | - | tig0019900:10905-10924 | None:intergenic | 10.0% |
!! | TATCTAAAGAAAAATTATAA+TGG | - | tig0019900:12408-12427 | None:intergenic | 10.0% |
!!! | AAAATGCAAAAAAAATTTTT+TGG | - | tig0019900:12576-12595 | None:intergenic | 10.0% |
!!! | TTTATTTATGTAATTTTATG+AGG | - | tig0019900:13572-13591 | None:intergenic | 10.0% |
!! | CTAAAAAAATTTGATAAAAT+TGG | - | tig0019900:13629-13648 | None:intergenic | 10.0% |
!!! | TTTTTAATGGTAAATTAAAT+AGG | + | tig0019900:14462-14481 | Msa1377310:intron | 10.0% |
!!! | TTTTAATGGTAAATTAAATA+GGG | + | tig0019900:14463-14482 | Msa1377310:intron | 10.0% |
!!! | AAAATTAGTTTCTAATATTA+GGG | - | tig0019900:15867-15886 | None:intergenic | 10.0% |
!!! | TAAAATTAGTTTCTAATATT+AGG | - | tig0019900:15868-15887 | None:intergenic | 10.0% |
!!! | TAATATTAGAAACTAATTTT+AGG | + | tig0019900:15867-15886 | Msa1377310:intron | 10.0% |
!! | AATATAATAAAAGTTAGAAA+AGG | - | tig0019900:15957-15976 | None:intergenic | 10.0% |
!! | GGATAATAAATAAATAAATT+GGG | + | tig0019900:18497-18516 | Msa1377310:intron | 10.0% |
!! | TAACTTTAATTAATAAAGAA+GGG | + | tig0019900:20542-20561 | Msa1377310:intron | 10.0% |
!! | TAAAGAAACTATTAAAATTT+AGG | - | tig0019900:20923-20942 | None:intergenic | 10.0% |
!!! | TTTTTCAGTATAATTATTAT+TGG | - | tig0019900:22489-22508 | None:intergenic | 10.0% |
!!! | ATTTTATTTTTTCATGATTA+TGG | - | tig0019900:25696-25715 | None:intergenic | 10.0% |
!!! | ACTAATATAACTAGTTTATA+AGG | + | tig0019900:9356-9375 | Msa1377310:intron | 15.0% |
!!! | CTAATATAACTAGTTTATAA+GGG | + | tig0019900:9357-9376 | Msa1377310:intron | 15.0% |
!! | GTAATAATGAAAAATATACA+TGG | + | tig0019900:9389-9408 | Msa1377310:intron | 15.0% |
!!! | TGAGTTTTTATATTATACAA+GGG | - | tig0019900:9764-9783 | None:intergenic | 15.0% |
!!! | ATGAGTTTTTATATTATACA+AGG | - | tig0019900:9765-9784 | None:intergenic | 15.0% |
!! | TAATATAAAAACTCATATTG+TGG | + | tig0019900:9769-9788 | Msa1377310:intron | 15.0% |
!! | AATAATTGTAGAAAATTATC+AGG | - | tig0019900:10587-10606 | None:intergenic | 15.0% |
!!! | TCTTTTTTATGTATATGATA+TGG | + | tig0019900:10715-10734 | Msa1377310:intron | 15.0% |
!!! | TATTTTTTATTAAATATGGC+TGG | + | tig0019900:11009-11028 | Msa1377310:intron | 15.0% |
!! | AAGTTTATAATAACTTTACA+TGG | + | tig0019900:11102-11121 | Msa1377310:intron | 15.0% |
!!! | TATGCTAGTTTATAATAATA+GGG | - | tig0019900:11663-11682 | None:intergenic | 15.0% |
!!! | ATATGCTAGTTTATAATAAT+AGG | - | tig0019900:11664-11683 | None:intergenic | 15.0% |
!! | AAGTTATTTATCATTGATAT+TGG | + | tig0019900:11817-11836 | Msa1377310:intron | 15.0% |
!!! | TATGTTTATTTTTGTGAAAA+TGG | + | tig0019900:11927-11946 | Msa1377310:intron | 15.0% |
!! | AAATTCCATAAAAAACAAAA+TGG | - | tig0019900:11958-11977 | None:intergenic | 15.0% |
!! | ATAACATATTAAAGATGAAA+CGG | - | tig0019900:12032-12051 | None:intergenic | 15.0% |
!!! | ATTTGATTTTTTAGATAGTA+CGG | + | tig0019900:12317-12336 | Msa1377310:intron | 15.0% |
!! | ATATTGAATTACAAATTGAA+AGG | + | tig0019900:13313-13332 | Msa1377310:CDS | 15.0% |
!! | TATTGAATTACAAATTGAAA+GGG | + | tig0019900:13314-13333 | Msa1377310:CDS | 15.0% |
!! | AAATAAAATCATAACACATT+TGG | - | tig0019900:13787-13806 | None:intergenic | 15.0% |
!!! | ATGTGTTATGATTTTATTTT+TGG | + | tig0019900:13788-13807 | Msa1377310:intron | 15.0% |
!!! | TGTGTTATGATTTTATTTTT+GGG | + | tig0019900:13789-13808 | Msa1377310:intron | 15.0% |
!! | TTATGATATCAAATAATAGT+GGG | - | tig0019900:14419-14438 | None:intergenic | 15.0% |
!! | TTTAATGGTAAATTAAATAG+GGG | + | tig0019900:14464-14483 | Msa1377310:intron | 15.0% |
!!! | TATAAAAGAGTCTTATAATT+AGG | + | tig0019900:14564-14583 | Msa1377310:intron | 15.0% |
!!! | ATAAAAGAGTCTTATAATTA+GGG | + | tig0019900:14565-14584 | Msa1377310:intron | 15.0% |
!!! | AGTTATTTCTTGATATATTT+AGG | + | tig0019900:15164-15183 | Msa1377310:intron | 15.0% |
!!! | TAATTTTTTTATTCAACAAC+AGG | - | tig0019900:15578-15597 | None:intergenic | 15.0% |
!! | TTAAAAAAGATTATATTGCT+AGG | + | tig0019900:16072-16091 | Msa1377310:intron | 15.0% |
!! | TAAAAAAGATTATATTGCTA+GGG | + | tig0019900:16073-16092 | Msa1377310:intron | 15.0% |
!!! | AATATGTACAAACTAATTTT+TGG | + | tig0019900:16136-16155 | Msa1377310:intron | 15.0% |
!!! | TTTTTTGGTTCATTAAATTA+TGG | + | tig0019900:16165-16184 | Msa1377310:intron | 15.0% |
!!! | AAAAATAATTGAGTTGTTAA+GGG | + | tig0019900:16210-16229 | Msa1377310:intron | 15.0% |
!!! | ATATTCTTACTCATTTATTT+TGG | + | tig0019900:16360-16379 | Msa1377310:intron | 15.0% |
!! | AACATAAAATAATGTTTCTT+AGG | + | tig0019900:16685-16704 | Msa1377310:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTCCCTA+TGG | + | tig0019900:17908-17927 | Msa1377310:intron | 15.0% |
!! | TTTATTTATTTATTATCCCA+AGG | - | tig0019900:18495-18514 | None:intergenic | 15.0% |
!! | GGGATAATAAATAAATAAAT+TGG | + | tig0019900:18496-18515 | Msa1377310:intron | 15.0% |
!! | ATTAATATTAGAAAGTAAGA+AGG | - | tig0019900:20044-20063 | None:intergenic | 15.0% |
!! | CTTACTTTCTAATATTAATT+AGG | + | tig0019900:20045-20064 | Msa1377310:intron | 15.0% |
!!! | TAACTGTTTTTTAAGTATTA+TGG | + | tig0019900:20077-20096 | Msa1377310:intron | 15.0% |
!!! | TGTATATAACCTTTTTAATT+AGG | + | tig0019900:20150-20169 | Msa1377310:intron | 15.0% |
!!! | TTGTTAATTTTTATATGGAT+TGG | - | tig0019900:20255-20274 | None:intergenic | 15.0% |
!!! | AAATTTTGCTAAAATAAAGT+GGG | - | tig0019900:20282-20301 | None:intergenic | 15.0% |
!! | CTAACTTTAATTAATAAAGA+AGG | + | tig0019900:20541-20560 | Msa1377310:intron | 15.0% |
!! | AATATTTGAAAATTAGTTCA+GGG | - | tig0019900:20789-20808 | None:intergenic | 15.0% |
!! | AAATATTTGAAAATTAGTTC+AGG | - | tig0019900:20790-20809 | None:intergenic | 15.0% |
!!! | AAGTTTGTTCAATAAATATT+TGG | - | tig0019900:20833-20852 | None:intergenic | 15.0% |
!!! | AGAGATGTAATAATTAATTT+TGG | - | tig0019900:22738-22757 | None:intergenic | 15.0% |
!! | TTAATAACAAATCTTGTTAA+TGG | - | tig0019900:22864-22883 | None:intergenic | 15.0% |
!!! | TTAACAAGATTTGTTATTAA+TGG | + | tig0019900:22864-22883 | Msa1377310:intron | 15.0% |
!!! | AAATTTTTATATTCTCGAAA+AGG | + | tig0019900:23415-23434 | Msa1377310:intron | 15.0% |
!!! | AATTTTTATATTCTCGAAAA+GGG | + | tig0019900:23416-23435 | Msa1377310:intron | 15.0% |
!! | ATATGATATAATTAACCAAT+GGG | - | tig0019900:25661-25680 | None:intergenic | 15.0% |
!! | TATATGATATAATTAACCAA+TGG | - | tig0019900:25662-25681 | None:intergenic | 15.0% |
!! | AATGTATAGTGAATTATGTT+TGG | + | tig0019900:9185-9204 | Msa1377310:intron | 20.0% |
!! | ATGTATAGTGAATTATGTTT+GGG | + | tig0019900:9186-9205 | Msa1377310:intron | 20.0% |
!!! | ATCAAATTGATATGTTTTCA+TGG | + | tig0019900:10478-10497 | Msa1377310:intron | 20.0% |
!! | ATCAAATATCAATGAGTATA+TGG | - | tig0019900:11187-11206 | None:intergenic | 20.0% |
!! | TTCAATAATACATAAAGTGT+CGG | - | tig0019900:11373-11392 | None:intergenic | 20.0% |
!! | GAAAAGTAATCAATGTATTT+AGG | - | tig0019900:11443-11462 | None:intergenic | 20.0% |
!!! | AAATACATTGATTACTTTTC+AGG | + | tig0019900:11443-11462 | Msa1377310:intron | 20.0% |
!! | GATTTCAACATATATGTTAA+TGG | + | tig0019900:11624-11643 | Msa1377310:intron | 20.0% |
!! | ACAAGATAAAATCAAAATCT+CGG | + | tig0019900:11719-11738 | Msa1377310:intron | 20.0% |
!! | TGAAAGAAAAAATAATTTCG+TGG | + | tig0019900:11849-11868 | Msa1377310:intron | 20.0% |
!!! | AGATTTATTTTGAGAGAAAA+TGG | + | tig0019900:11877-11896 | Msa1377310:intron | 20.0% |
!!! | AGAATTTTTTTTCTTCTTCT+TGG | + | tig0019900:12095-12114 | Msa1377310:intron | 20.0% |
!!! | CAAAAAAAATTTTTTGGAAG+GGG | - | tig0019900:12570-12589 | None:intergenic | 20.0% |
!!! | GCAAAAAAAATTTTTTGGAA+GGG | - | tig0019900:12571-12590 | None:intergenic | 20.0% |
!!! | TGCAAAAAAAATTTTTTGGA+AGG | - | tig0019900:12572-12591 | None:intergenic | 20.0% |
!!! | TATTTCTTTGAGTTTTTTGT+CGG | + | tig0019900:12620-12639 | Msa1377310:intron | 20.0% |
!!! | ACTAATTAAATTAGAAGTGT+TGG | + | tig0019900:12763-12782 | Msa1377310:intron | 20.0% |
!! | TAAATAAACCATTGAAGTAA+CGG | + | tig0019900:12786-12805 | Msa1377310:intron | 20.0% |
!! | ATTTATCACTTTCAATTAGT+AGG | + | tig0019900:12855-12874 | Msa1377310:intron | 20.0% |
!!! | CAATTATCAAAGTGATTTTT+AGG | - | tig0019900:13100-13119 | None:intergenic | 20.0% |
!! | ATTGAATTACAAATTGAAAG+GGG | + | tig0019900:13315-13334 | Msa1377310:CDS | 20.0% |
!!! | ACCAAACTCTATATTTTTTA+TGG | + | tig0019900:13498-13517 | Msa1377310:intron | 20.0% |
!!! | CCAAACTCTATATTTTTTAT+GGG | + | tig0019900:13499-13518 | Msa1377310:intron | 20.0% |
!!! | TCTATATTTTTTATGGGAAT+CGG | + | tig0019900:13505-13524 | Msa1377310:intron | 20.0% |
!!! | TTATGTAATTTTATGAGGTT+AGG | - | tig0019900:13567-13586 | None:intergenic | 20.0% |
!! | TAAATATTTCCCTATTTCAT+GGG | - | tig0019900:13910-13929 | None:intergenic | 20.0% |
!! | AATTGATAGAGTATAAAACT+AGG | + | tig0019900:13957-13976 | Msa1377310:intron | 20.0% |
!! | AGATGAACATTTAGAAAAAT+TGG | - | tig0019900:14065-14084 | None:intergenic | 20.0% |
!!! | CTAACTTGTAAGAAATAATT+GGG | - | tig0019900:14115-14134 | None:intergenic | 20.0% |
!!! | ACTAACTTGTAAGAAATAAT+TGG | - | tig0019900:14116-14135 | None:intergenic | 20.0% |
!!! | AATTATTTCTTACAAGTTAG+TGG | + | tig0019900:14115-14134 | Msa1377310:CDS | 20.0% |
!!! | ACAAGTTTTTTCATTTGAAT+AGG | - | tig0019900:14266-14285 | None:intergenic | 20.0% |
!! | TATGATATCAAATAATAGTG+GGG | - | tig0019900:14418-14437 | None:intergenic | 20.0% |
!! | CTTATGATATCAAATAATAG+TGG | - | tig0019900:14420-14439 | None:intergenic | 20.0% |
!!! | AAAACCTTACGTTTTTTTAA+TGG | + | tig0019900:14449-14468 | Msa1377310:intron | 20.0% |
!! | TTTACCATTAAAAAAACGTA+AGG | - | tig0019900:14456-14475 | None:intergenic | 20.0% |
!!! | TTGAAAAGAGTCTTATATTA+AGG | + | tig0019900:14528-14547 | Msa1377310:intron | 20.0% |
!!! | TGAAAAGAGTCTTATATTAA+GGG | + | tig0019900:14529-14548 | Msa1377310:intron | 20.0% |
!! | GTACTAATTTCATAAATTTC+AGG | - | tig0019900:14607-14626 | None:intergenic | 20.0% |
!! | CCAATATAATGAAAGAAAAA+GGG | - | tig0019900:14643-14662 | None:intergenic | 20.0% |
!! | ACCAATATAATGAAAGAAAA+AGG | - | tig0019900:14644-14663 | None:intergenic | 20.0% |
!! | AAACATAACTATAATGAGAA+AGG | - | tig0019900:14913-14932 | None:intergenic | 20.0% |
!! | ATGGAATGATCTAATAAATA+TGG | - | tig0019900:15031-15050 | None:intergenic | 20.0% |
!! | TTTAAATTATAACCAGTACT+GGG | + | tig0019900:15095-15114 | Msa1377310:intron | 20.0% |
!! | ATTTAAATACTTACTGTTGT+TGG | + | tig0019900:15196-15215 | Msa1377310:intron | 20.0% |
!! | CAAATTTCTTAATTATTGCA+TGG | - | tig0019900:15404-15423 | None:intergenic | 20.0% |
!! | TGTAAGATATGTTAAATCTT+TGG | + | tig0019900:15643-15662 | Msa1377310:intron | 20.0% |
!! | AATAAGAGGTTGAATATTAT+CGG | + | tig0019900:15692-15711 | Msa1377310:intron | 20.0% |
!! | AAACATTAACCTCTATTTAT+AGG | + | tig0019900:15746-15765 | Msa1377310:intron | 20.0% |
!! | AACATTAACCTCTATTTATA+GGG | + | tig0019900:15747-15766 | Msa1377310:intron | 20.0% |
!! | ATTCATAATCATGCATAAAT+AGG | + | tig0019900:15771-15790 | Msa1377310:intron | 20.0% |
!! | TTCATAATCATGCATAAATA+GGG | + | tig0019900:15772-15791 | Msa1377310:intron | 20.0% |
!!! | AATTTTTGGAAGTAGTTTTT+TGG | + | tig0019900:16150-16169 | Msa1377310:intron | 20.0% |
!!! | GAAAAATAATTGAGTTGTTA+AGG | + | tig0019900:16209-16228 | Msa1377310:intron | 20.0% |
!! | AAATTTAGTATGCATTGTAA+TGG | + | tig0019900:17168-17187 | Msa1377310:intron | 20.0% |
!! | TCATGAAACAAAATTAGAAA+TGG | - | tig0019900:17266-17285 | None:intergenic | 20.0% |
!! | TATTGAAATGAATAAACAAG+AGG | + | tig0019900:18174-18193 | Msa1377310:intron | 20.0% |
!! | AAATTTAGACTGTTTATAGA+TGG | + | tig0019900:18364-18383 | Msa1377310:intron | 20.0% |
!!! | TATTTTAAATGTGTATGATG+TGG | + | tig0019900:18805-18824 | Msa1377310:intron | 20.0% |
!!! | ATTTTAAATGTGTATGATGT+GGG | + | tig0019900:18806-18825 | Msa1377310:intron | 20.0% |
!!! | TTAGTGTTTTTTCTTATCTT+GGG | - | tig0019900:19332-19351 | None:intergenic | 20.0% |
!! | AAAAAACACTAACGTAAATT+GGG | + | tig0019900:19340-19359 | Msa1377310:intron | 20.0% |
!! | ACAAAATAGATATATGGAAA+AGG | - | tig0019900:19415-19434 | None:intergenic | 20.0% |
!!! | TCCATATATCTATTTTGTTT+TGG | + | tig0019900:19417-19436 | Msa1377310:intron | 20.0% |
!!! | CCATATATCTATTTTGTTTT+GGG | + | tig0019900:19418-19437 | Msa1377310:intron | 20.0% |
!! | AGTAGTTCTTACTAAAATTT+GGG | - | tig0019900:19572-19591 | None:intergenic | 20.0% |
!! | ATATTTACTCATACTTCAAA+AGG | + | tig0019900:19974-19993 | Msa1377310:intron | 20.0% |
!!! | ATTAAAGTGCCTAATTAAAA+AGG | - | tig0019900:20162-20181 | None:intergenic | 20.0% |
!!! | TTAATTTTTATATGGATTGG+TGG | - | tig0019900:20252-20271 | None:intergenic | 20.0% |
!!! | GATGCTTGTTAATTTTTATA+TGG | - | tig0019900:20260-20279 | None:intergenic | 20.0% |
!!! | GAAATTTTGCTAAAATAAAG+TGG | - | tig0019900:20283-20302 | None:intergenic | 20.0% |
!! | GTGTACATAAGATTAAAATT+AGG | - | tig0019900:20717-20736 | None:intergenic | 20.0% |
!! | TAGAAGCTTACTTAAAATAT+AGG | - | tig0019900:20900-20919 | None:intergenic | 20.0% |
!! | TTCAAAGTAAATATTACACA+TGG | - | tig0019900:21285-21304 | None:intergenic | 20.0% |
!!! | AGGATGCATATTAATATTTT+TGG | - | tig0019900:21433-21452 | None:intergenic | 20.0% |
!! | TTTCATATAGTAAACCAAAA+GGG | - | tig0019900:21560-21579 | None:intergenic | 20.0% |
!!! | TTTTCATATAGTAAACCAAA+AGG | - | tig0019900:21561-21580 | None:intergenic | 20.0% |
!!! | AATTGTTGCTTATTTTCTTT+TGG | - | tig0019900:22351-22370 | None:intergenic | 20.0% |
!! | AAAAGAAAATAAGCAACAAT+TGG | + | tig0019900:22350-22369 | Msa1377310:intron | 20.0% |
!! | AAAGAAAATAAGCAACAATT+GGG | + | tig0019900:22351-22370 | Msa1377310:intron | 20.0% |
!! | TGAATTTATTGATAAATCCT+TGG | + | tig0019900:22513-22532 | Msa1377310:intron | 20.0% |
!!! | AGATTTGTTATTAATGGTTT+TGG | + | tig0019900:22870-22889 | Msa1377310:intron | 20.0% |
!!! | GATTTGTTATTAATGGTTTT+GGG | + | tig0019900:22871-22890 | Msa1377310:intron | 20.0% |
!!! | AACTTTTGTCTTATTTTTTG+AGG | + | tig0019900:23178-23197 | Msa1377310:intron | 20.0% |
!!! | ACTTTTGTCTTATTTTTTGA+GGG | + | tig0019900:23179-23198 | Msa1377310:intron | 20.0% |
!!! | TTTTCAATAATTCTCTCATT+TGG | + | tig0019900:23608-23627 | Msa1377310:intron | 20.0% |
!!! | TTTGTTTCAGTCTTAAATTT+TGG | + | tig0019900:24436-24455 | Msa1377310:intron | 20.0% |
!!! | GTTATAATTTTTTGAAGTGA+GGG | - | tig0019900:24480-24499 | None:intergenic | 20.0% |
!!! | AGTTATAATTTTTTGAAGTG+AGG | - | tig0019900:24481-24500 | None:intergenic | 20.0% |
!! | TTAACAAAAGAATCTATATC+TGG | - | tig0019900:24748-24767 | None:intergenic | 20.0% |
!! | TTATTAGCATAAGTCATTTA+TGG | + | tig0019900:24993-25012 | Msa1377310:intron | 20.0% |
!! | TATAATTATTTCACGAATGT+TGG | + | tig0019900:25173-25192 | Msa1377310:intron | 20.0% |
!!! | TGAAATTTCAAAGTATCAAA+GGG | - | tig0019900:25806-25825 | None:intergenic | 20.0% |
!!! | ATGAAATTTCAAAGTATCAA+AGG | - | tig0019900:25807-25826 | None:intergenic | 20.0% |
!!! | AGTTTTGCTTTTCTTCAATT+CGG | + | tig0019900:8419-8438 | Msa1377310:intron | 25.0% |
! | GTCATTTACAACTTAAATAC+AGG | - | tig0019900:8665-8684 | None:intergenic | 25.0% |
!! | ATTGATTCTAACTTGTATGT+TGG | + | tig0019900:8810-8829 | Msa1377310:intron | 25.0% |
! | TCAATAAAGTTATGCAAAAG+TGG | + | tig0019900:8908-8927 | Msa1377310:intron | 25.0% |
! | CAATAAAGTTATGCAAAAGT+GGG | + | tig0019900:8909-8928 | Msa1377310:intron | 25.0% |
!! | TCAAATAGAGTCAATTTTAG+AGG | + | tig0019900:8992-9011 | Msa1377310:intron | 25.0% |
!!! | TACACTTCTAGAATCAATTT+TGG | + | tig0019900:9062-9081 | Msa1377310:intron | 25.0% |
!! | ATGTTTGGTTTCATTTCTAA+AGG | - | tig0019900:9090-9109 | None:intergenic | 25.0% |
! | ACAAATCACTTCTATTAACA+AGG | - | tig0019900:9214-9233 | None:intergenic | 25.0% |
! | TTTGTATGAAAGATGTTGTT+TGG | + | tig0019900:9229-9248 | Msa1377310:intron | 25.0% |
!!! | TTTGTGTCAAAATTGCTTTT+GGG | + | tig0019900:9256-9275 | Msa1377310:intron | 25.0% |
!! | GATACTTTTATGAAGTTGTT+TGG | - | tig0019900:9514-9533 | None:intergenic | 25.0% |
!!! | AGTAGCTTTTTAGTCTAAAT+GGG | + | tig0019900:9606-9625 | Msa1377310:intron | 25.0% |
! | GCAAAAAATATAGTATGATC+AGG | - | tig0019900:9796-9815 | None:intergenic | 25.0% |
!!! | TACATGATTTTGGGTTTTTT+CGG | + | tig0019900:9960-9979 | Msa1377310:CDS | 25.0% |
! | TTTAGAAATTGTATAGCACT+AGG | - | tig0019900:9992-10011 | None:intergenic | 25.0% |
!!! | GTTTCATTTTCATTGATTTC+TGG | + | tig0019900:10140-10159 | Msa1377310:intron | 25.0% |
!!! | CTAAACTATTTTTTGATGCA+GGG | + | tig0019900:10768-10787 | Msa1377310:intron | 25.0% |
!!! | AAACTCATAGTTTGAGTTTT+TGG | - | tig0019900:10868-10887 | None:intergenic | 25.0% |
! | ATATGGTTACAATCAAGTAA+TGG | - | tig0019900:11170-11189 | None:intergenic | 25.0% |
!! | CTCATTGATATTTGATTTAC+AGG | + | tig0019900:11191-11210 | Msa1377310:intron | 25.0% |
!!! | ATTCTTTTTACCTTTGGAAA+GGG | + | tig0019900:11317-11336 | Msa1377310:intron | 25.0% |
! | GACACTTTATGTATTATTGA+AGG | + | tig0019900:11372-11391 | Msa1377310:intron | 25.0% |
! | TTGGGAGTAACTTATTTAAT+TGG | + | tig0019900:11405-11424 | Msa1377310:intron | 25.0% |
!! | GTGAAACTTATGTTGATAAA+TGG | + | tig0019900:11498-11517 | Msa1377310:CDS | 25.0% |
! | CATATATGTTAATGGCATAT+AGG | + | tig0019900:11632-11651 | Msa1377310:intron | 25.0% |
!!! | TTTATTTTGAGAGAAAATGG+TGG | + | tig0019900:11880-11899 | Msa1377310:intron | 25.0% |
!!! | AACTGCCATTTTGTTTTTTA+TGG | + | tig0019900:11950-11969 | Msa1377310:intron | 25.0% |
! | TATGGAATTTCAAATACTTC+TGG | + | tig0019900:11968-11987 | Msa1377310:intron | 25.0% |
! | ATGGAATTTCAAATACTTCT+GGG | + | tig0019900:11969-11988 | Msa1377310:intron | 25.0% |
!!! | TGAAACGGATTAATAGAAAA+CGG | - | tig0019900:12017-12036 | None:intergenic | 25.0% |
! | TAAAGCTGAAGAAATTGAAA+TGG | - | tig0019900:12437-12456 | None:intergenic | 25.0% |
!!! | CTTTACTCTTTGATTTGTTT+AGG | + | tig0019900:12452-12471 | Msa1377310:intron | 25.0% |
! | AACTCAAAGAAATAATGCAA+AGG | - | tig0019900:12614-12633 | None:intergenic | 25.0% |
!! | CTTTGTTTGACAAATTTACT+TGG | + | tig0019900:12682-12701 | Msa1377310:intron | 25.0% |
!!! | AAAGTGATTTTTAGGAATTC+TGG | - | tig0019900:13092-13111 | None:intergenic | 25.0% |
!! | ATCAAAGAGTTTAACTCTTT+TGG | + | tig0019900:13344-13363 | Msa1377310:CDS | 25.0% |
!!! | TTTTGGTGAGAGTTTTATTA+TGG | + | tig0019900:13361-13380 | Msa1377310:intron | 25.0% |
! | CAAACAAAACTAATGTCAAA+CGG | - | tig0019900:13474-13493 | None:intergenic | 25.0% |
! | CCCATAAAAAATATAGAGTT+TGG | - | tig0019900:13502-13521 | None:intergenic | 25.0% |
! | ATTTGGTTACAACAGATTAA+AGG | - | tig0019900:13770-13789 | None:intergenic | 25.0% |
! | GTAAATATTTCCCTATTTCA+TGG | - | tig0019900:13911-13930 | None:intergenic | 25.0% |
!! | TTTTTCTAAATGTTCATCTC+AGG | + | tig0019900:14066-14085 | Msa1377310:intron | 25.0% |
! | AATCAAATCATTAATCCATG+TGG | + | tig0019900:14501-14520 | Msa1377310:intron | 25.0% |
!! | CCCTTTTTCTTTCATTATAT+TGG | + | tig0019900:14640-14659 | Msa1377310:intron | 25.0% |
! | ACTATTTCATATGTATGAGA+TGG | - | tig0019900:14724-14743 | None:intergenic | 25.0% |
! | ATAACTATAATGAGAAAGGT+AGG | - | tig0019900:14909-14928 | None:intergenic | 25.0% |
!! | ATATCCAATTTTGTGTCAAA+TGG | - | tig0019900:15050-15069 | None:intergenic | 25.0% |
! | CTTTAAATTATAACCAGTAC+TGG | + | tig0019900:15094-15113 | Msa1377310:intron | 25.0% |
! | TATCAAGAAATAACTCTTAC+CGG | - | tig0019900:15159-15178 | None:intergenic | 25.0% |
! | GCAATAATTAAGAAATTTGC+TGG | + | tig0019900:15405-15424 | Msa1377310:CDS | 25.0% |
!!! | AGTTATTTCTAAGCTATCAA+GGG | + | tig0019900:15461-15480 | Msa1377310:CDS | 25.0% |
! | ATAAAAAAATTACGTCCAAG+TGG | + | tig0019900:15586-15605 | Msa1377310:intron | 25.0% |
! | AGTAAAAGAGAGATAATAAG+AGG | + | tig0019900:15678-15697 | Msa1377310:intron | 25.0% |
! | ACATTAACCTCTATTTATAG+GGG | + | tig0019900:15748-15767 | Msa1377310:intron | 25.0% |
! | ATGATAATAACCATGTCATA+TGG | + | tig0019900:15812-15831 | Msa1377310:intron | 25.0% |
!!! | TATTTTGGTCTGTAAGATAT+CGG | + | tig0019900:16375-16394 | Msa1377310:intron | 25.0% |
! | ACATGTAAGATATCTAAACT+TGG | - | tig0019900:16640-16659 | None:intergenic | 25.0% |
!!! | TCTTTCAAATTTTTTGAGAG+TGG | + | tig0019900:16782-16801 | Msa1377310:intron | 25.0% |
! | GAACTAAAAAATTGTATTGG+AGG | - | tig0019900:16932-16951 | None:intergenic | 25.0% |
!!! | TTTGATCTAACATGTTTTTG+TGG | + | tig0019900:17132-17151 | Msa1377310:intron | 25.0% |
! | TATACCCAGATGATAAATAA+GGG | - | tig0019900:17418-17437 | None:intergenic | 25.0% |
! | TTATACCCAGATGATAAATA+AGG | - | tig0019900:17419-17438 | None:intergenic | 25.0% |
!!! | GTTCATTCACAACATTTTTT+TGG | + | tig0019900:17987-18006 | Msa1377310:CDS | 25.0% |
! | AATATATCACACTCAAGATT+TGG | + | tig0019900:18022-18041 | Msa1377310:CDS | 25.0% |
! | ATATATCACACTCAAGATTT+GGG | + | tig0019900:18023-18042 | Msa1377310:CDS | 25.0% |
! | TATCTAAATGTGTATAACGT+TGG | - | tig0019900:19119-19138 | None:intergenic | 25.0% |
!! | ATGTGTTTGAATACAGATTT+TGG | + | tig0019900:19173-19192 | Msa1377310:intron | 25.0% |
!!! | GTTAGTGTTTTTTCTTATCT+TGG | - | tig0019900:19333-19352 | None:intergenic | 25.0% |
! | GAAAAAACACTAACGTAAAT+TGG | + | tig0019900:19339-19358 | Msa1377310:intron | 25.0% |
! | CCCAAAACAAAATAGATATA+TGG | - | tig0019900:19421-19440 | None:intergenic | 25.0% |
!! | TTTTTACGGTATAGTCAAAA+AGG | - | tig0019900:19473-19492 | None:intergenic | 25.0% |
!!! | CAGTAAGGTTGAATTTTTTA+CGG | - | tig0019900:19487-19506 | None:intergenic | 25.0% |
! | AAATAAATCAACACCAGATT+TGG | + | tig0019900:19524-19543 | Msa1377310:intron | 25.0% |
! | AATAAATCAACACCAGATTT+GGG | + | tig0019900:19525-19544 | Msa1377310:intron | 25.0% |
! | TAGTTCTTACTAAAATTTGG+GGG | - | tig0019900:19570-19589 | None:intergenic | 25.0% |
! | GTAGTTCTTACTAAAATTTG+GGG | - | tig0019900:19571-19590 | None:intergenic | 25.0% |
! | GAGTAGTTCTTACTAAAATT+TGG | - | tig0019900:19573-19592 | None:intergenic | 25.0% |
!! | ATTGTTTAAAGTTTCTCTAC+GGG | - | tig0019900:19823-19842 | None:intergenic | 25.0% |
!! | CATTGTTTAAAGTTTCTCTA+CGG | - | tig0019900:19824-19843 | None:intergenic | 25.0% |
!! | ACCTATTCTATGATAGTTTT+TGG | + | tig0019900:19845-19864 | Msa1377310:intron | 25.0% |
! | ACCAAAAACTATCATAGAAT+AGG | - | tig0019900:19849-19868 | None:intergenic | 25.0% |
! | AACAAGATTAAATTCAAGTG+TGG | + | tig0019900:20190-20209 | Msa1377310:intron | 25.0% |
!!! | GGAATATTGTAATCTTGTTT+TGG | + | tig0019900:20382-20401 | Msa1377310:intron | 25.0% |
!!! | ATATTGTAATCTTGTTTTGG+TGG | + | tig0019900:20385-20404 | Msa1377310:intron | 25.0% |
!! | TTATTTTCATACCACATTGT+AGG | + | tig0019900:20443-20462 | Msa1377310:intron | 25.0% |
! | AAGTATCAAATGATCATTCA+TGG | + | tig0019900:20676-20695 | Msa1377310:intron | 25.0% |
! | CAAAATATTGAAGACTGAAA+AGG | + | tig0019900:20853-20872 | Msa1377310:intron | 25.0% |
! | ACTTCTAATATTCTCAGAAA+TGG | - | tig0019900:21141-21160 | None:intergenic | 25.0% |
! | TTATCCAACATTACTTTCAA+AGG | + | tig0019900:21167-21186 | Msa1377310:CDS | 25.0% |
! | AAGTAAATATTACACATGGA+AGG | - | tig0019900:21281-21300 | None:intergenic | 25.0% |
!! | ACTTTGAAAGAATCTATGTT+CGG | + | tig0019900:21297-21316 | Msa1377310:intron | 25.0% |
!!! | AATATTTTTGGTTGTTCCAA+AGG | - | tig0019900:21421-21440 | None:intergenic | 25.0% |
!! | AGAAAACTTTTCTTCTACAT+TGG | - | tig0019900:21514-21533 | None:intergenic | 25.0% |
!! | ACGTGATTTTGTTAACAAAA+CGG | - | tig0019900:21653-21672 | None:intergenic | 25.0% |
! | CAACAAAATTAACCTCTTAA+CGG | - | tig0019900:21787-21806 | None:intergenic | 25.0% |
!! | CTTGTTATATTAGTGAGTTA+TGG | + | tig0019900:21882-21901 | Msa1377310:intron | 25.0% |
! | TCTGTTCTTTAGTTATTCTT+AGG | + | tig0019900:22792-22811 | Msa1377310:intron | 25.0% |
!! | TATCAGATTTATCTAAAGCT+TGG | - | tig0019900:23066-23085 | None:intergenic | 25.0% |
! | TTGCAAGTAAATTTGTATGA+GGG | + | tig0019900:23482-23501 | Msa1377310:intron | 25.0% |
! | ATATTAAAATGCACAGATAC+TGG | + | tig0019900:24134-24153 | Msa1377310:intron | 25.0% |
!!! | AGCAGCTATTTTACTAAAAA+GGG | - | tig0019900:24364-24383 | None:intergenic | 25.0% |
!!! | AAGCAGCTATTTTACTAAAA+AGG | - | tig0019900:24365-24384 | None:intergenic | 25.0% |
!! | TTTTAGTAAAATAGCTGCTT+AGG | + | tig0019900:24365-24384 | Msa1377310:intron | 25.0% |
!! | AAATTTTGTGAGCTTATACT+TGG | - | tig0019900:24628-24647 | None:intergenic | 25.0% |
!! | TTCTTTTGTTAATGTGACAA+AGG | + | tig0019900:24756-24775 | Msa1377310:CDS | 25.0% |
!! | ATGGAATTTGTTTATAAACC+TGG | + | tig0019900:25012-25031 | Msa1377310:intron | 25.0% |
! | TGAAGCAAGATTTACATTAT+TGG | + | tig0019900:25269-25288 | Msa1377310:CDS | 25.0% |
! | ATATTCACAAGCCAAATAAA+AGG | - | tig0019900:25773-25792 | None:intergenic | 25.0% |
TCATAATTGAAACACACGAA+TGG | + | tig0019900:7887-7906 | Msa1377310:five_prime_UTR | 30.0% | |
!!! | AAGCGCTTTTTAACTTTAAC+GGG | - | tig0019900:7980-7999 | None:intergenic | 30.0% |
!!! | GAAGCGCTTTTTAACTTTAA+CGG | - | tig0019900:7981-8000 | None:intergenic | 30.0% |
TAAACCCTAATCTCATTCAA+TGG | + | tig0019900:8094-8113 | Msa1377310:exon | 30.0% | |
TCTTCCATTGAATGAGATTA+GGG | - | tig0019900:8101-8120 | None:intergenic | 30.0% | |
ATCTTCCATTGAATGAGATT+AGG | - | tig0019900:8102-8121 | None:intergenic | 30.0% | |
AAGAAAAGCAAAACTATGCA+CGG | - | tig0019900:8414-8433 | None:intergenic | 30.0% | |
! | TCTAACTTTTCTTTACGCTT+TGG | + | tig0019900:8458-8477 | Msa1377310:intron | 30.0% |
!! | TATGTTTTTGAATCGTGAAG+AGG | + | tig0019900:8515-8534 | Msa1377310:CDS | 30.0% |
CTTACTGGATCTCTATATAT+CGG | - | tig0019900:8552-8571 | None:intergenic | 30.0% | |
AAACAAAGTTGACTACTTAC+TGG | - | tig0019900:8567-8586 | None:intergenic | 30.0% | |
CAATCAAGAATATTGCACTA+AGG | - | tig0019900:8608-8627 | None:intergenic | 30.0% | |
!! | GATTTTGAGTGAATTGATTC+TGG | + | tig0019900:8852-8871 | Msa1377310:intron | 30.0% |
!!! | GGAGTTTTTGATTCTAGAAT+TGG | - | tig0019900:8961-8980 | None:intergenic | 30.0% |
! | CTCTATTTGAAGCTAGAAAT+TGG | - | tig0019900:8982-9001 | None:intergenic | 30.0% |
! | CTTTGTGTCAAAATTGCTTT+TGG | + | tig0019900:9255-9274 | Msa1377310:intron | 30.0% |
! | CACATTCCATCTTTTAGTAA+TGG | - | tig0019900:9304-9323 | None:intergenic | 30.0% |
!! | TAGTTTATAAGGGCACTTAA+AGG | + | tig0019900:9367-9386 | Msa1377310:intron | 30.0% |
! | TTCTATGAGAAGCATGAATT+TGG | - | tig0019900:9463-9482 | None:intergenic | 30.0% |
TGTTTGGATACACATTTAGA+TGG | - | tig0019900:9582-9601 | None:intergenic | 30.0% | |
TAAAAAGCTACTCGTATGTT+TGG | - | tig0019900:9598-9617 | None:intergenic | 30.0% | |
!! | GAGTAGCTTTTTAGTCTAAA+TGG | + | tig0019900:9605-9624 | Msa1377310:intron | 30.0% |
CAATGCAAAGTGATTATGTT+TGG | - | tig0019900:9671-9690 | None:intergenic | 30.0% | |
GGTACAGAAATTGATTATCA+CGG | - | tig0019900:9743-9762 | None:intergenic | 30.0% | |
! | ATTGTTCCTCTTTTTCTTTG+TGG | + | tig0019900:9915-9934 | Msa1377310:intron | 30.0% |
AATTAGCCACAAAGAAAAAG+AGG | - | tig0019900:9924-9943 | None:intergenic | 30.0% | |
!! | TTTCTTGGTCTTATTCTTGT+TGG | + | tig0019900:10237-10256 | Msa1377310:intron | 30.0% |
TCTTATTCTTGTTGGAACAT+TGG | + | tig0019900:10245-10264 | Msa1377310:intron | 30.0% | |
TTTCCCTTTATTGATGTAGA+TGG | + | tig0019900:10525-10544 | Msa1377310:intron | 30.0% | |
TATCAGGATGAAAGAAAACA+GGG | - | tig0019900:10571-10590 | None:intergenic | 30.0% | |
TTATCAGGATGAAAGAAAAC+AGG | - | tig0019900:10572-10591 | None:intergenic | 30.0% | |
!!! | TTATTTTGGATTTTACTGCC+AGG | + | tig0019900:10609-10628 | Msa1377310:intron | 30.0% |
ACAACATACTTCTTATAGTG+AGG | - | tig0019900:10679-10698 | None:intergenic | 30.0% | |
!!! | GCTAAACTATTTTTTGATGC+AGG | + | tig0019900:10767-10786 | Msa1377310:intron | 30.0% |
ACATTCTATATGCAAGTAAG+TGG | + | tig0019900:10811-10830 | Msa1377310:intron | 30.0% | |
CATTCTATATGCAAGTAAGT+GGG | + | tig0019900:10812-10831 | Msa1377310:intron | 30.0% | |
! | CATTGTGTAATACTTTTCCT+AGG | + | tig0019900:10923-10942 | Msa1377310:intron | 30.0% |
AAACACTTCAAATACAACCT+AGG | - | tig0019900:10943-10962 | None:intergenic | 30.0% | |
TAACTAAAGAGCCTTCAATT+TGG | - | tig0019900:10991-11010 | None:intergenic | 30.0% | |
GCGTCATTACTAAAATTGTT+AGG | + | tig0019900:11045-11064 | Msa1377310:intron | 30.0% | |
TTCCAAAGGTAAAAAGAATG+CGG | - | tig0019900:11316-11335 | None:intergenic | 30.0% | |
!! | CATTCTTTTTACCTTTGGAA+AGG | + | tig0019900:11316-11335 | Msa1377310:intron | 30.0% |
GGCATTAAGTTTCTTCAAAA+GGG | + | tig0019900:11473-11492 | Msa1377310:CDS | 30.0% | |
GCATTAAGTTTCTTCAAAAG+GGG | + | tig0019900:11474-11493 | Msa1377310:CDS | 30.0% | |
ACCTTGAAATTCTTCTTCTT+AGG | + | tig0019900:11559-11578 | Msa1377310:intron | 30.0% | |
ACCTAAGAAGAAGAATTTCA+AGG | - | tig0019900:11563-11582 | None:intergenic | 30.0% | |
CTTCTTCTTGGTTATGTAAT+CGG | + | tig0019900:12107-12126 | Msa1377310:intron | 30.0% | |
TTGGTTATGTAATCGGATAT+CGG | + | tig0019900:12114-12133 | Msa1377310:intron | 30.0% | |
! | AGCCTATAAACATTTAGAAC+CGG | + | tig0019900:12488-12507 | Msa1377310:CDS | 30.0% |
TACATTTACCGTTACTTCAA+TGG | - | tig0019900:12797-12816 | None:intergenic | 30.0% | |
CTTGTCATTGTACCTATATT+AGG | - | tig0019900:12947-12966 | None:intergenic | 30.0% | |
CTAATATAGGTACAATGACA+AGG | + | tig0019900:12945-12964 | Msa1377310:intron | 30.0% | |
! | TAGTTGCTTTATTCAACAGA+TGG | - | tig0019900:13052-13071 | None:intergenic | 30.0% |
!!! | TACAAAAAAGGGTGTTTTCA+CGG | + | tig0019900:13190-13209 | Msa1377310:intron | 30.0% |
TAAACTGCACTAATGTCAAA+CGG | - | tig0019900:13410-13429 | None:intergenic | 30.0% | |
! | ACTCTTTTCAAAATTCCACA+TGG | - | tig0019900:14519-14538 | None:intergenic | 30.0% |
GGAAACAGTAATTTAACAGA+AGG | - | tig0019900:14684-14703 | None:intergenic | 30.0% | |
AAATTACTGTTTCCCATAAG+TGG | + | tig0019900:14690-14709 | Msa1377310:intron | 30.0% | |
ATGGAAAATTGACCACTTAT+GGG | - | tig0019900:14705-14724 | None:intergenic | 30.0% | |
TATGTTTACCACTTTAATGC+AGG | + | tig0019900:14926-14945 | Msa1377310:intron | 30.0% | |
GGAAGAATCAATGTTTATCT+AGG | - | tig0019900:15010-15029 | None:intergenic | 30.0% | |
CATTCCATTTGACACAAAAT+TGG | + | tig0019900:15043-15062 | Msa1377310:intron | 30.0% | |
! | AAAGAGCATATATCTGCAAA+AGG | - | tig0019900:15364-15383 | None:intergenic | 30.0% |
!! | AGATATATGCTCTTTAAAGC+AGG | + | tig0019900:15369-15388 | Msa1377310:intron | 30.0% |
TAACTGATATTAGTTCCTCA+AGG | - | tig0019900:15446-15465 | None:intergenic | 30.0% | |
!! | CAGTTATTTCTAAGCTATCA+AGG | + | tig0019900:15460-15479 | Msa1377310:CDS | 30.0% |
!! | GTTATTTCTAAGCTATCAAG+GGG | + | tig0019900:15462-15481 | Msa1377310:CDS | 30.0% |
ACATAGCTTATATACTCCAA+TGG | - | tig0019900:15498-15517 | None:intergenic | 30.0% | |
ATTGGAGTATATAAGCTATG+TGG | + | tig0019900:15497-15516 | Msa1377310:CDS | 30.0% | |
TTGTAAGAAAATGAACCACT+TGG | - | tig0019900:15604-15623 | None:intergenic | 30.0% | |
! | ATTTTCTTACAAACCCTCAT+TGG | + | tig0019900:15612-15631 | Msa1377310:intron | 30.0% |
TATGAATCCCCTATAAATAG+AGG | - | tig0019900:15758-15777 | None:intergenic | 30.0% | |
GTATTAGTATCCATATGACA+TGG | - | tig0019900:15825-15844 | None:intergenic | 30.0% | |
TATTATAGCAAGCGTAAAGA+CGG | + | tig0019900:15908-15927 | Msa1377310:intron | 30.0% | |
TGGTTCATTAAATTATGGTG+TGG | + | tig0019900:16170-16189 | Msa1377310:intron | 30.0% | |
GGTTCATTAAATTATGGTGT+GGG | + | tig0019900:16171-16190 | Msa1377310:intron | 30.0% | |
ATCTGTAGATATTCCTTCTA+AGG | + | tig0019900:16469-16488 | Msa1377310:intron | 30.0% | |
TCTGTAGATATTCCTTCTAA+GGG | + | tig0019900:16470-16489 | Msa1377310:intron | 30.0% | |
CTAGGAAGATCTATAATTCT+AGG | - | tig0019900:16524-16543 | None:intergenic | 30.0% | |
CTAGAATTATAGATCTTCCT+AGG | + | tig0019900:16522-16541 | Msa1377310:intron | 30.0% | |
CCACACTATTGCATTTATAA+TGG | - | tig0019900:16579-16598 | None:intergenic | 30.0% | |
CCATTATAAATGCAATAGTG+TGG | + | tig0019900:16576-16595 | Msa1377310:intron | 30.0% | |
TCTTACATGTTCAAACTCTA+CGG | + | tig0019900:16650-16669 | Msa1377310:intron | 30.0% | |
CTAAAAAATTGTATTGGAGG+AGG | - | tig0019900:16929-16948 | None:intergenic | 30.0% | |
GGGGAACTAAAAAATTGTAT+TGG | - | tig0019900:16935-16954 | None:intergenic | 30.0% | |
!!! | TTTTTTAGTTCCCCCAAATT+AGG | + | tig0019900:16941-16960 | Msa1377310:intron | 30.0% |
!!! | TTTTTAGTTCCCCCAAATTA+GGG | + | tig0019900:16942-16961 | Msa1377310:intron | 30.0% |
ATACAAAATCCCCCTAATTT+GGG | - | tig0019900:16956-16975 | None:intergenic | 30.0% | |
AATACAAAATCCCCCTAATT+TGG | - | tig0019900:16957-16976 | None:intergenic | 30.0% | |
ATAAAAAAGGAAGGAAGAAG+TGG | - | tig0019900:17033-17052 | None:intergenic | 30.0% | |
! | TAAGGCTCTATTTGGATTTT+GGG | - | tig0019900:17094-17113 | None:intergenic | 30.0% |
! | TTAAGGCTCTATTTGGATTT+TGG | - | tig0019900:17095-17114 | None:intergenic | 30.0% |
ACAAACATTAAGGCTCTATT+TGG | - | tig0019900:17102-17121 | None:intergenic | 30.0% | |
TCGATGTTGAACAAACATTA+AGG | - | tig0019900:17112-17131 | None:intergenic | 30.0% | |
TATGCATTGTAATGGTAGAT+TGG | + | tig0019900:17176-17195 | Msa1377310:intron | 30.0% | |
! | ATTCCCCTTATTTATCATCT+GGG | + | tig0019900:17411-17430 | Msa1377310:CDS | 30.0% |
ATACCCAGATGATAAATAAG+GGG | - | tig0019900:17417-17436 | None:intergenic | 30.0% | |
! | CACAATTCTTATCATTGACT+TGG | + | tig0019900:17830-17849 | Msa1377310:intron | 30.0% |
AAAAAAAAAGAGTTGCCAAG+AGG | - | tig0019900:17895-17914 | None:intergenic | 30.0% | |
!!! | TCACAACATTTTTTTGGAAC+TGG | + | tig0019900:17993-18012 | Msa1377310:CDS | 30.0% |
CAGTCTAAATTTAAGAAACG+AGG | - | tig0019900:18356-18375 | None:intergenic | 30.0% | |
TTTCATCATCAAAAGTGGAT+CGG | - | tig0019900:18396-18415 | None:intergenic | 30.0% | |
ACATGTTTCATCATCAAAAG+TGG | - | tig0019900:18401-18420 | None:intergenic | 30.0% | |
TGAATTGAGAAAAGCTAAAC+TGG | + | tig0019900:18464-18483 | Msa1377310:intron | 30.0% | |
!! | AAATCAGACTTTGAAGTATC+AGG | - | tig0019900:18543-18562 | None:intergenic | 30.0% |
! | TTTTATCATGCTATCTTCAC+TGG | - | tig0019900:18602-18621 | None:intergenic | 30.0% |
TGAAGATAGCATGATAAAAG+TGG | + | tig0019900:18603-18622 | Msa1377310:intron | 30.0% | |
TCATTAACTCTAACAAGAGA+TGG | + | tig0019900:18727-18746 | Msa1377310:intron | 30.0% | |
!! | TACATATTTTTGTTCAGAGC+CGG | + | tig0019900:18900-18919 | Msa1377310:intron | 30.0% |
AAGCTCAATAACTTCCATAT+TGG | - | tig0019900:19061-19080 | None:intergenic | 30.0% | |
!! | AGATTTTGGTAGTTCGTTTT+CGG | + | tig0019900:19187-19206 | Msa1377310:intron | 30.0% |
GAATGAAAAAAGAGACAGTA+AGG | - | tig0019900:19502-19521 | None:intergenic | 30.0% | |
TTACTAAAATTTGGGGGATA+GGG | - | tig0019900:19564-19583 | None:intergenic | 30.0% | |
TTTAGTAAGAACTACTCTTG+AGG | + | tig0019900:19576-19595 | Msa1377310:intron | 30.0% | |
!!! | GCATTACCCTATTTTAATCA+AGG | + | tig0019900:19644-19663 | Msa1377310:intron | 30.0% |
TCCTGACCTTGATTAAAATA+GGG | - | tig0019900:19653-19672 | None:intergenic | 30.0% | |
!! | CATTAGGTTGGACTATATAA+TGG | - | tig0019900:19755-19774 | None:intergenic | 30.0% |
!! | TACGGGGATTTTAATCATTA+TGG | - | tig0019900:19806-19825 | None:intergenic | 30.0% |
! | TTGTTTAAAGTTTCTCTACG+GGG | - | tig0019900:19822-19841 | None:intergenic | 30.0% |
!!! | AGATACAACTGTTTTGAGTT+AGG | - | tig0019900:19897-19916 | None:intergenic | 30.0% |
AAGAGAAGAAAGATGAAAAC+TGG | + | tig0019900:19932-19951 | Msa1377310:intron | 30.0% | |
AGAGAAGAAAGATGAAAACT+GGG | + | tig0019900:19933-19952 | Msa1377310:intron | 30.0% | |
TTAAATTCAAGTGTGGTTGT+TGG | + | tig0019900:20197-20216 | Msa1377310:intron | 30.0% | |
! | TTGGACTATTTAAAGTGCTA+AGG | + | tig0019900:20216-20235 | Msa1377310:intron | 30.0% |
! | TATTTAAAGTGCTAAGGACT+AGG | + | tig0019900:20222-20241 | Msa1377310:intron | 30.0% |
! | ATTTAAAGTGCTAAGGACTA+GGG | + | tig0019900:20223-20242 | Msa1377310:intron | 30.0% |
CAAAAACGGTAAAGAATAGA+GGG | + | tig0019900:20343-20362 | Msa1377310:intron | 30.0% | |
AGAATAGAGGGAAAAAATAG+AGG | + | tig0019900:20355-20374 | Msa1377310:intron | 30.0% | |
TTTCAATTATGCCTACAATG+TGG | - | tig0019900:20457-20476 | None:intergenic | 30.0% | |
TGTAGGCATAATTGAAAGTT+TGG | + | tig0019900:20460-20479 | Msa1377310:intron | 30.0% | |
AAGTTAGAGATTCAGTCAAT+CGG | - | tig0019900:20528-20547 | None:intergenic | 30.0% | |
ATGATCATTTGATACTTGCT+TGG | - | tig0019900:20673-20692 | None:intergenic | 30.0% | |
! | TTCTCATAAATGGTGTCAAA+AGG | + | tig0019900:21109-21128 | Msa1377310:CDS | 30.0% |
AATATTCTCAGAAATGGCAT+AGG | - | tig0019900:21135-21154 | None:intergenic | 30.0% | |
!! | GTTTTGGATTAAGTGATGTT+TGG | + | tig0019900:21196-21215 | Msa1377310:CDS | 30.0% |
ATTAAGTGATGTTTGGATTC+AGG | + | tig0019900:21203-21222 | Msa1377310:CDS | 30.0% | |
GGTGATGCATTCAATTAAAA+TGG | - | tig0019900:21480-21499 | None:intergenic | 30.0% | |
! | AAACTTTTCTTCTACATTGG+AGG | - | tig0019900:21511-21530 | None:intergenic | 30.0% |
! | AGAAGAAAAGTTTTCTTCCT+TGG | + | tig0019900:21518-21537 | Msa1377310:intron | 30.0% |
TATGATTCCAGATAGGATTT+AGG | + | tig0019900:21718-21737 | Msa1377310:intron | 30.0% | |
! | CGTTAAGAGGTTAATTTTGT+TGG | + | tig0019900:21785-21804 | Msa1377310:intron | 30.0% |
! | TAAGAGGTTAATTTTGTTGG+TGG | + | tig0019900:21788-21807 | Msa1377310:intron | 30.0% |
! | AAGAGGTTAATTTTGTTGGT+GGG | + | tig0019900:21789-21808 | Msa1377310:intron | 30.0% |
AACTGGTATTGTAGAAAATG+AGG | - | tig0019900:21976-21995 | None:intergenic | 30.0% | |
! | TCATTTTCTACAATACCAGT+TGG | + | tig0019900:21975-21994 | Msa1377310:intron | 30.0% |
!! | GTTTTGAATCAAGCGAATTT+TGG | + | tig0019900:22022-22041 | Msa1377310:intron | 30.0% |
! | TGGAGTTGTGTAAGAATTTT+TGG | + | tig0019900:22042-22061 | Msa1377310:intron | 30.0% |
!! | AGTTGTGTAAGAATTTTTGG+TGG | + | tig0019900:22045-22064 | Msa1377310:intron | 30.0% |
!!! | GTTGTGTAAGAATTTTTGGT+GGG | + | tig0019900:22046-22065 | Msa1377310:intron | 30.0% |
AAAATAAGCAACAATTGGGA+GGG | + | tig0019900:22355-22374 | Msa1377310:intron | 30.0% | |
AATCAAGAATGAAGTCATGA+TGG | + | tig0019900:22401-22420 | Msa1377310:intron | 30.0% | |
!! | GAAGCATTTTGATAAATCCA+TGG | + | tig0019900:22453-22472 | Msa1377310:intron | 30.0% |
TTCTTTCAAGGAGTGAAAAA+CGG | - | tig0019900:22826-22845 | None:intergenic | 30.0% | |
! | TAACAAAGCTAGTTCTTTCA+AGG | - | tig0019900:22838-22857 | None:intergenic | 30.0% |
!! | GTTTTGGGTAAAATTATTGC+AGG | + | tig0019900:22886-22905 | Msa1377310:intron | 30.0% |
GATAAATCTGATACCAATGA+TGG | + | tig0019900:23073-23092 | Msa1377310:intron | 30.0% | |
! | AATATTTTCAATGTACCTGC+CGG | - | tig0019900:23120-23139 | None:intergenic | 30.0% |
CTACAAATCAAATTAGACGA+GGG | - | tig0019900:23145-23164 | None:intergenic | 30.0% | |
TCTACAAATCAAATTAGACG+AGG | - | tig0019900:23146-23165 | None:intergenic | 30.0% | |
!! | TTGATTTGTGTGATTTGTCT+AGG | + | tig0019900:23211-23230 | Msa1377310:intron | 30.0% |
! | TGATTTGTGTGATTTGTCTA+GGG | + | tig0019900:23212-23231 | Msa1377310:intron | 30.0% |
CTGATTGATAAATAGCAACA+TGG | + | tig0019900:23446-23465 | Msa1377310:intron | 30.0% | |
TTGATAAATAGCAACATGGT+AGG | + | tig0019900:23450-23469 | Msa1377310:intron | 30.0% | |
GTTGCAAGTAAATTTGTATG+AGG | + | tig0019900:23481-23500 | Msa1377310:intron | 30.0% | |
AAGCCTAATTCAAATGTCTT+TGG | + | tig0019900:23714-23733 | Msa1377310:intron | 30.0% | |
AGTCCAAAGACATTTGAATT+AGG | - | tig0019900:23720-23739 | None:intergenic | 30.0% | |
ATTCAAATGTCTTTGGACTT+TGG | + | tig0019900:23721-23740 | Msa1377310:intron | 30.0% | |
! | TTTCATATACACACCCTTTT+GGG | - | tig0019900:23762-23781 | None:intergenic | 30.0% |
! | TTTTCATATACACACCCTTT+TGG | - | tig0019900:23763-23782 | None:intergenic | 30.0% |
ATCCAAATCCAATCCAAATT+AGG | + | tig0019900:23789-23808 | Msa1377310:intron | 30.0% | |
ATGACAACAATTGTAAGCAA+AGG | - | tig0019900:23825-23844 | None:intergenic | 30.0% | |
CGCTTAATTAACAGAATTTG+AGG | + | tig0019900:23935-23954 | Msa1377310:intron | 30.0% | |
TACAGCAACATACAGAATAT+AGG | + | tig0019900:24103-24122 | Msa1377310:intron | 30.0% | |
ATGAAAAATGACAATGCAGT+AGG | + | tig0019900:24176-24195 | Msa1377310:intron | 30.0% | |
TGAAAAATGACAATGCAGTA+GGG | + | tig0019900:24177-24196 | Msa1377310:intron | 30.0% | |
!!! | TTTTAAGTTACGTCCTTAGA+AGG | - | tig0019900:24267-24286 | None:intergenic | 30.0% |
CGTAACTTAAAAGTGATGAA+TGG | + | tig0019900:24275-24294 | Msa1377310:intron | 30.0% | |
! | AGTTGGTTACATTTGTTAGA+GGG | - | tig0019900:24340-24359 | None:intergenic | 30.0% |
! | ATTTTACTAAAAAGGGGAGT+TGG | - | tig0019900:24357-24376 | None:intergenic | 30.0% |
!! | GCAGCTATTTTACTAAAAAG+GGG | - | tig0019900:24363-24382 | None:intergenic | 30.0% |
ATATATTAGGTACAGGGTTT+GGG | - | tig0019900:24391-24410 | None:intergenic | 30.0% | |
TATATATTAGGTACAGGGTT+TGG | - | tig0019900:24392-24411 | None:intergenic | 30.0% | |
GAAGCTATATATTAGGTACA+GGG | - | tig0019900:24397-24416 | None:intergenic | 30.0% | |
TCATCACGAAGCTATATATT+AGG | - | tig0019900:24404-24423 | None:intergenic | 30.0% | |
ATTTGTCAAATCCAATTCAC+AGG | + | tig0019900:24644-24663 | Msa1377310:intron | 30.0% | |
CAGTGGATAGTTGAAATTAA+TGG | + | tig0019900:24712-24731 | Msa1377310:CDS | 30.0% | |
! | AAAGAATCTATATCTGGAGT+TGG | - | tig0019900:24742-24761 | None:intergenic | 30.0% |
TTGTTAATGTGACAAAGGTA+CGG | + | tig0019900:24761-24780 | Msa1377310:intron | 30.0% | |
ACACATGTATATTCCATCTT+AGG | - | tig0019900:24843-24862 | None:intergenic | 30.0% | |
AATATACATGTGTATGTGTG+TGG | + | tig0019900:24850-24869 | Msa1377310:intron | 30.0% | |
ATATACATGTGTATGTGTGT+GGG | + | tig0019900:24851-24870 | Msa1377310:intron | 30.0% | |
TTTGAATACACTACACTGAA+TGG | + | tig0019900:24887-24906 | Msa1377310:intron | 30.0% | |
! | ATTTACATTATTGGCCTACA+TGG | + | tig0019900:25278-25297 | Msa1377310:CDS | 30.0% |
! | TTTACATTATTGGCCTACAT+GGG | + | tig0019900:25279-25298 | Msa1377310:CDS | 30.0% |
! | AGTTATAAAGCAATCGATTC+AGG | + | tig0019900:25595-25614 | Msa1377310:three_prime_UTR | 30.0% |
TGCAACATTATTTAACCCAT+TGG | + | tig0019900:25643-25662 | Msa1377310:three_prime_UTR | 30.0% | |
! | ACTTCTCTTTGCCTTTTATT+TGG | + | tig0019900:25759-25778 | Msa1377310:three_prime_UTR | 30.0% |
TCATTCAATGGAAGATCCAT+CGG | + | tig0019900:8106-8125 | Msa1377310:exon | 35.0% | |
AATTTCCATGGATAAGTCGT+CGG | - | tig0019900:8177-8196 | None:intergenic | 35.0% | |
!!! | GCTTTGGTTTTGAATTTTGC+AGG | + | tig0019900:8474-8493 | Msa1377310:intron | 35.0% |
TTACATGATAGTTCCACGTT+TGG | + | tig0019900:8745-8764 | Msa1377310:intron | 35.0% | |
TAGCATGTTACATTGCTCTT+GGG | - | tig0019900:9032-9051 | None:intergenic | 35.0% | |
GGTGTGTAAATGACCAAAAT+GGG | + | tig0019900:9277-9296 | Msa1377310:intron | 35.0% | |
GTGTGTAAATGACCAAAATG+GGG | + | tig0019900:9278-9297 | Msa1377310:intron | 35.0% | |
! | TTTTAGTAATGGCCCCATTT+TGG | - | tig0019900:9293-9312 | None:intergenic | 35.0% |
! | TTCTGCAGGTACATGATTTT+GGG | + | tig0019900:9951-9970 | Msa1377310:intron | 35.0% |
GGATTAGAAATCAGAGTTGT+TGG | + | tig0019900:10052-10071 | Msa1377310:CDS | 35.0% | |
AGAGTTGTTGGAAATGATAG+TGG | + | tig0019900:10064-10083 | Msa1377310:CDS | 35.0% | |
! | AAAATATGCAAGAGTGCAAC+AGG | - | tig0019900:10220-10239 | None:intergenic | 35.0% |
! | TGCACTCTTGCATATTTTCT+TGG | + | tig0019900:10222-10241 | Msa1377310:intron | 35.0% |
! | GAGCATTTGATAGTTGTAGA+TGG | + | tig0019900:10286-10305 | Msa1377310:intron | 35.0% |
CTGTAAGTGTTCTCATACTT+TGG | + | tig0019900:10406-10425 | Msa1377310:intron | 35.0% | |
GGTCCATCTACATCAATAAA+GGG | - | tig0019900:10531-10550 | None:intergenic | 35.0% | |
TGGTCCATCTACATCAATAA+AGG | - | tig0019900:10532-10551 | None:intergenic | 35.0% | |
TTTATTGATGTAGATGGACC+AGG | + | tig0019900:10531-10550 | Msa1377310:intron | 35.0% | |
! | TTACTGCCAGGTTTCAATTT+TGG | + | tig0019900:10621-10640 | Msa1377310:intron | 35.0% |
TACTCTTGCTCGTTTAGATA+GGG | + | tig0019900:10648-10667 | Msa1377310:CDS | 35.0% | |
!!! | ACTATTTTTTGATGCAGGGA+TGG | + | tig0019900:10772-10791 | Msa1377310:intron | 35.0% |
!!! | CTATTTTTTGATGCAGGGAT+GGG | + | tig0019900:10773-10792 | Msa1377310:intron | 35.0% |
! | TTGGCATTGGACAAACTATA+AGG | - | tig0019900:10972-10991 | None:intergenic | 35.0% |
TTTGTCCAATGCCAAATTGA+AGG | + | tig0019900:10977-10996 | Msa1377310:intron | 35.0% | |
! | AATATGGCTGGTTAAACAGA+AGG | + | tig0019900:11021-11040 | Msa1377310:intron | 35.0% |
! | ATATGGCTGGTTAAACAGAA+GGG | + | tig0019900:11022-11041 | Msa1377310:intron | 35.0% |
! | GCCAAGAAAATTAGCTTCAT+GGG | + | tig0019900:11067-11086 | Msa1377310:intron | 35.0% |
! | TCCCATGAAGCTAATTTTCT+TGG | - | tig0019900:11071-11090 | None:intergenic | 35.0% |
! | ATCCGCATTCTTTTTACCTT+TGG | + | tig0019900:11311-11330 | Msa1377310:intron | 35.0% |
!!! | TGATTACTTTTCAGGTTGTG+AGG | + | tig0019900:11451-11470 | Msa1377310:intron | 35.0% |
!!! | GATTACTTTTCAGGTTGTGA+GGG | + | tig0019900:11452-11471 | Msa1377310:intron | 35.0% |
GGGCATTAAGTTTCTTCAAA+AGG | + | tig0019900:11472-11491 | Msa1377310:CDS | 35.0% | |
TGGTTATGTAATCGGATATC+GGG | + | tig0019900:12115-12134 | Msa1377310:intron | 35.0% | |
!! | AGCTGACTTTTCTCCATAAA+GGG | + | tig0019900:12162-12181 | Msa1377310:intron | 35.0% |
!! | GGTTCTAAATGTTTATAGGC+TGG | - | tig0019900:12489-12508 | None:intergenic | 35.0% |
! | GCCTATAAACATTTAGAACC+GGG | + | tig0019900:12489-12508 | Msa1377310:CDS | 35.0% |
!! | ACCCGGTTCTAAATGTTTAT+AGG | - | tig0019900:12493-12512 | None:intergenic | 35.0% |
CAATGGTGAAGTAAGTTTGT+TGG | + | tig0019900:12530-12549 | Msa1377310:intron | 35.0% | |
!! | GTGAAGTAAGTTTGTTGGAT+GGG | + | tig0019900:12535-12554 | Msa1377310:intron | 35.0% |
!!! | AAAATTTTTTGGAAGGGGAC+AGG | - | tig0019900:12565-12584 | None:intergenic | 35.0% |
TCACTTTCAATTAGTAGGAG+CGG | + | tig0019900:12860-12879 | Msa1377310:intron | 35.0% | |
GCTTACGATGTACCTAATAT+AGG | + | tig0019900:12932-12951 | Msa1377310:intron | 35.0% | |
!!! | ATGACAAGGAGACTAGTTTT+TGG | + | tig0019900:12959-12978 | Msa1377310:intron | 35.0% |
! | TTTTTCCCATCTTCGATGAT+TGG | + | tig0019900:13134-13153 | Msa1377310:intron | 35.0% |
TGAAACCAATCATCGAAGAT+GGG | - | tig0019900:13142-13161 | None:intergenic | 35.0% | |
TTGAAACCAATCATCGAAGA+TGG | - | tig0019900:13143-13162 | None:intergenic | 35.0% | |
TTACTTTCATGCATTCCTTG+AGG | + | tig0019900:13166-13185 | Msa1377310:intron | 35.0% | |
ATTCCTTGAGGCTACAAAAA+AGG | + | tig0019900:13178-13197 | Msa1377310:intron | 35.0% | |
TTCCTTGAGGCTACAAAAAA+GGG | + | tig0019900:13179-13198 | Msa1377310:intron | 35.0% | |
TTGAACTCTGACATTATTGC+AGG | + | tig0019900:13236-13255 | Msa1377310:intron | 35.0% | |
CATTACTCAATTCCTGAAAC+TGG | + | tig0019900:13260-13279 | Msa1377310:CDS | 35.0% | |
GAATTACAAATTGAAAGGGG+TGG | + | tig0019900:13318-13337 | Msa1377310:CDS | 35.0% | |
!!! | GTGAGAGTTTTATTATGGCT+TGG | + | tig0019900:13366-13385 | Msa1377310:intron | 35.0% |
TGAGGTTAGGATTTCTTCAT+GGG | - | tig0019900:13554-13573 | None:intergenic | 35.0% | |
ATGAGGTTAGGATTTCTTCA+TGG | - | tig0019900:13555-13574 | None:intergenic | 35.0% | |
GTAGTAGACTTGAATGATCA+AGG | + | tig0019900:13677-13696 | Msa1377310:intron | 35.0% | |
ATATTTCCCTATTTCATGGG+TGG | - | tig0019900:13907-13926 | None:intergenic | 35.0% | |
AATATTGCTAACCTGCTGAT+AGG | - | tig0019900:14161-14180 | None:intergenic | 35.0% | |
! | ATACCTGTGAACTTTGTTGT+GGG | - | tig0019900:14324-14343 | None:intergenic | 35.0% |
AATACCTGTGAACTTTGTTG+TGG | - | tig0019900:14325-14344 | None:intergenic | 35.0% | |
GATGGAAAATTGACCACTTA+TGG | - | tig0019900:14706-14725 | None:intergenic | 35.0% | |
!!! | TACCAGCTTGTTTTTTCTTG+TGG | + | tig0019900:14745-14764 | Msa1377310:intron | 35.0% |
AACCACAAGAAAAAACAAGC+TGG | - | tig0019900:14750-14769 | None:intergenic | 35.0% | |
ACTACTGCAACATAGTTATC+TGG | + | tig0019900:14770-14789 | Msa1377310:intron | 35.0% | |
CTGGACTTGTAACTTTGTTA+TGG | + | tig0019900:14789-14808 | Msa1377310:intron | 35.0% | |
! | TGTTTTTCTCACTTGAACTC+CGG | + | tig0019900:14831-14850 | Msa1377310:intron | 35.0% |
AAACAAGACCACAGTGAAAT+CGG | - | tig0019900:14962-14981 | None:intergenic | 35.0% | |
TTGTTTATGTGACAGAACCA+GGG | + | tig0019900:14976-14995 | Msa1377310:CDS | 35.0% | |
TGCAAAAGGTAATTGTCACA+TGG | - | tig0019900:15350-15369 | None:intergenic | 35.0% | |
TTCTTAATTATTGCATGGCG+AGG | - | tig0019900:15399-15418 | None:intergenic | 35.0% | |
TGAAGAAATATCTTGCCTTG+AGG | + | tig0019900:15428-15447 | Msa1377310:CDS | 35.0% | |
TTACACATTCCAACCAATGA+GGG | - | tig0019900:15628-15647 | None:intergenic | 35.0% | |
CATGCATAAATAGGGAAATC+AGG | + | tig0019900:15780-15799 | Msa1377310:intron | 35.0% | |
GTCATATGGATACTAATACC+TGG | + | tig0019900:15826-15845 | Msa1377310:intron | 35.0% | |
GGGTATCTTAGATTATATCC+AGG | - | tig0019900:15847-15866 | None:intergenic | 35.0% | |
ATTATAGCAAGCGTAAAGAC+GGG | + | tig0019900:15909-15928 | Msa1377310:intron | 35.0% | |
! | AGTTAGAAAAGGCACATAGA+TGG | - | tig0019900:15946-15965 | None:intergenic | 35.0% |
CCAAAGTTAACTGTCAACTT+TGG | - | tig0019900:16261-16280 | None:intergenic | 35.0% | |
CCAAAGTTGACAGTTAACTT+TGG | + | tig0019900:16258-16277 | Msa1377310:intron | 35.0% | |
AAGTTGACAGTTAACTTTGG+AGG | + | tig0019900:16261-16280 | Msa1377310:intron | 35.0% | |
!! | TTGGAGGTGTCATTATATCA+TGG | + | tig0019900:16277-16296 | Msa1377310:intron | 35.0% |
AAGTAGCTATTACCCTTAGA+AGG | - | tig0019900:16485-16504 | None:intergenic | 35.0% | |
CATTGAATAAGCACTAACCT+AGG | - | tig0019900:16542-16561 | None:intergenic | 35.0% | |
GTGGTTTCATTATAGACACA+CGG | + | tig0019900:16595-16614 | Msa1377310:intron | 35.0% | |
AATGTTTCTTAGGCTCTGTT+TGG | + | tig0019900:16695-16714 | Msa1377310:intron | 35.0% | |
ATGTTTCTTAGGCTCTGTTT+GGG | + | tig0019900:16696-16715 | Msa1377310:intron | 35.0% | |
!!! | TTTTAGTTCCCCCAAATTAG+GGG | + | tig0019900:16943-16962 | Msa1377310:intron | 35.0% |
TACAAAATCCCCCTAATTTG+GGG | - | tig0019900:16955-16974 | None:intergenic | 35.0% | |
GGAGGGTTTATAAAAAAGGA+AGG | - | tig0019900:17042-17061 | None:intergenic | 35.0% | |
!! | TTGGATTTTGGGAGTTTTGA+GGG | - | tig0019900:17083-17102 | None:intergenic | 35.0% |
!! | TTTGGATTTTGGGAGTTTTG+AGG | - | tig0019900:17084-17103 | None:intergenic | 35.0% |
! | TGTTTCATGACCTTGTTTGA+TGG | + | tig0019900:17276-17295 | Msa1377310:intron | 35.0% |
GATGATAAATAAGGGGAATC+AGG | - | tig0019900:17410-17429 | None:intergenic | 35.0% | |
! | GATTCCCCTTATTTATCATC+TGG | + | tig0019900:17410-17429 | Msa1377310:CDS | 35.0% |
TCATCTGGGTATAAAGATGT+TGG | + | tig0019900:17425-17444 | Msa1377310:CDS | 35.0% | |
GTATAAAGATGTTGGAAGTC+TGG | + | tig0019900:17433-17452 | Msa1377310:CDS | 35.0% | |
!! | GTTGATGATTTATCAGCTGA+TGG | + | tig0019900:17626-17645 | Msa1377310:CDS | 35.0% |
!!! | TTTTTCTAGCTTGGTTTCCT+CGG | - | tig0019900:17681-17700 | None:intergenic | 35.0% |
GAAACCAAGCTAGAAAAATC+AGG | + | tig0019900:17683-17702 | Msa1377310:CDS | 35.0% | |
AGGAGTCATTAAGAACCATA+GGG | - | tig0019900:17926-17945 | None:intergenic | 35.0% | |
AAAAGATAGCAACACATCAG+AGG | - | tig0019900:18087-18106 | None:intergenic | 35.0% | |
TAAGAAAGATTTACCTCTCC+AGG | - | tig0019900:18131-18150 | None:intergenic | 35.0% | |
ATCATATGATCCATCTGCTT+TGG | + | tig0019900:18276-18295 | Msa1377310:CDS | 35.0% | |
TCATATGATCCATCTGCTTT+GGG | + | tig0019900:18277-18296 | Msa1377310:CDS | 35.0% | |
TTCATCATCAAAAGTGGATC+GGG | - | tig0019900:18395-18414 | None:intergenic | 35.0% | |
!!! | CATTTTGACTTGATGGAAAG+AGG | - | tig0019900:18573-18592 | None:intergenic | 35.0% |
CTCTTTCCATCAAGTCAAAA+TGG | + | tig0019900:18571-18590 | Msa1377310:intron | 35.0% | |
!!! | GTAAGACCATTTTGACTTGA+TGG | - | tig0019900:18580-18599 | None:intergenic | 35.0% |
TTAACTCTAACAAGAGATGG+AGG | + | tig0019900:18730-18749 | Msa1377310:intron | 35.0% | |
TTAAATGTGTATGATGTGGG+AGG | + | tig0019900:18809-18828 | Msa1377310:intron | 35.0% | |
TAAATGTGTATGATGTGGGA+GGG | + | tig0019900:18810-18829 | Msa1377310:intron | 35.0% | |
AGGAGATTCTGTTTATCTTG+TGG | + | tig0019900:18933-18952 | Msa1377310:CDS | 35.0% | |
GGAGATTCTGTTTATCTTGT+GGG | + | tig0019900:18934-18953 | Msa1377310:CDS | 35.0% | |
GAAGTTATTGAGCTTGATAC+TGG | + | tig0019900:19066-19085 | Msa1377310:CDS | 35.0% | |
GAGCTTGATACTGGTAAATT+TGG | + | tig0019900:19075-19094 | Msa1377310:intron | 35.0% | |
!! | GATTTTGGTAGTTCGTTTTC+GGG | + | tig0019900:19188-19207 | Msa1377310:intron | 35.0% |
TAAGCACGCAAAAGATTAAC+TGG | - | tig0019900:19279-19298 | None:intergenic | 35.0% | |
! | TAATCTTTTGCGTGCTTACA+TGG | + | tig0019900:19281-19300 | Msa1377310:intron | 35.0% |
! | TGGATCTGGACATTTTTCAT+TGG | + | tig0019900:19305-19324 | Msa1377310:intron | 35.0% |
! | GGATCTGGACATTTTTCATT+GGG | + | tig0019900:19306-19325 | Msa1377310:intron | 35.0% |
! | AAGGTGCTCATATTATGCTT+AGG | - | tig0019900:19454-19473 | None:intergenic | 35.0% |
TACTAAAATTTGGGGGATAG+GGG | - | tig0019900:19563-19582 | None:intergenic | 35.0% | |
CTTACTAAAATTTGGGGGAT+AGG | - | tig0019900:19565-19584 | None:intergenic | 35.0% | |
!! | CTCTTGAGGTCTTATTCTAA+TGG | + | tig0019900:19590-19609 | Msa1377310:intron | 35.0% |
!!! | ACCCTATTTTAATCAAGGTC+AGG | + | tig0019900:19649-19668 | Msa1377310:intron | 35.0% |
GTCCTGACCTTGATTAAAAT+AGG | - | tig0019900:19654-19673 | None:intergenic | 35.0% | |
TATAATTATCGACCGCTAGT+TGG | + | tig0019900:19717-19736 | Msa1377310:intron | 35.0% | |
AGTCTGCTTATTCATTAGGT+TGG | - | tig0019900:19767-19786 | None:intergenic | 35.0% | |
CCAAAGTCTGCTTATTCATT+AGG | - | tig0019900:19771-19790 | None:intergenic | 35.0% | |
CCTAATGAATAAGCAGACTT+TGG | + | tig0019900:19768-19787 | Msa1377310:intron | 35.0% | |
TAGAAAGTAAGAAGGAGCAA+TGG | - | tig0019900:20036-20055 | None:intergenic | 35.0% | |
GCAAAAACGGTAAAGAATAG+AGG | + | tig0019900:20342-20361 | Msa1377310:intron | 35.0% | |
AGAGGGAAAAAATAGAGGAA+TGG | + | tig0019900:20360-20379 | Msa1377310:intron | 35.0% | |
GAGGGAAAAAATAGAGGAAT+GGG | + | tig0019900:20361-20380 | Msa1377310:intron | 35.0% | |
TATTATCGCTTCCTCTTATG+TGG | + | tig0019900:20605-20624 | Msa1377310:intron | 35.0% | |
AGAAGATCATCAATTCGTGA+GGG | + | tig0019900:21020-21039 | Msa1377310:CDS | 35.0% | |
TCCTATTTATGCAATAAGCC+AGG | + | tig0019900:21047-21066 | Msa1377310:CDS | 35.0% | |
ACCTGGCTTATTGCATAAAT+AGG | - | tig0019900:21051-21070 | None:intergenic | 35.0% | |
AAGATCATATCTGGTGCAAA+TGG | + | tig0019900:21078-21097 | Msa1377310:CDS | 35.0% | |
AGATCATATCTGGTGCAAAT+GGG | + | tig0019900:21079-21098 | Msa1377310:CDS | 35.0% | |
TTGACACCATTTATGAGAAG+AGG | - | tig0019900:21108-21127 | None:intergenic | 35.0% | |
ACATTCCATAAGACTGTTAG+AGG | - | tig0019900:21396-21415 | None:intergenic | 35.0% | |
! | CTACGAATCTAGGATCATTA+AGG | - | tig0019900:21453-21472 | None:intergenic | 35.0% |
AAATGGAAAGCTACGAATCT+AGG | - | tig0019900:21463-21482 | None:intergenic | 35.0% | |
! | GAAAAGTTTTCTTCCTTGGA+TGG | + | tig0019900:21522-21541 | Msa1377310:intron | 35.0% |
! | GCTTTTATATCAACCATCCA+AGG | - | tig0019900:21538-21557 | None:intergenic | 35.0% |
!! | GGTTGATATAAAAGCCCTTT+TGG | + | tig0019900:21543-21562 | Msa1377310:intron | 35.0% |
CTCTACATATGATTCCAGAT+AGG | + | tig0019900:21711-21730 | Msa1377310:intron | 35.0% | |
ACAACCTACCAATTTCTCAA+AGG | - | tig0019900:21757-21776 | None:intergenic | 35.0% | |
! | TATAGGCAGCATGTCTTATT+GGG | - | tig0019900:21832-21851 | None:intergenic | 35.0% |
TTATAGGCAGCATGTCTTAT+TGG | - | tig0019900:21833-21852 | None:intergenic | 35.0% | |
CAACAGTCCTCTCTATTTAT+AGG | - | tig0019900:21849-21868 | None:intergenic | 35.0% | |
CTATAAATAGAGAGGACTGT+TGG | + | tig0019900:21847-21866 | Msa1377310:intron | 35.0% | |
! | ACCAGTTGGTTTCTATCAAT+TGG | + | tig0019900:21989-22008 | Msa1377310:intron | 35.0% |
ACCAATTGATAGAAACCAAC+TGG | - | tig0019900:21993-22012 | None:intergenic | 35.0% | |
!!! | AAGAATTTTTGGTGGGAAGA+TGG | + | tig0019900:22053-22072 | Msa1377310:intron | 35.0% |
ACCAAATCATGGAATCAACT+CGG | - | tig0019900:22082-22101 | None:intergenic | 35.0% | |
AGCCTACTTGTGACTTATAT+AGG | + | tig0019900:22110-22129 | Msa1377310:intron | 35.0% | |
AGCCTATATAAGTCACAAGT+AGG | - | tig0019900:22115-22134 | None:intergenic | 35.0% | |
! | ATAGGCTGAGCAATATTTTG+AGG | + | tig0019900:22128-22147 | Msa1377310:intron | 35.0% |
!! | TAGGCTGAGCAATATTTTGA+GGG | + | tig0019900:22129-22148 | Msa1377310:intron | 35.0% |
TGCATGAAGAGATGAAACTA+TGG | + | tig0019900:22160-22179 | Msa1377310:intron | 35.0% | |
ATGAAGAGATGAAACTATGG+TGG | + | tig0019900:22163-22182 | Msa1377310:intron | 35.0% | |
TGAAGAGATGAAACTATGGT+GGG | + | tig0019900:22164-22183 | Msa1377310:intron | 35.0% | |
TTTGAAAAACTCCACCAAGA+AGG | - | tig0019900:22258-22277 | None:intergenic | 35.0% | |
!! | TTCTTGGTGGAGTTTTTCAA+AGG | + | tig0019900:22257-22276 | Msa1377310:intron | 35.0% |
TATATTCCAGCCTGATGTTT+GGG | + | tig0019900:22290-22309 | Msa1377310:intron | 35.0% | |
GAAAATAAGCAACAATTGGG+AGG | + | tig0019900:22354-22373 | Msa1377310:intron | 35.0% | |
! | AAAATGCTTCTTTTCCCATG+TGG | - | tig0019900:22443-22462 | None:intergenic | 35.0% |
! | TTATTGGTAGCAATTCTCCA+TGG | - | tig0019900:22473-22492 | None:intergenic | 35.0% |
TGTTTAAGAGCAATTCTCCA+AGG | - | tig0019900:22533-22552 | None:intergenic | 35.0% | |
GAATTGCTCTTAAACAGAGA+TGG | + | tig0019900:22537-22556 | Msa1377310:intron | 35.0% | |
AGAATTACCACGCAAGAAAT+AGG | + | tig0019900:22588-22607 | Msa1377310:intron | 35.0% | |
GAATTACCACGCAAGAAATA+GGG | + | tig0019900:22589-22608 | Msa1377310:intron | 35.0% | |
!! | AGAGGTATTGAGTGGATATT+GGG | - | tig0019900:22668-22687 | None:intergenic | 35.0% |
TTGTCAAGAAAGACCCAATA+AGG | + | tig0019900:22912-22931 | Msa1377310:CDS | 35.0% | |
TTTGCGTGTTAAAGGTTGTT+TGG | + | tig0019900:22943-22962 | Msa1377310:intron | 35.0% | |
! | AGCTTCAGATGACTATTTTC+CGG | + | tig0019900:23098-23117 | Msa1377310:intron | 35.0% |
GCACAACTCGTACAATTAAT+TGG | + | tig0019900:23282-23301 | Msa1377310:CDS | 35.0% | |
ACTCGTACAATTAATTGGTG+TGG | + | tig0019900:23287-23306 | Msa1377310:CDS | 35.0% | |
GACATTTGAATTAGGCTTGT+AGG | - | tig0019900:23712-23731 | None:intergenic | 35.0% | |
! | TTCATATACACACCCTTTTG+GGG | - | tig0019900:23761-23780 | None:intergenic | 35.0% |
TTGTAAGCAAAGGATATCAG+AGG | - | tig0019900:23815-23834 | None:intergenic | 35.0% | |
ATGTGATTGACCATTGATCT+CGG | + | tig0019900:23856-23875 | Msa1377310:intron | 35.0% | |
! | GTTAATTAAGCGTGTTGATC+TGG | - | tig0019900:23927-23946 | None:intergenic | 35.0% |
ATTAACAGAATTTGAGGACC+AGG | + | tig0019900:23941-23960 | Msa1377310:intron | 35.0% | |
! | TGCAATGGAGAGTTAGTTTA+TGG | + | tig0019900:24028-24047 | Msa1377310:intron | 35.0% |
TGACAGTTATACGAAGGATT+AGG | - | tig0019900:24314-24333 | None:intergenic | 35.0% | |
! | GTTGGTTACATTTGTTAGAG+GGG | - | tig0019900:24339-24358 | None:intergenic | 35.0% |
! | GAGTTGGTTACATTTGTTAG+AGG | - | tig0019900:24341-24360 | None:intergenic | 35.0% |
CGAAGCTATATATTAGGTAC+AGG | - | tig0019900:24398-24417 | None:intergenic | 35.0% | |
TACAGACCATATCTATGTAC+AGG | - | tig0019900:24685-24704 | None:intergenic | 35.0% | |
CCATCTTAGGAAGAAAAGAA+AGG | - | tig0019900:24830-24849 | None:intergenic | 35.0% | |
! | CCTTTCTTTTCTTCCTAAGA+TGG | + | tig0019900:24827-24846 | Msa1377310:intron | 35.0% |
ACTGAATGGCATATGTACAT+GGG | + | tig0019900:24901-24920 | Msa1377310:intron | 35.0% | |
ATTATTTCACGAATGTTGGC+AGG | + | tig0019900:25177-25196 | Msa1377310:intron | 35.0% | |
! | TAGAGCATGGAGAATTTGTT+CGG | + | tig0019900:25203-25222 | Msa1377310:CDS | 35.0% |
TTAAACCTCAATTCCCATGT+AGG | - | tig0019900:25295-25314 | None:intergenic | 35.0% | |
TTAATCCAGACACTGGAATT+TGG | + | tig0019900:25311-25330 | Msa1377310:CDS | 35.0% | |
TTGGCATCGTAATGTAATCA+AGG | + | tig0019900:25330-25349 | Msa1377310:CDS | 35.0% | |
TGAATGAGCAGAGTATAGTA+TGG | + | tig0019900:25373-25392 | Msa1377310:exon | 35.0% | |
CAAAGGAACAAACACAAATC+TGG | + | tig0019900:25421-25440 | Msa1377310:three_prime_UTR | 35.0% | |
!! | AGATTTTTGTTTGCTGAACC+TGG | - | tig0019900:25458-25477 | None:intergenic | 35.0% |
AACTTGTCATGTGTCAATCA+TGG | - | tig0019900:25579-25598 | None:intergenic | 35.0% | |
GAAGTGTGTGTTGTCAACTA+TGG | - | tig0019900:8021-8040 | None:intergenic | 40.0% | |
AAACGGTGGATCAATTTCCA+TGG | - | tig0019900:8189-8208 | None:intergenic | 40.0% | |
ATCAACGACAAAACCAGTAG+CGG | - | tig0019900:8333-8352 | None:intergenic | 40.0% | |
! | TTTGTCGTTGATAAACGACG+TGG | + | tig0019900:8341-8360 | Msa1377310:CDS | 40.0% |
AACATAGCTTCAGCAACAAC+AGG | - | tig0019900:8501-8520 | None:intergenic | 40.0% | |
TCTCTATATATCGGATGCAC+TGG | - | tig0019900:8543-8562 | None:intergenic | 40.0% | |
! | AGGAAAAGAGCATGATGAGA+GGG | - | tig0019900:8645-8664 | None:intergenic | 40.0% |
CTAGCATGTTACATTGCTCT+TGG | - | tig0019900:9033-9052 | None:intergenic | 40.0% | |
CACACGCTGCAAATTATGTT+TGG | - | tig0019900:9105-9124 | None:intergenic | 40.0% | |
! | CATAATTTGCAGCGTGTGTT+TGG | + | tig0019900:9107-9126 | Msa1377310:intron | 40.0% |
GGGTGTGTAAATGACCAAAA+TGG | + | tig0019900:9276-9295 | Msa1377310:intron | 40.0% | |
ATGGGGCCATTACTAAAAGA+TGG | + | tig0019900:9295-9314 | Msa1377310:intron | 40.0% | |
! | GCATGAATTTGGAGCTTTCA+CGG | - | tig0019900:9452-9471 | None:intergenic | 40.0% |
GCTAATTGATACACTTCTGC+AGG | + | tig0019900:9937-9956 | Msa1377310:intron | 40.0% | |
! | CTTCTGCAGGTACATGATTT+TGG | + | tig0019900:9950-9969 | Msa1377310:intron | 40.0% |
!! | TGGAAATGATAGTGGTGAGA+AGG | + | tig0019900:10072-10091 | Msa1377310:CDS | 40.0% |
! | CACATCTCTGATTTTGTCTC+TGG | + | tig0019900:10118-10137 | Msa1377310:intron | 40.0% |
AATGCTCCAGAACTCAACTT+GGG | - | tig0019900:10273-10292 | None:intergenic | 40.0% | |
AAATGCTCCAGAACTCAACT+TGG | - | tig0019900:10274-10293 | None:intergenic | 40.0% | |
AGGGTAAATACTAGAAGTCC+TGG | - | tig0019900:10552-10571 | None:intergenic | 40.0% | |
! | ATCTAAACGAGCAAGAGTAC+CGG | - | tig0019900:10647-10666 | None:intergenic | 40.0% |
GTACTCTTGCTCGTTTAGAT+AGG | + | tig0019900:10647-10666 | Msa1377310:CDS | 40.0% | |
! | AAAATCCAACCTGCTCTGAA+AGG | - | tig0019900:10743-10762 | None:intergenic | 40.0% |
AAGAGCCTTCAATTTGGCAT+TGG | - | tig0019900:10985-11004 | None:intergenic | 40.0% | |
! | TATGGCTGGTTAAACAGAAG+GGG | + | tig0019900:11023-11042 | Msa1377310:intron | 40.0% |
! | GGCCAAGAAAATTAGCTTCA+TGG | + | tig0019900:11066-11085 | Msa1377310:intron | 40.0% |
! | TTTGATTTACAGGCAGCATC+TGG | + | tig0019900:11201-11220 | Msa1377310:intron | 40.0% |
TTGATTTACAGGCAGCATCT+GGG | + | tig0019900:11202-11221 | Msa1377310:intron | 40.0% | |
! | TATTGAAGGAGAAGCACGAT+TGG | + | tig0019900:11386-11405 | Msa1377310:intron | 40.0% |
! | ATTGAAGGAGAAGCACGATT+GGG | + | tig0019900:11387-11406 | Msa1377310:intron | 40.0% |
!! | CAGCTGACTTTTCTCCATAA+AGG | + | tig0019900:12161-12180 | Msa1377310:intron | 40.0% |
AATGCAGCGTAAATGATGCA+GGG | - | tig0019900:12300-12319 | None:intergenic | 40.0% | |
AAATGCAGCGTAAATGATGC+AGG | - | tig0019900:12301-12320 | None:intergenic | 40.0% | |
AACAAGCATTCCAGTTTCAC+TGG | - | tig0019900:12356-12375 | None:intergenic | 40.0% | |
! | TGAAACTGGAATGCTTGTTG+TGG | + | tig0019900:12357-12376 | Msa1377310:CDS | 40.0% |
!! | CTTTGATTTGTTTAGGTGCC+AGG | + | tig0019900:12459-12478 | Msa1377310:intron | 40.0% |
AACTTACTTCACCATTGACG+CGG | - | tig0019900:12527-12546 | None:intergenic | 40.0% | |
!! | GGTGAAGTAAGTTTGTTGGA+TGG | + | tig0019900:12534-12553 | Msa1377310:intron | 40.0% |
TTTCACGGTTCTTGTTCTGA+TGG | + | tig0019900:13205-13224 | Msa1377310:intron | 40.0% | |
CAAGTATAGTCTCCAGTTTC+AGG | - | tig0019900:13275-13294 | None:intergenic | 40.0% | |
TTTAGCTGACCCCACTTAAT+GGG | + | tig0019900:13426-13445 | Msa1377310:intron | 40.0% | |
! | AAGCCTTATCCCATTAAGTG+GGG | - | tig0019900:13438-13457 | None:intergenic | 40.0% |
! | CAAGCCTTATCCCATTAAGT+GGG | - | tig0019900:13439-13458 | None:intergenic | 40.0% |
AGGTTAGGATTTCTTCATGG+GGG | - | tig0019900:13552-13571 | None:intergenic | 40.0% | |
GAGGTTAGGATTTCTTCATG+GGG | - | tig0019900:13553-13572 | None:intergenic | 40.0% | |
GCGAGTGTAAGAACTACAAA+TGG | - | tig0019900:13607-13626 | None:intergenic | 40.0% | |
! | CTGTATTTTCAGAGCTTCTC+AGG | - | tig0019900:13652-13671 | None:intergenic | 40.0% |
TGACGTGATCAATCATCACA+TGG | + | tig0019900:13827-13846 | Msa1377310:intron | 40.0% | |
! | TCAATCATCACATGGTGATG+TGG | + | tig0019900:13835-13854 | Msa1377310:intron | 40.0% |
TCATTTGAATAGGCAAACGC+AGG | - | tig0019900:14256-14275 | None:intergenic | 40.0% | |
! | TACCTGTGAACTTTGTTGTG+GGG | - | tig0019900:14323-14342 | None:intergenic | 40.0% |
AAGAGCAACAGAAGCAACTT+GGG | - | tig0019900:14876-14895 | None:intergenic | 40.0% | |
ACAGTGAAATCGGAAGTTTC+TGG | - | tig0019900:14952-14971 | None:intergenic | 40.0% | |
AGAAACTTCCGATTTCACTG+TGG | + | tig0019900:14951-14970 | Msa1377310:CDS | 40.0% | |
CTTGTTTATGTGACAGAACC+AGG | + | tig0019900:14975-14994 | Msa1377310:CDS | 40.0% | |
TTATCTAGGTATGCATACCC+TGG | - | tig0019900:14996-15015 | None:intergenic | 40.0% | |
! | TATAACCAGTACTGGGTTAG+TGG | + | tig0019900:15102-15121 | Msa1377310:intron | 40.0% |
GTTATGACTTAGTGATGCTC+CGG | + | tig0019900:15137-15156 | Msa1377310:intron | 40.0% | |
! | TCACTTGATAGTCATGCACA+AGG | + | tig0019900:15256-15275 | Msa1377310:intron | 40.0% |
! | CACTTGATAGTCATGCACAA+GGG | + | tig0019900:15257-15276 | Msa1377310:intron | 40.0% |
TCTTACAAACCCTCATTGGT+TGG | + | tig0019900:15616-15635 | Msa1377310:intron | 40.0% | |
CTTACACATTCCAACCAATG+AGG | - | tig0019900:15629-15648 | None:intergenic | 40.0% | |
TACATGTTCAAACTCTACGG+TGG | + | tig0019900:16653-16672 | Msa1377310:intron | 40.0% | |
!! | TTTTGGAGGGATGAGATTAG+AGG | + | tig0019900:16745-16764 | Msa1377310:intron | 40.0% |
! | TTTAGTTCCCCCAAATTAGG+GGG | + | tig0019900:16944-16963 | Msa1377310:intron | 40.0% |
ACAAAATCCCCCTAATTTGG+GGG | - | tig0019900:16954-16973 | None:intergenic | 40.0% | |
AGAATGGAGAGATATGAGAG+TGG | - | tig0019900:17008-17027 | None:intergenic | 40.0% | |
GAAGGAAGAAGTGGAAAGAA+TGG | - | tig0019900:17024-17043 | None:intergenic | 40.0% | |
GGAGGGAGGGTTTATAAAAA+AGG | - | tig0019900:17046-17065 | None:intergenic | 40.0% | |
!!! | TGGATTTTGGGAGTTTTGAG+GGG | - | tig0019900:17082-17101 | None:intergenic | 40.0% |
CTTTCATGATCCAAGTAGTG+TGG | + | tig0019900:17215-17234 | Msa1377310:intron | 40.0% | |
TGTTCACCAGTCAAAGAACT+TGG | - | tig0019900:17467-17486 | None:intergenic | 40.0% | |
TCGTGAGATACACACTCTAA+AGG | - | tig0019900:17572-17591 | None:intergenic | 40.0% | |
CTGATGGGATAGTCAAGAAA+CGG | + | tig0019900:17600-17619 | Msa1377310:CDS | 40.0% | |
!!! | TTTTCTAGCTTGGTTTCCTC+GGG | - | tig0019900:17680-17699 | None:intergenic | 40.0% |
CATTAACCCATCATCTGGTA+AGG | - | tig0019900:17711-17730 | None:intergenic | 40.0% | |
!! | CTTACCAGATGATGGGTTAA+TGG | + | tig0019900:17709-17728 | Msa1377310:CDS | 40.0% |
TAGTCCATTAACCCATCATC+TGG | - | tig0019900:17716-17735 | None:intergenic | 40.0% | |
!! | GATGGGTTAATGGACTATCA+AGG | + | tig0019900:17719-17738 | Msa1377310:CDS | 40.0% |
GTCTACTCTTGTGATGTTTG+AGG | + | tig0019900:17790-17809 | Msa1377310:CDS | 40.0% | |
CAGACATTGAAATGCTACAG+TGG | - | tig0019900:17864-17883 | None:intergenic | 40.0% | |
ATGTCTGTATCCATTCCTCT+TGG | + | tig0019900:17877-17896 | Msa1377310:intron | 40.0% | |
AAAAGAGTTGCCAAGAGGAA+TGG | - | tig0019900:17890-17909 | None:intergenic | 40.0% | |
CAGGAGTCATTAAGAACCAT+AGG | - | tig0019900:17927-17946 | None:intergenic | 40.0% | |
TCTTAATGACTCCTGTCTTC+AGG | + | tig0019900:17932-17951 | Msa1377310:intron | 40.0% | |
ACACCATCAAGCATACAAGA+TGG | - | tig0019900:17969-17988 | None:intergenic | 40.0% | |
AGGACAGACTTTCTTTAGCT+TGG | + | tig0019900:18194-18213 | Msa1377310:intron | 40.0% | |
!! | CTTGGTGTCTTCTTTCTTCA+TGG | + | tig0019900:18212-18231 | Msa1377310:intron | 40.0% |
! | ACGAGAGCATAATTGTGAAC+AGG | - | tig0019900:18256-18275 | None:intergenic | 40.0% |
! | GTGTTGAAGTTGATTGCTTC+TGG | + | tig0019900:18696-18715 | Msa1377310:CDS | 40.0% |
ATTTCCTAGAGGTTGCTTGA+AGG | - | tig0019900:18972-18991 | None:intergenic | 40.0% | |
! | GGTAACAACTGATTTCCTAG+AGG | - | tig0019900:18983-19002 | None:intergenic | 40.0% |
! | ATTTAAAGCAGCGCAAGGAT+TGG | - | tig0019900:19004-19023 | None:intergenic | 40.0% |
! | CCTATATTTAAAGCAGCGCA+AGG | - | tig0019900:19009-19028 | None:intergenic | 40.0% |
! | CCTTGCGCTGCTTTAAATAT+AGG | + | tig0019900:19006-19025 | Msa1377310:CDS | 40.0% |
TGCTAACAGATGAACAAGGA+AGG | + | tig0019900:19213-19232 | Msa1377310:CDS | 40.0% | |
GCTAACAGATGAACAAGGAA+GGG | + | tig0019900:19214-19233 | Msa1377310:CDS | 40.0% | |
TCGAGTTCAATTCCAACTAG+CGG | - | tig0019900:19732-19751 | None:intergenic | 40.0% | |
TACTTCAAAAGGCTACCTGA+TGG | + | tig0019900:19985-20004 | Msa1377310:intron | 40.0% | |
GCAATGGCTTATAGACTTCA+AGG | - | tig0019900:20020-20039 | None:intergenic | 40.0% | |
!!! | AATCTTGTTTTGGTGGCGTT+TGG | + | tig0019900:20392-20411 | Msa1377310:intron | 40.0% |
TAAAGACCACACCACATAAG+AGG | - | tig0019900:20619-20638 | None:intergenic | 40.0% | |
CTGTTCCAGCTTAAATTCAG+TGG | + | tig0019900:20988-21007 | Msa1377310:intron | 40.0% | |
TACTGCCACTGAATTTAAGC+TGG | - | tig0019900:20996-21015 | None:intergenic | 40.0% | |
CAGAAGATCATCAATTCGTG+AGG | + | tig0019900:21019-21038 | Msa1377310:CDS | 40.0% | |
GAAGATCATCAATTCGTGAG+GGG | + | tig0019900:21021-21040 | Msa1377310:CDS | 40.0% | |
AAGATCATCAATTCGTGAGG+GGG | + | tig0019900:21022-21041 | Msa1377310:CDS | 40.0% | |
TTATGCAATAAGCCAGGTTC+TGG | + | tig0019900:21053-21072 | Msa1377310:CDS | 40.0% | |
ATATGATCTTGTCCAGAACC+TGG | - | tig0019900:21068-21087 | None:intergenic | 40.0% | |
! | GTTCTGGACAAGATCATATC+TGG | + | tig0019900:21069-21088 | Msa1377310:CDS | 40.0% |
! | CGAGCCTTTGAAAGTAATGT+TGG | - | tig0019900:21174-21193 | None:intergenic | 40.0% |
AGATGCCTCTAACAGTCTTA+TGG | + | tig0019900:21388-21407 | Msa1377310:intron | 40.0% | |
GTCTTATGGAATGTCTCCTT+TGG | + | tig0019900:21402-21421 | Msa1377310:intron | 40.0% | |
! | TCTACATTGGAGGCATACTA+CGG | - | tig0019900:21501-21520 | None:intergenic | 40.0% |
ATTGTCGCCAATTACCTTTG+CGG | + | tig0019900:21607-21626 | Msa1377310:intron | 40.0% | |
AAGCAATCCGCAAAGGTAAT+TGG | - | tig0019900:21617-21636 | None:intergenic | 40.0% | |
GTAATCTAAGCAATCCGCAA+AGG | - | tig0019900:21624-21643 | None:intergenic | 40.0% | |
CCAATTTCTCAAAGGCCAAT+CGG | - | tig0019900:21749-21768 | None:intergenic | 40.0% | |
! | TTGGCCTTTGAGAAATTGGT+AGG | + | tig0019900:21750-21769 | Msa1377310:intron | 40.0% |
GTTGTTCTGTTACCGTTAAG+AGG | + | tig0019900:21772-21791 | Msa1377310:intron | 40.0% | |
CATGCTGCCTATAAATAGAG+AGG | + | tig0019900:21839-21858 | Msa1377310:intron | 40.0% | |
ATTAGTGAGTTATGGCCTTC+TGG | + | tig0019900:21890-21909 | Msa1377310:intron | 40.0% | |
GTCTAACTACCAATACCAGA+AGG | - | tig0019900:21908-21927 | None:intergenic | 40.0% | |
!! | TCTGGTATTGGTAGTTAGAC+AGG | + | tig0019900:21908-21927 | Msa1377310:intron | 40.0% |
AGAAAATGAGGAATACCTCC+CGG | - | tig0019900:21964-21983 | None:intergenic | 40.0% | |
! | GAGTTGATTCCATGATTTGG+TGG | + | tig0019900:22081-22100 | Msa1377310:intron | 40.0% |
!! | TGATTCCATGATTTGGTGGA+AGG | + | tig0019900:22085-22104 | Msa1377310:intron | 40.0% |
TACATTTGCATTGAGACGAG+AGG | + | tig0019900:22191-22210 | Msa1377310:intron | 40.0% | |
TGAGCATTCCAAATCCTTCT+TGG | + | tig0019900:22241-22260 | Msa1377310:intron | 40.0% | |
AAACTCCACCAAGAAGGATT+TGG | - | tig0019900:22252-22271 | None:intergenic | 40.0% | |
AGGCTGGAATATACTGAGAA+TGG | - | tig0019900:22283-22302 | None:intergenic | 40.0% | |
GTATATTCCAGCCTGATGTT+TGG | + | tig0019900:22289-22308 | Msa1377310:intron | 40.0% | |
TTAAACGAGTCCCAAACATC+AGG | - | tig0019900:22303-22322 | None:intergenic | 40.0% | |
CAAGAATGAAGTCATGATGG+TGG | + | tig0019900:22404-22423 | Msa1377310:intron | 40.0% | |
AAATAGGGAATGCAAAGCCA+CGG | + | tig0019900:22604-22623 | Msa1377310:intron | 40.0% | |
TCAAAACTTGGTAGAAACCG+TGG | - | tig0019900:22624-22643 | None:intergenic | 40.0% | |
GGGAACAATCTCTCAAAACT+TGG | - | tig0019900:22636-22655 | None:intergenic | 40.0% | |
GTATTGAGTGGATATTGGGT+GGG | - | tig0019900:22664-22683 | None:intergenic | 40.0% | |
!! | CAGAGGTATTGAGTGGATAT+TGG | - | tig0019900:22669-22688 | None:intergenic | 40.0% |
!! | TGGTTATCAGAGGTATTGAG+TGG | - | tig0019900:22676-22695 | None:intergenic | 40.0% |
! | ATCAAAGGCTGAGCATCTTT+TGG | + | tig0019900:22970-22989 | Msa1377310:intron | 40.0% |
! | GGCAAGCATTTTCAATGTCA+TGG | - | tig0019900:23045-23064 | None:intergenic | 40.0% |
TTCTTGTGGGAACAGATGTT+AGG | + | tig0019900:23249-23268 | Msa1377310:CDS | 40.0% | |
TCTTGTGGGAACAGATGTTA+GGG | + | tig0019900:23250-23269 | Msa1377310:CDS | 40.0% | |
ACAGATGTTAGGGATGGAAA+TGG | + | tig0019900:23260-23279 | Msa1377310:CDS | 40.0% | |
TTGGTGTGGTTGTATAGTTC+AGG | + | tig0019900:23301-23320 | Msa1377310:CDS | 40.0% | |
TCTTGGATTTCTTCCTGAAG+AGG | + | tig0019900:23346-23365 | Msa1377310:CDS | 40.0% | |
CTTGGATTTCTTCCTGAAGA+GGG | + | tig0019900:23347-23366 | Msa1377310:CDS | 40.0% | |
GGGTGTGTATATGAAAACAG+AGG | + | tig0019900:23766-23785 | Msa1377310:intron | 40.0% | |
! | GGCCTAATTTGGATTGGATT+TGG | - | tig0019900:23794-23813 | None:intergenic | 40.0% |
ATCAGAGGCCTAATTTGGAT+TGG | - | tig0019900:23800-23819 | None:intergenic | 40.0% | |
AGGATATCAGAGGCCTAATT+TGG | - | tig0019900:23805-23824 | None:intergenic | 40.0% | |
! | AATTAAGCGTGTTGATCTGG+AGG | - | tig0019900:23924-23943 | None:intergenic | 40.0% |
ATGGTACATGTGTCTGTTTG+TGG | - | tig0019900:23993-24012 | None:intergenic | 40.0% | |
ACTAACTCTCCATTGCACAA+TGG | - | tig0019900:24025-24044 | None:intergenic | 40.0% | |
!! | AGAGAAAGTACTCTCTCTGA+AGG | - | tig0019900:24237-24256 | None:intergenic | 40.0% |
GTTACGTCCTTAGAAGGTTT+GGG | - | tig0019900:24261-24280 | None:intergenic | 40.0% | |
AGTTACGTCCTTAGAAGGTT+TGG | - | tig0019900:24262-24281 | None:intergenic | 40.0% | |
AAGGATTAGGATAGTGAGAG+AGG | - | tig0019900:24301-24320 | None:intergenic | 40.0% | |
TGTCAAATCCAATTCACAGG+TGG | + | tig0019900:24647-24666 | Msa1377310:intron | 40.0% | |
ATGTGTATGTGTGTGGGTAT+CGG | + | tig0019900:24857-24876 | Msa1377310:intron | 40.0% | |
CACTGAATGGCATATGTACA+TGG | + | tig0019900:24900-24919 | Msa1377310:intron | 40.0% | |
TATGTACATGGGTTCGTATG+TGG | + | tig0019900:24912-24931 | Msa1377310:intron | 40.0% | |
ACCTGGTTATTGATCTGACT+TGG | + | tig0019900:25029-25048 | Msa1377310:intron | 40.0% | |
CCTGGTTATTGATCTGACTT+GGG | + | tig0019900:25030-25049 | Msa1377310:intron | 40.0% | |
!!! | CACAAGCTGTTTTTGAGACT+GGG | + | tig0019900:25079-25098 | Msa1377310:intron | 40.0% |
! | AGAGCATGGAGAATTTGTTC+GGG | + | tig0019900:25204-25223 | Msa1377310:CDS | 40.0% |
! | ATGGAGAATTTGTTCGGGTA+AGG | + | tig0019900:25209-25228 | Msa1377310:CDS | 40.0% |
TGCTTCAATGTTAAGACTCG+TGG | - | tig0019900:25256-25275 | None:intergenic | 40.0% | |
TTGAGGTTTAATCCAGACAC+TGG | + | tig0019900:25304-25323 | Msa1377310:CDS | 40.0% | |
TGCTCATTCATACAGAACTG+CGG | - | tig0019900:25363-25382 | None:intergenic | 40.0% | |
ATCATGGCAATGCTCAATCA+TGG | - | tig0019900:25563-25582 | None:intergenic | 40.0% | |
! | ATAAAGCAATCGATTCAGGC+TGG | + | tig0019900:25599-25618 | Msa1377310:three_prime_UTR | 40.0% |
! | AACGGGTGAAGTGTTTATGC+AGG | - | tig0019900:7963-7982 | None:intergenic | 45.0% |
!!! | GGATAAGTCGTCGGTTTTCA+CGG | - | tig0019900:8168-8187 | None:intergenic | 45.0% |
GAAAACCGACGACTTATCCA+TGG | + | tig0019900:8169-8188 | Msa1377310:CDS | 45.0% | |
GGAAATTGATCCACCGTTTC+AGG | + | tig0019900:8190-8209 | Msa1377310:CDS | 45.0% | |
! | GTTACGGCGTTTTCCTGAAA+CGG | - | tig0019900:8206-8225 | None:intergenic | 45.0% |
! | GAGAGATTTTCGCCAGTCTT+CGG | - | tig0019900:8231-8250 | None:intergenic | 45.0% |
AATCGCCATGTTGTTAAGCC+TGG | + | tig0019900:8377-8396 | Msa1377310:CDS | 45.0% | |
GCTTACCAGGCTTAACAACA+TGG | - | tig0019900:8385-8404 | None:intergenic | 45.0% | |
! | CAGGAAAAGAGCATGATGAG+AGG | - | tig0019900:8646-8665 | None:intergenic | 45.0% |
TCAATTGACAGCTCCAAACG+TGG | - | tig0019900:8761-8780 | None:intergenic | 45.0% | |
ATCCAACACTAGCAGCTTCA+GGG | - | tig0019900:10036-10055 | None:intergenic | 45.0% | |
AATCCAACACTAGCAGCTTC+AGG | - | tig0019900:10037-10056 | None:intergenic | 45.0% | |
! | TTGGTACCCAAGTTGAGTTC+TGG | + | tig0019900:10264-10283 | Msa1377310:intron | 45.0% |
!! | TGCCAGGTTTCAATTTTGGC+CGG | + | tig0019900:10625-10644 | Msa1377310:intron | 45.0% |
TACCGGCCAAAATTGAAACC+TGG | - | tig0019900:10630-10649 | None:intergenic | 45.0% | |
TCCCCAGTTATAGATTGGCA+GGG | + | tig0019900:11246-11265 | Msa1377310:CDS | 45.0% | |
TGCCCTGCCAATCTATAACT+GGG | - | tig0019900:11251-11270 | None:intergenic | 45.0% | |
AGTTATAGATTGGCAGGGCA+GGG | + | tig0019900:11251-11270 | Msa1377310:CDS | 45.0% | |
ATGCCAGTTTCTATACCTCG+TGG | + | tig0019900:11521-11540 | Msa1377310:CDS | 45.0% | |
GTACCACGAGGTATAGAAAC+TGG | - | tig0019900:11527-11546 | None:intergenic | 45.0% | |
TATACCTCGTGGTACTCTTC+AGG | + | tig0019900:11532-11551 | Msa1377310:CDS | 45.0% | |
GAGTCTCGTCAAACCCTTTA+TGG | - | tig0019900:12178-12197 | None:intergenic | 45.0% | |
CAGGGCAAGGGAACATTTAA+AGG | - | tig0019900:12282-12301 | None:intergenic | 45.0% | |
!! | TGATTTGTTTAGGTGCCAGG+TGG | + | tig0019900:12462-12481 | Msa1377310:intron | 45.0% |
GGTACATCGTAAGCAGCATT+GGG | - | tig0019900:12926-12945 | None:intergenic | 45.0% | |
AGGTACATCGTAAGCAGCAT+TGG | - | tig0019900:12927-12946 | None:intergenic | 45.0% | |
!!! | CACCCTTTTTTGTAGCCTCA+AGG | - | tig0019900:13184-13203 | None:intergenic | 45.0% |
GTTTAGCTGACCCCACTTAA+TGG | + | tig0019900:13425-13444 | Msa1377310:intron | 45.0% | |
TGACCCCACTTAATGGGATA+AGG | + | tig0019900:13432-13451 | Msa1377310:intron | 45.0% | |
! | CCAAGCCTTATCCCATTAAG+TGG | - | tig0019900:13440-13459 | None:intergenic | 45.0% |
CCACTTAATGGGATAAGGCT+TGG | + | tig0019900:13437-13456 | Msa1377310:intron | 45.0% | |
GGTGATTCCACTCTTTCTGA+AGG | + | tig0019900:13526-13545 | Msa1377310:intron | 45.0% | |
GATTGATCACGTCACATGTC+AGG | - | tig0019900:13821-13840 | None:intergenic | 45.0% | |
ACTGTGCCACCCATGAAATA+GGG | + | tig0019900:13898-13917 | Msa1377310:intron | 45.0% | |
CTTAGTTGCCACTGTGAACT+TGG | + | tig0019900:13982-14001 | Msa1377310:intron | 45.0% | |
ATCACAAGCCAAGTTCACAG+TGG | - | tig0019900:13993-14012 | None:intergenic | 45.0% | |
CTAACCTGCTGATAGGAAAG+AGG | - | tig0019900:14154-14173 | None:intergenic | 45.0% | |
TGTTGTGGGGCTTATGACAA+GGG | - | tig0019900:14310-14329 | None:intergenic | 45.0% | |
TTGTTGTGGGGCTTATGACA+AGG | - | tig0019900:14311-14330 | None:intergenic | 45.0% | |
GAGGGCTGAGTAAACATATC+CGG | - | tig0019900:14853-14872 | None:intergenic | 45.0% | |
AGAGCAACAGAAGCAACTTG+GGG | - | tig0019900:14875-14894 | None:intergenic | 45.0% | |
GAAGAGCAACAGAAGCAACT+TGG | - | tig0019900:14877-14896 | None:intergenic | 45.0% | |
!! | GTTTCTGGCCTGCATTAAAG+TGG | - | tig0019900:14937-14956 | None:intergenic | 45.0% |
CAATTCCACTAACCCAGTAC+TGG | - | tig0019900:15110-15129 | None:intergenic | 45.0% | |
TCATGCACAAGGGTCATTAC+TGG | + | tig0019900:15267-15286 | Msa1377310:intron | 45.0% | |
CATGCACAAGGGTCATTACT+GGG | + | tig0019900:15268-15287 | Msa1377310:intron | 45.0% | |
TTAGGCTCTGTTTGGGAGTT+TGG | + | tig0019900:16703-16722 | Msa1377310:intron | 45.0% | |
ATTGTATTGGAGGAGGAGTC+TGG | - | tig0019900:16922-16941 | None:intergenic | 45.0% | |
TGGAGAGATATGAGAGTGGA+GGG | - | tig0019900:17004-17023 | None:intergenic | 45.0% | |
ATGGAGAGATATGAGAGTGG+AGG | - | tig0019900:17005-17024 | None:intergenic | 45.0% | |
!!! | TTTTGGGAGTTTTGAGGGGA+GGG | - | tig0019900:17078-17097 | None:intergenic | 45.0% |
!!! | ATTTTGGGAGTTTTGAGGGG+AGG | - | tig0019900:17079-17098 | None:intergenic | 45.0% |
TCTCAGTTGTCCACACTACT+TGG | - | tig0019900:17228-17247 | None:intergenic | 45.0% | |
TGACAGTTGATCGCCATGAA+TGG | + | tig0019900:17315-17334 | Msa1377310:CDS | 45.0% | |
AGTCAAAGAACTTGGACGAC+TGG | - | tig0019900:17459-17478 | None:intergenic | 45.0% | |
AGTCGTCCAAGTTCTTTGAC+TGG | + | tig0019900:17458-17477 | Msa1377310:CDS | 45.0% | |
TGTGTGTGAAGGTAACCATC+AGG | + | tig0019900:17502-17521 | Msa1377310:CDS | 45.0% | |
TGAAGGTAACCATCAGGAGT+TGG | + | tig0019900:17508-17527 | Msa1377310:CDS | 45.0% | |
GAGTGTGTATCTCACGACAA+TGG | + | tig0019900:17575-17594 | Msa1377310:CDS | 45.0% | |
TCTCACGACAATGGATCTGA+TGG | + | tig0019900:17584-17603 | Msa1377310:CDS | 45.0% | |
CTCACGACAATGGATCTGAT+GGG | + | tig0019900:17585-17604 | Msa1377310:CDS | 45.0% | |
TATGTCCTTGAATGAACCCG+AGG | + | tig0019900:17661-17680 | Msa1377310:CDS | 45.0% | |
!!! | GGCACCTGATTTTTCTAGCT+TGG | - | tig0019900:17690-17709 | None:intergenic | 45.0% |
! | AGTGACTGATGCATTTGCTG+TGG | - | tig0019900:17756-17775 | None:intergenic | 45.0% |
CCATCAAGCATACAAGATGG+AGG | - | tig0019900:17966-17985 | None:intergenic | 45.0% | |
CCTCCATCTTGTATGCTTGA+TGG | + | tig0019900:17963-17982 | Msa1377310:CDS | 45.0% | |
GCTTTCCCAGTTGAAATTCC+TGG | + | tig0019900:18110-18129 | Msa1377310:CDS | 45.0% | |
CCTCTCCAGGAATTTCAACT+GGG | - | tig0019900:18118-18137 | None:intergenic | 45.0% | |
ACCTCTCCAGGAATTTCAAC+TGG | - | tig0019900:18119-18138 | None:intergenic | 45.0% | |
GTGTCTTCTTTCTTCATGGC+AGG | + | tig0019900:18216-18235 | Msa1377310:intron | 45.0% | |
TCTTCTTTCTTCATGGCAGG+TGG | + | tig0019900:18219-18238 | Msa1377310:intron | 45.0% | |
AAGCTAAACTGGCTACTCCT+TGG | + | tig0019900:18475-18494 | Msa1377310:intron | 45.0% | |
AGCTAAACTGGCTACTCCTT+GGG | + | tig0019900:18476-18495 | Msa1377310:intron | 45.0% | |
TATTGGTCGCTCTGTAACGT+GGG | - | tig0019900:19044-19063 | None:intergenic | 45.0% | |
ATATTGGTCGCTCTGTAACG+TGG | - | tig0019900:19045-19064 | None:intergenic | 45.0% | |
ACGTTACAGAGCGACCAATA+TGG | + | tig0019900:19044-19063 | Msa1377310:CDS | 45.0% | |
GGTGTGCTAACAGATGAACA+AGG | + | tig0019900:19209-19228 | Msa1377310:CDS | 45.0% | |
AAGGAAGGGTCCAAGCTTTA+TGG | + | tig0019900:19228-19247 | Msa1377310:CDS | 45.0% | |
! | AGGAAGGGTCCAAGCTTTAT+GGG | + | tig0019900:19229-19248 | Msa1377310:CDS | 45.0% |
AGAAGCTTCCCCATAAAGCT+TGG | - | tig0019900:19241-19260 | None:intergenic | 45.0% | |
! | CTTTTGCGTGCTTACATGGA+TGG | + | tig0019900:19285-19304 | Msa1377310:intron | 45.0% |
GTAAACACAATCCCTTACCG+TGG | - | tig0019900:19687-19706 | None:intergenic | 45.0% | |
TTCAAAAGGCTACCTGATGG+TGG | + | tig0019900:19988-20007 | Msa1377310:intron | 45.0% | |
TCAAAAGGCTACCTGATGGT+GGG | + | tig0019900:19989-20008 | Msa1377310:intron | 45.0% | |
GTCAAGCACATTCAGGCATT+TGG | - | tig0019900:20308-20327 | None:intergenic | 45.0% | |
AATGCCTGAATGTGCTTGAC+TGG | + | tig0019900:20308-20327 | Msa1377310:intron | 45.0% | |
CTGAATGTGCTTGACTGGAA+GGG | + | tig0019900:20313-20332 | Msa1377310:intron | 45.0% | |
GGAAGGGTGGAAAGCAAAAA+CGG | + | tig0019900:20329-20348 | Msa1377310:intron | 45.0% | |
GTGGCGTTTGGTTGAGAATA+TGG | + | tig0019900:20404-20423 | Msa1377310:intron | 45.0% | |
GGGACACCTCTTCTCATAAA+TGG | + | tig0019900:21099-21118 | Msa1377310:CDS | 45.0% | |
! | CTTTCAAAGGCTCGCAGTTT+TGG | + | tig0019900:21180-21199 | Msa1377310:CDS | 45.0% |
!! | AGACTGTTAGAGGCATCTTC+AGG | - | tig0019900:21386-21405 | None:intergenic | 45.0% |
TAGAGATGACCTAGTCCCAA+AGG | - | tig0019900:21696-21715 | None:intergenic | 45.0% | |
GGTGGATCCTAAATCCTATC+TGG | - | tig0019900:21728-21747 | None:intergenic | 45.0% | |
! | AGGATTTAGGATCCACCGAT+TGG | + | tig0019900:21731-21750 | Msa1377310:intron | 45.0% |
ATTTCTCAAAGGCCAATCGG+TGG | - | tig0019900:21746-21765 | None:intergenic | 45.0% | |
!! | CCGATTGGCCTTTGAGAAAT+TGG | + | tig0019900:21746-21765 | Msa1377310:intron | 45.0% |
!! | GGTGGGTTAGAGAGATAGTT+AGG | + | tig0019900:21806-21825 | Msa1377310:intron | 45.0% |
GAGTTATGGCCTTCTGGTAT+TGG | + | tig0019900:21896-21915 | Msa1377310:intron | 45.0% | |
AAACAATGGCAGAGCTTCGA+GGG | - | tig0019900:21934-21953 | None:intergenic | 45.0% | |
AAAACAATGGCAGAGCTTCG+AGG | - | tig0019900:21935-21954 | None:intergenic | 45.0% | |
!! | CTGCCATTGTTTTGTGATCC+CGG | + | tig0019900:21942-21961 | Msa1377310:intron | 45.0% |
!! | TGCCATTGTTTTGTGATCCC+GGG | + | tig0019900:21943-21962 | Msa1377310:intron | 45.0% |
GAAAATGAGGAATACCTCCC+GGG | - | tig0019900:21963-21982 | None:intergenic | 45.0% | |
!! | GCCGAGTTGATTCCATGATT+TGG | + | tig0019900:22078-22097 | Msa1377310:intron | 45.0% |
GCTTTCCTTCCACCAAATCA+TGG | - | tig0019900:22093-22112 | None:intergenic | 45.0% | |
!! | GCTGAGCAATATTTTGAGGG+CGG | + | tig0019900:22132-22151 | Msa1377310:intron | 45.0% |
! | ATTTGGAATGCTCACCTTCC+AGG | - | tig0019900:22235-22254 | None:intergenic | 45.0% |
GCATTCCAAATCCTTCTTGG+TGG | + | tig0019900:22244-22263 | Msa1377310:intron | 45.0% | |
! | TGCATTCCCTATTTCTTGCG+TGG | - | tig0019900:22598-22617 | None:intergenic | 45.0% |
! | GGTATTGAGTGGATATTGGG+TGG | - | tig0019900:22665-22684 | None:intergenic | 45.0% |
AGCGCATAGTTGGTTATCAG+AGG | - | tig0019900:22686-22705 | None:intergenic | 45.0% | |
! | GCAAAACCTGTCGCCTTATT+GGG | - | tig0019900:22928-22947 | None:intergenic | 45.0% |
! | CGACAGGTTTTGCGTGTTAA+AGG | + | tig0019900:22935-22954 | Msa1377310:intron | 45.0% |
CGTGTTAAAGGTTGTTTGGC+TGG | + | tig0019900:22947-22966 | Msa1377310:intron | 45.0% | |
AGGTTGTTTGGCTGGATCAA+AGG | + | tig0019900:22955-22974 | Msa1377310:intron | 45.0% | |
!!! | CTGAGCATCTTTTGGAGCAA+GGG | + | tig0019900:22978-22997 | Msa1377310:intron | 45.0% |
!!! | TGAGCATCTTTTGGAGCAAG+GGG | + | tig0019900:22979-22998 | Msa1377310:intron | 45.0% |
! | ATGTCATGGAAGCATGTGAC+AGG | - | tig0019900:23031-23050 | None:intergenic | 45.0% |
! | CATCTGAAGCTTGCCATCAT+TGG | - | tig0019900:23089-23108 | None:intergenic | 45.0% |
! | TCAGATGACTATTTTCCGGC+AGG | + | tig0019900:23102-23121 | Msa1377310:intron | 45.0% |
ACGAGAGGTTGAACTTCTTG+TGG | + | tig0019900:23235-23254 | Msa1377310:CDS | 45.0% | |
CGAGAGGTTGAACTTCTTGT+GGG | + | tig0019900:23236-23255 | Msa1377310:CDS | 45.0% | |
AGTTCAGGATCCACATTCAG+CGG | + | tig0019900:23316-23335 | Msa1377310:CDS | 45.0% | |
TTTCTTCCTGAAGAGGGTCA+TGG | + | tig0019900:23353-23372 | Msa1377310:CDS | 45.0% | |
TATACACCATGACCCTCTTC+AGG | - | tig0019900:23362-23381 | None:intergenic | 45.0% | |
TCTGTGTAGACCGAGATCAA+TGG | - | tig0019900:23869-23888 | None:intergenic | 45.0% | |
TTGATCTCGGTCTACACAGA+TGG | + | tig0019900:23869-23888 | Msa1377310:intron | 45.0% | |
CACAGATGGAAGGTCTGAAT+CGG | + | tig0019900:23883-23902 | Msa1377310:intron | 45.0% | |
TGCACAATGGTATGGAACGA+TGG | - | tig0019900:24012-24031 | None:intergenic | 45.0% | |
CGTTCCATACCATTGTGCAA+TGG | + | tig0019900:24013-24032 | Msa1377310:intron | 45.0% | |
CTCTCCATTGCACAATGGTA+TGG | - | tig0019900:24020-24039 | None:intergenic | 45.0% | |
TTCTCTGCCCAAACCTTCTA+AGG | + | tig0019900:24251-24270 | Msa1377310:intron | 45.0% | |
GGGGAATGACAGTTATACGA+AGG | - | tig0019900:24320-24339 | None:intergenic | 45.0% | |
!! | CAATTCACAGGTGGTGTCAT+GGG | + | tig0019900:24656-24675 | Msa1377310:intron | 45.0% |
GGGAGTCCTGTACATAGATA+TGG | + | tig0019900:24676-24695 | Msa1377310:CDS | 45.0% | |
ATGGTCTGTATGCTCTTCAG+TGG | + | tig0019900:24695-24714 | Msa1377310:CDS | 45.0% | |
CCCAAGTCAGATCAATAACC+AGG | - | tig0019900:25033-25052 | None:intergenic | 45.0% | |
! | GACTTGGGTCAAAGTGTTTG+AGG | + | tig0019900:25045-25064 | Msa1377310:intron | 45.0% |
CCAGTCTCAAAAACAGCTTG+TGG | - | tig0019900:25081-25100 | None:intergenic | 45.0% | |
!!! | CCACAAGCTGTTTTTGAGAC+TGG | + | tig0019900:25078-25097 | Msa1377310:intron | 45.0% |
GTAAGGACAGTTCACCTCAA+CGG | + | tig0019900:25226-25245 | Msa1377310:CDS | 45.0% | |
TAAGGACAGTTCACCTCAAC+GGG | + | tig0019900:25227-25246 | Msa1377310:CDS | 45.0% | |
! | ATTGGCCTACATGGGAATTG+AGG | + | tig0019900:25287-25306 | Msa1377310:CDS | 45.0% |
CCTTTGCTACTGCATACGTA+GGG | - | tig0019900:25407-25426 | None:intergenic | 45.0% | |
TCCTTTGCTACTGCATACGT+AGG | - | tig0019900:25408-25427 | None:intergenic | 45.0% | |
!! | AAAGCGTTGCAGACACGATT+TGG | + | tig0019900:25480-25499 | Msa1377310:three_prime_UTR | 45.0% |
!!! | TAGTTATTTTTTATTAAATA+TGG | + | tig0019900:11005-11024 | Msa1377310:intron | 5.0% |
!!! | ATTTTATAGTTTTTAATAAT+AGG | - | tig0019900:11696-11715 | None:intergenic | 5.0% |
!! | ATTATAAAATTATCTAAATT+TGG | + | tig0019900:16019-16038 | Msa1377310:intron | 5.0% |
!! | TTATAAAATTATCTAAATTT+GGG | + | tig0019900:16020-16039 | Msa1377310:intron | 5.0% |
!! | AAAAAAAAAAAAAAAAAAAG+AGG | - | tig0019900:21343-21362 | None:intergenic | 5.0% |
CAATGGAAGATCCATCGGAG+CGG | + | tig0019900:8111-8130 | Msa1377310:exon | 50.0% | |
!!! | TAAGTCGTCGGTTTTCACGG+CGG | - | tig0019900:8165-8184 | None:intergenic | 50.0% |
ATACGAAGAACGACGACAGC+AGG | - | tig0019900:8266-8285 | None:intergenic | 50.0% | |
! | AAAACCAGTAGCGGAGCTAG+CGG | - | tig0019900:8324-8343 | None:intergenic | 50.0% |
!! | GCAGCGTGTGTTTGGTTCTA+CGG | + | tig0019900:9115-9134 | Msa1377310:intron | 50.0% |
!! | CAGCGTGTGTTTGGTTCTAC+GGG | + | tig0019900:9116-9135 | Msa1377310:intron | 50.0% |
!! | AGCGTGTGTTTGGTTCTACG+GGG | + | tig0019900:9117-9136 | Msa1377310:intron | 50.0% |
TCCAACACTAGCAGCTTCAG+GGG | - | tig0019900:10035-10054 | None:intergenic | 50.0% | |
GATATGGCTCCTTTCAGAGC+AGG | + | tig0019900:10731-10750 | Msa1377310:intron | 50.0% | |
GGACCAAAGGAGGATCAAGT+GGG | + | tig0019900:11223-11242 | Msa1377310:CDS | 50.0% | |
GTGGGTCCCCAGTTATAGAT+TGG | + | tig0019900:11241-11260 | Msa1377310:CDS | 50.0% | |
GTCCCCAGTTATAGATTGGC+AGG | + | tig0019900:11245-11264 | Msa1377310:CDS | 50.0% | |
GCCCTGCCAATCTATAACTG+GGG | - | tig0019900:11250-11269 | None:intergenic | 50.0% | |
CTGCCCTGCCAATCTATAAC+TGG | - | tig0019900:11252-11271 | None:intergenic | 50.0% | |
CAGTTATAGATTGGCAGGGC+AGG | + | tig0019900:11250-11269 | Msa1377310:CDS | 50.0% | |
!! | TGCACTTGTTGTCTTGCTCC+CGG | - | tig0019900:11292-11311 | None:intergenic | 50.0% |
CAAGAGCTCACCCTTTCCAA+AGG | - | tig0019900:11330-11349 | None:intergenic | 50.0% | |
!! | CAAACCTGAAGAGTACCACG+AGG | - | tig0019900:11539-11558 | None:intergenic | 50.0% |
GCGTAAATGATGCAGGGCAA+GGG | - | tig0019900:12294-12313 | None:intergenic | 50.0% | |
AGCGTAAATGATGCAGGGCA+AGG | - | tig0019900:12295-12314 | None:intergenic | 50.0% | |
AGCATTCCAGTTTCACTGGC+AGG | - | tig0019900:12352-12371 | None:intergenic | 50.0% | |
TGTTTATAGGCTGGACCACC+TGG | - | tig0019900:12480-12499 | None:intergenic | 50.0% | |
! | TCGTAAGCAGCATTGGGTGT+GGG | - | tig0019900:12920-12939 | None:intergenic | 50.0% |
! | ATCGTAAGCAGCATTGGGTG+TGG | - | tig0019900:12921-12940 | None:intergenic | 50.0% |
TTTCATGGGTGGCACAGTGA+GGG | - | tig0019900:13896-13915 | None:intergenic | 50.0% | |
ATTTCATGGGTGGCACAGTG+AGG | - | tig0019900:13897-13916 | None:intergenic | 50.0% | |
CACTGTGCCACCCATGAAAT+AGG | + | tig0019900:13897-13916 | Msa1377310:intron | 50.0% | |
CCTGCTGATAGGAAAGAGGT+TGG | - | tig0019900:14150-14169 | None:intergenic | 50.0% | |
CCAACCTCTTTCCTATCAGC+AGG | + | tig0019900:14147-14166 | Msa1377310:CDS | 50.0% | |
AGCCCCACAACAAAGTTCAC+AGG | + | tig0019900:14318-14337 | Msa1377310:intron | 50.0% | |
CAACAGAAGCAACTTGGGGA+GGG | - | tig0019900:14871-14890 | None:intergenic | 50.0% | |
GCTATGTGGATCGTCATCGA+AGG | + | tig0019900:15511-15530 | Msa1377310:CDS | 50.0% | |
TGTGGATCGTCATCGAAGGA+AGG | + | tig0019900:15515-15534 | Msa1377310:CDS | 50.0% | |
GCTCTGTTTGGGAGTTTGGA+GGG | + | tig0019900:16707-16726 | Msa1377310:intron | 50.0% | |
CTCTGTTTGGGAGTTTGGAG+GGG | + | tig0019900:16708-16727 | Msa1377310:intron | 50.0% | |
TCTGTTTGGGAGTTTGGAGG+GGG | + | tig0019900:16709-16728 | Msa1377310:intron | 50.0% | |
TATTGGAGGAGGAGTCTGGA+GGG | - | tig0019900:16918-16937 | None:intergenic | 50.0% | |
ATATGAGAGTGGAGGGCTTG+GGG | - | tig0019900:16997-17016 | None:intergenic | 50.0% | |
GATATGAGAGTGGAGGGCTT+GGG | - | tig0019900:16998-17017 | None:intergenic | 50.0% | |
AGATATGAGAGTGGAGGGCT+TGG | - | tig0019900:16999-17018 | None:intergenic | 50.0% | |
!!! | TTTGGGAGTTTTGAGGGGAG+GGG | - | tig0019900:17077-17096 | None:intergenic | 50.0% |
! | CCTTGTTTGATGGCTGCAGT+CGG | + | tig0019900:17286-17305 | Msa1377310:intron | 50.0% |
CACCTCCCCAGATTTACACT+CGG | + | tig0019900:17342-17361 | Msa1377310:CDS | 50.0% | |
ACCTCCCCAGATTTACACTC+GGG | + | tig0019900:17343-17362 | Msa1377310:CDS | 50.0% | |
TCGTCCCGAGTGTAAATCTG+GGG | - | tig0019900:17350-17369 | None:intergenic | 50.0% | |
GTCGTCCCGAGTGTAAATCT+GGG | - | tig0019900:17351-17370 | None:intergenic | 50.0% | |
TGTCGTCCCGAGTGTAAATC+TGG | - | tig0019900:17352-17371 | None:intergenic | 50.0% | |
AAGCAGGCTTAGCAATCCAG+AGG | - | tig0019900:17382-17401 | None:intergenic | 50.0% | |
TTGACTGGTGAACATGCTCG+TGG | + | tig0019900:17473-17492 | Msa1377310:CDS | 50.0% | |
TGACTGGTGAACATGCTCGT+GGG | + | tig0019900:17474-17493 | Msa1377310:CDS | 50.0% | |
AACCATCAGGAGTTGGCTGA+TGG | + | tig0019900:17515-17534 | Msa1377310:CDS | 50.0% | |
GGTTTCCTCGGGTTCATTCA+AGG | - | tig0019900:17669-17688 | None:intergenic | 50.0% | |
TCAGGTGCCTTACCAGATGA+TGG | + | tig0019900:17701-17720 | Msa1377310:CDS | 50.0% | |
CAGGTGCCTTACCAGATGAT+GGG | + | tig0019900:17702-17721 | Msa1377310:CDS | 50.0% | |
AGGAACGTGAACCTGAAGAC+AGG | - | tig0019900:17946-17965 | None:intergenic | 50.0% | |
CCCAGTTGAAATTCCTGGAG+AGG | + | tig0019900:18115-18134 | Msa1377310:CDS | 50.0% | |
CTGCAGAGTTACTTCCAGGT+GGG | + | tig0019900:18326-18345 | Msa1377310:intron | 50.0% | |
GAATCTCCTCGACGTAATGC+CGG | - | tig0019900:18922-18941 | None:intergenic | 50.0% | |
GAAGCCTTCAAGCAACCTCT+AGG | + | tig0019900:18965-18984 | Msa1377310:CDS | 50.0% | |
ATTGGTCGCTCTGTAACGTG+GGG | - | tig0019900:19043-19062 | None:intergenic | 50.0% | |
! | GGAAGGGTCCAAGCTTTATG+GGG | + | tig0019900:19230-19249 | Msa1377310:CDS | 50.0% |
ATGGGGAAGCTTCTCTACTC+AGG | + | tig0019900:19247-19266 | Msa1377310:CDS | 50.0% | |
CGTGCTTACATGGATGGATC+TGG | + | tig0019900:19291-19310 | Msa1377310:intron | 50.0% | |
ACACCAGATTTGGGTGAGCT+TGG | + | tig0019900:19534-19553 | Msa1377310:intron | 50.0% | |
CACCAGATTTGGGTGAGCTT+GGG | + | tig0019900:19535-19554 | Msa1377310:intron | 50.0% | |
CCTTCCAGTCAAGCACATTC+AGG | - | tig0019900:20315-20334 | None:intergenic | 50.0% | |
CCTGAATGTGCTTGACTGGA+AGG | + | tig0019900:20312-20331 | Msa1377310:intron | 50.0% | |
AATGTGCTTGACTGGAAGGG+TGG | + | tig0019900:20316-20335 | Msa1377310:intron | 50.0% | |
TCGCTTCCTCTTATGTGGTG+TGG | + | tig0019900:20610-20629 | Msa1377310:intron | 50.0% | |
CATGTAACATGCCCACCCTA+AGG | + | tig0019900:20740-20759 | Msa1377310:intron | 50.0% | |
ATGCAGCGGCTACAACCTTA+GGG | - | tig0019900:20758-20777 | None:intergenic | 50.0% | |
TATGCAGCGGCTACAACCTT+AGG | - | tig0019900:20759-20778 | None:intergenic | 50.0% | |
TCAGGGCTTTGCTTATGCAG+CGG | - | tig0019900:20772-20791 | None:intergenic | 50.0% | |
TGTCTGACCTATGCTGCCTT+TGG | + | tig0019900:21677-21696 | Msa1377310:intron | 50.0% | |
GTCTGACCTATGCTGCCTTT+GGG | + | tig0019900:21678-21697 | Msa1377310:intron | 50.0% | |
TAGAGAGGACTGTTGGAGTG+AGG | + | tig0019900:21854-21873 | Msa1377310:intron | 50.0% | |
CTCCCGGGATCACAAAACAA+TGG | - | tig0019900:21948-21967 | None:intergenic | 50.0% | |
!! | CATTGTTTTGTGATCCCGGG+AGG | + | tig0019900:21946-21965 | Msa1377310:intron | 50.0% |
TGAGACGAGAGGCTCTTTGT+CGG | + | tig0019900:22202-22221 | Msa1377310:intron | 50.0% | |
CTCTTTGTCGGTGAGTTACC+TGG | + | tig0019900:22214-22233 | Msa1377310:intron | 50.0% | |
TTGTCGGTGAGTTACCTGGA+AGG | + | tig0019900:22218-22237 | Msa1377310:intron | 50.0% | |
CAACAATTGGGAGGGCTAGA+AGG | + | tig0019900:22363-22382 | Msa1377310:intron | 50.0% | |
TGGATATTGGGTGGGAGGTT+GGG | - | tig0019900:22656-22675 | None:intergenic | 50.0% | |
TTGAGTGGATATTGGGTGGG+AGG | - | tig0019900:22661-22680 | None:intergenic | 50.0% | |
GAAAGACTGCAGCGCATAGT+TGG | - | tig0019900:22696-22715 | None:intergenic | 50.0% | |
GAAAGACCCAATAAGGCGAC+AGG | + | tig0019900:22919-22938 | Msa1377310:CDS | 50.0% | |
CGCAAAACCTGTCGCCTTAT+TGG | - | tig0019900:22929-22948 | None:intergenic | 50.0% | |
!!! | GCTGAGCATCTTTTGGAGCA+AGG | + | tig0019900:22977-22996 | Msa1377310:intron | 50.0% |
!!! | TCTTTTGGAGCAAGGGGACA+TGG | + | tig0019900:22985-23004 | Msa1377310:intron | 50.0% |
! | GTGATTTGTCTAGGGACGAG+AGG | + | tig0019900:23220-23239 | Msa1377310:intron | 50.0% |
GTGGGAACAGATGTTAGGGA+TGG | + | tig0019900:23254-23273 | Msa1377310:CDS | 50.0% | |
AGAGGGTCATGGTGTATACG+TGG | + | tig0019900:23364-23383 | Msa1377310:CDS | 50.0% | |
GTCATGGTGTATACGTGGCA+AGG | + | tig0019900:23369-23388 | Msa1377310:CDS | 50.0% | |
TCTCGGTCTACACAGATGGA+AGG | + | tig0019900:23873-23892 | Msa1377310:intron | 50.0% | |
! | GTGTTGATCTGGAGGATGTC+AGG | - | tig0019900:23916-23935 | None:intergenic | 50.0% |
CACGACATAATGCAGATGCC+TGG | - | tig0019900:23962-23981 | None:intergenic | 50.0% | |
!! | AGTGCTCTGTGGGTTAGCTA+GGG | - | tig0019900:24211-24230 | None:intergenic | 50.0% |
AGTGAGGGATGTCGAGAATC+TGG | - | tig0019900:24465-24484 | None:intergenic | 50.0% | |
CAAGCATGCAAGCAAAACGC+TGG | - | tig0019900:24600-24619 | None:intergenic | 50.0% | |
CCATGACACCACCTGTGAAT+TGG | - | tig0019900:24658-24677 | None:intergenic | 50.0% | |
! | CCAATTCACAGGTGGTGTCA+TGG | + | tig0019900:24655-24674 | Msa1377310:intron | 50.0% |
!! | TGTATGTGTGTGGGTATCGG+TGG | + | tig0019900:24860-24879 | Msa1377310:intron | 50.0% |
ACATGGGTTCGTATGTGGCA+AGG | + | tig0019900:24917-24936 | Msa1377310:intron | 50.0% | |
CATGGGTTCGTATGTGGCAA+GGG | + | tig0019900:24918-24937 | Msa1377310:intron | 50.0% | |
TGTTGGCAGGAACTAGAGCA+TGG | + | tig0019900:25190-25209 | Msa1377310:intron | 50.0% | |
CGATGCCAAATTCCAGTGTC+TGG | - | tig0019900:25319-25338 | None:intergenic | 50.0% | |
CCCTACGTATGCAGTAGCAA+AGG | + | tig0019900:25404-25423 | Msa1377310:three_prime_UTR | 50.0% | |
AATCTGGATCTGCGTCTTCC+AGG | + | tig0019900:25437-25456 | Msa1377310:three_prime_UTR | 50.0% | |
AAGCGCTTCATCACTCGACG+TGG | + | tig0019900:7992-8011 | Msa1377310:five_prime_UTR | 55.0% | |
GAAGATCCATCGGAGCGGTT+AGG | + | tig0019900:8116-8135 | Msa1377310:CDS | 55.0% | |
! | ACGGCGTTTTCCTGAAACGG+TGG | - | tig0019900:8203-8222 | None:intergenic | 55.0% |
TCGCCAGTCTTCGGCAGTTA+CGG | - | tig0019900:8222-8241 | None:intergenic | 55.0% | |
CGACAGCAGGAACGACTTTG+CGG | - | tig0019900:8253-8272 | None:intergenic | 55.0% | |
TGCACGGTAACGAGCTTACC+AGG | - | tig0019900:8398-8417 | None:intergenic | 55.0% | |
!! | GCGTGTGTTTGGTTCTACGG+GGG | + | tig0019900:9118-9137 | Msa1377310:intron | 55.0% |
TGGCTCCTTTCAGAGCAGGT+TGG | + | tig0019900:10735-10754 | Msa1377310:intron | 55.0% | |
GGGACCAAAGGAGGATCAAG+TGG | + | tig0019900:11222-11241 | Msa1377310:CDS | 55.0% | |
GGACCCACTTGATCCTCCTT+TGG | - | tig0019900:11229-11248 | None:intergenic | 55.0% | |
TTGTCTTGCTCCCGGCATTC+AGG | - | tig0019900:11284-11303 | None:intergenic | 55.0% | |
AAGGGTTTGACGAGACTCGC+CGG | + | tig0019900:12180-12199 | Msa1377310:CDS | 55.0% | |
!! | TCTCACTTCTGAGGCCAAGC+CGG | - | tig0019900:12202-12221 | None:intergenic | 55.0% |
CCTGCTCTGTCTCACTTCTG+AGG | - | tig0019900:12211-12230 | None:intergenic | 55.0% | |
CCTCAGAAGTGAGACAGAGC+AGG | + | tig0019900:12208-12227 | Msa1377310:CDS | 55.0% | |
GCTTCTCCTGCCAGTGAAAC+TGG | + | tig0019900:12343-12362 | Msa1377310:CDS | 55.0% | |
GATGTCCTTGTCCGCGTCAA+TGG | + | tig0019900:12513-12532 | Msa1377310:CDS | 55.0% | |
CTTCACCATTGACGCGGACA+AGG | - | tig0019900:12521-12540 | None:intergenic | 55.0% | |
ATGGGGGCCTTCAGAAAGAG+TGG | - | tig0019900:13536-13555 | None:intergenic | 55.0% | |
TTCATGGGTGGCACAGTGAG+GGG | - | tig0019900:13895-13914 | None:intergenic | 55.0% | |
GTGGGGCTTATGACAAGGGA+CGG | - | tig0019900:14306-14325 | None:intergenic | 55.0% | |
GCAACAGAAGCAACTTGGGG+AGG | - | tig0019900:14872-14891 | None:intergenic | 55.0% | |
! | AAGGGGTGCACGAGTACCAT+TGG | + | tig0019900:15479-15498 | Msa1377310:CDS | 55.0% |
GGCTCTGTTTGGGAGTTTGG+AGG | + | tig0019900:16706-16725 | Msa1377310:intron | 55.0% | |
TTTGGGAGTTTGGAGGGGGA+GGG | + | tig0019900:16713-16732 | Msa1377310:intron | 55.0% | |
!!! | AGGGAGGGAAGGGTTTTGGA+GGG | + | tig0019900:16732-16751 | Msa1377310:intron | 55.0% |
GTATTGGAGGAGGAGTCTGG+AGG | - | tig0019900:16919-16938 | None:intergenic | 55.0% | |
TATGAGAGTGGAGGGCTTGG+GGG | - | tig0019900:16996-17015 | None:intergenic | 55.0% | |
CCGACTGCAGCCATCAAACA+AGG | - | tig0019900:17289-17308 | None:intergenic | 55.0% | |
! | TTGATGGCTGCAGTCGGTGT+TGG | + | tig0019900:17292-17311 | Msa1377310:intron | 55.0% |
! | GGGGAGGTGCATACCATTCA+TGG | - | tig0019900:17331-17350 | None:intergenic | 55.0% |
TCCCGAGTGTAAATCTGGGG+AGG | - | tig0019900:17347-17366 | None:intergenic | 55.0% | |
TACACTCGGGACGACAGTAC+TGG | + | tig0019900:17356-17375 | Msa1377310:CDS | 55.0% | |
GGGGAATCAGGCTGAAAAGC+AGG | - | tig0019900:17398-17417 | None:intergenic | 55.0% | |
GACTGGTGAACATGCTCGTG+GGG | + | tig0019900:17475-17494 | Msa1377310:CDS | 55.0% | |
ACTGGTGAACATGCTCGTGG+GGG | + | tig0019900:17476-17495 | Msa1377310:CDS | 55.0% | |
CACCATCAGCCAACTCCTGA+TGG | - | tig0019900:17520-17539 | None:intergenic | 55.0% | |
CCAACAGGTCCCAAAGCAGA+TGG | - | tig0019900:18289-18308 | None:intergenic | 55.0% | |
!! | CCATCTGCTTTGGGACCTGT+TGG | + | tig0019900:18286-18305 | Msa1377310:CDS | 55.0% |
! | CGAACGACTGAAGCACCAAC+AGG | - | tig0019900:18304-18323 | None:intergenic | 55.0% |
CGTGCTGCAGAGTTACTTCC+AGG | + | tig0019900:18322-18341 | Msa1377310:CDS | 55.0% | |
GCTGCAGAGTTACTTCCAGG+TGG | + | tig0019900:18325-18344 | Msa1377310:intron | 55.0% | |
AGAAACGAGGCAAACCCACC+TGG | - | tig0019900:18343-18362 | None:intergenic | 55.0% | |
TCAGGACATGCCACAAGCCA+CGG | + | tig0019900:19667-19686 | Msa1377310:intron | 55.0% | |
ACATGCCACAAGCCACGGTA+AGG | + | tig0019900:19672-19691 | Msa1377310:intron | 55.0% | |
CATGCCACAAGCCACGGTAA+GGG | + | tig0019900:19673-19692 | Msa1377310:intron | 55.0% | |
CAATCCCTTACCGTGGCTTG+TGG | - | tig0019900:19680-19699 | None:intergenic | 55.0% | |
!! | AAGGCTACCTGATGGTGGGT+TGG | + | tig0019900:19993-20012 | Msa1377310:intron | 55.0% |
TCAAGGACCAACCCACCATC+AGG | - | tig0019900:20003-20022 | None:intergenic | 55.0% | |
AGCGGCTACAACCTTAGGGT+GGG | - | tig0019900:20754-20773 | None:intergenic | 55.0% | |
CCTAGTCCCAAAGGCAGCAT+AGG | - | tig0019900:21687-21706 | None:intergenic | 55.0% | |
!! | CCTATGCTGCCTTTGGGACT+AGG | + | tig0019900:21684-21703 | Msa1377310:intron | 55.0% |
ACGAGTCCCAAACATCAGGC+TGG | - | tig0019900:22299-22318 | None:intergenic | 55.0% | |
GTGAGCAAGAGCAGCCACAT+GGG | + | tig0019900:22426-22445 | Msa1377310:intron | 55.0% | |
GTGGATATTGGGTGGGAGGT+TGG | - | tig0019900:22657-22676 | None:intergenic | 55.0% | |
AGAGCTCGTACCGCTGAATG+TGG | - | tig0019900:23329-23348 | None:intergenic | 55.0% | |
CATTCAGCGGTACGAGCTCT+TGG | + | tig0019900:23329-23348 | Msa1377310:CDS | 55.0% | |
TCCTCTCCTTGCTCCCCAAA+AGG | + | tig0019900:23745-23764 | Msa1377310:intron | 55.0% | |
CCTCTCCTTGCTCCCCAAAA+GGG | + | tig0019900:23746-23765 | Msa1377310:intron | 55.0% | |
!! | ACACACCCTTTTGGGGAGCA+AGG | - | tig0019900:23754-23773 | None:intergenic | 55.0% |
!! | CAGTGCTCTGTGGGTTAGCT+AGG | - | tig0019900:24212-24231 | None:intergenic | 55.0% |
CTGAAGGAGCAGTGCTCTGT+GGG | - | tig0019900:24221-24240 | None:intergenic | 55.0% | |
TCTGAAGGAGCAGTGCTCTG+TGG | - | tig0019900:24222-24241 | None:intergenic | 55.0% | |
CGTATGTGGCAAGGGTTCTG+TGG | + | tig0019900:24926-24945 | Msa1377310:intron | 55.0% | |
TCCATCGGAGCGGTTAGGAG+CGG | + | tig0019900:8121-8140 | Msa1377310:CDS | 60.0% | |
ACGCCGTAACTGCCGAAGAC+TGG | + | tig0019900:8216-8235 | Msa1377310:CDS | 60.0% | |
! | AGTAGCGGAGCTAGCGGAAG+CGG | - | tig0019900:8318-8337 | None:intergenic | 60.0% |
CTAGCAGCTTCAGGGGCAAG+AGG | - | tig0019900:10028-10047 | None:intergenic | 60.0% | |
GCCCCTGAAGCTGCTAGTGT+TGG | + | tig0019900:10031-10050 | Msa1377310:CDS | 60.0% | |
! | CAGGCAGCATCTGGGACCAA+AGG | + | tig0019900:11210-11229 | Msa1377310:intron | 60.0% |
! | GCAGCATCTGGGACCAAAGG+AGG | + | tig0019900:11213-11232 | Msa1377310:CDS | 60.0% |
! | AGGGCAGTTGGCCTGAATGC+CGG | + | tig0019900:11270-11289 | Msa1377310:CDS | 60.0% |
! | TTTGACGAGACTCGCCGGCT+TGG | + | tig0019900:12185-12204 | Msa1377310:CDS | 60.0% |
ACGCGGACAAGGACATCACC+CGG | - | tig0019900:12510-12529 | None:intergenic | 60.0% | |
GTAGGAGCGGCTCATCGAGA+TGG | + | tig0019900:12873-12892 | Msa1377310:intron | 60.0% | |
!! | CACAGTGAGGGGCGTTAGGA+TGG | - | tig0019900:13884-13903 | None:intergenic | 60.0% |
GGGCTTATGACAAGGGACGG+AGG | - | tig0019900:14303-14322 | None:intergenic | 60.0% | |
GTTTGGGAGTTTGGAGGGGG+AGG | + | tig0019900:16712-16731 | Msa1377310:intron | 60.0% | |
!! | GAGGGAGGGAAGGGTTTTGG+AGG | + | tig0019900:16731-16750 | Msa1377310:intron | 60.0% |
GGAGGAGTCTGGAGGGCTTT+GGG | - | tig0019900:16911-16930 | None:intergenic | 60.0% | |
AGGAGGAGTCTGGAGGGCTT+TGG | - | tig0019900:16912-16931 | None:intergenic | 60.0% | |
ATGAGAGTGGAGGGCTTGGG+GGG | - | tig0019900:16995-17014 | None:intergenic | 60.0% | |
!!! | GAGTTTTGAGGGGAGGGGAG+GGG | - | tig0019900:17072-17091 | None:intergenic | 60.0% |
!!! | GGAGTTTTGAGGGGAGGGGA+GGG | - | tig0019900:17073-17092 | None:intergenic | 60.0% |
CGTGGGGGAGATGTGTGTGA+AGG | + | tig0019900:17491-17510 | Msa1377310:CDS | 60.0% | |
!! | GGCTGATGGTGTCGCTAGCA+TGG | + | tig0019900:17529-17548 | Msa1377310:CDS | 60.0% |
TCAGAGCCGGCATTACGTCG+AGG | + | tig0019900:18913-18932 | Msa1377310:intron | 60.0% | |
CGCCCAAGCTCACCCAAATC+TGG | - | tig0019900:19540-19559 | None:intergenic | 60.0% | |
CAGCGGCTACAACCTTAGGG+TGG | - | tig0019900:20755-20774 | None:intergenic | 60.0% | |
GGTGAGCAAGAGCAGCCACA+TGG | + | tig0019900:22425-22444 | Msa1377310:intron | 60.0% | |
!! | CCCTTTTGGGGAGCAAGGAG+AGG | - | tig0019900:23749-23768 | None:intergenic | 60.0% |
AGACTCGTGGCTTCCCGTTG+AGG | - | tig0019900:25243-25262 | None:intergenic | 60.0% | |
TCCGCTCCTAACCGCTCCGA+TGG | - | tig0019900:8125-8144 | None:intergenic | 65.0% | |
TCGGAGCGGTTAGGAGCGGA+CGG | + | tig0019900:8125-8144 | Msa1377310:CDS | 65.0% | |
!! | GTCGGTTTTCACGGCGGCGA+TGG | - | tig0019900:8159-8178 | None:intergenic | 65.0% |
GCTTCCGCTAGCTCCGCTAC+TGG | + | tig0019900:8317-8336 | Msa1377310:CDS | 65.0% | |
GATTGGCAGGGCAGGGCAGT+TGG | + | tig0019900:11258-11277 | Msa1377310:CDS | 65.0% | |
! | GGGCAGTTGGCCTGAATGCC+GGG | + | tig0019900:11271-11290 | Msa1377310:CDS | 65.0% |
!! | GTGGCACAGTGAGGGGCGTT+AGG | - | tig0019900:13888-13907 | None:intergenic | 65.0% |
GGAGTTTGGAGGGGGAGGGA+GGG | + | tig0019900:16717-16736 | Msa1377310:intron | 65.0% | |
TTTGGAGGGGGAGGGAGGGA+AGG | + | tig0019900:16721-16740 | Msa1377310:intron | 65.0% | |
TTGGAGGGGGAGGGAGGGAA+GGG | + | tig0019900:16722-16741 | Msa1377310:intron | 65.0% | |
! | GGGGAGGGAGGGAAGGGTTT+TGG | + | tig0019900:16728-16747 | Msa1377310:intron | 65.0% |
TTTGAGGGGAGGGGAGGGGA+GGG | - | tig0019900:17068-17087 | None:intergenic | 65.0% | |
!! | TTTTGAGGGGAGGGGAGGGG+AGG | - | tig0019900:17069-17088 | None:intergenic | 65.0% |
!!! | GGGAGTTTTGAGGGGAGGGG+AGG | - | tig0019900:17074-17093 | None:intergenic | 65.0% |
!! | GGGACGACAGTACTGGCCTC+TGG | + | tig0019900:17363-17382 | Msa1377310:CDS | 65.0% |
GGGAGTTTGGAGGGGGAGGG+AGG | + | tig0019900:16716-16735 | Msa1377310:intron | 70.0% | |
TTGAGGGGAGGGGAGGGGAG+GGG | - | tig0019900:17067-17086 | None:intergenic | 70.0% | |
AGGGGAGGGGAGGGGAGGGA+GGG | - | tig0019900:17059-17078 | None:intergenic | 75.0% | |
! | GAGGGGAGGGGAGGGGAGGG+AGG | - | tig0019900:17060-17079 | None:intergenic | 80.0% |
! | GGGGAGGGGAGGGGAGGGGA+GGG | - | tig0019900:17063-17082 | None:intergenic | 80.0% |
! | AGGGGAGGGGAGGGGAGGGG+AGG | - | tig0019900:17064-17083 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019900 | gene | 7881 | 25831 | 7881 | ID=Msa1377310;Name=Msa1377310 |
tig0019900 | mRNA | 7881 | 25831 | 7881 | ID=Msa1377310-mRNA-1;Parent=Msa1377310;Name=Msa1377310-mRNA-1;_AED=0.31;_eAED=0.31;_QI=232|0.83|0.88|0.96|1|1|25|456|1055 |
tig0019900 | exon | 7881 | 8398 | 7881 | ID=Msa1377310-mRNA-1:exon:5570;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 8496 | 8566 | 8496 | ID=Msa1377310-mRNA-1:exon:5571;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 9959 | 10093 | 9959 | ID=Msa1377310-mRNA-1:exon:5572;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 10631 | 10689 | 10631 | ID=Msa1377310-mRNA-1:exon:5573;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 10789 | 10825 | 10789 | ID=Msa1377310-mRNA-1:exon:5574;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 11213 | 11306 | 11213 | ID=Msa1377310-mRNA-1:exon:5575;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 11465 | 11553 | 11465 | ID=Msa1377310-mRNA-1:exon:5576;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 12164 | 12229 | 12164 | ID=Msa1377310-mRNA-1:exon:5577;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 12331 | 12387 | 12331 | ID=Msa1377310-mRNA-1:exon:5578;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 12474 | 12539 | 12474 | ID=Msa1377310-mRNA-1:exon:5579;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 13258 | 13365 | 13258 | ID=Msa1377310-mRNA-1:exon:5580;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 14088 | 14168 | 14088 | ID=Msa1377310-mRNA-1:exon:5581;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 14948 | 14997 | 14948 | ID=Msa1377310-mRNA-1:exon:5582;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 15371 | 15536 | 15371 | ID=Msa1377310-mRNA-1:exon:5583;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 17305 | 17811 | 17305 | ID=Msa1377310-mRNA-1:exon:5584;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 17954 | 18136 | 17954 | ID=Msa1377310-mRNA-1:exon:5585;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 18238 | 18343 | 18238 | ID=Msa1377310-mRNA-1:exon:5586;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 18670 | 18717 | 18670 | ID=Msa1377310-mRNA-1:exon:5587;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 18917 | 19087 | 18917 | ID=Msa1377310-mRNA-1:exon:5588;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 19189 | 19268 | 19189 | ID=Msa1377310-mRNA-1:exon:5589;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 20997 | 21224 | 20997 | ID=Msa1377310-mRNA-1:exon:5590;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 22908 | 22940 | 22908 | ID=Msa1377310-mRNA-1:exon:5591;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 23233 | 23390 | 23233 | ID=Msa1377310-mRNA-1:exon:5592;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 24666 | 24777 | 24666 | ID=Msa1377310-mRNA-1:exon:5593;Parent=Msa1377310-mRNA-1 |
tig0019900 | exon | 25199 | 25831 | 25199 | ID=Msa1377310-mRNA-1:exon:5594;Parent=Msa1377310-mRNA-1 |
tig0019900 | five_prime_UTR | 7881 | 8112 | 7881 | ID=Msa1377310-mRNA-1:five_prime_utr;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 8113 | 8398 | 8113 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 8496 | 8566 | 8496 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 9959 | 10093 | 9959 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 10631 | 10689 | 10631 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 10789 | 10825 | 10789 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 11213 | 11306 | 11213 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 11465 | 11553 | 11465 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 12164 | 12229 | 12164 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 12331 | 12387 | 12331 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 12474 | 12539 | 12474 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 13258 | 13365 | 13258 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 14088 | 14168 | 14088 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 14948 | 14997 | 14948 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 15371 | 15536 | 15371 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 17305 | 17811 | 17305 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 17954 | 18136 | 17954 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 18238 | 18343 | 18238 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 18670 | 18717 | 18670 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 18917 | 19087 | 18917 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 19189 | 19268 | 19189 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 20997 | 21224 | 20997 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 22908 | 22940 | 22908 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 23233 | 23390 | 23233 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 24666 | 24777 | 24666 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | CDS | 25199 | 25375 | 25199 | ID=Msa1377310-mRNA-1:cds;Parent=Msa1377310-mRNA-1 |
tig0019900 | three_prime_UTR | 25376 | 25831 | 25376 | ID=Msa1377310-mRNA-1:three_prime_utr;Parent=Msa1377310-mRNA-1 |
Gene Sequence |
Protein sequence |