AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1444600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444600 MtrunA17_Chr2g0282761 94.721 341 13 2 1 336 1 341 0.0 664
Msa1444600 MtrunA17_Chr2g0282741 68.047 338 92 7 1 331 1 329 8.44e-148 419
Msa1444600 MtrunA17_Chr4g0040501 64.706 340 111 6 1 334 1 337 7.11e-142 405
Msa1444600 MtrunA17_Chr4g0006391 60.767 339 121 5 1 334 1 332 7.26e-134 384
Msa1444600 MtrunA17_Chr2g0324921 58.601 343 118 6 1 334 1 328 7.74e-130 374
Msa1444600 MtrunA17_Chr3g0138471 50.602 332 147 6 1 331 1 316 3.61e-104 308
Msa1444600 MtrunA17_Chr3g0093111 39.884 346 152 8 3 334 1 304 6.12e-74 231
Msa1444600 MtrunA17_Chr5g0415751 50.758 132 62 1 200 331 23 151 7.41e-44 148
Msa1444600 MtrunA17_Chr8g0334811 31.897 348 197 11 5 327 15 347 2.10e-38 141
Msa1444600 MtrunA17_Chr2g0277721 44.000 175 93 3 159 331 79 250 4.31e-38 136
Msa1444600 MtrunA17_Chr3g0124801 42.353 170 93 4 159 326 111 277 1.67e-36 133
Msa1444600 MtrunA17_Chr7g0269841 30.267 337 204 9 5 335 27 338 7.39e-34 127
Msa1444600 MtrunA17_Chr3g0123861 26.197 355 216 13 4 331 82 417 1.77e-21 94.7
Msa1444600 MtrunA17_Chr6g0478651 41.772 158 67 7 2 153 66 204 5.34e-21 93.6
Msa1444600 MtrunA17_Chr3g0091351 40.404 99 56 1 223 321 2 97 6.68e-21 86.3
Msa1444600 MtrunA17_Chr2g0322181 27.962 211 127 5 120 328 159 346 7.58e-20 89.7
Msa1444600 MtrunA17_Chr2g0322181 60.563 71 23 1 5 75 14 79 2.06e-12 67.8
Msa1444600 MtrunA17_Chr7g0263971 58.824 68 28 0 4 71 369 436 9.84e-20 89.7
Msa1444600 MtrunA17_Chr4g0025401 29.577 213 121 6 120 328 157 344 1.10e-19 89.4
Msa1444600 MtrunA17_Chr4g0025401 59.155 71 24 1 5 75 14 79 3.75e-11 63.9
Msa1444600 MtrunA17_Chr5g0415731 55.556 72 25 1 4 68 5 76 1.60e-18 80.9
Msa1444600 MtrunA17_Chr3g0091361 50.685 73 36 0 3 75 4 76 2.45e-17 79.3
Msa1444600 MtrunA17_Chr2g0333221 53.012 83 35 2 4 86 70 148 5.96e-17 81.6
Msa1444600 MtrunA17_Chr5g0427221 56.250 64 27 1 4 67 48 110 2.23e-16 75.1
Msa1444600 MtrunA17_Chr4g0021141 53.125 64 29 1 4 67 22 84 4.04e-16 73.9
Msa1444600 MtrunA17_Chr1g0159491 45.946 74 39 1 3 76 5 77 6.55e-16 72.0
Msa1444600 MtrunA17_Chr7g0271891 48.485 66 31 1 5 67 17 82 1.35e-15 73.6
Msa1444600 MtrunA17_Chr8g0344721 47.826 69 31 1 4 67 10 78 2.95e-15 74.3
Msa1444600 MtrunA17_Chr4g0044331 51.667 60 26 1 11 67 19 78 2.59e-14 69.7
Msa1444600 MtrunA17_Chr3g0087741 49.315 73 36 1 4 76 89 160 5.75e-14 72.4
Msa1444600 MtrunA17_Chr5g0399201 44.156 77 41 1 4 78 12 88 5.86e-14 72.8
Msa1444600 MtrunA17_Chr5g0426951 40.000 115 53 4 4 112 83 187 6.53e-14 72.4
Msa1444600 MtrunA17_Chr1g0209551 53.125 64 29 1 4 67 16 78 6.71e-14 72.0
Msa1444600 MtrunA17_Chr6g0460461 44.928 69 34 1 3 67 1 69 1.79e-13 68.9
Msa1444600 MtrunA17_Chr3g0132971 49.254 67 31 2 3 68 68 132 2.25e-13 68.6
Msa1444600 MtrunA17_Chr6g0460411 44.928 69 34 1 3 67 1 69 3.29e-13 68.2
Msa1444600 MtrunA17_Chr4g0010781 46.053 76 40 1 1 76 83 157 7.63e-13 68.9
Msa1444600 MtrunA17_Chr5g0414471 53.125 64 29 1 4 67 25 87 1.01e-12 68.6
Msa1444600 MtrunA17_Chr1g0159511 45.946 74 39 1 4 77 6 78 1.57e-12 67.8
Msa1444600 MtrunA17_Chr7g0242951 49.254 67 32 1 3 69 26 90 1.59e-12 68.2
Msa1444600 MtrunA17_Chr1g0173931 41.573 89 45 3 6 91 40 124 4.53e-12 65.9
Msa1444600 MtrunA17_Chr6g0460381 42.029 69 36 1 3 67 2 70 1.01e-11 63.5
Msa1444600 MtrunA17_Chr7g0258061 28.889 180 110 7 6 172 24 198 1.64e-11 63.9
Msa1444600 MtrunA17_Chr2g0295821 36.290 124 64 4 4 120 104 219 1.96e-11 64.3
Msa1444600 MtrunA17_Chr6g0476751 49.231 65 31 1 3 67 65 127 2.34e-11 65.1
Msa1444600 MtrunA17_Chr5g0393371 41.892 74 42 1 4 77 6 78 4.13e-11 63.5
Msa1444600 MtrunA17_Chr2g0295361 49.231 65 31 1 3 67 38 100 4.95e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444600 AT2G20560.1 62.798 336 117 6 1 334 1 330 3.13e-138 395
Msa1444600 AT3G08910.1 61.194 335 108 7 1 334 1 314 3.09e-133 382
Msa1444600 AT4G28480.1 62.500 344 116 7 1 334 1 341 1.32e-129 374
Msa1444600 AT5G01390.1 59.118 340 120 7 1 334 1 327 2.17e-129 373
Msa1444600 AT5G25530.2 53.198 344 138 8 1 334 1 331 1.19e-115 338
Msa1444600 AT5G25530.1 51.989 352 138 9 1 334 1 339 1.68e-112 330
Msa1444600 AT5G01390.2 52.395 334 94 5 1 334 1 269 1.75e-103 305
Msa1444600 AT1G10350.1 49.853 341 157 7 1 331 1 337 1.37e-102 305
Msa1444600 AT1G59725.1 50.147 339 147 6 1 334 1 322 4.72e-99 296
Msa1444600 AT3G47940.1 49.573 351 143 10 1 331 1 337 9.92e-98 293
Msa1444600 AT5G01390.3 44.611 334 81 5 1 334 1 230 7.57e-77 236
Msa1444600 AT2G20550.1 50.000 278 93 5 100 334 3 277 3.53e-74 231
Msa1444600 AT2G20550.2 50.000 278 93 5 100 334 3 277 3.53e-74 231
Msa1444600 AT5G01390.4 55.838 197 68 5 1 190 1 185 1.13e-63 202
Msa1444600 AT4G28480.2 66.176 136 43 2 199 334 151 283 3.15e-54 179
Msa1444600 AT4G28480.2 70.796 113 30 2 1 110 1 113 4.67e-48 164
Msa1444600 AT3G44110.1 32.070 343 203 9 5 328 15 346 4.05e-34 130
Msa1444600 AT5G22060.1 31.319 364 179 10 5 328 15 347 6.78e-34 129
Msa1444600 AT1G44160.1 40.437 183 105 3 154 335 169 348 1.13e-33 127
Msa1444600 AT1G11040.1 38.624 189 107 4 147 334 246 426 4.56e-33 127
Msa1444600 AT3G62600.1 29.940 334 203 9 2 328 24 333 5.64e-31 120
Msa1444600 AT3G44110.2 31.707 328 194 9 5 313 15 331 2.68e-29 115
Msa1444600 AT2G22360.1 26.571 350 220 12 4 331 86 420 1.49e-19 89.4
Msa1444600 AT4G39960.1 52.326 86 38 2 4 88 85 168 6.40e-19 87.8
Msa1444600 AT4G39960.2 52.326 86 38 2 4 88 85 168 6.40e-19 87.8
Msa1444600 AT1G80030.4 52.941 85 35 2 4 88 75 154 2.21e-18 86.3
Msa1444600 AT1G80030.2 52.941 85 35 2 4 88 75 154 2.56e-18 86.3
Msa1444600 AT1G80030.3 52.941 85 35 2 4 88 75 154 2.56e-18 86.3
Msa1444600 AT1G80030.1 52.941 85 35 2 4 88 75 154 2.56e-18 86.3
Msa1444600 AT2G41000.2 43.333 90 45 2 3 88 2 89 6.44e-17 78.6
Msa1444600 AT3G17830.1 50.000 86 37 2 2 85 61 142 6.81e-17 82.0
Msa1444600 AT2G41000.1 43.333 90 45 2 3 88 2 89 1.61e-16 77.0
Msa1444600 AT5G03160.1 51.471 68 33 0 4 71 370 437 6.60e-16 79.0
Msa1444600 AT1G59980.2 54.839 62 27 1 6 67 25 85 1.60e-15 77.0
Msa1444600 AT5G48030.1 56.923 65 27 1 4 68 94 157 1.65e-15 77.4
Msa1444600 AT1G59980.1 54.839 62 27 1 6 67 25 85 2.90e-15 76.6
Msa1444600 AT1G56300.2 50.000 66 30 1 5 67 14 79 5.48e-15 70.9
Msa1444600 AT5G16650.2 56.250 64 27 1 4 67 11 73 5.49e-15 72.4
Msa1444600 AT1G56300.1 50.000 66 30 1 5 67 14 79 5.64e-15 72.0
Msa1444600 AT5G16650.1 56.250 64 27 1 4 67 11 73 6.07e-15 71.2
Msa1444600 AT1G68370.1 56.250 64 27 1 4 67 17 79 1.02e-14 75.1
Msa1444600 AT2G21510.3 54.545 66 29 1 4 69 6 70 1.38e-13 71.2
Msa1444600 AT2G21510.1 54.545 66 29 1 4 69 6 70 1.38e-13 71.2
Msa1444600 AT2G21510.2 54.545 66 29 1 4 69 6 70 1.47e-13 71.2
Msa1444600 AT2G21510.4 54.545 66 29 1 4 69 6 70 1.47e-13 71.2
Msa1444600 AT2G33735.1 46.154 65 34 1 4 68 22 85 1.52e-13 67.0
Msa1444600 AT2G33735.2 46.154 65 34 1 4 68 22 85 1.52e-13 67.0
Msa1444600 AT2G21510.5 54.545 66 29 1 4 69 6 70 2.04e-13 70.5
Msa1444600 AT5G06910.1 50.794 63 30 1 6 68 31 92 5.07e-13 68.9
Msa1444600 AT1G71000.2 46.970 66 32 1 5 67 9 74 1.67e-12 65.1
Msa1444600 AT4G13830.1 43.284 67 37 1 3 68 65 131 2.65e-12 64.3
Msa1444600 AT4G13830.3 43.284 67 37 1 3 68 65 131 3.71e-12 64.7
Msa1444600 AT1G71000.1 46.970 66 32 1 5 67 9 74 4.31e-12 63.9
Msa1444600 AT2G35720.1 47.059 68 34 1 4 69 15 82 4.82e-12 67.4
Msa1444600 AT1G24120.1 50.000 64 31 1 4 67 20 82 5.21e-12 67.0
Msa1444600 AT4G13830.2 43.284 67 37 1 3 68 65 131 1.45e-11 63.2
Msa1444600 AT4G19570.1 50.000 70 33 1 4 73 66 133 1.53e-11 65.9
Msa1444600 AT3G12170.1 47.619 63 32 1 6 68 13 74 1.53e-11 64.3
Msa1444600 AT4G39150.3 48.485 66 33 1 4 69 6 70 1.85e-11 64.7
Msa1444600 AT4G39150.1 48.485 66 33 1 4 69 6 70 1.85e-11 64.7
Msa1444600 AT4G39150.2 48.485 66 33 1 4 69 6 70 1.85e-11 64.7
Msa1444600 AT3G12170.2 47.619 63 32 1 6 68 49 110 2.42e-11 63.9
Msa1444600 AT3G08970.1 47.761 67 33 1 3 69 26 90 2.76e-11 65.1
Msa1444600 AT3G08970.2 47.761 67 33 1 3 69 26 90 2.76e-11 65.1
Msa1444600 AT5G37750.1 44.048 84 43 2 4 85 70 151 4.11e-11 62.8
Msa1444600 AT3G06340.2 36.697 109 64 2 3 111 66 169 4.91e-11 64.3
Msa1444600 AT3G06340.4 36.697 109 64 2 3 111 66 169 4.91e-11 64.3
Msa1444600 AT3G06340.3 36.697 109 64 2 3 111 66 169 4.91e-11 64.3
Msa1444600 AT3G06340.1 36.697 109 64 2 3 111 66 169 4.91e-11 64.3
Msa1444600 AT3G14200.1 45.312 64 33 1 6 67 14 77 5.68e-11 62.0
Msa1444600 AT1G21080.3 42.667 75 42 1 4 78 6 79 6.58e-11 63.5
Msa1444600 AT1G28210.1 31.694 183 71 8 4 184 48 178 6.72e-11 63.5
Msa1444600 AT1G21080.1 42.667 75 42 1 4 78 6 79 6.77e-11 63.5
Msa1444600 AT1G28210.3 31.694 183 71 8 4 184 48 178 6.89e-11 63.5
Msa1444600 AT1G28210.2 31.694 183 71 8 4 184 48 178 7.16e-11 63.5
Msa1444600 AT5G49060.2 49.231 65 31 1 4 68 99 161 9.56e-11 62.8
Msa1444600 AT5G49060.1 49.231 65 31 1 4 68 99 161 9.56e-11 62.8

Find 225 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGAAACTGTTTGTTTA+TGG 0.141711 tig0030761:-18227 None:intergenic
GGTTGTTCATTTCCTTTCTC+TGG 0.197269 tig0030761:-23133 None:intergenic
TTTATCTGTTACAACAAAAT+TGG 0.203550 tig0030761:+20953 Msa1444600:five_prime_UTR
TTTGGATTACTATGAGATTT+TGG 0.205034 tig0030761:+21348 Msa1444600:CDS
TGTGAAGGATTCTTGGAAAT+TGG 0.207598 tig0030761:-23388 None:intergenic
TTAAAGTTTGGCCTAATTAC+TGG 0.231076 tig0030761:-20769 None:intergenic
TTATTGTCAGGATTCTTATC+AGG 0.253732 tig0030761:-21439 None:intergenic
ACAGATTAAACCTTTATTCT+TGG 0.256184 tig0030761:-20496 None:intergenic
ACCCTTCTGTGAAGGATTCT+TGG 0.263216 tig0030761:-23395 None:intergenic
CTGACCATTGCCATAGAAAA+TGG 0.264965 tig0030761:+23322 Msa1444600:CDS
GCCATGTTACCTTGATTTAC+TGG 0.265286 tig0030761:-18707 None:intergenic
CTATGAACATTTCTTAGTTC+TGG 0.271872 tig0030761:-23477 None:intergenic
CTGACAAGGTTTCTAGAAAA+TGG 0.277463 tig0030761:-20744 None:intergenic
GTAGATTTGCTGTGCGTAAT+TGG 0.280019 tig0030761:+20523 Msa1444600:five_prime_UTR
CTTGTGTCAATCTAATAATT+TGG 0.282486 tig0030761:+19701 Msa1444600:five_prime_UTR
CCTTGTCAGTTCCAGTAATT+AGG 0.282558 tig0030761:+20758 Msa1444600:five_prime_UTR
ACATATGGTACGTTGATTAA+TGG 0.286624 tig0030761:+19573 Msa1444600:five_prime_UTR
AAATATGCCATCTGCACTTC+TGG 0.292239 tig0030761:-22445 None:intergenic
AATCCAACCAGGCTGGAAAA+AGG 0.300367 tig0030761:+23093 Msa1444600:CDS
ACCTTCTGCCATCATGAGTT+TGG 0.300403 tig0030761:-22410 None:intergenic
CTCGAAGAGATGATAATAAA+TGG 0.305688 tig0030761:+19741 Msa1444600:five_prime_UTR
CCATCATGAGTTTGGAAGTA+TGG 0.318658 tig0030761:-22402 None:intergenic
GTTCAAAATTCCTGCTAGAT+AGG 0.321641 tig0030761:+20980 Msa1444600:five_prime_UTR
TCTATTATTGTGTTGTTTAA+CGG 0.324706 tig0030761:+20890 Msa1444600:five_prime_UTR
GAACAAAGCTACTCGAATTC+TGG 0.331117 tig0030761:+20268 Msa1444600:five_prime_UTR
ATTATTATTGAACAGGACTA+TGG 0.331207 tig0030761:-21229 None:intergenic
CATAGACCAAAATCATAAAA+TGG 0.335673 tig0030761:-23598 None:intergenic
TCGTGGGTGTCCAGGTCTTT+TGG 0.336631 tig0030761:+22552 Msa1444600:intron
CTTATCAGGGTGCCATTTCA+TGG 0.338061 tig0030761:-21425 None:intergenic
TGTATCTTAGCATGCGTACT+AGG 0.338525 tig0030761:+20180 Msa1444600:five_prime_UTR
CATATGGTACGTTGATTAAT+GGG 0.347931 tig0030761:+19574 Msa1444600:five_prime_UTR
TACAAGACAAGGTAATGATT+TGG 0.349376 tig0030761:+23213 Msa1444600:CDS
AAAACATCGGACAAAATAAC+TGG 0.353907 tig0030761:+18662 Msa1444600:five_prime_UTR
TGTATTAATGTGTGGACTTT+GGG 0.362633 tig0030761:+20337 Msa1444600:five_prime_UTR
GATTCCATGACCAAGAATAA+AGG 0.364161 tig0030761:+20486 Msa1444600:five_prime_UTR
GGAGGAAAACCATGTGAAAA+AGG 0.364683 tig0030761:+19389 Msa1444600:five_prime_UTR
CACCTTCCAACTTACTACTT+TGG 0.365824 tig0030761:+23288 Msa1444600:CDS
CTCATTCCCATTCCTCCATA+AGG 0.366245 tig0030761:-22492 None:intergenic
CTTTCGGTGCAATGATTCAT+AGG 0.370622 tig0030761:+19151 Msa1444600:five_prime_UTR
AGCCTTGAGGAACTTTATAA+AGG 0.373517 tig0030761:+22669 Msa1444600:CDS
ACACAAGATGCACTTGGTTA+TGG 0.374180 tig0030761:-23519 None:intergenic
CTTCACAGAAGGGTAATCTT+AGG 0.375432 tig0030761:+23404 Msa1444600:CDS
AATGTGGTATACTTAAAGTT+TGG 0.376001 tig0030761:-20781 None:intergenic
GGGCGGCGGCTGCAGAGGCA+TGG 0.376556 tig0030761:+22515 Msa1444600:CDS
CGTCACGATCACAACACTTT+CGG 0.378618 tig0030761:+19135 Msa1444600:five_prime_UTR
TGTAATGATTATTATTGAAC+AGG 0.381434 tig0030761:-21236 None:intergenic
CTTGACAGGATGCGGCTTCA+AGG 0.381833 tig0030761:+19951 Msa1444600:five_prime_UTR
GCCGGCAACCACTTCTTCAT+AGG 0.383100 tig0030761:-23356 None:intergenic
GAATTCGAGTAGCTTTGTTC+AGG 0.383912 tig0030761:-20265 None:intergenic
TAGTTTCTGTGAATCAGTTT+AGG 0.385256 tig0030761:+19175 Msa1444600:five_prime_UTR
CTCCCGTACATCCCTGCATC+TGG 0.391895 tig0030761:-19981 None:intergenic
GTTGTTCATTTCCTTTCTCT+GGG 0.397871 tig0030761:-23132 None:intergenic
ATGGAAAGAAGAAAGTGAAT+TGG 0.398728 tig0030761:-18277 None:intergenic
GTACTATAAGTGACCATGTT+AGG 0.400289 tig0030761:-19876 None:intergenic
AAGCAGAAGTTTGTTGAAGC+TGG 0.402220 tig0030761:+20407 Msa1444600:five_prime_UTR
TAATGCTGAAATATTCTGTT+GGG 0.404241 tig0030761:+21082 Msa1444600:five_prime_UTR
TTCCAACTTACTACTTTGGA+TGG 0.408557 tig0030761:+23292 Msa1444600:CDS
AAGCTCCAACTTGCTCGATT+AGG 0.409800 tig0030761:-20086 None:intergenic
TTAACTATATGTAGAAGTTA+TGG 0.409830 tig0030761:+19261 Msa1444600:five_prime_UTR
GATATTAGATGGCTGCATTC+CGG 0.411996 tig0030761:+20298 Msa1444600:five_prime_UTR
ATAGAAAACTTGCCATGAAA+TGG 0.412382 tig0030761:+21413 Msa1444600:CDS
TGGTTCTAGCCTGGTGGATA+AGG 0.413461 tig0030761:+20653 Msa1444600:five_prime_UTR
GGCGGCGGCTGCAGAGGCAT+GGG 0.419490 tig0030761:+22516 Msa1444600:CDS
ATAGGCCACTTGATGCCATC+AGG 0.421765 tig0030761:+19292 Msa1444600:five_prime_UTR
TCAAGCCCTTATGGAGGAAT+GGG 0.422615 tig0030761:+22486 Msa1444600:CDS
TCATTCCCATTCCTCCATAA+GGG 0.426221 tig0030761:-22491 None:intergenic
GCAAGAAGATTGCGAGGTTA+CGG 0.426679 tig0030761:+19227 Msa1444600:five_prime_UTR
ATCAGGCTGGCATCCACGAT+TGG 0.427630 tig0030761:-19544 None:intergenic
CTCATGATGGCAGAAGGTTT+AGG 0.431407 tig0030761:+22415 Msa1444600:CDS
TAAACCTTTATTCTTGGTCA+TGG 0.433411 tig0030761:-20490 None:intergenic
TCAGCATCATTCTTATTGTC+AGG 0.435149 tig0030761:-21451 None:intergenic
ACCATGTCTGTCGGTGTTTG+TGG 0.435390 tig0030761:+21047 Msa1444600:five_prime_UTR
ATATCTGCAGCAATGACATT+TGG 0.437256 tig0030761:-23154 None:intergenic
TGGAAAGAAGAAAGTGAATT+GGG 0.437955 tig0030761:-18276 None:intergenic
ATGGGAGGTGCCTTGCGTCT+TGG 0.439334 tig0030761:-22627 None:intergenic
TCCTATGAAGAAGTGGTTGC+CGG 0.441137 tig0030761:+23355 Msa1444600:CDS
TTCATTGATGAGATGGCTCT+TGG 0.442511 tig0030761:+20053 Msa1444600:five_prime_UTR
TGTGGTGAACGGAAAGCGTT+AGG 0.443296 tig0030761:-18300 None:intergenic
ATTCTGCAACAGATGAGTAT+AGG 0.444169 tig0030761:+19103 Msa1444600:intron
ATGTATTAATGTGTGGACTT+TGG 0.444914 tig0030761:+20336 Msa1444600:five_prime_UTR
AGTCCAACATTATTACTTGA+AGG 0.445082 tig0030761:+23655 Msa1444600:three_prime_UTR
GGAATGGGAATGAGGGGCGG+CGG 0.451910 tig0030761:+22501 Msa1444600:CDS
TACGCATGCTAAGATACAAT+TGG 0.453192 tig0030761:-20175 None:intergenic
CTGGAGGAGATGATATTAGA+TGG 0.454455 tig0030761:+20287 Msa1444600:five_prime_UTR
GGACTTTATTTATGACACTA+AGG 0.455078 tig0030761:-23637 None:intergenic
GTACCATATGTATACGAATC+AGG 0.455428 tig0030761:-19561 None:intergenic
TTACAAGGAGATGCGAGAAA+AGG 0.456525 tig0030761:+19422 Msa1444600:five_prime_UTR
AGGAGCTACTGAGCTATTGC+TGG 0.458525 tig0030761:+20376 Msa1444600:five_prime_UTR
ATGAGGGGCGGCGGCTGCAG+AGG 0.461247 tig0030761:+22510 Msa1444600:CDS
GTTTCAGCATCAACCGTGCT+AGG 0.461527 tig0030761:-23448 None:intergenic
CACATATACCTCATATGCTT+CGG 0.461738 tig0030761:-21494 None:intergenic
GAAAGCAAAGTAGTGGAAGA+TGG 0.462215 tig0030761:+21324 Msa1444600:exon
AATATGCCATCTGCACTTCT+GGG 0.462504 tig0030761:-22444 None:intergenic
TATTGTCAGGATTCTTATCA+GGG 0.462954 tig0030761:-21438 None:intergenic
ACTTATAGTACTTTAATCAA+TGG 0.464152 tig0030761:+19888 Msa1444600:five_prime_UTR
TTGGATGAGATGGAGGAGAA+AGG 0.469622 tig0030761:+19636 Msa1444600:five_prime_UTR
CTTATGGAGGAATGGGAATG+AGG 0.472062 tig0030761:+22493 Msa1444600:CDS
AAAGTAGTGGAAGATGGGTT+TGG 0.472595 tig0030761:+21330 Msa1444600:exon
TTCAAGCCCTTATGGAGGAA+TGG 0.472986 tig0030761:+22485 Msa1444600:CDS
CAGCCTGATTCGTATACATA+TGG 0.475246 tig0030761:+19558 Msa1444600:five_prime_UTR
ACTCATATCCGAAGCATATG+AGG 0.475266 tig0030761:+21486 Msa1444600:CDS
ATGGATGGTTTGTGTAAAAG+TGG 0.477196 tig0030761:+19798 Msa1444600:five_prime_UTR
ATCAATGGACTGTGTAAAGA+AGG 0.477246 tig0030761:+19903 Msa1444600:five_prime_UTR
GTATCTTAGCATGCGTACTA+GGG 0.479861 tig0030761:+20181 Msa1444600:five_prime_UTR
TACGGTATTTGATATTCTTG+TGG 0.480602 tig0030761:+19368 Msa1444600:five_prime_UTR
CAACATTATTGCAAAGACCT+TGG 0.481900 tig0030761:-20136 None:intergenic
AATGGAGTTGTTAGAAGTGA+TGG 0.484604 tig0030761:+19836 Msa1444600:five_prime_UTR
TACAAGGAGATGCGAGAAAA+GGG 0.485030 tig0030761:+19423 Msa1444600:five_prime_UTR
GTTGATCAGAAACTTCACTT+TGG 0.486721 tig0030761:-21192 None:intergenic
AAACCAGATGCAGGGATGTA+CGG 0.487990 tig0030761:+19978 Msa1444600:five_prime_UTR
AAAATCACTTTCCCAGAGAA+AGG 0.488986 tig0030761:+23121 Msa1444600:CDS
ACTTATAGTTCTTTAATGGA+TGG 0.489822 tig0030761:+19783 Msa1444600:five_prime_UTR
TCAGGCTGGCATCCACGATT+GGG 0.490719 tig0030761:-19543 None:intergenic
GAAAAGTGAAAGCAAAGTAG+TGG 0.495138 tig0030761:+21317 Msa1444600:five_prime_UTR
ACATTCCACATTCCCTCATC+CGG 0.496913 tig0030761:-20317 None:intergenic
ATTGTTAGTATTTCCTCCAC+AGG 0.497108 tig0030761:-23067 None:intergenic
GGAAATTGGCATCCTTTCGC+CGG 0.499695 tig0030761:-23374 None:intergenic
TTTATGGAAGAAGATTTAAG+AGG 0.499755 tig0030761:-18211 None:intergenic
AGATGGCTGCATTCCGGATG+AGG 0.501610 tig0030761:+20304 Msa1444600:five_prime_UTR
TTGACAGGATGCGGCTTCAA+GGG 0.502557 tig0030761:+19952 Msa1444600:five_prime_UTR
AAAGCAAAGTAGTGGAAGAT+GGG 0.505371 tig0030761:+21325 Msa1444600:exon
CGCCTTGATCAAAATATTGA+GGG 0.505835 tig0030761:-19466 None:intergenic
GTCCATCCAAAGTAGTAAGT+TGG 0.505940 tig0030761:-23294 None:intergenic
GATTGATCGCACGAGAATGC+AGG 0.507692 tig0030761:-18188 None:intergenic
AGGGGTATCTCTGTTGAGAT+TGG 0.508364 tig0030761:+20200 Msa1444600:five_prime_UTR
CAAGGGTTGAAACCAGATGC+AGG 0.510190 tig0030761:+19969 Msa1444600:five_prime_UTR
AGCAGAAGTTTGTTGAAGCT+GGG 0.510507 tig0030761:+20408 Msa1444600:five_prime_UTR
AACCAGATGCAGGGATGTAC+GGG 0.512657 tig0030761:+19979 Msa1444600:five_prime_UTR
TAGAGATTCTTGACAGGATG+CGG 0.517119 tig0030761:+19943 Msa1444600:five_prime_UTR
TTCCAAGAATCCTTCACAGA+AGG 0.519442 tig0030761:+23393 Msa1444600:CDS
CCTAATTACTGGAACTGACA+AGG 0.522114 tig0030761:-20758 None:intergenic
CTAATGCTGAAATATTCTGT+TGG 0.522702 tig0030761:+21081 Msa1444600:five_prime_UTR
TGATCAAACCCATTACATGA+TGG 0.522879 tig0030761:+20708 Msa1444600:five_prime_UTR
AATCCTTCAAGTAATAATGT+TGG 0.523941 tig0030761:-23658 None:intergenic
ATTGATGAGATGGCTCTTGG+CGG 0.525844 tig0030761:+20056 Msa1444600:five_prime_UTR
AAGCTGTAGAGATTCTTGAC+AGG 0.525923 tig0030761:+19937 Msa1444600:five_prime_UTR
TTCAAAATTCCTGCTAGATA+GGG 0.527697 tig0030761:+20981 Msa1444600:five_prime_UTR
AGCAAACTTCATTGATGAGA+TGG 0.529445 tig0030761:+20046 Msa1444600:five_prime_UTR
AAAGGAACTGTTGGATGAGA+TGG 0.530854 tig0030761:+19626 Msa1444600:five_prime_UTR
GGAGGAATGGGAATGAGGGG+CGG 0.532345 tig0030761:+22498 Msa1444600:CDS
TCCAAGAATCCTTCACAGAA+GGG 0.533320 tig0030761:+23394 Msa1444600:CDS
TTATGGAGGAATGGGAATGA+GGG 0.534716 tig0030761:+22494 Msa1444600:CDS
GCGCCTTGATCAAAATATTG+AGG 0.536873 tig0030761:-19467 None:intergenic
TTGAGGGAAACAACACTTGG+TGG 0.539675 tig0030761:-19450 None:intergenic
GATTTGCTGTGCGTAATTGG+AGG 0.540099 tig0030761:+20526 Msa1444600:five_prime_UTR
TGGACATTCTTCACAAGCAA+TGG 0.541650 tig0030761:+19818 Msa1444600:five_prime_UTR
GACTTTATTTATGACACTAA+GGG 0.541822 tig0030761:-23636 None:intergenic
TAGTCAGGCAAAGGAACTGT+TGG 0.544319 tig0030761:+19617 Msa1444600:five_prime_UTR
AAGAAGTGGTTGCCGGCGAA+AGG 0.544486 tig0030761:+23362 Msa1444600:CDS
ACATATTTACCCTATCTAGC+AGG 0.545164 tig0030761:-20990 None:intergenic
TGCAGAGGCATGGGCATGAG+AGG 0.547127 tig0030761:+22525 Msa1444600:CDS
TAATGTGTGGACTTTGGGAT+CGG 0.547364 tig0030761:+20342 Msa1444600:five_prime_UTR
GACGCAGAAGTCTTACCTTA+CGG 0.549292 tig0030761:+19350 Msa1444600:five_prime_UTR
GTATGTTTGCCTTATCCACC+AGG 0.553164 tig0030761:-20662 None:intergenic
AGTTACACTAGTTTGATACA+TGG 0.553978 tig0030761:+19678 Msa1444600:five_prime_UTR
TGTTGCATTCCAGTAAATCA+AGG 0.554299 tig0030761:+18698 Msa1444600:five_prime_UTR
TGTCAATCTAATAATTTGGA+CGG 0.554613 tig0030761:+19705 Msa1444600:five_prime_UTR
TTCGAATTCATCTCCGATGT+CGG 0.555714 tig0030761:+18326 Msa1444600:five_prime_UTR
CACAATGTATTTACAAGACA+AGG 0.557753 tig0030761:+23202 Msa1444600:CDS
TTATGGAAGAAGATTTAAGA+GGG 0.558081 tig0030761:-18210 None:intergenic
CAATTGAAATCCAACCAGGC+TGG 0.559519 tig0030761:+23086 Msa1444600:CDS
CCATACTTCCAAACTCATGA+TGG 0.563682 tig0030761:+22402 Msa1444600:CDS
GTGAACGGAAAGCGTTAGGA+TGG 0.563921 tig0030761:-18296 None:intergenic
GGTATTTGATATTCTTGTGG+AGG 0.566202 tig0030761:+19371 Msa1444600:five_prime_UTR
TGATCCATCCTATGAAGAAG+TGG 0.566754 tig0030761:+23348 Msa1444600:CDS
AATGAAGCAAGAAGATTGCG+AGG 0.566982 tig0030761:+19221 Msa1444600:five_prime_UTR
GCAACAGATGAGTATAGGAA+TGG 0.567993 tig0030761:+19108 Msa1444600:intron
GAAGTTATGGACGTGTGCAT+AGG 0.571819 tig0030761:+19274 Msa1444600:five_prime_UTR
CATATGTATACGAATCAGGC+TGG 0.574821 tig0030761:-19557 None:intergenic
CTAAGATTACCCTTCTGTGA+AGG 0.575988 tig0030761:-23403 None:intergenic
GCATTCCGGATGAGGGAATG+TGG 0.576334 tig0030761:+20312 Msa1444600:five_prime_UTR
TACAATTGGAATGAGCGAGT+TGG 0.577733 tig0030761:-20161 None:intergenic
AACAAAATGAACCAAAACAT+CGG 0.577758 tig0030761:+18649 Msa1444600:five_prime_UTR
TGTCTTGTAAATACATTGTG+AGG 0.577798 tig0030761:-23199 None:intergenic
GCAACCACTTCTTCATAGGA+TGG 0.578289 tig0030761:-23352 None:intergenic
GCTGCACTGTCACCTGCTGT+AGG 0.578443 tig0030761:-22378 None:intergenic
GATGGCTGCATTCCGGATGA+GGG 0.578984 tig0030761:+20305 Msa1444600:five_prime_UTR
AAAGAAAGTCCTATCTTGAG+TGG 0.579591 tig0030761:+21290 Msa1444600:five_prime_UTR
TATCCACCAGGCTAGAACCA+TGG 0.582402 tig0030761:-20650 None:intergenic
CTAGTGTAACTAACAACAGA+AGG 0.583490 tig0030761:-19666 None:intergenic
TCCAAACTCATGATGGCAGA+AGG 0.585224 tig0030761:+22409 Msa1444600:CDS
TTCAATCCCAGAAGTGCAGA+TGG 0.585321 tig0030761:+22438 Msa1444600:CDS
TAAAGTTCCTCAAGGCTGCA+AGG 0.586456 tig0030761:-22663 None:intergenic
TACCTTTATAAAGTTCCTCA+AGG 0.588311 tig0030761:-22671 None:intergenic
CAAGAATATCAAATACCGTA+AGG 0.590388 tig0030761:-19365 None:intergenic
TAAATTGCCTTGCAGCCTTG+AGG 0.591013 tig0030761:+22656 Msa1444600:CDS
AATGTGTGGACTTTCTCTGA+TGG 0.591588 tig0030761:+20458 Msa1444600:five_prime_UTR
TTTCCATGGTTCTAGCCTGG+TGG 0.591889 tig0030761:+20647 Msa1444600:five_prime_UTR
CTTACTACTTTGGATGGACG+AGG 0.593609 tig0030761:+23298 Msa1444600:CDS
TAGGCCACTTGATGCCATCA+GGG 0.594845 tig0030761:+19293 Msa1444600:five_prime_UTR
TTTCAGCATCAACCGTGCTA+GGG 0.595565 tig0030761:-23447 None:intergenic
ATGCATAACATGGTTGTCCA+AGG 0.596435 tig0030761:+20119 Msa1444600:five_prime_UTR
CAAAAGATATTACTTGCAGA+AGG 0.606997 tig0030761:+23244 Msa1444600:CDS
GGAACTGTTGGATGAGATGG+AGG 0.611124 tig0030761:+19629 Msa1444600:five_prime_UTR
ATCCAAAGTAGTAAGTTGGA+AGG 0.613336 tig0030761:-23290 None:intergenic
TCTCACCTAATCGAGCAAGT+TGG 0.613681 tig0030761:+20081 Msa1444600:five_prime_UTR
CATCTTATAGAAAACCCTGA+TGG 0.614744 tig0030761:-19307 None:intergenic
CAACATCACATTCCCTAGCA+CGG 0.615494 tig0030761:+23435 Msa1444600:CDS
AGAAGATTGCGAGGTTACGG+AGG 0.616046 tig0030761:+19230 Msa1444600:five_prime_UTR
TTTGCACTATGAAAAGAATG+TGG 0.619290 tig0030761:-20797 None:intergenic
TACTATACACAAGATGCACT+TGG 0.619548 tig0030761:-23525 None:intergenic
AGAGTGTCTACAAACAGAGC+AGG 0.623091 tig0030761:-20565 None:intergenic
CTGTTACAACAAAATTGGAG+AGG 0.623790 tig0030761:+20958 Msa1444600:five_prime_UTR
CTAACAATTGAAATCCAACC+AGG 0.624854 tig0030761:+23082 Msa1444600:CDS
TTTCGTGAAATGCCCAATCG+TGG 0.626478 tig0030761:+19531 Msa1444600:five_prime_UTR
GAGAGAGAACTGACCGACAT+CGG 0.629723 tig0030761:-18339 None:intergenic
AAGGGTTGAAACCAGATGCA+GGG 0.632193 tig0030761:+19970 Msa1444600:five_prime_UTR
AATGCTGAAATATTCTGTTG+GGG 0.632569 tig0030761:+21083 Msa1444600:five_prime_UTR
AATAATAGATAAAATATCTG+AGG 0.635109 tig0030761:-20876 None:intergenic
TCATGTCAGAATGCATAACA+TGG 0.636786 tig0030761:+20109 Msa1444600:five_prime_UTR
AATCAGTTTAGGCAAGCTGA+AGG 0.639031 tig0030761:+19186 Msa1444600:five_prime_UTR
TCCACAAACACCGACAGACA+TGG 0.640708 tig0030761:-21048 None:intergenic
GAGTCAAGCTCCAAGACGCA+AGG 0.642529 tig0030761:+22617 Msa1444600:CDS
GAAAGCTGCAAGCAGCACAA+AGG 0.647125 tig0030761:-20016 None:intergenic
ATGTGGAATGTATTAATGTG+TGG 0.649960 tig0030761:+20329 Msa1444600:five_prime_UTR
TATCTTAGCATGCGTACTAG+GGG 0.654059 tig0030761:+20182 Msa1444600:five_prime_UTR
AAAACCCTGATGGCATCAAG+TGG 0.657938 tig0030761:-19297 None:intergenic
GACTGAAATGTATTAATGTG+TGG 0.658305 tig0030761:+20444 Msa1444600:five_prime_UTR
ATTCTCACTATACTTTAACA+AGG 0.659955 tig0030761:+20916 Msa1444600:five_prime_UTR
CAAAGCTACTCGAATTCTGG+AGG 0.661635 tig0030761:+20271 Msa1444600:five_prime_UTR
AATGGGTTTGATCAAAACAG+AGG 0.666607 tig0030761:-20699 None:intergenic
GTAAGGTAAGACTTCTGCGT+CGG 0.668696 tig0030761:-19348 None:intergenic
ATATTGAGGGAAACAACACT+TGG 0.678647 tig0030761:-19453 None:intergenic
TATGGAGGAATGGGAATGAG+GGG 0.684119 tig0030761:+22495 Msa1444600:CDS
ATGTACGGGAGAATCATAAG+CGG 0.716926 tig0030761:+19993 Msa1444600:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAGTATTTTCAATT+TGG + tig0030761:18968-18987 Msa1444600:intron 10.0%
!!! TTTTTAAGTATTTTCAATTT+GGG + tig0030761:18969-18988 Msa1444600:intron 10.0%
!!! TGAATTCATTTTTTTTTGTT+AGG + tig0030761:18368-18387 Msa1444600:intron 15.0%
!! TCAATCAAAAATGATAAAAA+TGG - tig0030761:18588-18607 None:intergenic 15.0%
!!! TACTTAAAAATGAATGATTT+TGG - tig0030761:18959-18978 None:intergenic 15.0%
!!! TTTTACTTATAGTTCTTTAA+TGG + tig0030761:19779-19798 Msa1444600:five_prime_UTR 15.0%
!!! TTTTCTGATTACTATTTATA+TGG + tig0030761:20846-20865 Msa1444600:five_prime_UTR 15.0%
!! AATAATAGATAAAATATCTG+AGG - tig0030761:20879-20898 None:intergenic 15.0%
!! TTAACTATATGTAGAAGTTA+TGG + tig0030761:19261-19280 Msa1444600:five_prime_UTR 20.0%
!! GAACTATAAGTAAAAACATT+TGG - tig0030761:19774-19793 None:intergenic 20.0%
!! ACTTATAGTACTTTAATCAA+TGG + tig0030761:19888-19907 Msa1444600:five_prime_UTR 20.0%
!! AAAAATAACCATCATGTAAT+GGG - tig0030761:20719-20738 None:intergenic 20.0%
!! TAAAAATAACCATCATGTAA+TGG - tig0030761:20720-20739 None:intergenic 20.0%
!! AGTAATCAGAAAAATAAGAA+TGG - tig0030761:20839-20858 None:intergenic 20.0%
!!! TCTATTATTGTGTTGTTTAA+CGG + tig0030761:20890-20909 Msa1444600:five_prime_UTR 20.0%
!! TTTATCTGTTACAACAAAAT+TGG + tig0030761:20953-20972 Msa1444600:five_prime_UTR 20.0%
!! TGTAATGATTATTATTGAAC+AGG - tig0030761:21239-21258 None:intergenic 20.0%
!!! AAATTGAAAATTGAGGATTT+TGG - tig0030761:21803-21822 None:intergenic 20.0%
!! AAGGAAAAAATTGAAAATTG+AGG - tig0030761:21810-21829 None:intergenic 20.0%
!!! TTTTTATTTTGGTAAAACCA+AGG - tig0030761:22059-22078 None:intergenic 20.0%
!!! ATTGAAATTTTACTGAATGA+TGG - tig0030761:22166-22185 None:intergenic 20.0%
!!! TTTCTTCCATTTTATGATTT+TGG + tig0030761:23592-23611 Msa1444600:three_prime_UTR 20.0%
! TTATGGAAGAAGATTTAAGA+GGG - tig0030761:18213-18232 None:intergenic 25.0%
! TTTATGGAAGAAGATTTAAG+AGG - tig0030761:18214-18233 None:intergenic 25.0%
! AAGAAGAAACTGTTTGTTTA+TGG - tig0030761:18230-18249 None:intergenic 25.0%
! TTCTGACAATTAATTTCCTT+TGG + tig0030761:18397-18416 Msa1444600:intron 25.0%
! ATGAACGTATATTTAGTGTT+TGG + tig0030761:18429-18448 Msa1444600:intron 25.0%
! TATTTAGTGTTTGGTATCTT+AGG + tig0030761:18438-18457 Msa1444600:intron 25.0%
! AACAAAATGAACCAAAACAT+CGG + tig0030761:18649-18668 Msa1444600:five_prime_UTR 25.0%
!!! ATTTTCAATTTGGGTTATCA+TGG + tig0030761:18978-18997 Msa1444600:intron 25.0%
!! CTAGTAAAACTTTGTTTAAG+TGG + tig0030761:19001-19020 Msa1444600:intron 25.0%
!!! ACTGAATTTGTAATTTGCTT+TGG - tig0030761:19027-19046 None:intergenic 25.0%
! CAAACTTAGAAAAATTAGTC+AGG + tig0030761:19602-19621 Msa1444600:five_prime_UTR 25.0%
! CTTGTGTCAATCTAATAATT+TGG + tig0030761:19701-19720 Msa1444600:five_prime_UTR 25.0%
! TGTCAATCTAATAATTTGGA+CGG + tig0030761:19705-19724 Msa1444600:five_prime_UTR 25.0%
! ACTTATAGTTCTTTAATGGA+TGG + tig0030761:19783-19802 Msa1444600:five_prime_UTR 25.0%
! ACAGATTAAACCTTTATTCT+TGG - tig0030761:20499-20518 None:intergenic 25.0%
! AATGTGGTATACTTAAAGTT+TGG - tig0030761:20784-20803 None:intergenic 25.0%
! ATTCTCACTATACTTTAACA+AGG + tig0030761:20916-20935 Msa1444600:five_prime_UTR 25.0%
! TAATGCTGAAATATTCTGTT+GGG + tig0030761:21082-21101 Msa1444600:five_prime_UTR 25.0%
! ATTATTATTGAACAGGACTA+TGG - tig0030761:21232-21251 None:intergenic 25.0%
!! TTTGGATTACTATGAGATTT+TGG + tig0030761:21348-21367 Msa1444600:CDS 25.0%
! GTTTAATTGCTACAAAACTA+TGG + tig0030761:21539-21558 Msa1444600:intron 25.0%
!!! ATTATCTTGTTTCTCTGTTT+TGG + tig0030761:21609-21628 Msa1444600:intron 25.0%
!!! AAAATTGAGGATTTTGGTAA+GGG - tig0030761:21797-21816 None:intergenic 25.0%
!! ATATGTTTTTCCATATACCA+CGG - tig0030761:21961-21980 None:intergenic 25.0%
! GGAAAAACATATCTTATGAT+AGG + tig0030761:21969-21988 Msa1444600:intron 25.0%
! GTAACTAAGATCAATTTAAG+AGG - tig0030761:21999-22018 None:intergenic 25.0%
! ATTGATCTTAGTTACTTCAA+AGG + tig0030761:22004-22023 Msa1444600:intron 25.0%
!!! GCACACAATTCTTTTTATTT+TGG - tig0030761:22070-22089 None:intergenic 25.0%
!! ACTTGTTGAGTAATGTTATA+AGG + tig0030761:22113-22132 Msa1444600:intron 25.0%
! CTTGTTGAGTAATGTTATAA+GGG + tig0030761:22114-22133 Msa1444600:intron 25.0%
!!! CAAGGCAATTTATTTTCAAT+GGG - tig0030761:22648-22667 None:intergenic 25.0%
! AGTTTCAATACATTTCTAAC+TGG + tig0030761:22852-22871 Msa1444600:intron 25.0%
! ATAAGATGTAGTTACAAAGT+TGG - tig0030761:22918-22937 None:intergenic 25.0%
! CATAGACCAAAATCATAAAA+TGG - tig0030761:23601-23620 None:intergenic 25.0%
!! GACTTTATTTATGACACTAA+GGG - tig0030761:23639-23658 None:intergenic 25.0%
! AATCCTTCAAGTAATAATGT+TGG - tig0030761:23661-23680 None:intergenic 25.0%
TGGAAAGAAGAAAGTGAATT+GGG - tig0030761:18279-18298 None:intergenic 30.0%
ATGGAAAGAAGAAAGTGAAT+TGG - tig0030761:18280-18299 None:intergenic 30.0%
! AATTCGAATTTTGTGGTGAA+CGG - tig0030761:18314-18333 None:intergenic 30.0%
CGTTCATAATCAAAATCCAA+AGG - tig0030761:18416-18435 None:intergenic 30.0%
! TTACAGAGCATGTTTTCAAT+CGG + tig0030761:18522-18541 Msa1444600:intron 30.0%
!!! AAAACTGCTACGTTTTTTCT+TGG + tig0030761:18554-18573 Msa1444600:intron 30.0%
! TTGCGTTTTCAGTAAATAAC+TGG + tig0030761:18625-18644 Msa1444600:intron 30.0%
!! AGTTATTTTGTCCGATGTTT+TGG - tig0030761:18663-18682 None:intergenic 30.0%
AAAACATCGGACAAAATAAC+TGG + tig0030761:18662-18681 Msa1444600:five_prime_UTR 30.0%
ACTGTGATTGGAGAATTTAA+TGG - tig0030761:18735-18754 None:intergenic 30.0%
!! TTAGGTTTAGTTTGAGACTT+GGG - tig0030761:18855-18874 None:intergenic 30.0%
AAAAGATACTACACTGAATC+TGG - tig0030761:18928-18947 None:intergenic 30.0%
AAAGCTAATAAAAGCCGAAA+AGG + tig0030761:19053-19072 Msa1444600:intron 30.0%
TAGTTTCTGTGAATCAGTTT+AGG + tig0030761:19175-19194 Msa1444600:five_prime_UTR 30.0%
CAAGAATATCAAATACCGTA+AGG - tig0030761:19368-19387 None:intergenic 30.0%
TACGGTATTTGATATTCTTG+TGG + tig0030761:19368-19387 Msa1444600:five_prime_UTR 30.0%
!!! AAAGGCTATTGGTTTTTACA+AGG + tig0030761:19407-19426 Msa1444600:five_prime_UTR 30.0%
!!! TTCCCTCAATATTTTGATCA+AGG + tig0030761:19464-19483 Msa1444600:five_prime_UTR 30.0%
! ACATATGGTACGTTGATTAA+TGG + tig0030761:19573-19592 Msa1444600:five_prime_UTR 30.0%
! CATATGGTACGTTGATTAAT+GGG + tig0030761:19574-19593 Msa1444600:five_prime_UTR 30.0%
TAGAAAAATTAGTCAGGCAA+AGG + tig0030761:19608-19627 Msa1444600:five_prime_UTR 30.0%
! AGTTACACTAGTTTGATACA+TGG + tig0030761:19678-19697 Msa1444600:five_prime_UTR 30.0%
CTCGAAGAGATGATAATAAA+TGG + tig0030761:19741-19760 Msa1444600:five_prime_UTR 30.0%
ATGTGGAATGTATTAATGTG+TGG + tig0030761:20329-20348 Msa1444600:five_prime_UTR 30.0%
ATGTATTAATGTGTGGACTT+TGG + tig0030761:20336-20355 Msa1444600:five_prime_UTR 30.0%
TGTATTAATGTGTGGACTTT+GGG + tig0030761:20337-20356 Msa1444600:five_prime_UTR 30.0%
GACTGAAATGTATTAATGTG+TGG + tig0030761:20444-20463 Msa1444600:five_prime_UTR 30.0%
TAAACCTTTATTCTTGGTCA+TGG - tig0030761:20493-20512 None:intergenic 30.0%
TTACAGTTTCAAAAAAGGTC+GGG - tig0030761:20600-20619 None:intergenic 30.0%
GTTACAGTTTCAAAAAAGGT+CGG - tig0030761:20601-20620 None:intergenic 30.0%
CATCGTTACAGTTTCAAAAA+AGG - tig0030761:20605-20624 None:intergenic 30.0%
! TGTTGCAAAAAGATTTTCCA+TGG + tig0030761:20633-20652 Msa1444600:five_prime_UTR 30.0%
TTAAAGTTTGGCCTAATTAC+TGG - tig0030761:20772-20791 None:intergenic 30.0%
TTTGCACTATGAAAAGAATG+TGG - tig0030761:20800-20819 None:intergenic 30.0%
TTCAAAATTCCTGCTAGATA+GGG + tig0030761:20981-21000 Msa1444600:five_prime_UTR 30.0%
CTAATGCTGAAATATTCTGT+TGG + tig0030761:21081-21100 Msa1444600:five_prime_UTR 30.0%
AATGCTGAAATATTCTGTTG+GGG + tig0030761:21083-21102 Msa1444600:five_prime_UTR 30.0%
ATAGAAAACTTGCCATGAAA+TGG + tig0030761:21413-21432 Msa1444600:CDS 30.0%
TATTGTCAGGATTCTTATCA+GGG - tig0030761:21441-21460 None:intergenic 30.0%
TTATTGTCAGGATTCTTATC+AGG - tig0030761:21442-21461 None:intergenic 30.0%
!! TGTTTACTGTCTTTTGTTTG+AGG + tig0030761:21655-21674 Msa1444600:intron 30.0%
AAATTCTTTGACCCTTCTTA+GGG - tig0030761:21755-21774 None:intergenic 30.0%
AAAATTCTTTGACCCTTCTT+AGG - tig0030761:21756-21775 None:intergenic 30.0%
!! GAAAATTGAGGATTTTGGTA+AGG - tig0030761:21798-21817 None:intergenic 30.0%
ACATTCAGATTGGATAATGA+AGG - tig0030761:21829-21848 None:intergenic 30.0%
TTCATTATCCAATCTGAATG+TGG + tig0030761:21828-21847 Msa1444600:intron 30.0%
! TTTGACTTTCATCCTAAGTA+AGG + tig0030761:21894-21913 Msa1444600:intron 30.0%
GATGGAAAATAAGTACAACA+AGG - tig0030761:22148-22167 None:intergenic 30.0%
! TCTGACGTAGTATATTGATT+TGG + tig0030761:22276-22295 Msa1444600:intron 30.0%
!! AGTATATTGATTTGGCTTCA+TGG + tig0030761:22284-22303 Msa1444600:intron 30.0%
! TCATAAATTGCTCTCTTTTG+CGG - tig0030761:22324-22343 None:intergenic 30.0%
!! CTGTAGGCATTTCATTTTTA+AGG - tig0030761:22365-22384 None:intergenic 30.0%
! ATTTTCGGCAAAGATGTATT+TGG + tig0030761:22579-22598 Msa1444600:CDS 30.0%
!! GCAAGGCAATTTATTTTCAA+TGG - tig0030761:22649-22668 None:intergenic 30.0%
TACCTTTATAAAGTTCCTCA+AGG - tig0030761:22674-22693 None:intergenic 30.0%
CAAAAAGATGAAGATCTCAA+GGG + tig0030761:22698-22717 Msa1444600:CDS 30.0%
TGATGTGAATTAAAAAGCCA+GGG - tig0030761:22756-22775 None:intergenic 30.0%
TTGATGTGAATTAAAAAGCC+AGG - tig0030761:22757-22776 None:intergenic 30.0%
TTCAATACATTTCTAACTGG+CGG + tig0030761:22855-22874 Msa1444600:intron 30.0%
TGTCTTGTAAATACATTGTG+AGG - tig0030761:23202-23221 None:intergenic 30.0%
CACAATGTATTTACAAGACA+AGG + tig0030761:23202-23221 Msa1444600:CDS 30.0%
TACAAGACAAGGTAATGATT+TGG + tig0030761:23213-23232 Msa1444600:CDS 30.0%
CAAAAGATATTACTTGCAGA+AGG + tig0030761:23244-23263 Msa1444600:CDS 30.0%
! AATTCCATTTTCTATGGCAA+TGG - tig0030761:23329-23348 None:intergenic 30.0%
! TGGATCAATTCCATTTTCTA+TGG - tig0030761:23335-23354 None:intergenic 30.0%
CTATGAACATTTCTTAGTTC+TGG - tig0030761:23480-23499 None:intergenic 30.0%
! GGACTTTATTTATGACACTA+AGG - tig0030761:23640-23659 None:intergenic 30.0%
AGTCCAACATTATTACTTGA+AGG + tig0030761:23655-23674 Msa1444600:three_prime_UTR 30.0%
! GGAGATGAATTCGAATTTTG+TGG - tig0030761:18321-18340 None:intergenic 35.0%
TGTTGCATTCCAGTAAATCA+AGG + tig0030761:18698-18717 Msa1444600:five_prime_UTR 35.0%
TCCAGTAAATCAAGGTAACA+TGG + tig0030761:18706-18725 Msa1444600:intron 35.0%
CACGAAATCAAAACTGTGAT+TGG - tig0030761:18747-18766 None:intergenic 35.0%
TCAGTTAACACAGTTCTCAA+AGG + tig0030761:18785-18804 Msa1444600:intron 35.0%
!! GTTAGGTTTAGTTTGAGACT+TGG - tig0030761:18856-18875 None:intergenic 35.0%
TAACTCCAACATTGAACACA+CGG + tig0030761:18872-18891 Msa1444600:intron 35.0%
!!! AGCTTTGTTTACGTCCTTTT+CGG - tig0030761:19070-19089 None:intergenic 35.0%
ATTCTGCAACAGATGAGTAT+AGG + tig0030761:19103-19122 Msa1444600:intron 35.0%
CATCTTATAGAAAACCCTGA+TGG - tig0030761:19310-19329 None:intergenic 35.0%
! CATCAGGGTTTTCTATAAGA+TGG + tig0030761:19308-19327 Msa1444600:five_prime_UTR 35.0%
! AGGGTTTTCTATAAGATGGA+AGG + tig0030761:19312-19331 Msa1444600:five_prime_UTR 35.0%
! CTATAAGATGGAAGGTTTTC+AGG + tig0030761:19320-19339 Msa1444600:five_prime_UTR 35.0%
GGTATTTGATATTCTTGTGG+AGG + tig0030761:19371-19390 Msa1444600:five_prime_UTR 35.0%
AACCATGTGAAAAAGGCTAT+TGG + tig0030761:19396-19415 Msa1444600:five_prime_UTR 35.0%
!! AACCAATAGCCTTTTTCACA+TGG - tig0030761:19401-19420 None:intergenic 35.0%
ATATTGAGGGAAACAACACT+TGG - tig0030761:19456-19475 None:intergenic 35.0%
CGCCTTGATCAAAATATTGA+GGG - tig0030761:19469-19488 None:intergenic 35.0%
GTACCATATGTATACGAATC+AGG - tig0030761:19564-19583 None:intergenic 35.0%
CTAGTGTAACTAACAACAGA+AGG - tig0030761:19669-19688 None:intergenic 35.0%
! ATGGATGGTTTGTGTAAAAG+TGG + tig0030761:19798-19817 Msa1444600:five_prime_UTR 35.0%
AATGGAGTTGTTAGAAGTGA+TGG + tig0030761:19836-19855 Msa1444600:five_prime_UTR 35.0%
GTACTATAAGTGACCATGTT+AGG - tig0030761:19879-19898 None:intergenic 35.0%
!! ATCAATGGACTGTGTAAAGA+AGG + tig0030761:19903-19922 Msa1444600:five_prime_UTR 35.0%
AGCAAACTTCATTGATGAGA+TGG + tig0030761:20046-20065 Msa1444600:five_prime_UTR 35.0%
TCATGTCAGAATGCATAACA+TGG + tig0030761:20109-20128 Msa1444600:five_prime_UTR 35.0%
CAACATTATTGCAAAGACCT+TGG - tig0030761:20139-20158 None:intergenic 35.0%
TACGCATGCTAAGATACAAT+TGG - tig0030761:20178-20197 None:intergenic 35.0%
!! GTCAAATGTTTTTGCAAGAG+AGG + tig0030761:20239-20258 Msa1444600:five_prime_UTR 35.0%
GATTCCATGACCAAGAATAA+AGG + tig0030761:20486-20505 Msa1444600:five_prime_UTR 35.0%
! AATGGGTTTGATCAAAACAG+AGG - tig0030761:20702-20721 None:intergenic 35.0%
TGATCAAACCCATTACATGA+TGG + tig0030761:20708-20727 Msa1444600:five_prime_UTR 35.0%
! CTGACAAGGTTTCTAGAAAA+TGG - tig0030761:20747-20766 None:intergenic 35.0%
CTGTTACAACAAAATTGGAG+AGG + tig0030761:20958-20977 Msa1444600:five_prime_UTR 35.0%
GTTCAAAATTCCTGCTAGAT+AGG + tig0030761:20980-20999 Msa1444600:five_prime_UTR 35.0%
ACATATTTACCCTATCTAGC+AGG - tig0030761:20993-21012 None:intergenic 35.0%
GTTGATCAGAAACTTCACTT+TGG - tig0030761:21195-21214 None:intergenic 35.0%
!!! CAGGTTTTTTGTCTTGTTTC+TGG - tig0030761:21266-21285 None:intergenic 35.0%
! GATAGGACTTTCTTTTCTTC+AGG - tig0030761:21285-21304 None:intergenic 35.0%
AAAGAAAGTCCTATCTTGAG+TGG + tig0030761:21290-21309 Msa1444600:five_prime_UTR 35.0%
! TTTTCTCTTCCACTCAAGAT+AGG - tig0030761:21302-21321 None:intergenic 35.0%
GAAAAGTGAAAGCAAAGTAG+TGG + tig0030761:21317-21336 Msa1444600:five_prime_UTR 35.0%
! AAAGCAAAGTAGTGGAAGAT+GGG + tig0030761:21325-21344 Msa1444600:exon 35.0%
! GGATTACTATGAGATTTTGG+AGG + tig0030761:21351-21370 Msa1444600:CDS 35.0%
TCAGCATCATTCTTATTGTC+AGG - tig0030761:21454-21473 None:intergenic 35.0%
CACATATACCTCATATGCTT+CGG - tig0030761:21497-21516 None:intergenic 35.0%
! ACTGATCATTCATGTTTCTG+AGG + tig0030761:21565-21584 Msa1444600:intron 35.0%
! GTGTTTGAGATCCAATTTGA+TGG + tig0030761:21689-21708 Msa1444600:intron 35.0%
ACTGATTGTAGCCATCAAAT+TGG - tig0030761:21703-21722 None:intergenic 35.0%
TACAATCAGTGACATACAGT+CGG + tig0030761:21713-21732 Msa1444600:intron 35.0%
AATTCTTTGACCCTTCTTAG+GGG - tig0030761:21754-21773 None:intergenic 35.0%
AACATGGATAGACAAAGAGT+TGG - tig0030761:22215-22234 None:intergenic 35.0%
TCTTTGTCTATCCATGTTGT+GGG + tig0030761:22217-22236 Msa1444600:intron 35.0%
CAGATTCTGTGAACATTTCA+TGG - tig0030761:22260-22279 None:intergenic 35.0%
!! ATATTGATTTGGCTTCATGG+AGG + tig0030761:22287-22306 Msa1444600:intron 35.0%
AAAAATGAAATGCCTACAGC+AGG + tig0030761:22366-22385 Msa1444600:CDS 35.0%
! GGCATATTTGCAGAAGTTTT+TGG + tig0030761:22459-22478 Msa1444600:CDS 35.0%
! AGGTCTTTTGGCGATATTTT+CGG + tig0030761:22564-22583 Msa1444600:intron 35.0%
!! GGCAATTTATTTTCAATGGG+AGG - tig0030761:22645-22664 None:intergenic 35.0%
AGCCTTGAGGAACTTTATAA+AGG + tig0030761:22669-22688 Msa1444600:CDS 35.0%
! CCTTGAGATCTTCATCTTTT+TGG - tig0030761:22700-22719 None:intergenic 35.0%
CCAAAAAGATGAAGATCTCA+AGG + tig0030761:22697-22716 Msa1444600:CDS 35.0%
GATGTGAATTAAAAAGCCAG+GGG - tig0030761:22755-22774 None:intergenic 35.0%
!!! GCAGAATGAGAGTTTTTTGT+TGG + tig0030761:22813-22832 Msa1444600:intron 35.0%
ACTTGTAGACACACATGAAA+GGG - tig0030761:22996-23015 None:intergenic 35.0%
TACTTGTAGACACACATGAA+AGG - tig0030761:22997-23016 None:intergenic 35.0%
ATTGTTAGTATTTCCTCCAC+AGG - tig0030761:23070-23089 None:intergenic 35.0%
CTAACAATTGAAATCCAACC+AGG + tig0030761:23082-23101 Msa1444600:CDS 35.0%
AAAATCACTTTCCCAGAGAA+AGG + tig0030761:23121-23140 Msa1444600:CDS 35.0%
GTTGTTCATTTCCTTTCTCT+GGG - tig0030761:23135-23154 None:intergenic 35.0%
! ATCCAAAGTAGTAAGTTGGA+AGG - tig0030761:23293-23312 None:intergenic 35.0%
TTCCAACTTACTACTTTGGA+TGG + tig0030761:23292-23311 Msa1444600:CDS 35.0%
TGTGAAGGATTCTTGGAAAT+TGG - tig0030761:23391-23410 None:intergenic 35.0%
TACTATACACAAGATGCACT+TGG - tig0030761:23528-23547 None:intergenic 35.0%
TTCGAATTCATCTCCGATGT+CGG + tig0030761:18326-18345 Msa1444600:five_prime_UTR 40.0%
GCCATGTTACCTTGATTTAC+TGG - tig0030761:18710-18729 None:intergenic 40.0%
! GGTGAAGCATTTCATCAAAC+GGG - tig0030761:18834-18853 None:intergenic 40.0%
! GGGTGAAGCATTTCATCAAA+CGG - tig0030761:18835-18854 None:intergenic 40.0%
GTGTGTTCAATGTTGGAGTT+AGG - tig0030761:18873-18892 None:intergenic 40.0%
AATCACCGTGTGTTCAATGT+TGG - tig0030761:18880-18899 None:intergenic 40.0%
AGATACTACACTGAATCTGG+TGG - tig0030761:18925-18944 None:intergenic 40.0%
GCAACAGATGAGTATAGGAA+TGG + tig0030761:19108-19127 Msa1444600:intron 40.0%
! CTTTCGGTGCAATGATTCAT+AGG + tig0030761:19151-19170 Msa1444600:five_prime_UTR 40.0%
AATCAGTTTAGGCAAGCTGA+AGG + tig0030761:19186-19205 Msa1444600:five_prime_UTR 40.0%
AATGAAGCAAGAAGATTGCG+AGG + tig0030761:19221-19240 Msa1444600:five_prime_UTR 40.0%
GGAGGAAAACCATGTGAAAA+AGG + tig0030761:19389-19408 Msa1444600:five_prime_UTR 40.0%
TTACAAGGAGATGCGAGAAA+AGG + tig0030761:19422-19441 Msa1444600:five_prime_UTR 40.0%
TACAAGGAGATGCGAGAAAA+GGG + tig0030761:19423-19442 Msa1444600:five_prime_UTR 40.0%
GCGCCTTGATCAAAATATTG+AGG - tig0030761:19470-19489 None:intergenic 40.0%
CATATGTATACGAATCAGGC+TGG - tig0030761:19560-19579 None:intergenic 40.0%
! CAGCCTGATTCGTATACATA+TGG + tig0030761:19558-19577 Msa1444600:five_prime_UTR 40.0%
AAAGGAACTGTTGGATGAGA+TGG + tig0030761:19626-19645 Msa1444600:five_prime_UTR 40.0%
TGGACATTCTTCACAAGCAA+TGG + tig0030761:19818-19837 Msa1444600:five_prime_UTR 40.0%
! AAGACGTCTTTTGCCTAACA+TGG + tig0030761:19863-19882 Msa1444600:five_prime_UTR 40.0%
AAGCTGTAGAGATTCTTGAC+AGG + tig0030761:19937-19956 Msa1444600:five_prime_UTR 40.0%
TAGAGATTCTTGACAGGATG+CGG + tig0030761:19943-19962 Msa1444600:five_prime_UTR 40.0%
ATGTACGGGAGAATCATAAG+CGG + tig0030761:19993-20012 Msa1444600:five_prime_UTR 40.0%
TTCATTGATGAGATGGCTCT+TGG + tig0030761:20053-20072 Msa1444600:five_prime_UTR 40.0%
ATGCATAACATGGTTGTCCA+AGG + tig0030761:20119-20138 Msa1444600:five_prime_UTR 40.0%
TACAATTGGAATGAGCGAGT+TGG - tig0030761:20164-20183 None:intergenic 40.0%
TGTATCTTAGCATGCGTACT+AGG + tig0030761:20180-20199 Msa1444600:five_prime_UTR 40.0%
GTATCTTAGCATGCGTACTA+GGG + tig0030761:20181-20200 Msa1444600:five_prime_UTR 40.0%
TATCTTAGCATGCGTACTAG+GGG + tig0030761:20182-20201 Msa1444600:five_prime_UTR 40.0%
!! GAATTCGAGTAGCTTTGTTC+AGG - tig0030761:20268-20287 None:intergenic 40.0%
GAACAAAGCTACTCGAATTC+TGG + tig0030761:20268-20287 Msa1444600:five_prime_UTR 40.0%
CTGGAGGAGATGATATTAGA+TGG + tig0030761:20287-20306 Msa1444600:five_prime_UTR 40.0%
GATATTAGATGGCTGCATTC+CGG + tig0030761:20298-20317 Msa1444600:five_prime_UTR 40.0%
!! TAATGTGTGGACTTTGGGAT+CGG + tig0030761:20342-20361 Msa1444600:five_prime_UTR 40.0%
!! AAGCAGAAGTTTGTTGAAGC+TGG + tig0030761:20407-20426 Msa1444600:five_prime_UTR 40.0%
!! AGCAGAAGTTTGTTGAAGCT+GGG + tig0030761:20408-20427 Msa1444600:five_prime_UTR 40.0%
AATGTGTGGACTTTCTCTGA+TGG + tig0030761:20458-20477 Msa1444600:five_prime_UTR 40.0%
!! GTAGATTTGCTGTGCGTAAT+TGG + tig0030761:20523-20542 Msa1444600:five_prime_UTR 40.0%
CCTAATTACTGGAACTGACA+AGG - tig0030761:20761-20780 None:intergenic 40.0%
CCTTGTCAGTTCCAGTAATT+AGG + tig0030761:20758-20777 Msa1444600:five_prime_UTR 40.0%
! TTTTGACACACCATGTCTGT+CGG + tig0030761:21038-21057 Msa1444600:five_prime_UTR 40.0%
! GAAAGCAAAGTAGTGGAAGA+TGG + tig0030761:21324-21343 Msa1444600:exon 40.0%
! AAAGTAGTGGAAGATGGGTT+TGG + tig0030761:21330-21349 Msa1444600:exon 40.0%
ACTCATATCCGAAGCATATG+AGG + tig0030761:21486-21505 Msa1444600:CDS 40.0%
ATACAGTCGGATGAAAACTG+AGG + tig0030761:21726-21745 Msa1444600:intron 40.0%
AAATAGCGCCACATTCAGAT+TGG - tig0030761:21839-21858 None:intergenic 40.0%
TTACATGGCACTCCTTACTT+AGG - tig0030761:21909-21928 None:intergenic 40.0%
ATGTAAGCATCATTGGTCCA+GGG + tig0030761:21923-21942 Msa1444600:intron 40.0%
CTCTTTGTCTATCCATGTTG+TGG + tig0030761:22216-22235 Msa1444600:intron 40.0%
CTTTGTCTATCCATGTTGTG+GGG + tig0030761:22218-22237 Msa1444600:intron 40.0%
CCATCATGAGTTTGGAAGTA+TGG - tig0030761:22405-22424 None:intergenic 40.0%
CCATACTTCCAAACTCATGA+TGG + tig0030761:22402-22421 Msa1444600:CDS 40.0%
AATATGCCATCTGCACTTCT+GGG - tig0030761:22447-22466 None:intergenic 40.0%
AAATATGCCATCTGCACTTC+TGG - tig0030761:22448-22467 None:intergenic 40.0%
!!! TTTGGCTTTTCAAGCCCTTA+TGG + tig0030761:22477-22496 Msa1444600:CDS 40.0%
TCATTCCCATTCCTCCATAA+GGG - tig0030761:22494-22513 None:intergenic 40.0%
TTATGGAGGAATGGGAATGA+GGG + tig0030761:22494-22513 Msa1444600:CDS 40.0%
GAAAATATCGCCAAAAGACC+TGG - tig0030761:22565-22584 None:intergenic 40.0%
AGGGAAATTGCATATGCAAG+TGG + tig0030761:22717-22736 Msa1444600:intron 40.0%
GGGAAATTGCATATGCAAGT+GGG + tig0030761:22718-22737 Msa1444600:intron 40.0%
TAGACACACATGAAAGGGAA+CGG - tig0030761:22991-23010 None:intergenic 40.0%
! TTTTGCTGCAAACACACATG+CGG - tig0030761:23041-23060 None:intergenic 40.0%
GGTTGTTCATTTCCTTTCTC+TGG - tig0030761:23136-23155 None:intergenic 40.0%
CACCTTCCAACTTACTACTT+TGG + tig0030761:23288-23307 Msa1444600:CDS 40.0%
GTCCATCCAAAGTAGTAAGT+TGG - tig0030761:23297-23316 None:intergenic 40.0%
CTGACCATTGCCATAGAAAA+TGG + tig0030761:23322-23341 Msa1444600:CDS 40.0%
TGATCCATCCTATGAAGAAG+TGG + tig0030761:23348-23367 Msa1444600:CDS 40.0%
TTCCAAGAATCCTTCACAGA+AGG + tig0030761:23393-23412 Msa1444600:CDS 40.0%
TCCAAGAATCCTTCACAGAA+GGG + tig0030761:23394-23413 Msa1444600:CDS 40.0%
CTAAGATTACCCTTCTGTGA+AGG - tig0030761:23406-23425 None:intergenic 40.0%
CTTCACAGAAGGGTAATCTT+AGG + tig0030761:23404-23423 Msa1444600:CDS 40.0%
ACACAAGATGCACTTGGTTA+TGG - tig0030761:23522-23541 None:intergenic 40.0%
CGTCACGATCACAACACTTT+CGG + tig0030761:19135-19154 Msa1444600:five_prime_UTR 45.0%
GCAAGAAGATTGCGAGGTTA+CGG + tig0030761:19227-19246 Msa1444600:five_prime_UTR 45.0%
GAAGTTATGGACGTGTGCAT+AGG + tig0030761:19274-19293 Msa1444600:five_prime_UTR 45.0%
AAAACCCTGATGGCATCAAG+TGG - tig0030761:19300-19319 None:intergenic 45.0%
GTAAGGTAAGACTTCTGCGT+CGG - tig0030761:19351-19370 None:intergenic 45.0%
GACGCAGAAGTCTTACCTTA+CGG + tig0030761:19350-19369 Msa1444600:five_prime_UTR 45.0%
TTGAGGGAAACAACACTTGG+TGG - tig0030761:19453-19472 None:intergenic 45.0%
TTTCGTGAAATGCCCAATCG+TGG + tig0030761:19531-19550 Msa1444600:five_prime_UTR 45.0%
TAGTCAGGCAAAGGAACTGT+TGG + tig0030761:19617-19636 Msa1444600:five_prime_UTR 45.0%
TTGGATGAGATGGAGGAGAA+AGG + tig0030761:19636-19655 Msa1444600:five_prime_UTR 45.0%
AAGGGTTGAAACCAGATGCA+GGG + tig0030761:19970-19989 Msa1444600:five_prime_UTR 45.0%
AAACCAGATGCAGGGATGTA+CGG + tig0030761:19978-19997 Msa1444600:five_prime_UTR 45.0%
ATTGATGAGATGGCTCTTGG+CGG + tig0030761:20056-20075 Msa1444600:five_prime_UTR 45.0%
TCTCACCTAATCGAGCAAGT+TGG + tig0030761:20081-20100 Msa1444600:five_prime_UTR 45.0%
! AAGCTCCAACTTGCTCGATT+AGG - tig0030761:20089-20108 None:intergenic 45.0%
!! AGGGGTATCTCTGTTGAGAT+TGG + tig0030761:20200-20219 Msa1444600:five_prime_UTR 45.0%
CAAAGCTACTCGAATTCTGG+AGG + tig0030761:20271-20290 Msa1444600:five_prime_UTR 45.0%
ACATTCCACATTCCCTCATC+CGG - tig0030761:20320-20339 None:intergenic 45.0%
TGGGATCGGAAAAAAGTTCG+AGG + tig0030761:20356-20375 Msa1444600:five_prime_UTR 45.0%
!! GATTTGCTGTGCGTAATTGG+AGG + tig0030761:20526-20545 Msa1444600:five_prime_UTR 45.0%
! AGAGTGTCTACAAACAGAGC+AGG - tig0030761:20568-20587 None:intergenic 45.0%
!!! GATTTTCCATGGTTCTAGCC+TGG + tig0030761:20644-20663 Msa1444600:five_prime_UTR 45.0%
GTATGTTTGCCTTATCCACC+AGG - tig0030761:20665-20684 None:intergenic 45.0%
!! CTTATCAGGGTGCCATTTCA+TGG - tig0030761:21428-21447 None:intergenic 45.0%
AAACTGAGGATCCCCTAAGA+AGG + tig0030761:21740-21759 Msa1444600:intron 45.0%
AACTGAGGATCCCCTAAGAA+GGG + tig0030761:21741-21760 Msa1444600:intron 45.0%
GAGTGCCATGTAAGCATCAT+TGG + tig0030761:21916-21935 Msa1444600:intron 45.0%
CTGGACCAATGATGCTTACA+TGG - tig0030761:21924-21943 None:intergenic 45.0%
CATGTAAGCATCATTGGTCC+AGG + tig0030761:21922-21941 Msa1444600:intron 45.0%
! GTTTTTCCATATACCACGGC+CGG - tig0030761:21957-21976 None:intergenic 45.0%
GTTGCACGTAGATGATACCT+TGG + tig0030761:22039-22058 Msa1444600:intron 45.0%
TCTATCCATGTTGTGGGGAA+TGG + tig0030761:22223-22242 Msa1444600:intron 45.0%
CTATCCATGTTGTGGGGAAT+GGG + tig0030761:22224-22243 Msa1444600:intron 45.0%
TATCCATGTTGTGGGGAATG+GGG + tig0030761:22225-22244 Msa1444600:intron 45.0%
TCCAAACTCATGATGGCAGA+AGG + tig0030761:22409-22428 Msa1444600:CDS 45.0%
ACCTTCTGCCATCATGAGTT+TGG - tig0030761:22413-22432 None:intergenic 45.0%
CTCATGATGGCAGAAGGTTT+AGG + tig0030761:22415-22434 Msa1444600:CDS 45.0%
! TTCAATCCCAGAAGTGCAGA+TGG + tig0030761:22438-22457 Msa1444600:CDS 45.0%
TTCAAGCCCTTATGGAGGAA+TGG + tig0030761:22485-22504 Msa1444600:CDS 45.0%
TCAAGCCCTTATGGAGGAAT+GGG + tig0030761:22486-22505 Msa1444600:CDS 45.0%
CTCATTCCCATTCCTCCATA+AGG - tig0030761:22495-22514 None:intergenic 45.0%
CTTATGGAGGAATGGGAATG+AGG + tig0030761:22493-22512 Msa1444600:CDS 45.0%
TATGGAGGAATGGGAATGAG+GGG + tig0030761:22495-22514 Msa1444600:CDS 45.0%
TAAATTGCCTTGCAGCCTTG+AGG + tig0030761:22656-22675 Msa1444600:CDS 45.0%
TAAAGTTCCTCAAGGCTGCA+AGG - tig0030761:22666-22685 None:intergenic 45.0%
AGACACACATGAAAGGGAAC+GGG - tig0030761:22990-23009 None:intergenic 45.0%
TTTGCTGCAAACACACATGC+GGG - tig0030761:23040-23059 None:intergenic 45.0%
TGCAGCAAAAACTGTACCTG+TGG + tig0030761:23051-23070 Msa1444600:intron 45.0%
AGCAAAAACTGTACCTGTGG+AGG + tig0030761:23054-23073 Msa1444600:intron 45.0%
CAATTGAAATCCAACCAGGC+TGG + tig0030761:23086-23105 Msa1444600:CDS 45.0%
AATCCAACCAGGCTGGAAAA+AGG + tig0030761:23093-23112 Msa1444600:CDS 45.0%
ATCCAACCAGGCTGGAAAAA+GGG + tig0030761:23094-23113 Msa1444600:CDS 45.0%
CTTACTACTTTGGATGGACG+AGG + tig0030761:23298-23317 Msa1444600:CDS 45.0%
GCAACCACTTCTTCATAGGA+TGG - tig0030761:23355-23374 None:intergenic 45.0%
TCCTATGAAGAAGTGGTTGC+CGG + tig0030761:23355-23374 Msa1444600:CDS 45.0%
ACCCTTCTGTGAAGGATTCT+TGG - tig0030761:23398-23417 None:intergenic 45.0%
CAACATCACATTCCCTAGCA+CGG + tig0030761:23435-23454 Msa1444600:CDS 45.0%
TTTCAGCATCAACCGTGCTA+GGG - tig0030761:23450-23469 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTGAAT+CGG - tig0030761:18487-18506 None:intergenic 5.0%
GATTGATCGCACGAGAATGC+AGG - tig0030761:18191-18210 None:intergenic 50.0%
!! GTGAACGGAAAGCGTTAGGA+TGG - tig0030761:18299-18318 None:intergenic 50.0%
!! TGTGGTGAACGGAAAGCGTT+AGG - tig0030761:18303-18322 None:intergenic 50.0%
GAGAGAGAACTGACCGACAT+CGG - tig0030761:18342-18361 None:intergenic 50.0%
AGAAGATTGCGAGGTTACGG+AGG + tig0030761:19230-19249 Msa1444600:five_prime_UTR 50.0%
ATAGGCCACTTGATGCCATC+AGG + tig0030761:19292-19311 Msa1444600:five_prime_UTR 50.0%
TAGGCCACTTGATGCCATCA+GGG + tig0030761:19293-19312 Msa1444600:five_prime_UTR 50.0%
GGAACTGTTGGATGAGATGG+AGG + tig0030761:19629-19648 Msa1444600:five_prime_UTR 50.0%
TTGACAGGATGCGGCTTCAA+GGG + tig0030761:19952-19971 Msa1444600:five_prime_UTR 50.0%
CAAGGGTTGAAACCAGATGC+AGG + tig0030761:19969-19988 Msa1444600:five_prime_UTR 50.0%
AACCAGATGCAGGGATGTAC+GGG + tig0030761:19979-19998 Msa1444600:five_prime_UTR 50.0%
GAAAGCTGCAAGCAGCACAA+AGG - tig0030761:20019-20038 None:intergenic 50.0%
AGGAGCTACTGAGCTATTGC+TGG + tig0030761:20376-20395 Msa1444600:five_prime_UTR 50.0%
!! TTTCCATGGTTCTAGCCTGG+TGG + tig0030761:20647-20666 Msa1444600:five_prime_UTR 50.0%
TATCCACCAGGCTAGAACCA+TGG - tig0030761:20653-20672 None:intergenic 50.0%
!! TGGTTCTAGCCTGGTGGATA+AGG + tig0030761:20653-20672 Msa1444600:five_prime_UTR 50.0%
! ACCATGTCTGTCGGTGTTTG+TGG + tig0030761:21047-21066 Msa1444600:five_prime_UTR 50.0%
TCCACAAACACCGACAGACA+TGG - tig0030761:21051-21070 None:intergenic 50.0%
TTGGTCCAGGGTTTGATCTC+CGG + tig0030761:21935-21954 Msa1444600:intron 50.0%
!! GGCTTTTCAAGCCCTTATGG+AGG + tig0030761:22480-22499 Msa1444600:CDS 50.0%
! TTCCCTTTTTCCAGCCTGGT+TGG - tig0030761:23099-23118 None:intergenic 50.0%
! TTCGTTCCCTTTTTCCAGCC+TGG - tig0030761:23103-23122 None:intergenic 50.0%
GGAAATTGGCATCCTTTCGC+CGG - tig0030761:23377-23396 None:intergenic 50.0%
GTTTCAGCATCAACCGTGCT+AGG - tig0030761:23451-23470 None:intergenic 50.0%
! CAAGGCGCTCTGCAAAAACG+AGG + tig0030761:19482-19501 Msa1444600:five_prime_UTR 55.0%
TCAGGCTGGCATCCACGATT+GGG - tig0030761:19546-19565 None:intergenic 55.0%
ATCAGGCTGGCATCCACGAT+TGG - tig0030761:19547-19566 None:intergenic 55.0%
CTTGACAGGATGCGGCTTCA+AGG + tig0030761:19951-19970 Msa1444600:five_prime_UTR 55.0%
AGATGGCTGCATTCCGGATG+AGG + tig0030761:20304-20323 Msa1444600:five_prime_UTR 55.0%
GATGGCTGCATTCCGGATGA+GGG + tig0030761:20305-20324 Msa1444600:five_prime_UTR 55.0%
GCATTCCGGATGAGGGAATG+TGG + tig0030761:20312-20331 Msa1444600:five_prime_UTR 55.0%
TGATCTCCGGCCGTGGTATA+TGG + tig0030761:21948-21967 Msa1444600:intron 55.0%
CATCCCCATTCCCCACAACA+TGG - tig0030761:22231-22250 None:intergenic 55.0%
! TCGTGGGTGTCCAGGTCTTT+TGG + tig0030761:22552-22571 Msa1444600:intron 55.0%
GAGTCAAGCTCCAAGACGCA+AGG + tig0030761:22617-22636 Msa1444600:CDS 55.0%
GTGGGTAAATGCTCTTCCCC+TGG + tig0030761:22736-22755 Msa1444600:intron 55.0%
GCCGGCAACCACTTCTTCAT+AGG - tig0030761:23359-23378 None:intergenic 55.0%
AAGAAGTGGTTGCCGGCGAA+AGG + tig0030761:23362-23381 Msa1444600:CDS 55.0%
CTCCCGTACATCCCTGCATC+TGG - tig0030761:19984-20003 None:intergenic 60.0%
GCTGCACTGTCACCTGCTGT+AGG - tig0030761:22381-22400 None:intergenic 60.0%
GGAGGAATGGGAATGAGGGG+CGG + tig0030761:22498-22517 Msa1444600:CDS 60.0%
! TGCAGAGGCATGGGCATGAG+AGG + tig0030761:22525-22544 Msa1444600:CDS 60.0%
TGGGCATGAGAGGTCAGTCG+TGG + tig0030761:22535-22554 Msa1444600:intron 60.0%
GGGCATGAGAGGTCAGTCGT+GGG + tig0030761:22536-22555 Msa1444600:intron 60.0%
!! ATGGGAGGTGCCTTGCGTCT+TGG - tig0030761:22630-22649 None:intergenic 60.0%
CACGGCCGGAGATCAAACCC+TGG - tig0030761:21943-21962 None:intergenic 65.0%
CAGGGTTTGATCTCCGGCCG+TGG + tig0030761:21941-21960 Msa1444600:intron 65.0%
GGAATGGGAATGAGGGGCGG+CGG + tig0030761:22501-22520 Msa1444600:CDS 65.0%
GAGGTCAGTCGTGGGTGTCC+AGG + tig0030761:22544-22563 Msa1444600:intron 65.0%
ATGAGGGGCGGCGGCTGCAG+AGG + tig0030761:22510-22529 Msa1444600:CDS 75.0%
! GGCGGCGGCTGCAGAGGCAT+GGG + tig0030761:22516-22535 Msa1444600:CDS 75.0%
! GGGCGGCGGCTGCAGAGGCA+TGG + tig0030761:22515-22534 Msa1444600:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0030761 gene 18169 23710 18169 ID=Msa1444600;Name=Msa1444600
tig0030761 mRNA 18169 23710 18169 ID=Msa1444600-mRNA-1;Parent=Msa1444600;Name=Msa1444600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=2490|0.6|0.66|1|0.2|0.16|6|224|336
tig0030761 exon 18169 18347 18169 ID=Msa1444600-mRNA-1:exon:14551;Parent=Msa1444600-mRNA-1
tig0030761 exon 18637 18719 18637 ID=Msa1444600-mRNA-1:exon:14552;Parent=Msa1444600-mRNA-1
tig0030761 exon 19115 21507 19115 ID=Msa1444600-mRNA-1:exon:14553;Parent=Msa1444600-mRNA-1
tig0030761 exon 22309 22553 22309 ID=Msa1444600-mRNA-1:exon:14554;Parent=Msa1444600-mRNA-1
tig0030761 exon 22566 22735 22566 ID=Msa1444600-mRNA-1:exon:14555;Parent=Msa1444600-mRNA-1
tig0030761 exon 23056 23710 23056 ID=Msa1444600-mRNA-1:exon:14556;Parent=Msa1444600-mRNA-1
tig0030761 five_prime_UTR 18169 18347 18169 ID=Msa1444600-mRNA-1:five_prime_utr;Parent=Msa1444600-mRNA-1
tig0030761 five_prime_UTR 18637 18719 18637 ID=Msa1444600-mRNA-1:five_prime_utr;Parent=Msa1444600-mRNA-1
tig0030761 five_prime_UTR 19115 21342 19115 ID=Msa1444600-mRNA-1:five_prime_utr;Parent=Msa1444600-mRNA-1
tig0030761 CDS 21343 21507 21343 ID=Msa1444600-mRNA-1:cds;Parent=Msa1444600-mRNA-1
tig0030761 CDS 22309 22553 22309 ID=Msa1444600-mRNA-1:cds;Parent=Msa1444600-mRNA-1
tig0030761 CDS 22566 22735 22566 ID=Msa1444600-mRNA-1:cds;Parent=Msa1444600-mRNA-1
tig0030761 CDS 23056 23486 23056 ID=Msa1444600-mRNA-1:cds;Parent=Msa1444600-mRNA-1
tig0030761 three_prime_UTR 23487 23710 23487 ID=Msa1444600-mRNA-1:three_prime_utr;Parent=Msa1444600-mRNA-1
Gene Sequence

>Msa1444600

ATGGGTTTGGATTACTATGAGATTTTGGAGGTTGACAAGAATGCTACAGATGATGAGTTGAAGAAAGCATATAGAAAACTTGCCATGAAATGGCACCCTGATAAGAATCCTGACAATAAGAATGATGCTGAGACTAAATTCAAACTCATATCCGAAGCATATGAGGTTCTAAGTGATCCGCAAAAGAGAGCAATTTATGATCAGTATGAAGAAAGCAGCCTTAAAAATGAAATGCCTACAGCAGGTGACAGTGCAGCTCCATACTTCCAAACTCATGATGGCAGAAGGTTTAGGTTCAATCCCAGAAGTGCAGATGGCATATTTGCAGAAGTTTTTGGCTTTTCAAGCCCTTATGGAGGAATGGGAATGAGGGGCGGCGGCTGCAGAGGCATGGGCATGAGAGGTCAGTCGTCTTTTGGCGATATTTTCGGCAAAGATGTATTTGGAGAAAGCAGACAAACGAGTCAAGCTCCAAGACGCAAGGCACCTCCCATTGAAAATAAATTGCCTTGCAGCCTTGAGGAACTTTATAAAGGTACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCATATGCAACAAAAACTGTACCTGTGGAGGAAATACTAACAATTGAAATCCAACCAGGCTGGAAAAAGGGAACGAAAATCACTTTCCCAGAGAAAGGAAATGAACAACCAAATGTCATTGCTGCAGATATCGTATTCATTATTGACGAGAAACCTCACAATGTATTTACAAGACAAGGTAATGATTTGGTTATGACACAAAAGATATTACTTGCAGAAGGAGAAGCTCTAAGCAGAAGCTACACCTTCCAACTTACTACTTTGGATGGACGAGGTCTGACCATTGCCATAGAAAATGGAATTGATCCATCCTATGAAGAAGTGGTTGCCGGCGAAAGGATGCCAATTTCCAAGAATCCTTCACAGAAGGGTAATCTTAGGATCAAATTCAACATCACATTCCCTAGCACGGTTGATGCTGAAACAGAAAGCCAGAACTAA
Protein sequence

>Msa1444600

MGLDYYEILEVDKNATDDELKKAYRKLAMKWHPDKNPDNKNDAETKFKLISEAYEVLSDPQKRAIYDQYEESSLKNEMPTAGDSAAPYFQTHDGRRFRFNPRSADGIFAEVFGFSSPYGGMGMRGGGCRGMGMRGQSSFGDIFGKDVFGESRQTSQAPRRKAPPIENKLPCSLEELYKGTTKKMKISREIAYATKTVPVEEILTIEIQPGWKKGTKITFPEKGNEQPNVIAADIVFIIDEKPHNVFTRQGNDLVMTQKILLAEGEALSRSYTFQLTTLDGRGLTIAIENGIDPSYEEVVAGERMPISKNPSQKGNLRIKFNITFPSTVDAETESQN*