Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444610 | sp|F4HY56|RLT1_ARATH | 41.890 | 931 | 327 | 26 | 6 | 748 | 636 | 1540 | 4.72e-176 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444610 | G7ISG2 | 71.779 | 1141 | 86 | 13 | 6 | 911 | 657 | 1796 | 0.0 | 1519 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0720170 | Msa1444610 | 0.846960 | 1.563977e-59 | -8.615850e-47 |
| Msa0769930 | Msa1444610 | 0.869349 | 3.308679e-66 | -8.615850e-47 |
| Msa0803000 | Msa1444610 | 0.968029 | 4.233944e-128 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444610 | MtrunA17_Chr2g0282771 | 71.691 | 1141 | 86 | 14 | 6 | 911 | 657 | 1795 | 0.0 | 1512 |
| Msa1444610 | MtrunA17_Chr4g0046591 | 53.632 | 1115 | 278 | 19 | 6 | 896 | 604 | 1703 | 0.0 | 944 |
| Msa1444610 | MtrunA17_Chr4g0040511 | 35.417 | 1008 | 375 | 24 | 6 | 758 | 634 | 1620 | 2.14e-160 | 513 |
| Msa1444610 | MtrunA17_Chr8g0389091 | 27.519 | 665 | 353 | 23 | 13 | 600 | 447 | 1059 | 2.40e-41 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444610 | AT1G28420.1 | 41.890 | 931 | 327 | 26 | 6 | 748 | 636 | 1540 | 4.79e-177 | 557 |
| Msa1444610 | AT5G44180.3 | 40.241 | 830 | 299 | 15 | 6 | 644 | 601 | 1424 | 4.78e-159 | 508 |
| Msa1444610 | AT5G44180.1 | 40.241 | 830 | 299 | 15 | 6 | 644 | 601 | 1424 | 4.78e-159 | 508 |
| Msa1444610 | AT5G44180.2 | 44.762 | 525 | 166 | 10 | 6 | 412 | 601 | 1119 | 2.94e-110 | 372 |
| Msa1444610 | AT5G44180.2 | 41.176 | 119 | 44 | 1 | 552 | 644 | 1119 | 1237 | 4.57e-17 | 87.4 |
| Msa1444610 | AT4G12750.1 | 27.052 | 658 | 355 | 22 | 18 | 600 | 443 | 1050 | 5.08e-40 | 160 |
Find 202 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGTATTGTTCTGAATTT+TGG | 0.128459 | tig0030761:+28054 | None:intergenic |
| TACACCACTTTACGGGAATT+TGG | 0.151244 | tig0030761:+26381 | None:intergenic |
| CTGAAGCATTCGAAACAATT+TGG | 0.198465 | tig0030761:-25886 | Msa1444610:CDS |
| AAAATCCAGATATTTGAAAA+TGG | 0.211386 | tig0030761:-28188 | Msa1444610:CDS |
| TGGAATATGATCATGGAAAT+TGG | 0.222823 | tig0030761:-24738 | Msa1444610:CDS |
| GCTAACTGTCGCAAAATTTC+AGG | 0.237197 | tig0030761:+28949 | None:intergenic |
| CTATGACTCCTGTTCACATT+GGG | 0.295937 | tig0030761:-24873 | Msa1444610:CDS |
| CGATAATATGAATATTAGTT+TGG | 0.298203 | tig0030761:-28036 | Msa1444610:intron |
| CTTGTCAGAAATCTGGTCTT+CGG | 0.300420 | tig0030761:-28370 | Msa1444610:intron |
| GAAATCTAAATATAATAATA+TGG | 0.304182 | tig0030761:-27875 | Msa1444610:CDS |
| CAATGGTTCTCTTCCACCCT+TGG | 0.311820 | tig0030761:+24936 | None:intergenic |
| GTTGCTTCTTTCTCCTCAAC+AGG | 0.312467 | tig0030761:+25445 | None:intergenic |
| GGGGCTTTGACATACGAAAT+TGG | 0.313114 | tig0030761:-28999 | Msa1444610:CDS |
| CTCTAGTACATTCAAACCTT+TGG | 0.314270 | tig0030761:+28481 | None:intergenic |
| GTGCAGAAGGAGTTCCTCTT+TGG | 0.318500 | tig0030761:+27392 | None:intergenic |
| CTCAAGCTTTACGTAGTTGA+TGG | 0.322653 | tig0030761:+25477 | None:intergenic |
| TTAGATTTCCCATCACTTGC+TGG | 0.328353 | tig0030761:-27529 | Msa1444610:CDS |
| TTAGCACTATCTGCAGGATT+TGG | 0.331449 | tig0030761:-28931 | Msa1444610:CDS |
| TCTAGTACATTCAAACCTTT+GGG | 0.336654 | tig0030761:+28482 | None:intergenic |
| CTTTCTTGCTTCTGAAAGAA+TGG | 0.337761 | tig0030761:+28211 | None:intergenic |
| TACAATTCCAAACAAGATAT+TGG | 0.339271 | tig0030761:-25126 | Msa1444610:CDS |
| TGATGCTTCAGGTGTCTTGC+TGG | 0.339404 | tig0030761:+28337 | None:intergenic |
| AAATCCCTATCCCATCTGTT+AGG | 0.342001 | tig0030761:+24691 | None:intergenic |
| CACTGGATTCACGCGGGATC+AGG | 0.342944 | tig0030761:-26812 | Msa1444610:CDS |
| ATCGGTTACGCCTGCGGTCC+TGG | 0.348401 | tig0030761:+27203 | None:intergenic |
| TCGACGGCCAATATCTTGTT+TGG | 0.349356 | tig0030761:+25119 | None:intergenic |
| TAACAGATGGGATAGGGATT+TGG | 0.350231 | tig0030761:-24689 | Msa1444610:CDS |
| TGGGAGTCTTCCATAAAATA+AGG | 0.365324 | tig0030761:+26567 | None:intergenic |
| TCTAGTAATGATCCTGGTTC+TGG | 0.366872 | tig0030761:-27157 | Msa1444610:CDS |
| ACCGCAGGCGTAACCGATAT+TGG | 0.370287 | tig0030761:-27198 | Msa1444610:CDS |
| CAGGTGTCTTGCTGGTTGTC+AGG | 0.370707 | tig0030761:+28345 | None:intergenic |
| TTTACCAAATCATCGTCTTC+AGG | 0.370784 | tig0030761:+28092 | None:intergenic |
| AACTGTTTCTCAGGATAGAT+TGG | 0.374927 | tig0030761:-27635 | Msa1444610:intron |
| TTGTCAGAAATCTGGTCTTC+GGG | 0.377803 | tig0030761:-28369 | Msa1444610:intron |
| TGAGCCACTACACCACTTTA+CGG | 0.382017 | tig0030761:+26373 | None:intergenic |
| GACACCTGAAGCATCAATTT+CGG | 0.383323 | tig0030761:-28330 | Msa1444610:CDS |
| AAATTCTCTGTTAGGCTTGA+AGG | 0.387266 | tig0030761:+25281 | None:intergenic |
| TACGCCTGCGGTCCTGGCCA+AGG | 0.390990 | tig0030761:+27209 | None:intergenic |
| ATCAGTGGCGGAGCCCTTCA+TGG | 0.392878 | tig0030761:-26509 | Msa1444610:CDS |
| GGATCCTGAAGACGATGATT+TGG | 0.395309 | tig0030761:-28096 | Msa1444610:CDS |
| TATTGGCCGTCGAAACATTA+AGG | 0.399527 | tig0030761:-25109 | Msa1444610:CDS |
| CTCTTTCTTGAGGGCCCCAA+AGG | 0.401420 | tig0030761:-28497 | Msa1444610:intron |
| AGAGCTTGCAGAGAAGATTC+AGG | 0.403864 | tig0030761:-28462 | Msa1444610:intron |
| TAATTTCTGACTTAGATTCT+CGG | 0.403941 | tig0030761:+25083 | None:intergenic |
| TACCCCTTGGCCAGGACCGC+AGG | 0.404528 | tig0030761:-27213 | Msa1444610:CDS |
| GATCATGGAAATTGGGAGAT+AGG | 0.409401 | tig0030761:-24730 | Msa1444610:CDS |
| AAATCCAGATATTTGAAAAT+GGG | 0.416183 | tig0030761:-28187 | Msa1444610:CDS |
| GCAACCGAAATTGATGCTTC+AGG | 0.423831 | tig0030761:+28326 | None:intergenic |
| CTGAATAGAGTAGTGAATGT+AGG | 0.424161 | tig0030761:-24565 | Msa1444610:CDS |
| CAAGCCTAACAGAGAATTTG+AGG | 0.425911 | tig0030761:-25277 | Msa1444610:CDS |
| GAGCCACTACACCACTTTAC+GGG | 0.430906 | tig0030761:+26374 | None:intergenic |
| CTCTACAACAGACGAATTGT+TGG | 0.431310 | tig0030761:-25625 | Msa1444610:CDS |
| ACATCAATATTAACAACATT+AGG | 0.432077 | tig0030761:-27444 | Msa1444610:CDS |
| GGAATATGATCATGGAAATT+GGG | 0.434917 | tig0030761:-24737 | Msa1444610:CDS |
| TCTACAACAGACGAATTGTT+GGG | 0.435097 | tig0030761:-25624 | Msa1444610:CDS |
| GAAATCGATGAAAGCAAGTC+TGG | 0.440423 | tig0030761:-27853 | Msa1444610:CDS |
| AATCCCTATCCCATCTGTTA+GGG | 0.444940 | tig0030761:+24692 | None:intergenic |
| GTCATTTCTACACTTCGTAA+TGG | 0.445805 | tig0030761:-28628 | Msa1444610:CDS |
| ATGCAACAAACTGCCAATAT+CGG | 0.446056 | tig0030761:+27185 | None:intergenic |
| TTTAGATTTCCACAAGCAAC+TGG | 0.446414 | tig0030761:+27888 | None:intergenic |
| GAAATTAAAACAGCAGGGAC+AGG | 0.447944 | tig0030761:-25067 | Msa1444610:CDS |
| AGCTGTTGAAGATTTGTTGC+TGG | 0.448006 | tig0030761:-24983 | Msa1444610:CDS |
| GATCATTTGACGGAAATGTT+TGG | 0.451918 | tig0030761:+26529 | None:intergenic |
| TGAGAAACTTGGATGAAGAA+TGG | 0.452058 | tig0030761:-24915 | Msa1444610:CDS |
| ACAGGGAACACAAGGACAAG+GGG | 0.454229 | tig0030761:-25049 | Msa1444610:CDS |
| AACGCTCTTGTTGCATTGGT+TGG | 0.455023 | tig0030761:-27766 | Msa1444610:CDS |
| GCTGCCTCAAATTCTCTGTT+AGG | 0.455149 | tig0030761:+25273 | None:intergenic |
| TGACGGAAATGTTTGGTGGC+AGG | 0.456417 | tig0030761:+26536 | None:intergenic |
| CTTTGATTTCCCTCCACAGC+AGG | 0.456515 | tig0030761:+27478 | None:intergenic |
| TCTGGAGAACCATGGGTTCA+AGG | 0.457333 | tig0030761:-27835 | Msa1444610:CDS |
| AGATGTTATGAGTGAAGGTT+CGG | 0.457471 | tig0030761:-24596 | Msa1444610:CDS |
| ACCATGGGTTCAAGGACTTA+CGG | 0.459012 | tig0030761:-27827 | Msa1444610:CDS |
| CCAATGTGAACAGGAGTCAT+AGG | 0.460889 | tig0030761:+24874 | None:intergenic |
| CTCTTCTTTATCATTTGCAC+AGG | 0.461315 | tig0030761:+28876 | None:intergenic |
| ATTAGCAGAAGGTTTAACTT+TGG | 0.465048 | tig0030761:+25227 | None:intergenic |
| GGGCGAGGAGCTAGTGATCT+TGG | 0.465938 | tig0030761:-25177 | Msa1444610:CDS |
| TCAGCAACCCCAATGTGAAC+AGG | 0.466771 | tig0030761:+24865 | None:intergenic |
| TCTTCATCCAAGTTTCTCAA+TGG | 0.468649 | tig0030761:+24919 | None:intergenic |
| TAATATTGATGTCGAGCAAT+GGG | 0.469453 | tig0030761:+27455 | None:intergenic |
| TTTGAAAATGGGTTTCTAGC+TGG | 0.474564 | tig0030761:-28176 | Msa1444610:CDS |
| ACGCCTGCGGTCCTGGCCAA+GGG | 0.484182 | tig0030761:+27210 | None:intergenic |
| TCTAAACGCTCTTGTTGCAT+TGG | 0.487462 | tig0030761:-27770 | Msa1444610:CDS |
| TGAATAGAGTAGTGAATGTA+GGG | 0.488159 | tig0030761:-24564 | Msa1444610:CDS |
| AAGAGAACCATTGAGAAACT+TGG | 0.488491 | tig0030761:-24926 | Msa1444610:CDS |
| GTTCGTACACGATATGTTGA+TGG | 0.491663 | tig0030761:+28266 | None:intergenic |
| CCTATGACTCCTGTTCACAT+TGG | 0.492058 | tig0030761:-24874 | Msa1444610:CDS |
| TCGGTTGCTTTGACAAGAGA+TGG | 0.494544 | tig0030761:-28311 | Msa1444610:CDS |
| GAGAAACTTGGATGAAGAAT+GGG | 0.494611 | tig0030761:-24914 | Msa1444610:CDS |
| AATTCTCTGTTAGGCTTGAA+GGG | 0.496793 | tig0030761:+25282 | None:intergenic |
| AAGTCAGAAATTAAAACAGC+AGG | 0.497648 | tig0030761:-25073 | Msa1444610:CDS |
| TTCAATCCGCATTATTCTTG+AGG | 0.502637 | tig0030761:-27725 | Msa1444610:intron |
| TCCACCCTTGGAACTATGAC+TGG | 0.504696 | tig0030761:+24948 | None:intergenic |
| GCTAATAAAATTGCACGAAG+TGG | 0.504989 | tig0030761:-25210 | Msa1444610:CDS |
| CGACAGTTAGCACTATCTGC+AGG | 0.505764 | tig0030761:-28937 | Msa1444610:CDS |
| ATTTATTTCCAGCAAGTGAT+GGG | 0.509213 | tig0030761:+27521 | None:intergenic |
| CAGCAGGGACAGGGAACACA+AGG | 0.510675 | tig0030761:-25057 | Msa1444610:CDS |
| AACTATGACTGGCTGCTGCA+TGG | 0.513290 | tig0030761:+24959 | None:intergenic |
| AGATGGGATAGGGATTTGGT+TGG | 0.513510 | tig0030761:-24685 | Msa1444610:CDS |
| TGGCCCACCTCAGCCCATGA+AGG | 0.514616 | tig0030761:+26495 | None:intergenic |
| GCGGAGCCCTTCATGGGCTG+AGG | 0.522289 | tig0030761:-26502 | Msa1444610:intron |
| TCCGTAAGTCCTTGAACCCA+TGG | 0.523687 | tig0030761:+27826 | None:intergenic |
| TGTGCAAATTTACCGCGTAA+AGG | 0.526783 | tig0030761:+26253 | None:intergenic |
| AGGAGCTAGTGATCTTGGAC+GGG | 0.526845 | tig0030761:-25172 | Msa1444610:CDS |
| GTCTACAGGTCTCTACCCCT+TGG | 0.527484 | tig0030761:-27226 | Msa1444610:intron |
| TTGAAGGGAGTATATCTTGA+TGG | 0.527833 | tig0030761:+25297 | None:intergenic |
| TCTCCCCTAACAGATGGGAT+AGG | 0.529720 | tig0030761:-24696 | Msa1444610:CDS |
| AGAATGGACTCAGCATCTGC+AGG | 0.531873 | tig0030761:+28227 | None:intergenic |
| ACAATGATCCTGCCAGAACC+AGG | 0.531936 | tig0030761:+27145 | None:intergenic |
| AATTTATTTCCAGCAAGTGA+TGG | 0.534389 | tig0030761:+27520 | None:intergenic |
| CTCCCCTAACAGATGGGATA+GGG | 0.534441 | tig0030761:-24695 | Msa1444610:CDS |
| CTCCGCCACTGATCATTTGA+CGG | 0.536137 | tig0030761:+26519 | None:intergenic |
| AACATCATGATGGCAGTTGG+AGG | 0.538714 | tig0030761:-27120 | Msa1444610:CDS |
| GCTGTTGAAGATTTGTTGCT+GGG | 0.539538 | tig0030761:-24982 | Msa1444610:CDS |
| GGCCCACCTCAGCCCATGAA+GGG | 0.540663 | tig0030761:+26496 | None:intergenic |
| TTCACTCATAACATCTTCCT+CGG | 0.541196 | tig0030761:+24603 | None:intergenic |
| GTAATGATCCTGGTTCTGGC+AGG | 0.541880 | tig0030761:-27153 | Msa1444610:CDS |
| TAGTAACAGTGCTGAAGAGG+TGG | 0.542177 | tig0030761:-24839 | Msa1444610:CDS |
| AGATGAAGAAGACAATGAAG+AGG | 0.542565 | tig0030761:-24632 | Msa1444610:CDS |
| GGACAGGGAACACAAGGACA+AGG | 0.543077 | tig0030761:-25051 | Msa1444610:CDS |
| GCCAATATCGGTTACGCCTG+CGG | 0.543579 | tig0030761:+27197 | None:intergenic |
| CACTGCTTGAGCATCATCAT+CGG | 0.546864 | tig0030761:+24759 | None:intergenic |
| TCTGCTTCTAGTAATGATCC+TGG | 0.547326 | tig0030761:-27163 | Msa1444610:CDS |
| CAGGTCTCTACCCCTTGGCC+AGG | 0.550807 | tig0030761:-27221 | Msa1444610:CDS |
| TGAGAGACTTGAGCCTGTTG+AGG | 0.551060 | tig0030761:-25458 | Msa1444610:CDS |
| ACTGGATTCACGCGGGATCA+GGG | 0.551277 | tig0030761:-26811 | Msa1444610:CDS |
| TTGAACATCATGATGGCAGT+TGG | 0.551530 | tig0030761:-27123 | Msa1444610:CDS |
| CACTGCTTGAACATCATCAT+CGG | 0.552430 | tig0030761:+24786 | None:intergenic |
| TATGACTCCTGTTCACATTG+GGG | 0.553796 | tig0030761:-24872 | Msa1444610:CDS |
| TCAGTGGCGGAGCCCTTCAT+GGG | 0.556045 | tig0030761:-26508 | Msa1444610:CDS |
| CAAGCAGTGGAATATGATCA+TGG | 0.556622 | tig0030761:-24745 | Msa1444610:CDS |
| CGGTGACCTTAATGTTTCGA+CGG | 0.557107 | tig0030761:+25103 | None:intergenic |
| GAATAGTAACAGTGCTGAAG+AGG | 0.557689 | tig0030761:-24842 | Msa1444610:CDS |
| TTAATATTGATGTCGAGCAA+TGG | 0.557741 | tig0030761:+27454 | None:intergenic |
| GAGGAGCTAGTGATCTTGGA+CGG | 0.557903 | tig0030761:-25173 | Msa1444610:CDS |
| ACCAGACAACCAGTTGCTTG+TGG | 0.562836 | tig0030761:-27897 | Msa1444610:intron |
| CAATAAGTAGACTGTGCAGA+AGG | 0.564930 | tig0030761:+27379 | None:intergenic |
| TGATCCAAATTCCCGTAAAG+TGG | 0.566337 | tig0030761:-26385 | Msa1444610:intron |
| CGGTGTCTCCCCTAACAGAT+GGG | 0.568914 | tig0030761:-24701 | Msa1444610:CDS |
| GCAGCAGCTCTTGATCATGA+TGG | 0.570686 | tig0030761:-25255 | Msa1444610:CDS |
| TGTACGAACTGCATTTAGAC+AGG | 0.572915 | tig0030761:-28252 | Msa1444610:CDS |
| ACGGTGTCTCCCCTAACAGA+TGG | 0.573565 | tig0030761:-24702 | Msa1444610:CDS |
| CAGGGAACACAAGGACAAGG+GGG | 0.575472 | tig0030761:-25048 | Msa1444610:CDS |
| TTTATGTGCAATAAAATTTG+GGG | 0.580757 | tig0030761:-26637 | Msa1444610:CDS |
| GACAGGGAACACAAGGACAA+GGG | 0.581330 | tig0030761:-25050 | Msa1444610:CDS |
| GAGGCTTATTGATTCTGAAG+AGG | 0.583561 | tig0030761:-27101 | Msa1444610:intron |
| AAAGAGATGCAAACCTCAGG+TGG | 0.585260 | tig0030761:-26613 | Msa1444610:CDS |
| GTTATGAGTGAAGGTTCGGA+TGG | 0.585945 | tig0030761:-24592 | Msa1444610:CDS |
| GATTTGGTAAATCCTTCAAG+TGG | 0.586869 | tig0030761:-28080 | Msa1444610:CDS |
| TGATGTCAAAAGAATATCAA+AGG | 0.588563 | tig0030761:+26833 | None:intergenic |
| AGCAGCCAGTCATAGTTCCA+AGG | 0.589263 | tig0030761:-24953 | Msa1444610:CDS |
| CGATGATGATGTTCAAGCAG+TGG | 0.590938 | tig0030761:-24785 | Msa1444610:CDS |
| AGTGGAAACAAACGTGGGCG+AGG | 0.591012 | tig0030761:-25192 | Msa1444610:CDS |
| TTATGCTAGGCATATACATG+GGG | 0.591960 | tig0030761:-29018 | Msa1444610:intron |
| GAGGAAGATGTTATGAGTGA+AGG | 0.593223 | tig0030761:-24601 | Msa1444610:CDS |
| ATCATTGTTGAACATCATGA+TGG | 0.594733 | tig0030761:-27130 | Msa1444610:CDS |
| TCTTGTTGCATTGGTTGGTG+TGG | 0.597711 | tig0030761:-27761 | Msa1444610:CDS |
| TTGGTTGGTGTGGCAAATGA+AGG | 0.598262 | tig0030761:-27751 | Msa1444610:CDS |
| CATTTGACGGAAATGTTTGG+TGG | 0.599076 | tig0030761:+26532 | None:intergenic |
| AAGCAAGTCTGGAGAACCAT+GGG | 0.599961 | tig0030761:-27842 | Msa1444610:CDS |
| CAATGAAGAGGAAGATTCCG+AGG | 0.601580 | tig0030761:-24620 | Msa1444610:CDS |
| GCCAGTCATAGTTCCAAGGG+TGG | 0.602421 | tig0030761:-24949 | Msa1444610:CDS |
| AGAAAGTGATGAAGTTGATG+AGG | 0.602540 | tig0030761:-28117 | Msa1444610:CDS |
| GGTAAAGAGATGCAAACCTC+AGG | 0.602721 | tig0030761:-26616 | Msa1444610:CDS |
| AGTCAGAAATTAAAACAGCA+GGG | 0.604689 | tig0030761:-25072 | Msa1444610:CDS |
| TTTATGCTAGGCATATACAT+GGG | 0.605628 | tig0030761:-29019 | Msa1444610:intron |
| TGAAAACTGAAGCTGATGAG+TGG | 0.606310 | tig0030761:-26683 | Msa1444610:CDS |
| CGCCTGCGGTCCTGGCCAAG+GGG | 0.612330 | tig0030761:+27211 | None:intergenic |
| GGGTGGACGAGGTCGCCGAA+CGG | 0.612585 | tig0030761:-25028 | Msa1444610:CDS |
| GACACATATCCTGCTGTGGA+GGG | 0.615224 | tig0030761:-27487 | Msa1444610:CDS |
| AAATTAAAACAGCAGGGACA+GGG | 0.615318 | tig0030761:-25066 | Msa1444610:CDS |
| CGATGATGATGCTCAAGCAG+TGG | 0.616148 | tig0030761:-24758 | Msa1444610:CDS |
| GCAGCCAGTCATAGTTCCAA+GGG | 0.618569 | tig0030761:-24952 | Msa1444610:CDS |
| CTGTGCAAATGATAAAGAAG+AGG | 0.619387 | tig0030761:-28875 | Msa1444610:intron |
| AGACACATATCCTGCTGTGG+AGG | 0.621953 | tig0030761:-27488 | Msa1444610:CDS |
| AATTCACCTCAAGAATAATG+CGG | 0.623958 | tig0030761:+27719 | None:intergenic |
| TTCCGTCAAATGATCAGTGG+CGG | 0.629248 | tig0030761:-26521 | Msa1444610:CDS |
| TGATGATAATGCTCAAGCAG+TGG | 0.630034 | tig0030761:-24812 | Msa1444610:CDS |
| GTTGAGTAAATCATCATCCG+TGG | 0.630562 | tig0030761:-25831 | Msa1444610:CDS |
| TTCAGCAGCCGTAAGTGCAG+TGG | 0.630745 | tig0030761:-28605 | Msa1444610:CDS |
| ATCACTGCAGAAAACCAAAG+AGG | 0.635491 | tig0030761:-27406 | Msa1444610:CDS |
| TGGAATGAGTGATGAAGATG+TGG | 0.636934 | tig0030761:-24665 | Msa1444610:CDS |
| AACCTGTAAAAGTTCCTCCA+CGG | 0.643423 | tig0030761:+25814 | None:intergenic |
| GCACGAAGTGGAAACAAACG+TGG | 0.646195 | tig0030761:-25198 | Msa1444610:CDS |
| ATCCCTATCCCATCTGTTAG+GGG | 0.647687 | tig0030761:+24693 | None:intergenic |
| AAAGCAAGTCTGGAGAACCA+TGG | 0.650686 | tig0030761:-27843 | Msa1444610:CDS |
| CATTTCCGTCAAATGATCAG+TGG | 0.657846 | tig0030761:-26524 | Msa1444610:CDS |
| TTGGTGGCAGGAATTGCAGT+GGG | 0.660429 | tig0030761:+26548 | None:intergenic |
| GGAGCTAGTGATCTTGGACG+GGG | 0.663804 | tig0030761:-25171 | Msa1444610:CDS |
| ATTTCACAAATATCCACCTG+AGG | 0.663951 | tig0030761:+26600 | None:intergenic |
| ACAAGACACATATCCTGCTG+TGG | 0.665387 | tig0030761:-27491 | Msa1444610:CDS |
| TGGGTTCAAGGACTTACGGA+AGG | 0.666684 | tig0030761:-27823 | Msa1444610:CDS |
| AGAACTTGAATCAATTGACA+TGG | 0.673684 | tig0030761:-28972 | Msa1444610:CDS |
| CTAGTACATTCAAACCTTTG+GGG | 0.684269 | tig0030761:+28483 | None:intergenic |
| TGACATCACTGGATTCACGC+GGG | 0.684391 | tig0030761:-26818 | Msa1444610:CDS |
| GAGTAAATCATCATCCGTGG+AGG | 0.687342 | tig0030761:-25828 | Msa1444610:CDS |
| TTGACATCACTGGATTCACG+CGG | 0.692134 | tig0030761:-26819 | Msa1444610:CDS |
| AATAGAGTAGTGAATGTAGG+GGG | 0.694338 | tig0030761:-24562 | Msa1444610:CDS |
| GAATAGAGTAGTGAATGTAG+GGG | 0.704575 | tig0030761:-24563 | Msa1444610:CDS |
| AACACTAAAACTCCTTTACG+CGG | 0.716438 | tig0030761:-26265 | Msa1444610:intron |
| TTTGGTGGCAGGAATTGCAG+TGG | 0.721001 | tig0030761:+26547 | None:intergenic |
| CACGAAGTGGAAACAAACGT+GGG | 0.731398 | tig0030761:-25197 | Msa1444610:CDS |
| AATTGGGAGATAGGTTACAA+CGG | 0.732052 | tig0030761:-24721 | Msa1444610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATCTAAATATAATAATA+TGG | - | tig0030761:26551-26570 | Msa1444610:CDS | 10.0% |
| !! | TTTAAATTTACAAAAAGATT+AGG | + | tig0030761:28434-28453 | None:intergenic | 10.0% |
| !! | TTTGATTACGATTAAAAAAA+AGG | + | tig0030761:24677-24696 | None:intergenic | 15.0% |
| !!! | ACTTATTTTATCTTTTGTTA+TGG | - | tig0030761:25018-25037 | Msa1444610:CDS | 15.0% |
| !! | GTAAATGTAAAAGAAAATTT+GGG | - | tig0030761:26412-26431 | Msa1444610:intron | 15.0% |
| !! | AATACACAATATACAAAAAT+TGG | - | tig0030761:27700-27719 | Msa1444610:intron | 15.0% |
| !!! | ATTTTATGTGCAATAAAATT+TGG | - | tig0030761:27787-27806 | Msa1444610:CDS | 15.0% |
| !!! | TTTTATGTGCAATAAAATTT+GGG | - | tig0030761:27788-27807 | Msa1444610:CDS | 15.0% |
| !!! | TCGTTGATTTTTTAATTTTT+GGG | + | tig0030761:27965-27984 | None:intergenic | 15.0% |
| !!! | ATCGTTGATTTTTTAATTTT+TGG | + | tig0030761:27966-27985 | None:intergenic | 15.0% |
| !!! | GATTTTATACAATTTTATGT+CGG | - | tig0030761:28118-28137 | Msa1444610:CDS | 15.0% |
| !! | TGAATGGATAAAAAATAATT+TGG | - | tig0030761:28213-28232 | Msa1444610:CDS | 15.0% |
| !! | TCAAAGGTAAAAATAATAAT+AGG | + | tig0030761:28472-28491 | None:intergenic | 15.0% |
| !!! | AAATTTTCATCATAATCTAA+TGG | - | tig0030761:29072-29091 | Msa1444610:intron | 15.0% |
| !!! | TGACATTTTAAAGTAAAAAC+AGG | - | tig0030761:24736-24755 | Msa1444610:CDS | 20.0% |
| !! | TCTAATTGATCATAATGAAT+CGG | - | tig0030761:25202-25221 | Msa1444610:CDS | 20.0% |
| !!! | TGAAAAAAAGAAGTATTACT+TGG | - | tig0030761:25526-25545 | Msa1444610:intron | 20.0% |
| !! | AAAATCCAGATATTTGAAAA+TGG | - | tig0030761:26238-26257 | Msa1444610:intron | 20.0% |
| !! | AAATCCAGATATTTGAAAAT+GGG | - | tig0030761:26239-26258 | Msa1444610:intron | 20.0% |
| !! | CGATAATATGAATATTAGTT+TGG | - | tig0030761:26390-26409 | Msa1444610:CDS | 20.0% |
| !! | GGTAAATGTAAAAGAAAATT+TGG | - | tig0030761:26411-26430 | Msa1444610:intron | 20.0% |
| !!! | TATCAAGCTTATTTTGAATA+AGG | + | tig0030761:26450-26469 | None:intergenic | 20.0% |
| !! | ACATCAATATTAACAACATT+AGG | - | tig0030761:26982-27001 | Msa1444610:intron | 20.0% |
| !! | TTTATGTGCAATAAAATTTG+GGG | - | tig0030761:27789-27808 | Msa1444610:CDS | 20.0% |
| !!! | CGTTGATTTTTTAATTTTTG+GGG | + | tig0030761:27964-27983 | None:intergenic | 20.0% |
| !!! | GATTTTATACAATTTTGTGT+CGG | - | tig0030761:28004-28023 | Msa1444610:intron | 20.0% |
| !! | AAATTTGCACATGAAATAAT+TGG | - | tig0030761:28185-28204 | Msa1444610:CDS | 20.0% |
| !! | CAATTTATCCAAAGATATTA+TGG | - | tig0030761:28316-28335 | Msa1444610:CDS | 20.0% |
| !! | TACAATAATACAATTCTCAA+AGG | + | tig0030761:28488-28507 | None:intergenic | 20.0% |
| !! | ATTAACTTCAAGAATTGAAA+CGG | + | tig0030761:28643-28662 | None:intergenic | 20.0% |
| !!! | TGCAATAAATGTTTGTTGTT+TGG | - | tig0030761:24617-24636 | Msa1444610:CDS | 25.0% |
| !!! | TTTGTTGTTTGGTTATCAAA+TGG | - | tig0030761:24628-24647 | Msa1444610:CDS | 25.0% |
| ! | AAAATTCATGTCACAAAACA+AGG | - | tig0030761:24812-24831 | Msa1444610:CDS | 25.0% |
| ! | AAATTCATGTCACAAAACAA+GGG | - | tig0030761:24813-24832 | Msa1444610:CDS | 25.0% |
| !!! | ATGTCATAAGTTGTTTTCAT+AGG | + | tig0030761:24913-24932 | None:intergenic | 25.0% |
| ! | GAAATAGCTTATACATAACT+TGG | - | tig0030761:25040-25059 | Msa1444610:CDS | 25.0% |
| ! | CTAATTGATCATAATGAATC+GGG | - | tig0030761:25203-25222 | Msa1444610:CDS | 25.0% |
| ! | AATAAACAACCAACAAAACA+TGG | + | tig0030761:25321-25340 | None:intergenic | 25.0% |
| !!! | ATACTTCTTTTTTTCAACTG+TGG | + | tig0030761:25522-25541 | None:intergenic | 25.0% |
| !!! | GTATTATCATTTTAGTTTGC+TGG | - | tig0030761:25615-25634 | Msa1444610:CDS | 25.0% |
| !! | ACATTTGTTAATGAACTAAG+TGG | - | tig0030761:25730-25749 | Msa1444610:intron | 25.0% |
| ! | TAAATGTATTTGTAACTGCA+GGG | - | tig0030761:25756-25775 | Msa1444610:intron | 25.0% |
| !!! | TATCGTATTGTTCTGAATTT+TGG | + | tig0030761:26375-26394 | None:intergenic | 25.0% |
| ! | CGGTAATAAAATACTAATCA+AGG | + | tig0030761:27455-27474 | None:intergenic | 25.0% |
| ! | TGATGTCAAAAGAATATCAA+AGG | + | tig0030761:27596-27615 | None:intergenic | 25.0% |
| !! | TTTTCGAACATTTTCTCTAA+AGG | + | tig0030761:27680-27699 | None:intergenic | 25.0% |
| ! | TATACAAAAATTGGAAGCAA+AGG | - | tig0030761:27709-27728 | Msa1444610:intron | 25.0% |
| ! | ATACAAAAATTGGAAGCAAA+GGG | - | tig0030761:27710-27729 | Msa1444610:intron | 25.0% |
| !!! | GATTTTTTAATTTTTGGGGT+GGG | + | tig0030761:27960-27979 | None:intergenic | 25.0% |
| !!! | TGATTTTTTAATTTTTGGGG+TGG | + | tig0030761:27961-27980 | None:intergenic | 25.0% |
| !!! | TACAATTTTATGTCGGTTTT+AGG | - | tig0030761:28125-28144 | Msa1444610:CDS | 25.0% |
| ! | ATTAAATTCATCATTTGCAG+TGG | + | tig0030761:28267-28286 | None:intergenic | 25.0% |
| ! | AGAATGTTCCATAATATCTT+TGG | + | tig0030761:28327-28346 | None:intergenic | 25.0% |
| !!! | GTACTTACATTTTGATTTAC+AGG | - | tig0030761:28505-28524 | Msa1444610:intron | 25.0% |
| !!! | ATTTTTTTGCTTATTAGCAG+AGG | - | tig0030761:29103-29122 | Msa1444610:intron | 25.0% |
| ! | TACAATTCCAAACAAGATAT+TGG | - | tig0030761:29300-29319 | Msa1444610:intron | 25.0% |
| ! | TAATTTCTGACTTAGATTCT+CGG | + | tig0030761:29346-29365 | None:intergenic | 25.0% |
| AAACATTTATTGCACAAGCA+TGG | + | tig0030761:24611-24630 | None:intergenic | 30.0% | |
| CTGTTTGGATTCACTTATTT+GGG | - | tig0030761:24837-24856 | Msa1444610:CDS | 30.0% | |
| ! | ATTAAGTTGTTTACCCAAAC+AGG | - | tig0030761:25087-25106 | Msa1444610:CDS | 30.0% |
| ! | TTAAGTTGTTTACCCAAACA+GGG | - | tig0030761:25088-25107 | Msa1444610:CDS | 30.0% |
| ! | GTCAAACAAAGCACTTAATT+TGG | + | tig0030761:25115-25134 | None:intergenic | 30.0% |
| ! | TACTAACAACCATGTTTTGT+TGG | - | tig0030761:25309-25328 | Msa1444610:CDS | 30.0% |
| AAAACACAGCATTATTGATG+TGG | + | tig0030761:25390-25409 | None:intergenic | 30.0% | |
| ! | ATAATGCTGTGTTTTATGCT+AGG | - | tig0030761:25395-25414 | Msa1444610:intron | 30.0% |
| ! | TTTTATGCTAGGCATATACA+TGG | - | tig0030761:25406-25425 | Msa1444610:intron | 30.0% |
| TTTATGCTAGGCATATACAT+GGG | - | tig0030761:25407-25426 | Msa1444610:intron | 30.0% | |
| AGAACTTGAATCAATTGACA+TGG | - | tig0030761:25454-25473 | Msa1444610:CDS | 30.0% | |
| CATGCAAAATCATATATGGT+CGG | + | tig0030761:25678-25697 | None:intergenic | 30.0% | |
| CATGCATGCAAAATCATATA+TGG | + | tig0030761:25682-25701 | None:intergenic | 30.0% | |
| CTAAATGTATTTGTAACTGC+AGG | - | tig0030761:25755-25774 | Msa1444610:intron | 30.0% | |
| ATTTCATGTTCTCTTTCTTG+AGG | - | tig0030761:25919-25938 | Msa1444610:intron | 30.0% | |
| TTTCATGTTCTCTTTCTTGA+GGG | - | tig0030761:25920-25939 | Msa1444610:intron | 30.0% | |
| TCTAGTACATTCAAACCTTT+GGG | + | tig0030761:25947-25966 | None:intergenic | 30.0% | |
| ! | TTCTTTTCTTGTCAGAAATC+TGG | - | tig0030761:26049-26068 | Msa1444610:intron | 30.0% |
| ! | GAAACCCATTTTCAAATATC+TGG | + | tig0030761:26246-26265 | None:intergenic | 30.0% |
| AATTCACCTCAAGAATAATG+CGG | + | tig0030761:26710-26729 | None:intergenic | 30.0% | |
| ATTTATTTCCAGCAAGTGAT+GGG | + | tig0030761:26908-26927 | None:intergenic | 30.0% | |
| AATTTATTTCCAGCAAGTGA+TGG | + | tig0030761:26909-26928 | None:intergenic | 30.0% | |
| TAATATTGATGTCGAGCAAT+GGG | + | tig0030761:26974-26993 | None:intergenic | 30.0% | |
| TTAATATTGATGTCGAGCAA+TGG | + | tig0030761:26975-26994 | None:intergenic | 30.0% | |
| TCTACTTATTGAAAAGCCAT+TGG | - | tig0030761:27059-27078 | Msa1444610:intron | 30.0% | |
| TGCATGCACAATATTCAAAA+AGG | - | tig0030761:27126-27145 | Msa1444610:CDS | 30.0% | |
| ATCATTGTTGAACATCATGA+TGG | - | tig0030761:27296-27315 | Msa1444610:intron | 30.0% | |
| AAAAAAAGGCAAGCTCAAAA+CGG | + | tig0030761:27475-27494 | None:intergenic | 30.0% | |
| TTATTCTACCATTCATATGC+AGG | - | tig0030761:27570-27589 | Msa1444610:CDS | 30.0% | |
| ! | TGATATTCTTTTGACATCAC+TGG | - | tig0030761:27597-27616 | Msa1444610:CDS | 30.0% |
| TACAAAAATTGGAAGCAAAG+GGG | - | tig0030761:27711-27730 | Msa1444610:intron | 30.0% | |
| !!! | CTGTCTTGATCCTTATTTTA+TGG | - | tig0030761:27849-27868 | Msa1444610:CDS | 30.0% |
| !!! | TACAATTTTGTGTCGGTTTT+AGG | - | tig0030761:28011-28030 | Msa1444610:intron | 30.0% |
| GAAATAATTGGTCACTTGAA+TGG | - | tig0030761:28197-28216 | Msa1444610:CDS | 30.0% | |
| ! | TGGAGCTAGAAAATATTTTG+GGG | + | tig0030761:28244-28263 | None:intergenic | 30.0% |
| ! | GTGGAGCTAGAAAATATTTT+GGG | + | tig0030761:28245-28264 | None:intergenic | 30.0% |
| AAACACACATTTCAATGTGT+TGG | - | tig0030761:28293-28312 | Msa1444610:CDS | 30.0% | |
| !! | CAATTTGGACAACTGATTTT+AGG | - | tig0030761:28555-28574 | Msa1444610:intron | 30.0% |
| ! | TTTCATCTTCCTGTGTTATT+TGG | - | tig0030761:29023-29042 | Msa1444610:intron | 30.0% |
| !!! | TTATTTGGTTTTGAGCATCT+GGG | - | tig0030761:29038-29057 | Msa1444610:intron | 30.0% |
| ! | ATTAGCAGAAGGTTTAACTT+TGG | + | tig0030761:29202-29221 | None:intergenic | 30.0% |
| AAGTCAGAAATTAAAACAGC+AGG | - | tig0030761:29353-29372 | Msa1444610:intron | 30.0% | |
| AGTCAGAAATTAAAACAGCA+GGG | - | tig0030761:29354-29373 | Msa1444610:intron | 30.0% | |
| TGGAATATGATCATGGAAAT+TGG | - | tig0030761:29688-29707 | Msa1444610:intron | 30.0% | |
| GGAATATGATCATGGAAATT+GGG | - | tig0030761:29689-29708 | Msa1444610:intron | 30.0% | |
| TGAATAGAGTAGTGAATGTA+GGG | - | tig0030761:29862-29881 | Msa1444610:intron | 30.0% | |
| ATGGAGATTCAAAACGTGAA+TGG | - | tig0030761:24647-24666 | Msa1444610:CDS | 35.0% | |
| CCAAATAAGTGAATCCAAAC+AGG | + | tig0030761:24839-24858 | None:intergenic | 35.0% | |
| CCTGTTTGGATTCACTTATT+TGG | - | tig0030761:24836-24855 | Msa1444610:CDS | 35.0% | |
| ACATAACTTGGTAAGTGCTT+TGG | - | tig0030761:25052-25071 | Msa1444610:CDS | 35.0% | |
| ! | ACTTAATTTGGACCCTGTTT+GGG | + | tig0030761:25103-25122 | None:intergenic | 35.0% |
| TGGATGACTATACCAAGTTT+AGG | - | tig0030761:25141-25160 | Msa1444610:CDS | 35.0% | |
| ATGACTATACCAAGTTTAGG+CGG | - | tig0030761:25144-25163 | Msa1444610:CDS | 35.0% | |
| TTATGCTAGGCATATACATG+GGG | - | tig0030761:25408-25427 | Msa1444610:intron | 35.0% | |
| CTCTTCTTTATCATTTGCAC+AGG | + | tig0030761:25553-25572 | None:intergenic | 35.0% | |
| CTGTGCAAATGATAAAGAAG+AGG | - | tig0030761:25551-25570 | Msa1444610:intron | 35.0% | |
| GTCATTTCTACACTTCGTAA+TGG | - | tig0030761:25798-25817 | Msa1444610:intron | 35.0% | |
| CTAGTACATTCAAACCTTTG+GGG | + | tig0030761:25946-25965 | None:intergenic | 35.0% | |
| CTCTAGTACATTCAAACCTT+TGG | + | tig0030761:25948-25967 | None:intergenic | 35.0% | |
| ! | CTTTCTTGCTTCTGAAAGAA+TGG | + | tig0030761:26218-26237 | None:intergenic | 35.0% |
| !! | TTTGAAAATGGGTTTCTAGC+TGG | - | tig0030761:26250-26269 | Msa1444610:intron | 35.0% |
| !! | AGAAAGTGATGAAGTTGATG+AGG | - | tig0030761:26309-26328 | Msa1444610:intron | 35.0% |
| TTTACCAAATCATCGTCTTC+AGG | + | tig0030761:26337-26356 | None:intergenic | 35.0% | |
| ! | GATTTGGTAAATCCTTCAAG+TGG | - | tig0030761:26346-26365 | Msa1444610:intron | 35.0% |
| !!! | GAATTTTGGTTTCCACTTGA+AGG | + | tig0030761:26361-26380 | None:intergenic | 35.0% |
| TTTAGATTTCCACAAGCAAC+TGG | + | tig0030761:26541-26560 | None:intergenic | 35.0% | |
| TTCAATCCGCATTATTCTTG+AGG | - | tig0030761:26701-26720 | Msa1444610:CDS | 35.0% | |
| ! | AACTGTTTCTCAGGATAGAT+TGG | - | tig0030761:26791-26810 | Msa1444610:CDS | 35.0% |
| !! | ATGCTCTGAAAAAGCAAATG+TGG | - | tig0030761:26823-26842 | Msa1444610:CDS | 35.0% |
| !! | TGCTCTGAAAAAGCAAATGT+GGG | - | tig0030761:26824-26843 | Msa1444610:CDS | 35.0% |
| ATGCAACAAACTGCCAATAT+CGG | + | tig0030761:27244-27263 | None:intergenic | 35.0% | |
| TACGAACAAAGACATCAATG+TGG | + | tig0030761:27367-27386 | None:intergenic | 35.0% | |
| ATGCTCTGTGAGAGAAAAAA+AGG | + | tig0030761:27489-27508 | None:intergenic | 35.0% | |
| GTATAATTCGTCCAAGACAA+TGG | + | tig0030761:27514-27533 | None:intergenic | 35.0% | |
| ATTTCACAAATATCCACCTG+AGG | + | tig0030761:27829-27848 | None:intergenic | 35.0% | |
| TGGGAGTCTTCCATAAAATA+AGG | + | tig0030761:27862-27881 | None:intergenic | 35.0% | |
| GATCATTTGACGGAAATGTT+TGG | + | tig0030761:27900-27919 | None:intergenic | 35.0% | |
| !!! | TTTGTGTCGGTTTTAGGTTT+CGG | - | tig0030761:28017-28036 | Msa1444610:intron | 35.0% |
| AACACTAAAACTCCTTTACG+CGG | - | tig0030761:28161-28180 | Msa1444610:CDS | 35.0% | |
| !! | CTAGAAAATATTTTGGGGGT+GGG | + | tig0030761:28239-28258 | None:intergenic | 35.0% |
| !! | GGAGCTAGAAAATATTTTGG+GGG | + | tig0030761:28243-28262 | None:intergenic | 35.0% |
| ! | GGTGGAGCTAGAAAATATTT+TGG | + | tig0030761:28246-28265 | None:intergenic | 35.0% |
| AAATTCATCATTTGCAGTGG+TGG | + | tig0030761:28264-28283 | None:intergenic | 35.0% | |
| ! | CTGAAGCATTCGAAACAATT+TGG | - | tig0030761:28540-28559 | Msa1444610:intron | 35.0% |
| !!! | AACTGATTTTAGGAAGCGTT+GGG | - | tig0030761:28565-28584 | Msa1444610:intron | 35.0% |
| !! | TATGAATGTCAGCATTGACA+TGG | + | tig0030761:28707-28726 | None:intergenic | 35.0% |
| AAGGTCAACATCTGCAAAAT+AGG | + | tig0030761:28739-28758 | None:intergenic | 35.0% | |
| !! | CCTTATTTGAAAAAGCGCTA+CGG | - | tig0030761:28755-28774 | Msa1444610:intron | 35.0% |
| TCTACAACAGACGAATTGTT+GGG | - | tig0030761:28802-28821 | Msa1444610:intron | 35.0% | |
| TGCTCAAAACCAAATAACAC+AGG | + | tig0030761:29035-29054 | None:intergenic | 35.0% | |
| !!! | GTTATTTGGTTTTGAGCATC+TGG | - | tig0030761:29037-29056 | Msa1444610:intron | 35.0% |
| ! | TTGAAGGGAGTATATCTTGA+TGG | + | tig0030761:29132-29151 | None:intergenic | 35.0% |
| AATTCTCTGTTAGGCTTGAA+GGG | + | tig0030761:29147-29166 | None:intergenic | 35.0% | |
| AAATTCTCTGTTAGGCTTGA+AGG | + | tig0030761:29148-29167 | None:intergenic | 35.0% | |
| ! | CGTGCAATTTTATTAGCAGA+AGG | + | tig0030761:29213-29232 | None:intergenic | 35.0% |
| GCTAATAAAATTGCACGAAG+TGG | - | tig0030761:29216-29235 | Msa1444610:intron | 35.0% | |
| AAATTAAAACAGCAGGGACA+GGG | - | tig0030761:29360-29379 | Msa1444610:intron | 35.0% | |
| AAGAGAACCATTGAGAAACT+TGG | - | tig0030761:29500-29519 | Msa1444610:intron | 35.0% | |
| TCTTCATCCAAGTTTCTCAA+TGG | + | tig0030761:29510-29529 | None:intergenic | 35.0% | |
| TGAGAAACTTGGATGAAGAA+TGG | - | tig0030761:29511-29530 | Msa1444610:intron | 35.0% | |
| GAGAAACTTGGATGAAGAAT+GGG | - | tig0030761:29512-29531 | Msa1444610:intron | 35.0% | |
| AATTGGGAGATAGGTTACAA+CGG | - | tig0030761:29705-29724 | Msa1444610:intron | 35.0% | |
| AGATGAAGAAGACAATGAAG+AGG | - | tig0030761:29794-29813 | Msa1444610:intron | 35.0% | |
| TTCACTCATAACATCTTCCT+CGG | + | tig0030761:29826-29845 | None:intergenic | 35.0% | |
| AGATGTTATGAGTGAAGGTT+CGG | - | tig0030761:29830-29849 | Msa1444610:intron | 35.0% | |
| CTGAATAGAGTAGTGAATGT+AGG | - | tig0030761:29861-29880 | Msa1444610:intron | 35.0% | |
| GAATAGAGTAGTGAATGTAG+GGG | - | tig0030761:29863-29882 | Msa1444610:intron | 35.0% | |
| AATAGAGTAGTGAATGTAGG+GGG | - | tig0030761:29864-29883 | Msa1444610:intron | 35.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | - | tig0030761:24882-24901 | Msa1444610:CDS | 40.0% | |
| AAGCACTTGTGAGACTGTTT+GGG | - | tig0030761:24883-24902 | Msa1444610:CDS | 40.0% | |
| ! | CACTTAATTTGGACCCTGTT+TGG | + | tig0030761:25104-25123 | None:intergenic | 40.0% |
| TTGGTATAGTCATCCACACT+TGG | + | tig0030761:25137-25156 | None:intergenic | 40.0% | |
| TAATGATCACCGCCTAAACT+TGG | + | tig0030761:25156-25175 | None:intergenic | 40.0% | |
| GCTAACTGTCGCAAAATTTC+AGG | + | tig0030761:25480-25499 | None:intergenic | 40.0% | |
| TTAGCACTATCTGCAGGATT+TGG | - | tig0030761:25495-25514 | Msa1444610:CDS | 40.0% | |
| TTGTAACTGCAGGGAAAAAG+TGG | - | tig0030761:25765-25784 | Msa1444610:intron | 40.0% | |
| ! | CATTTTTGCCACTGCACTTA+CGG | + | tig0030761:25832-25851 | None:intergenic | 40.0% |
| GCTGCAAATTTAACTGTTCC+TGG | + | tig0030761:25899-25918 | None:intergenic | 40.0% | |
| ! | CTTGTCAGAAATCTGGTCTT+CGG | - | tig0030761:26056-26075 | Msa1444610:intron | 40.0% |
| ! | TTGTCAGAAATCTGGTCTTC+GGG | - | tig0030761:26057-26076 | Msa1444610:intron | 40.0% |
| ! | GACACCTGAAGCATCAATTT+CGG | - | tig0030761:26096-26115 | Msa1444610:intron | 40.0% |
| GTTCGTACACGATATGTTGA+TGG | + | tig0030761:26163-26182 | None:intergenic | 40.0% | |
| TGTACGAACTGCATTTAGAC+AGG | - | tig0030761:26174-26193 | Msa1444610:intron | 40.0% | |
| !!! | CTGTCTTGTTTTCCTGAGAA+TGG | - | tig0030761:26475-26494 | Msa1444610:intron | 40.0% |
| ! | TTTTCCTGAGAATGGTTCCA+AGG | - | tig0030761:26483-26502 | Msa1444610:intron | 40.0% |
| GAAATCGATGAAAGCAAGTC+TGG | - | tig0030761:26573-26592 | Msa1444610:CDS | 40.0% | |
| TCTAAACGCTCTTGTTGCAT+TGG | - | tig0030761:26656-26675 | Msa1444610:CDS | 40.0% | |
| TTAGATTTCCCATCACTTGC+TGG | - | tig0030761:26897-26916 | Msa1444610:intron | 40.0% | |
| !!! | CTTTGGTTTTCTGCAGTGAT+GGG | + | tig0030761:27020-27039 | None:intergenic | 40.0% |
| !!! | TCTTTGGTTTTCTGCAGTGA+TGG | + | tig0030761:27021-27040 | None:intergenic | 40.0% |
| ATCACTGCAGAAAACCAAAG+AGG | - | tig0030761:27020-27039 | Msa1444610:intron | 40.0% | |
| CAATAAGTAGACTGTGCAGA+AGG | + | tig0030761:27050-27069 | None:intergenic | 40.0% | |
| CAGAAATCATGAGCTACCAA+TGG | + | tig0030761:27078-27097 | None:intergenic | 40.0% | |
| ATACATCTCGTCTGCTATGT+GGG | + | tig0030761:27180-27199 | None:intergenic | 40.0% | |
| TCTGCTTCTAGTAATGATCC+TGG | - | tig0030761:27263-27282 | Msa1444610:intron | 40.0% | |
| TCTAGTAATGATCCTGGTTC+TGG | - | tig0030761:27269-27288 | Msa1444610:intron | 40.0% | |
| TTGAACATCATGATGGCAGT+TGG | - | tig0030761:27303-27322 | Msa1444610:intron | 40.0% | |
| !! | GAGGCTTATTGATTCTGAAG+AGG | - | tig0030761:27325-27344 | Msa1444610:intron | 40.0% |
| AACAAAGACATCAATGTGGC+AGG | + | tig0030761:27363-27382 | None:intergenic | 40.0% | |
| ATCAAAGGCCTGCATATGAA+TGG | + | tig0030761:27581-27600 | None:intergenic | 40.0% | |
| TGAAAACTGAAGCTGATGAG+TGG | - | tig0030761:27743-27762 | Msa1444610:CDS | 40.0% | |
| CATTTGACGGAAATGTTTGG+TGG | + | tig0030761:27897-27916 | None:intergenic | 40.0% | |
| CATTTCCGTCAAATGATCAG+TGG | - | tig0030761:27902-27921 | Msa1444610:intron | 40.0% | |
| TGATCCAAATTCCCGTAAAG+TGG | - | tig0030761:28041-28060 | Msa1444610:CDS | 40.0% | |
| TACACCACTTTACGGGAATT+TGG | + | tig0030761:28048-28067 | None:intergenic | 40.0% | |
| !! | GCGTAAAGGAGTTTTAGTGT+TGG | + | tig0030761:28162-28181 | None:intergenic | 40.0% |
| TGTGCAAATTTACCGCGTAA+AGG | + | tig0030761:28176-28195 | None:intergenic | 40.0% | |
| !! | GCTAGAAAATATTTTGGGGG+TGG | + | tig0030761:28240-28259 | None:intergenic | 40.0% |
| TTAAGCAATCTTGTCCTCAG+AGG | + | tig0030761:28353-28372 | None:intergenic | 40.0% | |
| TCTGAGGACAAGATTGCTTA+AGG | - | tig0030761:28352-28371 | Msa1444610:CDS | 40.0% | |
| !! | CAACTGATTTTAGGAAGCGT+TGG | - | tig0030761:28564-28583 | Msa1444610:intron | 40.0% |
| !!! | ACTGATTTTAGGAAGCGTTG+GGG | - | tig0030761:28566-28585 | Msa1444610:intron | 40.0% |
| GTTGAGTAAATCATCATCCG+TGG | - | tig0030761:28595-28614 | Msa1444610:CDS | 40.0% | |
| AACCTGTAAAAGTTCCTCCA+CGG | + | tig0030761:28615-28634 | None:intergenic | 40.0% | |
| !!! | CCGTAGCGCTTTTTCAAATA+AGG | + | tig0030761:28758-28777 | None:intergenic | 40.0% |
| CTCTACAACAGACGAATTGT+TGG | - | tig0030761:28801-28820 | Msa1444610:intron | 40.0% | |
| AATCAGTTGCTCTACTTCCA+TGG | - | tig0030761:28874-28893 | Msa1444610:intron | 40.0% | |
| ATCAGTTGCTCTACTTCCAT+GGG | - | tig0030761:28875-28894 | Msa1444610:intron | 40.0% | |
| CTCAAGCTTTACGTAGTTGA+TGG | + | tig0030761:28952-28971 | None:intergenic | 40.0% | |
| CAAGCCTAACAGAGAATTTG+AGG | - | tig0030761:29149-29168 | Msa1444610:intron | 40.0% | |
| TATTGGCCGTCGAAACATTA+AGG | - | tig0030761:29317-29336 | Msa1444610:intron | 40.0% | |
| GAAATTAAAACAGCAGGGAC+AGG | - | tig0030761:29359-29378 | Msa1444610:intron | 40.0% | |
| !! | AGCTGTTGAAGATTTGTTGC+TGG | - | tig0030761:29443-29462 | Msa1444610:intron | 40.0% |
| !! | GCTGTTGAAGATTTGTTGCT+GGG | - | tig0030761:29444-29463 | Msa1444610:intron | 40.0% |
| CTATGACTCCTGTTCACATT+GGG | - | tig0030761:29553-29572 | Msa1444610:intron | 40.0% | |
| TATGACTCCTGTTCACATTG+GGG | - | tig0030761:29554-29573 | Msa1444610:intron | 40.0% | |
| ! | GAATAGTAACAGTGCTGAAG+AGG | - | tig0030761:29584-29603 | Msa1444610:intron | 40.0% |
| ! | TGATGATAATGCTCAAGCAG+TGG | - | tig0030761:29614-29633 | Msa1444610:intron | 40.0% |
| CACTGCTTGAACATCATCAT+CGG | + | tig0030761:29643-29662 | None:intergenic | 40.0% | |
| CAAGCAGTGGAATATGATCA+TGG | - | tig0030761:29681-29700 | Msa1444610:intron | 40.0% | |
| GATCATGGAAATTGGGAGAT+AGG | - | tig0030761:29696-29715 | Msa1444610:intron | 40.0% | |
| AATCCCTATCCCATCTGTTA+GGG | + | tig0030761:29737-29756 | None:intergenic | 40.0% | |
| AAATCCCTATCCCATCTGTT+AGG | + | tig0030761:29738-29757 | None:intergenic | 40.0% | |
| TAACAGATGGGATAGGGATT+TGG | - | tig0030761:29737-29756 | Msa1444610:intron | 40.0% | |
| TGGAATGAGTGATGAAGATG+TGG | - | tig0030761:29761-29780 | Msa1444610:intron | 40.0% | |
| GAGGAAGATGTTATGAGTGA+AGG | - | tig0030761:29825-29844 | Msa1444610:intron | 40.0% | |
| TCACAAAACAAGGGCCTGTT+TGG | - | tig0030761:24822-24841 | Msa1444610:CDS | 45.0% | |
| !! | GTGCTTTGTTTGACCAAGTG+TGG | - | tig0030761:25121-25140 | Msa1444610:CDS | 45.0% |
| ! | GGGGCTTTGACATACGAAAT+TGG | - | tig0030761:25427-25446 | Msa1444610:intron | 45.0% |
| TGCAGTGGCAAAAATGCGAA+AGG | - | tig0030761:25836-25855 | Msa1444610:CDS | 45.0% | |
| AGAGCTTGCAGAGAAGATTC+AGG | - | tig0030761:25964-25983 | Msa1444610:intron | 45.0% | |
| GCAACCGAAATTGATGCTTC+AGG | + | tig0030761:26103-26122 | None:intergenic | 45.0% | |
| ! | TCGGTTGCTTTGACAAGAGA+TGG | - | tig0030761:26115-26134 | Msa1444610:intron | 45.0% |
| GGATCCTGAAGACGATGATT+TGG | - | tig0030761:26330-26349 | Msa1444610:intron | 45.0% | |
| AAAGCAAGTCTGGAGAACCA+TGG | - | tig0030761:26583-26602 | Msa1444610:CDS | 45.0% | |
| AAGCAAGTCTGGAGAACCAT+GGG | - | tig0030761:26584-26603 | Msa1444610:CDS | 45.0% | |
| ACCATGGGTTCAAGGACTTA+CGG | - | tig0030761:26599-26618 | Msa1444610:CDS | 45.0% | |
| ! | AACGCTCTTGTTGCATTGGT+TGG | - | tig0030761:26660-26679 | Msa1444610:CDS | 45.0% |
| !! | TCTTGTTGCATTGGTTGGTG+TGG | - | tig0030761:26665-26684 | Msa1444610:CDS | 45.0% |
| ! | TTGGTTGGTGTGGCAAATGA+AGG | - | tig0030761:26675-26694 | Msa1444610:CDS | 45.0% |
| ! | GTTGACGTGAACTGTTTCTC+AGG | - | tig0030761:26782-26801 | Msa1444610:CDS | 45.0% |
| ACAAGACACATATCCTGCTG+TGG | - | tig0030761:26935-26954 | Msa1444610:intron | 45.0% | |
| ! | TGCATGCATCTAGAGTTGTC+CGG | + | tig0030761:27114-27133 | None:intergenic | 45.0% |
| CATACATCTCGTCTGCTATG+TGG | + | tig0030761:27181-27200 | None:intergenic | 45.0% | |
| CAGACGAGATGTATGTCTAC+AGG | - | tig0030761:27186-27205 | Msa1444610:CDS | 45.0% | |
| AACATCATGATGGCAGTTGG+AGG | - | tig0030761:27306-27325 | Msa1444610:intron | 45.0% | |
| ACAGAGCATAGCCATTGTCT+TGG | - | tig0030761:27500-27519 | Msa1444610:CDS | 45.0% | |
| TTGACATCACTGGATTCACG+CGG | - | tig0030761:27607-27626 | Msa1444610:CDS | 45.0% | |
| GGTAAAGAGATGCAAACCTC+AGG | - | tig0030761:27810-27829 | Msa1444610:CDS | 45.0% | |
| AAAGAGATGCAAACCTCAGG+TGG | - | tig0030761:27813-27832 | Msa1444610:CDS | 45.0% | |
| TTCCGTCAAATGATCAGTGG+CGG | - | tig0030761:27905-27924 | Msa1444610:intron | 45.0% | |
| ATTCCCGTAAAGTGGTGTAG+TGG | - | tig0030761:28049-28068 | Msa1444610:CDS | 45.0% | |
| TGAGCCACTACACCACTTTA+CGG | + | tig0030761:28056-28075 | None:intergenic | 45.0% | |
| TGGAACATTCTCTTCCTCTG+AGG | - | tig0030761:28336-28355 | Msa1444610:CDS | 45.0% | |
| TAAGGTCCTGCTGTCATGTA+TGG | - | tig0030761:28370-28389 | Msa1444610:intron | 45.0% | |
| ! | CATGTATGGAGGTGAGTTGA+TGG | - | tig0030761:28384-28403 | Msa1444610:intron | 45.0% |
| !! | AGGTGAGTTGATGGCAACTT+TGG | - | tig0030761:28393-28412 | Msa1444610:intron | 45.0% |
| GAGTAAATCATCATCCGTGG+AGG | - | tig0030761:28598-28617 | Msa1444610:CDS | 45.0% | |
| ! | ATCCGTGGAGGAACTTTTAC+AGG | - | tig0030761:28610-28629 | Msa1444610:CDS | 45.0% |
| ! | AGCAACTGATTCAGGATCAG+AGG | + | tig0030761:28865-28884 | None:intergenic | 45.0% |
| ! | GGAAGTAGAGCAACTGATTC+AGG | + | tig0030761:28873-28892 | None:intergenic | 45.0% |
| GTTGCTTCTTTCTCCTCAAC+AGG | + | tig0030761:28984-29003 | None:intergenic | 45.0% | |
| GCTGCCTCAAATTCTCTGTT+AGG | + | tig0030761:29156-29175 | None:intergenic | 45.0% | |
| CACGAAGTGGAAACAAACGT+GGG | - | tig0030761:29229-29248 | Msa1444610:intron | 45.0% | |
| TCGACGGCCAATATCTTGTT+TGG | + | tig0030761:29310-29329 | None:intergenic | 45.0% | |
| CGGTGACCTTAATGTTTCGA+CGG | + | tig0030761:29326-29345 | None:intergenic | 45.0% | |
| ! | CTCTACGTTTTCTGACCGTT+CGG | + | tig0030761:29416-29435 | None:intergenic | 45.0% |
| CCAATGTGAACAGGAGTCAT+AGG | + | tig0030761:29555-29574 | None:intergenic | 45.0% | |
| CCTATGACTCCTGTTCACAT+TGG | - | tig0030761:29552-29571 | Msa1444610:intron | 45.0% | |
| ! | TAGTAACAGTGCTGAAGAGG+TGG | - | tig0030761:29587-29606 | Msa1444610:intron | 45.0% |
| ! | CGATGATGATGTTCAAGCAG+TGG | - | tig0030761:29641-29660 | Msa1444610:intron | 45.0% |
| CACTGCTTGAGCATCATCAT+CGG | + | tig0030761:29670-29689 | None:intergenic | 45.0% | |
| ATCCCTATCCCATCTGTTAG+GGG | + | tig0030761:29736-29755 | None:intergenic | 45.0% | |
| ! | AGATGGGATAGGGATTTGGT+TGG | - | tig0030761:29741-29760 | Msa1444610:intron | 45.0% |
| CAATGAAGAGGAAGATTCCG+AGG | - | tig0030761:29806-29825 | Msa1444610:intron | 45.0% | |
| GTTATGAGTGAAGGTTCGGA+TGG | - | tig0030761:29834-29853 | Msa1444610:intron | 45.0% | |
| !!! | TTGAATTATTTAAATTTTTT+GGG | + | tig0030761:28079-28098 | None:intergenic | 5.0% |
| !!! | ATTGAATTATTTAAATTTTT+TGG | + | tig0030761:28080-28099 | None:intergenic | 5.0% |
| !! | AATTTAAATAATTCAATTAT+AGG | - | tig0030761:28083-28102 | Msa1444610:CDS | 5.0% |
| CGACAGTTAGCACTATCTGC+AGG | - | tig0030761:25489-25508 | Msa1444610:CDS | 50.0% | |
| AACCTGTGTCTCGATCTTCG+AGG | + | tig0030761:25872-25891 | None:intergenic | 50.0% | |
| TCGAGACACAGGTTAACTCC+AGG | - | tig0030761:25878-25897 | Msa1444610:CDS | 50.0% | |
| TGATGCTTCAGGTGTCTTGC+TGG | + | tig0030761:26092-26111 | None:intergenic | 50.0% | |
| ! | AGAATGGACTCAGCATCTGC+AGG | + | tig0030761:26202-26221 | None:intergenic | 50.0% |
| GCATCCTTGGAACCATTCTC+AGG | + | tig0030761:26490-26509 | None:intergenic | 50.0% | |
| AGAGGGACAATTGGCATCCT+TGG | + | tig0030761:26503-26522 | None:intergenic | 50.0% | |
| GGTGACAGAAGAGGGACAAT+TGG | + | tig0030761:26512-26531 | None:intergenic | 50.0% | |
| GGTTGTCTGGTGACAGAAGA+GGG | + | tig0030761:26520-26539 | None:intergenic | 50.0% | |
| TGGTTGTCTGGTGACAGAAG+AGG | + | tig0030761:26521-26540 | None:intergenic | 50.0% | |
| ACCAGACAACCAGTTGCTTG+TGG | - | tig0030761:26529-26548 | Msa1444610:CDS | 50.0% | |
| TCCACAAGCAACTGGTTGTC+TGG | + | tig0030761:26533-26552 | None:intergenic | 50.0% | |
| TCTGGAGAACCATGGGTTCA+AGG | - | tig0030761:26591-26610 | Msa1444610:CDS | 50.0% | |
| TCCGTAAGTCCTTGAACCCA+TGG | + | tig0030761:26603-26622 | None:intergenic | 50.0% | |
| TGGGTTCAAGGACTTACGGA+AGG | - | tig0030761:26603-26622 | Msa1444610:CDS | 50.0% | |
| AGACACATATCCTGCTGTGG+AGG | - | tig0030761:26938-26957 | Msa1444610:intron | 50.0% | |
| GACACATATCCTGCTGTGGA+GGG | - | tig0030761:26939-26958 | Msa1444610:intron | 50.0% | |
| ! | CTTTGATTTCCCTCCACAGC+AGG | + | tig0030761:26951-26970 | None:intergenic | 50.0% |
| GTGCAGAAGGAGTTCCTCTT+TGG | + | tig0030761:27037-27056 | None:intergenic | 50.0% | |
| GTAGCTCATGATTTCTGCCC+AGG | - | tig0030761:27081-27100 | Msa1444610:intron | 50.0% | |
| !! | GTAATGATCCTGGTTCTGGC+AGG | - | tig0030761:27273-27292 | Msa1444610:intron | 50.0% |
| ACAATGATCCTGCCAGAACC+AGG | + | tig0030761:27284-27303 | None:intergenic | 50.0% | |
| TGACATCACTGGATTCACGC+GGG | - | tig0030761:27608-27627 | Msa1444610:CDS | 50.0% | |
| ! | TTGGTGGCAGGAATTGCAGT+GGG | + | tig0030761:27881-27900 | None:intergenic | 50.0% |
| ! | TTTGGTGGCAGGAATTGCAG+TGG | + | tig0030761:27882-27901 | None:intergenic | 50.0% |
| ! | TGACGGAAATGTTTGGTGGC+AGG | + | tig0030761:27893-27912 | None:intergenic | 50.0% |
| CTCCGCCACTGATCATTTGA+CGG | + | tig0030761:27910-27929 | None:intergenic | 50.0% | |
| !!! | TTAATTTTTGGGGTGGGCCG+TGG | + | tig0030761:27954-27973 | None:intergenic | 50.0% |
| GAGCCACTACACCACTTTAC+GGG | + | tig0030761:28055-28074 | None:intergenic | 50.0% | |
| TCACCTCCATACATGACAGC+AGG | + | tig0030761:28379-28398 | None:intergenic | 50.0% | |
| GACAATGCTGCAGTGGTTAG+AGG | + | tig0030761:28903-28922 | None:intergenic | 50.0% | |
| TGAGAGACTTGAGCCTGTTG+AGG | - | tig0030761:28968-28987 | Msa1444610:CDS | 50.0% | |
| GCAGCAGCTCTTGATCATGA+TGG | - | tig0030761:29171-29190 | Msa1444610:intron | 50.0% | |
| GCACGAAGTGGAAACAAACG+TGG | - | tig0030761:29228-29247 | Msa1444610:intron | 50.0% | |
| GAGGAGCTAGTGATCTTGGA+CGG | - | tig0030761:29253-29272 | Msa1444610:intron | 50.0% | |
| AGGAGCTAGTGATCTTGGAC+GGG | - | tig0030761:29254-29273 | Msa1444610:intron | 50.0% | |
| GACAGGGAACACAAGGACAA+GGG | - | tig0030761:29376-29395 | Msa1444610:intron | 50.0% | |
| ACAGGGAACACAAGGACAAG+GGG | - | tig0030761:29377-29396 | Msa1444610:intron | 50.0% | |
| ! | AACTATGACTGGCTGCTGCA+TGG | + | tig0030761:29470-29489 | None:intergenic | 50.0% |
| AGCAGCCAGTCATAGTTCCA+AGG | - | tig0030761:29473-29492 | Msa1444610:intron | 50.0% | |
| GCAGCCAGTCATAGTTCCAA+GGG | - | tig0030761:29474-29493 | Msa1444610:intron | 50.0% | |
| TCCACCCTTGGAACTATGAC+TGG | + | tig0030761:29481-29500 | None:intergenic | 50.0% | |
| CAATGGTTCTCTTCCACCCT+TGG | + | tig0030761:29493-29512 | None:intergenic | 50.0% | |
| TCAGCAACCCCAATGTGAAC+AGG | + | tig0030761:29564-29583 | None:intergenic | 50.0% | |
| ! | CGATGATGATGCTCAAGCAG+TGG | - | tig0030761:29668-29687 | Msa1444610:intron | 50.0% |
| TCTCCCCTAACAGATGGGAT+AGG | - | tig0030761:29730-29749 | Msa1444610:intron | 50.0% | |
| CTCCCCTAACAGATGGGATA+GGG | - | tig0030761:29731-29750 | Msa1444610:intron | 50.0% | |
| TTCAGCAGCCGTAAGTGCAG+TGG | - | tig0030761:25821-25840 | Msa1444610:CDS | 55.0% | |
| CTCCTCGAAGATCGAGACAC+AGG | - | tig0030761:25867-25886 | Msa1444610:CDS | 55.0% | |
| CTCTTTCTTGAGGGCCCCAA+AGG | - | tig0030761:25929-25948 | Msa1444610:intron | 55.0% | |
| ! | CAGGTGTCTTGCTGGTTGTC+AGG | + | tig0030761:26084-26103 | None:intergenic | 55.0% |
| CATGATTTCTGCCCAGGCAC+AGG | - | tig0030761:27087-27106 | Msa1444610:intron | 55.0% | |
| GTCTACAGGTCTCTACCCCT+TGG | - | tig0030761:27200-27219 | Msa1444610:CDS | 55.0% | |
| ACCGCAGGCGTAACCGATAT+TGG | - | tig0030761:27228-27247 | Msa1444610:intron | 55.0% | |
| ! | GCCAATATCGGTTACGCCTG+CGG | + | tig0030761:27232-27251 | None:intergenic | 55.0% |
| ACTGGATTCACGCGGGATCA+GGG | - | tig0030761:27615-27634 | Msa1444610:CDS | 55.0% | |
| GGTCCTGCTGTCATGTATGG+AGG | - | tig0030761:28373-28392 | Msa1444610:intron | 55.0% | |
| GCAGTGGTTAGAGGAACCCA+TGG | + | tig0030761:28894-28913 | None:intergenic | 55.0% | |
| CCTGAGAGACAATGCTGCAG+TGG | + | tig0030761:28910-28929 | None:intergenic | 55.0% | |
| CCACTGCAGCATTGTCTCTC+AGG | - | tig0030761:28907-28926 | Msa1444610:CDS | 55.0% | |
| AGTGGAAACAAACGTGGGCG+AGG | - | tig0030761:29234-29253 | Msa1444610:intron | 55.0% | |
| GGAGCTAGTGATCTTGGACG+GGG | - | tig0030761:29255-29274 | Msa1444610:intron | 55.0% | |
| GGACAGGGAACACAAGGACA+AGG | - | tig0030761:29375-29394 | Msa1444610:intron | 55.0% | |
| CAGGGAACACAAGGACAAGG+GGG | - | tig0030761:29378-29397 | Msa1444610:intron | 55.0% | |
| GCCAGTCATAGTTCCAAGGG+TGG | - | tig0030761:29477-29496 | Msa1444610:intron | 55.0% | |
| ACGGTGTCTCCCCTAACAGA+TGG | - | tig0030761:29724-29743 | Msa1444610:intron | 55.0% | |
| CGGTGTCTCCCCTAACAGAT+GGG | - | tig0030761:29725-29744 | Msa1444610:intron | 55.0% | |
| TTTCTGCCCAGGCACAGGTC+CGG | - | tig0030761:27092-27111 | Msa1444610:intron | 60.0% | |
| AGTTGTCCGGACCTGTGCCT+GGG | + | tig0030761:27101-27120 | None:intergenic | 60.0% | |
| CACTGGATTCACGCGGGATC+AGG | - | tig0030761:27614-27633 | Msa1444610:CDS | 60.0% | |
| ! | ATCAGTGGCGGAGCCCTTCA+TGG | - | tig0030761:27917-27936 | Msa1444610:intron | 60.0% |
| ! | TCAGTGGCGGAGCCCTTCAT+GGG | - | tig0030761:27918-27937 | Msa1444610:intron | 60.0% |
| ! | AGCCCTTCATGGGCTGAGGT+GGG | - | tig0030761:27928-27947 | Msa1444610:intron | 60.0% |
| GGGCGAGGAGCTAGTGATCT+TGG | - | tig0030761:29249-29268 | Msa1444610:intron | 60.0% | |
| CAGCAGGGACAGGGAACACA+AGG | - | tig0030761:29369-29388 | Msa1444610:intron | 60.0% | |
| GGAACACAAGGACAAGGGGG+TGG | - | tig0030761:29381-29400 | Msa1444610:intron | 60.0% | |
| GAGTTGTCCGGACCTGTGCC+TGG | + | tig0030761:27102-27121 | None:intergenic | 65.0% | |
| CAGGTCTCTACCCCTTGGCC+AGG | - | tig0030761:27205-27224 | Msa1444610:CDS | 65.0% | |
| ATCGGTTACGCCTGCGGTCC+TGG | + | tig0030761:27226-27245 | None:intergenic | 65.0% | |
| ! | GAGCCCTTCATGGGCTGAGG+TGG | - | tig0030761:27927-27946 | Msa1444610:intron | 65.0% |
| GGCCCACCTCAGCCCATGAA+GGG | + | tig0030761:27933-27952 | None:intergenic | 65.0% | |
| TGGCCCACCTCAGCCCATGA+AGG | + | tig0030761:27934-27953 | None:intergenic | 65.0% | |
| ! | TCATGGGCTGAGGTGGGCCA+CGG | - | tig0030761:27934-27953 | Msa1444610:intron | 65.0% |
| CAAGGACAAGGGGGTGGACG+AGG | - | tig0030761:29387-29406 | Msa1444610:intron | 65.0% | |
| TACCCCTTGGCCAGGACCGC+AGG | - | tig0030761:27213-27232 | Msa1444610:CDS | 70.0% | |
| ACGCCTGCGGTCCTGGCCAA+GGG | + | tig0030761:27219-27238 | None:intergenic | 70.0% | |
| TACGCCTGCGGTCCTGGCCA+AGG | + | tig0030761:27220-27239 | None:intergenic | 70.0% | |
| ! | GCGGAGCCCTTCATGGGCTG+AGG | - | tig0030761:27924-27943 | Msa1444610:intron | 70.0% |
| GGGTGGACGAGGTCGCCGAA+CGG | - | tig0030761:29398-29417 | Msa1444610:intron | 70.0% | |
| CGCCTGCGGTCCTGGCCAAG+GGG | + | tig0030761:27218-27237 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030761 | gene | 24525 | 29923 | 24525 | ID=Msa1444610;Name=Msa1444610 |
| tig0030761 | mRNA | 24525 | 29923 | 24525 | ID=Msa1444610-mRNA-1;Parent=Msa1444610;Name=Msa1444610-mRNA-1;_AED=0.25;_eAED=0.27;_QI=0|0.28|0.06|0.8|1|1|15|0|911 |
| tig0030761 | exon | 29903 | 29923 | 29903 | ID=Msa1444610-mRNA-1:exon:14588;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 28876 | 29031 | 28876 | ID=Msa1444610-mRNA-1:exon:14587;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 28591 | 28671 | 28591 | ID=Msa1444610-mRNA-1:exon:14586;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 28463 | 28507 | 28463 | ID=Msa1444610-mRNA-1:exon:14585;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 28037 | 28384 | 28037 | ID=Msa1444610-mRNA-1:exon:14584;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 27726 | 27914 | 27726 | ID=Msa1444610-mRNA-1:exon:14583;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 27391 | 27644 | 27391 | ID=Msa1444610-mRNA-1:exon:14582;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 27102 | 27240 | 27102 | ID=Msa1444610-mRNA-1:exon:14581;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 26503 | 26856 | 26503 | ID=Msa1444610-mRNA-1:exon:14580;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 26386 | 26415 | 26386 | ID=Msa1444610-mRNA-1:exon:14579;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 26266 | 26301 | 26266 | ID=Msa1444610-mRNA-1:exon:14578;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 25817 | 25921 | 25817 | ID=Msa1444610-mRNA-1:exon:14577;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 25612 | 25700 | 25612 | ID=Msa1444610-mRNA-1:exon:14576;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 25435 | 25519 | 25435 | ID=Msa1444610-mRNA-1:exon:14575;Parent=Msa1444610-mRNA-1 |
| tig0030761 | exon | 24525 | 25328 | 24525 | ID=Msa1444610-mRNA-1:exon:14574;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 29903 | 29923 | 29903 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 28876 | 29031 | 28876 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 28591 | 28671 | 28591 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 28463 | 28507 | 28463 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 28037 | 28384 | 28037 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 27726 | 27914 | 27726 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 27391 | 27644 | 27391 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 27102 | 27240 | 27102 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 26503 | 26856 | 26503 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 26386 | 26415 | 26386 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 26266 | 26301 | 26266 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 25817 | 25921 | 25817 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 25612 | 25700 | 25612 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 25435 | 25519 | 25435 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| tig0030761 | CDS | 24525 | 25328 | 24525 | ID=Msa1444610-mRNA-1:cds;Parent=Msa1444610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
