Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444040 | sp|Q9ZWR8|ANTA_GENTR | 33.118 | 465 | 248 | 11 | 8 | 411 | 7 | 469 | 4.05e-77 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444040 | F4ZG54 | 78.373 | 467 | 44 | 4 | 1 | 410 | 1 | 467 | 0.0 | 688 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0967780 | Msa1444040 | 0.803693 | 3.085721e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444040 | MtrunA17_Chr3g0087901 | 78.373 | 467 | 44 | 4 | 1 | 410 | 1 | 467 | 0.0 | 688 |
| Msa1444040 | MtrunA17_Chr7g0219331 | 34.490 | 461 | 233 | 12 | 9 | 407 | 98 | 551 | 3.83e-75 | 244 |
| Msa1444040 | MtrunA17_Chr2g0323511 | 32.914 | 477 | 245 | 11 | 6 | 411 | 14 | 486 | 1.12e-72 | 235 |
| Msa1444040 | MtrunA17_Chr2g0323471 | 36.009 | 461 | 237 | 11 | 8 | 411 | 22 | 481 | 6.04e-72 | 233 |
| Msa1444040 | MtrunA17_Chr3g0083761 | 32.766 | 470 | 243 | 10 | 7 | 411 | 4 | 465 | 1.43e-71 | 232 |
| Msa1444040 | MtrunA17_Chr7g0219301 | 33.696 | 460 | 236 | 13 | 9 | 406 | 5 | 457 | 7.14e-70 | 236 |
| Msa1444040 | MtrunA17_Chr7g0219301 | 43.966 | 116 | 60 | 1 | 20 | 130 | 526 | 641 | 1.62e-22 | 100 |
| Msa1444040 | MtrunA17_Chr7g0219301 | 34.028 | 144 | 88 | 5 | 268 | 407 | 741 | 881 | 7.84e-18 | 85.9 |
| Msa1444040 | MtrunA17_Chr6g0455341 | 34.557 | 463 | 234 | 16 | 9 | 410 | 9 | 463 | 7.80e-70 | 227 |
| Msa1444040 | MtrunA17_Chr7g0219291 | 34.829 | 468 | 233 | 10 | 8 | 409 | 356 | 817 | 8.83e-69 | 232 |
| Msa1444040 | MtrunA17_Chr7g0219291 | 27.437 | 277 | 135 | 10 | 181 | 393 | 40 | 314 | 1.14e-15 | 79.3 |
| Msa1444040 | MtrunA17_Chr2g0323421 | 30.556 | 468 | 250 | 9 | 8 | 410 | 55 | 512 | 2.50e-60 | 204 |
| Msa1444040 | MtrunA17_Chr2g0323481 | 30.769 | 442 | 233 | 9 | 35 | 410 | 30 | 464 | 6.67e-59 | 199 |
| Msa1444040 | MtrunA17_Chr6g0455361 | 33.261 | 463 | 237 | 17 | 9 | 410 | 9 | 460 | 7.49e-59 | 198 |
| Msa1444040 | MtrunA17_Chr6g0454761 | 29.913 | 458 | 260 | 10 | 8 | 411 | 8 | 458 | 2.73e-57 | 202 |
| Msa1444040 | MtrunA17_Chr6g0454761 | 30.858 | 431 | 238 | 10 | 35 | 410 | 520 | 945 | 1.91e-54 | 194 |
| Msa1444040 | MtrunA17_Chr8g0339641 | 30.753 | 478 | 253 | 16 | 8 | 411 | 3 | 476 | 1.31e-55 | 190 |
| Msa1444040 | MtrunA17_Chr7g0219121 | 30.722 | 485 | 250 | 15 | 1 | 407 | 1 | 477 | 5.03e-54 | 186 |
| Msa1444040 | MtrunA17_Chr2g0323501 | 29.844 | 449 | 239 | 10 | 31 | 410 | 37 | 478 | 5.42e-52 | 181 |
| Msa1444040 | MtrunA17_Chr6g0455351 | 30.652 | 460 | 221 | 14 | 9 | 410 | 9 | 428 | 4.23e-51 | 177 |
| Msa1444040 | MtrunA17_Chr7g0219241 | 30.193 | 467 | 257 | 10 | 8 | 407 | 9 | 473 | 5.37e-50 | 175 |
| Msa1444040 | MtrunA17_Chr7g0219881 | 39.819 | 221 | 127 | 3 | 7 | 225 | 4 | 220 | 1.53e-44 | 160 |
| Msa1444040 | MtrunA17_Chr7g0219881 | 31.410 | 156 | 98 | 2 | 254 | 409 | 316 | 462 | 2.17e-18 | 87.0 |
| Msa1444040 | MtrunA17_Chr2g0323441 | 45.455 | 176 | 90 | 4 | 8 | 178 | 2 | 176 | 5.49e-42 | 146 |
| Msa1444040 | MtrunA17_Chr7g0219101 | 30.022 | 453 | 248 | 14 | 1 | 407 | 1 | 430 | 1.48e-41 | 152 |
| Msa1444040 | MtrunA17_Chr7g0219211 | 39.207 | 227 | 126 | 5 | 8 | 228 | 9 | 229 | 1.49e-41 | 150 |
| Msa1444040 | MtrunA17_Chr3g0092011 | 36.290 | 248 | 137 | 6 | 9 | 242 | 4 | 244 | 2.36e-38 | 139 |
| Msa1444040 | MtrunA17_Chr3g0124341 | 37.611 | 226 | 126 | 6 | 9 | 225 | 10 | 229 | 4.18e-37 | 140 |
| Msa1444040 | MtrunA17_Chr3g0124341 | 33.775 | 151 | 98 | 1 | 258 | 408 | 325 | 473 | 1.89e-20 | 93.2 |
| Msa1444040 | MtrunA17_Chr7g0219181 | 38.739 | 222 | 124 | 5 | 7 | 222 | 7 | 222 | 4.38e-36 | 137 |
| Msa1444040 | MtrunA17_Chr7g0219181 | 32.075 | 212 | 117 | 4 | 206 | 407 | 281 | 475 | 4.64e-23 | 100 |
| Msa1444040 | MtrunA17_Chr7g0219251 | 40.230 | 174 | 95 | 3 | 7 | 177 | 6 | 173 | 7.56e-35 | 127 |
| Msa1444040 | MtrunA17_Chr7g0219191 | 34.884 | 215 | 130 | 4 | 20 | 228 | 8 | 218 | 2.67e-31 | 119 |
| Msa1444040 | MtrunA17_Chr7g0219351 | 38.125 | 160 | 89 | 3 | 76 | 229 | 14 | 169 | 8.06e-28 | 110 |
| Msa1444040 | MtrunA17_Chr7g0219221 | 39.735 | 151 | 89 | 1 | 259 | 407 | 8 | 158 | 3.25e-23 | 95.5 |
| Msa1444040 | MtrunA17_Chr6g0454741 | 33.784 | 148 | 91 | 4 | 79 | 224 | 23 | 165 | 3.43e-19 | 86.3 |
| Msa1444040 | MtrunA17_Chr7g0219341 | 31.944 | 144 | 93 | 4 | 267 | 407 | 9 | 150 | 1.63e-18 | 82.0 |
| Msa1444040 | MtrunA17_Chr7g0219201 | 36.025 | 161 | 92 | 3 | 254 | 407 | 46 | 202 | 5.93e-18 | 82.0 |
| Msa1444040 | MtrunA17_Chr3g0134041 | 24.490 | 441 | 281 | 11 | 1 | 396 | 1 | 434 | 2.94e-17 | 83.6 |
| Msa1444040 | MtrunA17_Chr3g0123061 | 26.277 | 411 | 242 | 18 | 22 | 396 | 16 | 401 | 7.97e-17 | 82.0 |
| Msa1444040 | MtrunA17_Chr7g0219311 | 34.146 | 123 | 76 | 4 | 269 | 388 | 23 | 143 | 9.73e-16 | 73.9 |
| Msa1444040 | MtrunA17_Chr3g0092001 | 31.967 | 122 | 81 | 1 | 289 | 410 | 1 | 120 | 3.85e-13 | 65.9 |
| Msa1444040 | MtrunA17_Chr8g0361771 | 23.529 | 391 | 236 | 18 | 16 | 359 | 11 | 385 | 1.27e-11 | 66.2 |
| Msa1444040 | MtrunA17_Chr7g0253541 | 32.484 | 157 | 88 | 7 | 67 | 219 | 60 | 202 | 7.56e-11 | 63.5 |
| Msa1444040 | MtrunA17_Chr8g0376891 | 23.342 | 407 | 256 | 17 | 19 | 383 | 13 | 405 | 9.37e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444040 | AT1G03940.1 | 33.836 | 464 | 242 | 13 | 9 | 411 | 9 | 468 | 1.38e-71 | 232 |
| Msa1444040 | AT3G29670.1 | 33.478 | 460 | 233 | 11 | 8 | 407 | 3 | 449 | 5.17e-67 | 220 |
| Msa1444040 | AT5G39090.1 | 33.407 | 452 | 242 | 11 | 8 | 408 | 5 | 448 | 6.73e-60 | 201 |
| Msa1444040 | AT3G29635.1 | 32.579 | 442 | 223 | 11 | 29 | 408 | 27 | 455 | 1.64e-57 | 195 |
| Msa1444040 | AT5G61160.1 | 30.968 | 465 | 234 | 18 | 8 | 404 | 3 | 448 | 1.24e-47 | 169 |
| Msa1444040 | AT3G29590.1 | 28.446 | 457 | 256 | 13 | 8 | 408 | 8 | 449 | 9.99e-47 | 166 |
| Msa1444040 | AT3G29680.1 | 31.828 | 443 | 222 | 13 | 29 | 408 | 23 | 448 | 2.08e-46 | 166 |
| Msa1444040 | AT1G03495.1 | 32.733 | 333 | 170 | 10 | 10 | 289 | 10 | 341 | 9.29e-41 | 148 |
| Msa1444040 | AT5G39080.1 | 36.652 | 221 | 132 | 3 | 8 | 227 | 5 | 218 | 2.19e-35 | 136 |
| Msa1444040 | AT5G39080.1 | 40.650 | 123 | 71 | 2 | 276 | 397 | 330 | 451 | 5.77e-21 | 95.1 |
| Msa1444040 | AT5G39050.1 | 38.710 | 217 | 125 | 3 | 8 | 223 | 10 | 219 | 3.72e-29 | 119 |
| Msa1444040 | AT5G39050.1 | 34.211 | 152 | 99 | 1 | 259 | 409 | 318 | 469 | 7.88e-24 | 103 |
| Msa1444040 | AT5G67150.1 | 25.837 | 418 | 238 | 16 | 37 | 397 | 31 | 433 | 1.08e-20 | 94.0 |
| Msa1444040 | AT3G50270.1 | 24.773 | 440 | 256 | 15 | 10 | 391 | 7 | 429 | 1.65e-17 | 84.7 |
| Msa1444040 | AT3G50280.1 | 25.250 | 400 | 224 | 18 | 16 | 359 | 12 | 392 | 1.30e-16 | 81.6 |
| Msa1444040 | AT5G23940.1 | 30.000 | 210 | 128 | 7 | 13 | 215 | 10 | 207 | 4.10e-16 | 80.5 |
| Msa1444040 | AT5G41040.2 | 23.454 | 388 | 226 | 12 | 64 | 399 | 66 | 434 | 2.97e-15 | 77.8 |
| Msa1444040 | AT3G29720.1 | 40.367 | 109 | 58 | 2 | 104 | 212 | 26 | 127 | 3.22e-15 | 74.7 |
| Msa1444040 | AT3G50300.1 | 24.306 | 432 | 260 | 13 | 8 | 387 | 4 | 420 | 3.72e-15 | 77.4 |
| Msa1444040 | AT5G41040.1 | 23.454 | 388 | 226 | 12 | 64 | 399 | 82 | 450 | 5.30e-15 | 77.0 |
| Msa1444040 | AT5G07860.1 | 23.371 | 445 | 284 | 17 | 1 | 397 | 1 | 436 | 2.33e-13 | 72.0 |
| Msa1444040 | AT1G31490.1 | 30.065 | 153 | 87 | 3 | 34 | 186 | 39 | 171 | 1.88e-11 | 65.9 |
Find 75 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCTATGAATTGAATTT+TGG | 0.115572 | tig0030651:+2946 | Msa1444040:CDS |
| TGTGAAGATGTTACACATTT+TGG | 0.153377 | tig0030651:+2661 | Msa1444040:CDS |
| ATTGACATCTCTTGAGTAAT+TGG | 0.172460 | tig0030651:-2093 | None:intergenic |
| AGAGGGTAAGAAGTGGATTT+TGG | 0.173282 | tig0030651:+2864 | Msa1444040:CDS |
| AATCACATTTCGATCATAAA+AGG | 0.188702 | tig0030651:-2348 | None:intergenic |
| GAAAGAGATTGTTTAAGTTT+TGG | 0.217082 | tig0030651:-1927 | None:intergenic |
| TTTGAGGGTGGAATTGAAAT+AGG | 0.225593 | tig0030651:+3045 | Msa1444040:CDS |
| ATAACATCATTCCCAAATTA+TGG | 0.228264 | tig0030651:+2194 | Msa1444040:CDS |
| CCAATGGAAAAGCCATAATT+TGG | 0.237620 | tig0030651:-2206 | None:intergenic |
| AATTCATAGAGTTTCAATTT+TGG | 0.239339 | tig0030651:-2937 | None:intergenic |
| GAAAAGATTTGTTGCAAGTT+TGG | 0.242001 | tig0030651:-2134 | None:intergenic |
| CATGTTTGAGGTATCTATTT+TGG | 0.258516 | tig0030651:-2456 | None:intergenic |
| CTGTTGGAGTTGTATTGATT+GGG | 0.270020 | tig0030651:-1788 | None:intergenic |
| CAAGTACCAAAGAATTATTT+TGG | 0.272654 | tig0030651:+2718 | Msa1444040:CDS |
| CAATTACCAAAATAATTCTT+TGG | 0.303160 | tig0030651:-2724 | None:intergenic |
| GTTGTTGCAGCTAAGGAAAT+TGG | 0.306362 | tig0030651:+2805 | Msa1444040:CDS |
| TAGTCCATTCTTGAAGAAAA+AGG | 0.324562 | tig0030651:-3103 | None:intergenic |
| AAGGAATGTCAAAGAATGTT+AGG | 0.328639 | tig0030651:-1824 | None:intergenic |
| AGCTTTGCCTAAGAGTAAAA+TGG | 0.340606 | tig0030651:+3071 | Msa1444040:CDS |
| CAACATTACTTCCCATTTGC+CGG | 0.346226 | tig0030651:+1960 | Msa1444040:CDS |
| TAACATTCTTTGACATTCCT+TGG | 0.348877 | tig0030651:+1826 | Msa1444040:CDS |
| TTTGGTAATTGTGTTGGATT+TGG | 0.354815 | tig0030651:+2736 | Msa1444040:CDS |
| GGACAATGGTGGTTGTGAAA+TGG | 0.380046 | tig0030651:-1905 | None:intergenic |
| GCTGTTGGAGTTGTATTGAT+TGG | 0.385871 | tig0030651:-1789 | None:intergenic |
| TTGAGGGTGGAATTGAAATA+GGG | 0.399373 | tig0030651:+3046 | Msa1444040:CDS |
| GACAATGGTGGTTGTGAAAT+GGG | 0.401655 | tig0030651:-1904 | None:intergenic |
| TAACAACTCGGTTTCATTCA+CGG | 0.415497 | tig0030651:+2034 | Msa1444040:CDS |
| CACCATACCTTTCAGATTGA+AGG | 0.417905 | tig0030651:+1740 | Msa1444040:CDS |
| TGTCAATGAATTCCACCCTT+TGG | 0.444833 | tig0030651:+2109 | Msa1444040:CDS |
| AGTAAATTTGAGTTGAGGTT+CGG | 0.452277 | tig0030651:-2009 | None:intergenic |
| TGCTGGTGGTATAACAAGAT+TGG | 0.452467 | tig0030651:+2690 | Msa1444040:CDS |
| GTAATTGTGTTGGATTTGGA+AGG | 0.453539 | tig0030651:+2740 | Msa1444040:CDS |
| TGGTATTGTTGTTGCAGCTA+AGG | 0.457317 | tig0030651:+2798 | Msa1444040:CDS |
| TGTTGGAGTTGTATTGATTG+GGG | 0.464007 | tig0030651:-1787 | None:intergenic |
| GGAATGAAAGTACCGGCAAA+TGG | 0.471982 | tig0030651:-1972 | None:intergenic |
| CAATGGAAAAGCCATAATTT+GGG | 0.474582 | tig0030651:-2205 | None:intergenic |
| TGTACCTCTAGTCATGTTTG+AGG | 0.504128 | tig0030651:-2468 | None:intergenic |
| TTGGATTGGGAAATGTTACA+TGG | 0.508980 | tig0030651:+2883 | Msa1444040:CDS |
| ATCACATTTCGATCATAAAA+GGG | 0.511983 | tig0030651:-2347 | None:intergenic |
| TTTCATCATGTTGTTGCTGA+TGG | 0.516207 | tig0030651:+2236 | Msa1444040:CDS |
| TGTTGCAAGTTTGGTACCAA+AGG | 0.522262 | tig0030651:-2125 | None:intergenic |
| AGGAATGTCAAAGAATGTTA+GGG | 0.522515 | tig0030651:-1823 | None:intergenic |
| AAGTGATGATGAGGCTTCAA+AGG | 0.523397 | tig0030651:-2312 | None:intergenic |
| AAGGACTTACTAGGAGAAGA+TGG | 0.533499 | tig0030651:+2778 | Msa1444040:CDS |
| CAAATTTACTCATAACAACT+CGG | 0.539775 | tig0030651:+2022 | Msa1444040:CDS |
| GTTGCAAGTTTGGTACCAAA+GGG | 0.540271 | tig0030651:-2124 | None:intergenic |
| GAATGAAAGTACCGGCAAAT+GGG | 0.544523 | tig0030651:-1971 | None:intergenic |
| ATTTCGATCATAAAAGGGAA+GGG | 0.547587 | tig0030651:-2342 | None:intergenic |
| GACCTTCAATCTGAAAGGTA+TGG | 0.547940 | tig0030651:-1742 | None:intergenic |
| TTATTTGAATAGCTAACAAA+GGG | 0.551814 | tig0030651:-2175 | None:intergenic |
| CAACAACATGATGAAAAGCT+AGG | 0.557854 | tig0030651:-2229 | None:intergenic |
| GTTATTTGAATAGCTAACAA+AGG | 0.558152 | tig0030651:-2176 | None:intergenic |
| CATTTCGATCATAAAAGGGA+AGG | 0.570301 | tig0030651:-2343 | None:intergenic |
| TTTCTTCAAGAATGGACTAG+AGG | 0.573086 | tig0030651:+3107 | Msa1444040:CDS |
| TTATGAGTAAATTTGAGTTG+AGG | 0.575287 | tig0030651:-2014 | None:intergenic |
| GTTGGAGTTGTATTGATTGG+GGG | 0.576136 | tig0030651:-1786 | None:intergenic |
| AGGAGCATGTTCATGTTACA+TGG | 0.584286 | tig0030651:+2911 | Msa1444040:CDS |
| CTTGGAGAGAAGAGAAGCCA+AGG | 0.588509 | tig0030651:-1843 | None:intergenic |
| TAATTGTGTTGGATTTGGAA+GGG | 0.594172 | tig0030651:+2741 | Msa1444040:CDS |
| AAGCGAGGGAATGAAAGTAC+CGG | 0.597917 | tig0030651:-1979 | None:intergenic |
| TCAATGACCTTCAATCTGAA+AGG | 0.600975 | tig0030651:-1747 | None:intergenic |
| GGGGAGGCCTAAGAAAATAG+AGG | 0.601441 | tig0030651:+2972 | Msa1444040:CDS |
| ATGATGAAAAGCTAGGCCAA+TGG | 0.606709 | tig0030651:-2222 | None:intergenic |
| CTTCAATCTGAAAGGTATGG+TGG | 0.609193 | tig0030651:-1739 | None:intergenic |
| TGGATTGGGAAATGTTACAT+GGG | 0.613040 | tig0030651:+2884 | Msa1444040:CDS |
| GGAAATGTTACATGGGTCAG+AGG | 0.621841 | tig0030651:+2891 | Msa1444040:CDS |
| GTGAAATGGGAAATTGAATG+AGG | 0.623753 | tig0030651:-1891 | None:intergenic |
| TCCACAATTTCATCAAAACA+TGG | 0.629307 | tig0030651:+2267 | Msa1444040:CDS |
| GCAAGTTTGGTACCAAAGGG+TGG | 0.630698 | tig0030651:-2121 | None:intergenic |
| AGGTTCGGTTAGATCAAGCG+AGG | 0.653531 | tig0030651:-1994 | None:intergenic |
| GATACCTCAAACATGACTAG+AGG | 0.665059 | tig0030651:+2464 | Msa1444040:CDS |
| GGAATGTCAAAGAATGTTAG+GGG | 0.679940 | tig0030651:-1822 | None:intergenic |
| GGTTCGGTTAGATCAAGCGA+GGG | 0.683598 | tig0030651:-1993 | None:intergenic |
| GAGGCCTAAGAAAATAGAGG+AGG | 0.725028 | tig0030651:+2975 | Msa1444040:CDS |
| GAATGTCAAAGAATGTTAGG+GGG | 0.726207 | tig0030651:-1821 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAGATTGTTTAAGTTTT+GGG | - | tig0030651:1929-1948 | None:intergenic | 20.0% |
| !! | TTATTTGAATAGCTAACAAA+GGG | - | tig0030651:2178-2197 | None:intergenic | 20.0% |
| !! | CTTAATGAGTTTAAATGAAA+TGG | + | tig0030651:2493-2512 | Msa1444040:intron | 20.0% |
| !! | ACATATGAAGATAAATACAA+AGG | - | tig0030651:2572-2591 | None:intergenic | 20.0% |
| !! | TTCATTAACAAATTCTTGTT+GGG | - | tig0030651:2632-2651 | None:intergenic | 20.0% |
| !! | TTTCATTAACAAATTCTTGT+TGG | - | tig0030651:2633-2652 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTAATGAAAAAG+TGG | + | tig0030651:2636-2655 | Msa1444040:intron | 20.0% |
| !! | CAATTACCAAAATAATTCTT+TGG | - | tig0030651:2727-2746 | None:intergenic | 20.0% |
| !!! | AATTATTTTGGTAATTGTGT+TGG | + | tig0030651:2730-2749 | Msa1444040:CDS | 20.0% |
| !!! | AATTCATAGAGTTTCAATTT+TGG | - | tig0030651:2940-2959 | None:intergenic | 20.0% |
| !!! | AAACTCTATGAATTGAATTT+TGG | + | tig0030651:2946-2965 | Msa1444040:CDS | 20.0% |
| !!! | AACTCTATGAATTGAATTTT+GGG | + | tig0030651:2947-2966 | Msa1444040:CDS | 20.0% |
| !!! | AAAATATCCATTTTACTCTT+AGG | - | tig0030651:3081-3100 | None:intergenic | 20.0% |
| !!! | AAAGAGATTGTTTAAGTTTT+GGG | - | tig0030651:1929-1948 | None:intergenic | 20.0% |
| !! | TTATTTGAATAGCTAACAAA+GGG | - | tig0030651:2178-2197 | None:intergenic | 20.0% |
| !! | CTTAATGAGTTTAAATGAAA+TGG | + | tig0030651:2493-2512 | Msa1444040:intron | 20.0% |
| !! | ACATATGAAGATAAATACAA+AGG | - | tig0030651:2572-2591 | None:intergenic | 20.0% |
| !! | TTCATTAACAAATTCTTGTT+GGG | - | tig0030651:2632-2651 | None:intergenic | 20.0% |
| !! | TTTCATTAACAAATTCTTGT+TGG | - | tig0030651:2633-2652 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTAATGAAAAAG+TGG | + | tig0030651:2636-2655 | Msa1444040:intron | 20.0% |
| !! | CAATTACCAAAATAATTCTT+TGG | - | tig0030651:2727-2746 | None:intergenic | 20.0% |
| !!! | AATTATTTTGGTAATTGTGT+TGG | + | tig0030651:2730-2749 | Msa1444040:CDS | 20.0% |
| !!! | AATTCATAGAGTTTCAATTT+TGG | - | tig0030651:2940-2959 | None:intergenic | 20.0% |
| !!! | AAACTCTATGAATTGAATTT+TGG | + | tig0030651:2946-2965 | Msa1444040:CDS | 20.0% |
| !!! | AACTCTATGAATTGAATTTT+GGG | + | tig0030651:2947-2966 | Msa1444040:CDS | 20.0% |
| !!! | AAAATATCCATTTTACTCTT+AGG | - | tig0030651:3081-3100 | None:intergenic | 20.0% |
| ! | ATTCATAGAAAAATAGTGGT+TGG | - | tig0030651:1869-1888 | None:intergenic | 25.0% |
| ! | GGAAATTCATAGAAAAATAG+TGG | - | tig0030651:1873-1892 | None:intergenic | 25.0% |
| !!! | GAAAGAGATTGTTTAAGTTT+TGG | - | tig0030651:1930-1949 | None:intergenic | 25.0% |
| !!! | TTATGAGTAAATTTGAGTTG+AGG | - | tig0030651:2017-2036 | None:intergenic | 25.0% |
| ! | CAAATTTACTCATAACAACT+CGG | + | tig0030651:2022-2041 | Msa1444040:CDS | 25.0% |
| ! | GTTATTTGAATAGCTAACAA+AGG | - | tig0030651:2179-2198 | None:intergenic | 25.0% |
| ! | ATAACATCATTCCCAAATTA+TGG | + | tig0030651:2194-2213 | Msa1444040:CDS | 25.0% |
| ! | ATCACATTTCGATCATAAAA+GGG | - | tig0030651:2350-2369 | None:intergenic | 25.0% |
| ! | AATCACATTTCGATCATAAA+AGG | - | tig0030651:2351-2370 | None:intergenic | 25.0% |
| !!! | TGTTAACTAGTGCTTTTTAT+GGG | + | tig0030651:2591-2610 | Msa1444040:intron | 25.0% |
| !! | CAAGTACCAAAGAATTATTT+TGG | + | tig0030651:2718-2737 | Msa1444040:CDS | 25.0% |
| !!! | GTTTCAATTGATTTTACAAG+AGG | + | tig0030651:2997-3016 | Msa1444040:CDS | 25.0% |
| ! | ATTCATAGAAAAATAGTGGT+TGG | - | tig0030651:1869-1888 | None:intergenic | 25.0% |
| ! | GGAAATTCATAGAAAAATAG+TGG | - | tig0030651:1873-1892 | None:intergenic | 25.0% |
| !!! | GAAAGAGATTGTTTAAGTTT+TGG | - | tig0030651:1930-1949 | None:intergenic | 25.0% |
| !!! | TTATGAGTAAATTTGAGTTG+AGG | - | tig0030651:2017-2036 | None:intergenic | 25.0% |
| ! | CAAATTTACTCATAACAACT+CGG | + | tig0030651:2022-2041 | Msa1444040:CDS | 25.0% |
| ! | GTTATTTGAATAGCTAACAA+AGG | - | tig0030651:2179-2198 | None:intergenic | 25.0% |
| ! | ATAACATCATTCCCAAATTA+TGG | + | tig0030651:2194-2213 | Msa1444040:CDS | 25.0% |
| ! | ATCACATTTCGATCATAAAA+GGG | - | tig0030651:2350-2369 | None:intergenic | 25.0% |
| ! | AATCACATTTCGATCATAAA+AGG | - | tig0030651:2351-2370 | None:intergenic | 25.0% |
| !!! | TGTTAACTAGTGCTTTTTAT+GGG | + | tig0030651:2591-2610 | Msa1444040:intron | 25.0% |
| !! | CAAGTACCAAAGAATTATTT+TGG | + | tig0030651:2718-2737 | Msa1444040:CDS | 25.0% |
| !!! | GTTTCAATTGATTTTACAAG+AGG | + | tig0030651:2997-3016 | Msa1444040:CDS | 25.0% |
| AGGAATGTCAAAGAATGTTA+GGG | - | tig0030651:1826-1845 | None:intergenic | 30.0% | |
| AAGGAATGTCAAAGAATGTT+AGG | - | tig0030651:1827-1846 | None:intergenic | 30.0% | |
| TAACATTCTTTGACATTCCT+TGG | + | tig0030651:1826-1845 | Msa1444040:CDS | 30.0% | |
| !!! | TTGTTTAAGTTTTGGGACAA+TGG | - | tig0030651:1922-1941 | None:intergenic | 30.0% |
| !! | AGTAAATTTGAGTTGAGGTT+CGG | - | tig0030651:2012-2031 | None:intergenic | 30.0% |
| ATTGACATCTCTTGAGTAAT+TGG | - | tig0030651:2096-2115 | None:intergenic | 30.0% | |
| !! | GAAAAGATTTGTTGCAAGTT+TGG | - | tig0030651:2137-2156 | None:intergenic | 30.0% |
| ! | CTTGCAACAAATCTTTTCAT+TGG | + | tig0030651:2139-2158 | Msa1444040:CDS | 30.0% |
| CAATGGAAAAGCCATAATTT+GGG | - | tig0030651:2208-2227 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATGAAATTGTGGA+AGG | - | tig0030651:2267-2286 | None:intergenic | 30.0% |
| TCCACAATTTCATCAAAACA+TGG | + | tig0030651:2267-2286 | Msa1444040:CDS | 30.0% | |
| !!! | ACCATGTTTTGATGAAATTG+TGG | - | tig0030651:2271-2290 | None:intergenic | 30.0% |
| !! | GGTTTTTATAAGTGATGATG+AGG | - | tig0030651:2324-2343 | None:intergenic | 30.0% |
| ATTTCGATCATAAAAGGGAA+GGG | - | tig0030651:2345-2364 | None:intergenic | 30.0% | |
| !! | TTTTCAAGAAAACTTCGTGA+AGG | - | tig0030651:2388-2407 | None:intergenic | 30.0% |
| !! | CATGTTTGAGGTATCTATTT+TGG | - | tig0030651:2459-2478 | None:intergenic | 30.0% |
| !! | GTGTTAACTAGTGCTTTTTA+TGG | + | tig0030651:2590-2609 | Msa1444040:intron | 30.0% |
| ! | TGTGAAGATGTTACACATTT+TGG | + | tig0030651:2661-2680 | Msa1444040:CDS | 30.0% |
| ! | TTTGGTAATTGTGTTGGATT+TGG | + | tig0030651:2736-2755 | Msa1444040:CDS | 30.0% |
| TAATTGTGTTGGATTTGGAA+GGG | + | tig0030651:2741-2760 | Msa1444040:CDS | 30.0% | |
| TTGACAAAAAAGGACTTACT+AGG | + | tig0030651:2769-2788 | Msa1444040:CDS | 30.0% | |
| ! | AAACTCGATGCATCAATTTT+TGG | + | tig0030651:2841-2860 | Msa1444040:CDS | 30.0% |
| !! | TAAGAAGTGGATTTTGGATT+GGG | + | tig0030651:2870-2889 | Msa1444040:CDS | 30.0% |
| ! | TCTATGAATTGAATTTTGGG+TGG | + | tig0030651:2950-2969 | Msa1444040:CDS | 30.0% |
| !! | CTATGAATTGAATTTTGGGT+GGG | + | tig0030651:2951-2970 | Msa1444040:CDS | 30.0% |
| !! | TATGAATTGAATTTTGGGTG+GGG | + | tig0030651:2952-2971 | Msa1444040:CDS | 30.0% |
| ! | TTCACCTTTTTCTTCAAGAA+TGG | + | tig0030651:3099-3118 | Msa1444040:CDS | 30.0% |
| TAGTCCATTCTTGAAGAAAA+AGG | - | tig0030651:3106-3125 | None:intergenic | 30.0% | |
| AGGAATGTCAAAGAATGTTA+GGG | - | tig0030651:1826-1845 | None:intergenic | 30.0% | |
| AAGGAATGTCAAAGAATGTT+AGG | - | tig0030651:1827-1846 | None:intergenic | 30.0% | |
| TAACATTCTTTGACATTCCT+TGG | + | tig0030651:1826-1845 | Msa1444040:CDS | 30.0% | |
| !!! | TTGTTTAAGTTTTGGGACAA+TGG | - | tig0030651:1922-1941 | None:intergenic | 30.0% |
| !! | AGTAAATTTGAGTTGAGGTT+CGG | - | tig0030651:2012-2031 | None:intergenic | 30.0% |
| ATTGACATCTCTTGAGTAAT+TGG | - | tig0030651:2096-2115 | None:intergenic | 30.0% | |
| !! | GAAAAGATTTGTTGCAAGTT+TGG | - | tig0030651:2137-2156 | None:intergenic | 30.0% |
| ! | CTTGCAACAAATCTTTTCAT+TGG | + | tig0030651:2139-2158 | Msa1444040:CDS | 30.0% |
| CAATGGAAAAGCCATAATTT+GGG | - | tig0030651:2208-2227 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATGAAATTGTGGA+AGG | - | tig0030651:2267-2286 | None:intergenic | 30.0% |
| TCCACAATTTCATCAAAACA+TGG | + | tig0030651:2267-2286 | Msa1444040:CDS | 30.0% | |
| !!! | ACCATGTTTTGATGAAATTG+TGG | - | tig0030651:2271-2290 | None:intergenic | 30.0% |
| !! | GGTTTTTATAAGTGATGATG+AGG | - | tig0030651:2324-2343 | None:intergenic | 30.0% |
| ATTTCGATCATAAAAGGGAA+GGG | - | tig0030651:2345-2364 | None:intergenic | 30.0% | |
| !! | TTTTCAAGAAAACTTCGTGA+AGG | - | tig0030651:2388-2407 | None:intergenic | 30.0% |
| !! | CATGTTTGAGGTATCTATTT+TGG | - | tig0030651:2459-2478 | None:intergenic | 30.0% |
| !! | GTGTTAACTAGTGCTTTTTA+TGG | + | tig0030651:2590-2609 | Msa1444040:intron | 30.0% |
| ! | TGTGAAGATGTTACACATTT+TGG | + | tig0030651:2661-2680 | Msa1444040:CDS | 30.0% |
| ! | TTTGGTAATTGTGTTGGATT+TGG | + | tig0030651:2736-2755 | Msa1444040:CDS | 30.0% |
| TAATTGTGTTGGATTTGGAA+GGG | + | tig0030651:2741-2760 | Msa1444040:CDS | 30.0% | |
| TTGACAAAAAAGGACTTACT+AGG | + | tig0030651:2769-2788 | Msa1444040:CDS | 30.0% | |
| ! | AAACTCGATGCATCAATTTT+TGG | + | tig0030651:2841-2860 | Msa1444040:CDS | 30.0% |
| !! | TAAGAAGTGGATTTTGGATT+GGG | + | tig0030651:2870-2889 | Msa1444040:CDS | 30.0% |
| ! | TCTATGAATTGAATTTTGGG+TGG | + | tig0030651:2950-2969 | Msa1444040:CDS | 30.0% |
| !! | CTATGAATTGAATTTTGGGT+GGG | + | tig0030651:2951-2970 | Msa1444040:CDS | 30.0% |
| !! | TATGAATTGAATTTTGGGTG+GGG | + | tig0030651:2952-2971 | Msa1444040:CDS | 30.0% |
| ! | TTCACCTTTTTCTTCAAGAA+TGG | + | tig0030651:3099-3118 | Msa1444040:CDS | 30.0% |
| TAGTCCATTCTTGAAGAAAA+AGG | - | tig0030651:3106-3125 | None:intergenic | 30.0% | |
| TCAATGACCTTCAATCTGAA+AGG | - | tig0030651:1750-1769 | None:intergenic | 35.0% | |
| !! | TGTTGGAGTTGTATTGATTG+GGG | - | tig0030651:1790-1809 | None:intergenic | 35.0% |
| !! | CTGTTGGAGTTGTATTGATT+GGG | - | tig0030651:1791-1810 | None:intergenic | 35.0% |
| GAATGTCAAAGAATGTTAGG+GGG | - | tig0030651:1824-1843 | None:intergenic | 35.0% | |
| GGAATGTCAAAGAATGTTAG+GGG | - | tig0030651:1825-1844 | None:intergenic | 35.0% | |
| ! | TAGAAAAATAGTGGTTGGCT+TGG | - | tig0030651:1864-1883 | None:intergenic | 35.0% |
| GTGAAATGGGAAATTGAATG+AGG | - | tig0030651:1894-1913 | None:intergenic | 35.0% | |
| !!! | TTTAAGTTTTGGGACAATGG+TGG | - | tig0030651:1919-1938 | None:intergenic | 35.0% |
| TAACAACTCGGTTTCATTCA+CGG | + | tig0030651:2034-2053 | Msa1444040:CDS | 35.0% | |
| CCAATGGAAAAGCCATAATT+TGG | - | tig0030651:2209-2228 | None:intergenic | 35.0% | |
| ! | CCAAATTATGGCTTTTCCAT+TGG | + | tig0030651:2206-2225 | Msa1444040:CDS | 35.0% |
| CAACAACATGATGAAAAGCT+AGG | - | tig0030651:2232-2251 | None:intergenic | 35.0% | |
| TTTCATCATGTTGTTGCTGA+TGG | + | tig0030651:2236-2255 | Msa1444040:CDS | 35.0% | |
| CATTTCGATCATAAAAGGGA+AGG | - | tig0030651:2346-2365 | None:intergenic | 35.0% | |
| ! | ACACATTTTGGATTCATTGC+TGG | + | tig0030651:2673-2692 | Msa1444040:CDS | 35.0% |
| GTAATTGTGTTGGATTTGGA+AGG | + | tig0030651:2740-2759 | Msa1444040:CDS | 35.0% | |
| !! | AAGGGTGTCATTGACAAAAA+AGG | + | tig0030651:2759-2778 | Msa1444040:CDS | 35.0% |
| !! | GATGCATCAATTTTTGGAGA+GGG | + | tig0030651:2847-2866 | Msa1444040:CDS | 35.0% |
| !! | GTAAGAAGTGGATTTTGGAT+TGG | + | tig0030651:2869-2888 | Msa1444040:CDS | 35.0% |
| ! | TTGGATTGGGAAATGTTACA+TGG | + | tig0030651:2883-2902 | Msa1444040:CDS | 35.0% |
| ! | TGGATTGGGAAATGTTACAT+GGG | + | tig0030651:2884-2903 | Msa1444040:CDS | 35.0% |
| !! | ATGAATTGAATTTTGGGTGG+GGG | + | tig0030651:2953-2972 | Msa1444040:CDS | 35.0% |
| ! | GAAACCTCCTCTATTTTCTT+AGG | - | tig0030651:2982-3001 | None:intergenic | 35.0% |
| ! | TGTTGAGAGTAGAGATTTTG+AGG | + | tig0030651:3029-3048 | Msa1444040:CDS | 35.0% |
| ! | GTTGAGAGTAGAGATTTTGA+GGG | + | tig0030651:3030-3049 | Msa1444040:CDS | 35.0% |
| TTTGAGGGTGGAATTGAAAT+AGG | + | tig0030651:3045-3064 | Msa1444040:CDS | 35.0% | |
| TTGAGGGTGGAATTGAAATA+GGG | + | tig0030651:3046-3065 | Msa1444040:CDS | 35.0% | |
| AGCTTTGCCTAAGAGTAAAA+TGG | + | tig0030651:3071-3090 | Msa1444040:CDS | 35.0% | |
| !! | TTTCTTCAAGAATGGACTAG+AGG | + | tig0030651:3107-3126 | Msa1444040:CDS | 35.0% |
| TCAATGACCTTCAATCTGAA+AGG | - | tig0030651:1750-1769 | None:intergenic | 35.0% | |
| !! | TGTTGGAGTTGTATTGATTG+GGG | - | tig0030651:1790-1809 | None:intergenic | 35.0% |
| !! | CTGTTGGAGTTGTATTGATT+GGG | - | tig0030651:1791-1810 | None:intergenic | 35.0% |
| GAATGTCAAAGAATGTTAGG+GGG | - | tig0030651:1824-1843 | None:intergenic | 35.0% | |
| GGAATGTCAAAGAATGTTAG+GGG | - | tig0030651:1825-1844 | None:intergenic | 35.0% | |
| ! | TAGAAAAATAGTGGTTGGCT+TGG | - | tig0030651:1864-1883 | None:intergenic | 35.0% |
| GTGAAATGGGAAATTGAATG+AGG | - | tig0030651:1894-1913 | None:intergenic | 35.0% | |
| !!! | TTTAAGTTTTGGGACAATGG+TGG | - | tig0030651:1919-1938 | None:intergenic | 35.0% |
| TAACAACTCGGTTTCATTCA+CGG | + | tig0030651:2034-2053 | Msa1444040:CDS | 35.0% | |
| CCAATGGAAAAGCCATAATT+TGG | - | tig0030651:2209-2228 | None:intergenic | 35.0% | |
| ! | CCAAATTATGGCTTTTCCAT+TGG | + | tig0030651:2206-2225 | Msa1444040:CDS | 35.0% |
| CAACAACATGATGAAAAGCT+AGG | - | tig0030651:2232-2251 | None:intergenic | 35.0% | |
| TTTCATCATGTTGTTGCTGA+TGG | + | tig0030651:2236-2255 | Msa1444040:CDS | 35.0% | |
| CATTTCGATCATAAAAGGGA+AGG | - | tig0030651:2346-2365 | None:intergenic | 35.0% | |
| ! | ACACATTTTGGATTCATTGC+TGG | + | tig0030651:2673-2692 | Msa1444040:CDS | 35.0% |
| GTAATTGTGTTGGATTTGGA+AGG | + | tig0030651:2740-2759 | Msa1444040:CDS | 35.0% | |
| !! | AAGGGTGTCATTGACAAAAA+AGG | + | tig0030651:2759-2778 | Msa1444040:CDS | 35.0% |
| !! | GATGCATCAATTTTTGGAGA+GGG | + | tig0030651:2847-2866 | Msa1444040:CDS | 35.0% |
| !! | GTAAGAAGTGGATTTTGGAT+TGG | + | tig0030651:2869-2888 | Msa1444040:CDS | 35.0% |
| ! | TTGGATTGGGAAATGTTACA+TGG | + | tig0030651:2883-2902 | Msa1444040:CDS | 35.0% |
| ! | TGGATTGGGAAATGTTACAT+GGG | + | tig0030651:2884-2903 | Msa1444040:CDS | 35.0% |
| !! | ATGAATTGAATTTTGGGTGG+GGG | + | tig0030651:2953-2972 | Msa1444040:CDS | 35.0% |
| ! | GAAACCTCCTCTATTTTCTT+AGG | - | tig0030651:2982-3001 | None:intergenic | 35.0% |
| ! | TGTTGAGAGTAGAGATTTTG+AGG | + | tig0030651:3029-3048 | Msa1444040:CDS | 35.0% |
| ! | GTTGAGAGTAGAGATTTTGA+GGG | + | tig0030651:3030-3049 | Msa1444040:CDS | 35.0% |
| TTTGAGGGTGGAATTGAAAT+AGG | + | tig0030651:3045-3064 | Msa1444040:CDS | 35.0% | |
| TTGAGGGTGGAATTGAAATA+GGG | + | tig0030651:3046-3065 | Msa1444040:CDS | 35.0% | |
| AGCTTTGCCTAAGAGTAAAA+TGG | + | tig0030651:3071-3090 | Msa1444040:CDS | 35.0% | |
| !! | TTTCTTCAAGAATGGACTAG+AGG | + | tig0030651:3107-3126 | Msa1444040:CDS | 35.0% |
| ! | CTTCAATCTGAAAGGTATGG+TGG | - | tig0030651:1742-1761 | None:intergenic | 40.0% |
| CACCATACCTTTCAGATTGA+AGG | + | tig0030651:1740-1759 | Msa1444040:CDS | 40.0% | |
| GACCTTCAATCTGAAAGGTA+TGG | - | tig0030651:1745-1764 | None:intergenic | 40.0% | |
| !! | GTTGGAGTTGTATTGATTGG+GGG | - | tig0030651:1789-1808 | None:intergenic | 40.0% |
| ! | GCTGTTGGAGTTGTATTGAT+TGG | - | tig0030651:1792-1811 | None:intergenic | 40.0% |
| GACAATGGTGGTTGTGAAAT+GGG | - | tig0030651:1907-1926 | None:intergenic | 40.0% | |
| CAACATTACTTCCCATTTGC+CGG | + | tig0030651:1960-1979 | Msa1444040:CDS | 40.0% | |
| !! | GAATGAAAGTACCGGCAAAT+GGG | - | tig0030651:1974-1993 | None:intergenic | 40.0% |
| TGTCAATGAATTCCACCCTT+TGG | + | tig0030651:2109-2128 | Msa1444040:CDS | 40.0% | |
| GTTGCAAGTTTGGTACCAAA+GGG | - | tig0030651:2127-2146 | None:intergenic | 40.0% | |
| TGTTGCAAGTTTGGTACCAA+AGG | - | tig0030651:2128-2147 | None:intergenic | 40.0% | |
| ATGATGAAAAGCTAGGCCAA+TGG | - | tig0030651:2225-2244 | None:intergenic | 40.0% | |
| ! | AAGTGATGATGAGGCTTCAA+AGG | - | tig0030651:2315-2334 | None:intergenic | 40.0% |
| GATACCTCAAACATGACTAG+AGG | + | tig0030651:2464-2483 | Msa1444040:CDS | 40.0% | |
| TGTACCTCTAGTCATGTTTG+AGG | - | tig0030651:2471-2490 | None:intergenic | 40.0% | |
| ! | CATTTTGGATTCATTGCTGG+TGG | + | tig0030651:2676-2695 | Msa1444040:CDS | 40.0% |
| TGCTGGTGGTATAACAAGAT+TGG | + | tig0030651:2690-2709 | Msa1444040:CDS | 40.0% | |
| AAGGACTTACTAGGAGAAGA+TGG | + | tig0030651:2778-2797 | Msa1444040:CDS | 40.0% | |
| ! | TGGTATTGTTGTTGCAGCTA+AGG | + | tig0030651:2798-2817 | Msa1444040:CDS | 40.0% |
| GTTGTTGCAGCTAAGGAAAT+TGG | + | tig0030651:2805-2824 | Msa1444040:CDS | 40.0% | |
| !! | CGATGCATCAATTTTTGGAG+AGG | + | tig0030651:2846-2865 | Msa1444040:CDS | 40.0% |
| !! | TTTTTGGAGAGGGTAAGAAG+TGG | + | tig0030651:2857-2876 | Msa1444040:CDS | 40.0% |
| !! | AGAGGGTAAGAAGTGGATTT+TGG | + | tig0030651:2864-2883 | Msa1444040:CDS | 40.0% |
| ! | AGGAGCATGTTCATGTTACA+TGG | + | tig0030651:2911-2930 | Msa1444040:CDS | 40.0% |
| ! | CTTCAATCTGAAAGGTATGG+TGG | - | tig0030651:1742-1761 | None:intergenic | 40.0% |
| CACCATACCTTTCAGATTGA+AGG | + | tig0030651:1740-1759 | Msa1444040:CDS | 40.0% | |
| GACCTTCAATCTGAAAGGTA+TGG | - | tig0030651:1745-1764 | None:intergenic | 40.0% | |
| !! | GTTGGAGTTGTATTGATTGG+GGG | - | tig0030651:1789-1808 | None:intergenic | 40.0% |
| ! | GCTGTTGGAGTTGTATTGAT+TGG | - | tig0030651:1792-1811 | None:intergenic | 40.0% |
| GACAATGGTGGTTGTGAAAT+GGG | - | tig0030651:1907-1926 | None:intergenic | 40.0% | |
| CAACATTACTTCCCATTTGC+CGG | + | tig0030651:1960-1979 | Msa1444040:CDS | 40.0% | |
| !! | GAATGAAAGTACCGGCAAAT+GGG | - | tig0030651:1974-1993 | None:intergenic | 40.0% |
| TGTCAATGAATTCCACCCTT+TGG | + | tig0030651:2109-2128 | Msa1444040:CDS | 40.0% | |
| GTTGCAAGTTTGGTACCAAA+GGG | - | tig0030651:2127-2146 | None:intergenic | 40.0% | |
| TGTTGCAAGTTTGGTACCAA+AGG | - | tig0030651:2128-2147 | None:intergenic | 40.0% | |
| ATGATGAAAAGCTAGGCCAA+TGG | - | tig0030651:2225-2244 | None:intergenic | 40.0% | |
| ! | AAGTGATGATGAGGCTTCAA+AGG | - | tig0030651:2315-2334 | None:intergenic | 40.0% |
| GATACCTCAAACATGACTAG+AGG | + | tig0030651:2464-2483 | Msa1444040:CDS | 40.0% | |
| TGTACCTCTAGTCATGTTTG+AGG | - | tig0030651:2471-2490 | None:intergenic | 40.0% | |
| ! | CATTTTGGATTCATTGCTGG+TGG | + | tig0030651:2676-2695 | Msa1444040:CDS | 40.0% |
| TGCTGGTGGTATAACAAGAT+TGG | + | tig0030651:2690-2709 | Msa1444040:CDS | 40.0% | |
| AAGGACTTACTAGGAGAAGA+TGG | + | tig0030651:2778-2797 | Msa1444040:CDS | 40.0% | |
| ! | TGGTATTGTTGTTGCAGCTA+AGG | + | tig0030651:2798-2817 | Msa1444040:CDS | 40.0% |
| GTTGTTGCAGCTAAGGAAAT+TGG | + | tig0030651:2805-2824 | Msa1444040:CDS | 40.0% | |
| !! | CGATGCATCAATTTTTGGAG+AGG | + | tig0030651:2846-2865 | Msa1444040:CDS | 40.0% |
| !! | TTTTTGGAGAGGGTAAGAAG+TGG | + | tig0030651:2857-2876 | Msa1444040:CDS | 40.0% |
| !! | AGAGGGTAAGAAGTGGATTT+TGG | + | tig0030651:2864-2883 | Msa1444040:CDS | 40.0% |
| ! | AGGAGCATGTTCATGTTACA+TGG | + | tig0030651:2911-2930 | Msa1444040:CDS | 40.0% |
| GTCAAAGAATGTTAGGGGGA+GGG | - | tig0030651:1820-1839 | None:intergenic | 45.0% | |
| TGTCAAAGAATGTTAGGGGG+AGG | - | tig0030651:1821-1840 | None:intergenic | 45.0% | |
| GGACAATGGTGGTTGTGAAA+TGG | - | tig0030651:1908-1927 | None:intergenic | 45.0% | |
| !! | GGAATGAAAGTACCGGCAAA+TGG | - | tig0030651:1975-1994 | None:intergenic | 45.0% |
| ! | AAGCGAGGGAATGAAAGTAC+CGG | - | tig0030651:1982-2001 | None:intergenic | 45.0% |
| GGAAATGTTACATGGGTCAG+AGG | + | tig0030651:2891-2910 | Msa1444040:CDS | 45.0% | |
| !! | AATTGAATTTTGGGTGGGGG+AGG | + | tig0030651:2956-2975 | Msa1444040:CDS | 45.0% |
| GAGGCCTAAGAAAATAGAGG+AGG | + | tig0030651:2975-2994 | Msa1444040:CDS | 45.0% | |
| !! | GAGAGTAGAGATTTTGAGGG+TGG | + | tig0030651:3033-3052 | Msa1444040:CDS | 45.0% |
| GTCAAAGAATGTTAGGGGGA+GGG | - | tig0030651:1820-1839 | None:intergenic | 45.0% | |
| TGTCAAAGAATGTTAGGGGG+AGG | - | tig0030651:1821-1840 | None:intergenic | 45.0% | |
| GGACAATGGTGGTTGTGAAA+TGG | - | tig0030651:1908-1927 | None:intergenic | 45.0% | |
| !! | GGAATGAAAGTACCGGCAAA+TGG | - | tig0030651:1975-1994 | None:intergenic | 45.0% |
| ! | AAGCGAGGGAATGAAAGTAC+CGG | - | tig0030651:1982-2001 | None:intergenic | 45.0% |
| GGAAATGTTACATGGGTCAG+AGG | + | tig0030651:2891-2910 | Msa1444040:CDS | 45.0% | |
| !! | AATTGAATTTTGGGTGGGGG+AGG | + | tig0030651:2956-2975 | Msa1444040:CDS | 45.0% |
| GAGGCCTAAGAAAATAGAGG+AGG | + | tig0030651:2975-2994 | Msa1444040:CDS | 45.0% | |
| !! | GAGAGTAGAGATTTTGAGGG+TGG | + | tig0030651:3033-3052 | Msa1444040:CDS | 45.0% |
| CTTGGAGAGAAGAGAAGCCA+AGG | - | tig0030651:1846-1865 | None:intergenic | 50.0% | |
| ! | GGTTCGGTTAGATCAAGCGA+GGG | - | tig0030651:1996-2015 | None:intergenic | 50.0% |
| ! | AGGTTCGGTTAGATCAAGCG+AGG | - | tig0030651:1997-2016 | None:intergenic | 50.0% |
| GCAAGTTTGGTACCAAAGGG+TGG | - | tig0030651:2124-2143 | None:intergenic | 50.0% | |
| GGGGAGGCCTAAGAAAATAG+AGG | + | tig0030651:2972-2991 | Msa1444040:CDS | 50.0% | |
| CTTGGAGAGAAGAGAAGCCA+AGG | - | tig0030651:1846-1865 | None:intergenic | 50.0% | |
| ! | GGTTCGGTTAGATCAAGCGA+GGG | - | tig0030651:1996-2015 | None:intergenic | 50.0% |
| ! | AGGTTCGGTTAGATCAAGCG+AGG | - | tig0030651:1997-2016 | None:intergenic | 50.0% |
| GCAAGTTTGGTACCAAAGGG+TGG | - | tig0030651:2124-2143 | None:intergenic | 50.0% | |
| GGGGAGGCCTAAGAAAATAG+AGG | + | tig0030651:2972-2991 | Msa1444040:CDS | 50.0% | |
| GAATGTTAGGGGGAGGGAAG+AGG | - | tig0030651:1814-1833 | None:intergenic | 55.0% | |
| GAATGTTAGGGGGAGGGAAG+AGG | - | tig0030651:1814-1833 | None:intergenic | 55.0% | |
| AGGGGGAGGGAAGAGGCTGT+TGG | - | tig0030651:1807-1826 | None:intergenic | 65.0% | |
| AGGGGGAGGGAAGAGGCTGT+TGG | - | tig0030651:1807-1826 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030651 | gene | 1735 | 3140 | 1735 | ID=Msa1444040;Name=Msa1444040 |
| tig0030651 | mRNA | 1735 | 3140 | 1735 | ID=Msa1444040-mRNA-1;Parent=Msa1444040;Name=Msa1444040-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|411 |
| tig0030651 | exon | 1735 | 2485 | 1735 | ID=Msa1444040-mRNA-1:exon:14291;Parent=Msa1444040-mRNA-1 |
| tig0030651 | exon | 2656 | 3140 | 2656 | ID=Msa1444040-mRNA-1:exon:14292;Parent=Msa1444040-mRNA-1 |
| tig0030651 | CDS | 1735 | 2485 | 1735 | ID=Msa1444040-mRNA-1:cds;Parent=Msa1444040-mRNA-1 |
| tig0030651 | CDS | 2656 | 3140 | 2656 | ID=Msa1444040-mRNA-1:cds;Parent=Msa1444040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
