AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1444810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444810 MtrunA17_Chr2g0285371 94.262 122 7 0 15 136 45 166 9.30e-78 237
Msa1444810 MtrunA17_Chr2g0285351 91.870 123 9 1 15 136 44 166 6.16e-74 228
Msa1444810 MtrunA17_Chr2g0285381 81.967 122 22 0 15 136 48 169 2.04e-66 208
Msa1444810 MtrunA17_Chr3g0133011 69.841 126 34 1 15 136 65 190 1.36e-56 183
Msa1444810 MtrunA17_Chr4g0009671 62.500 128 46 2 15 141 16 142 1.60e-50 166
Msa1444810 MtrunA17_Chr4g0009701 63.281 128 45 2 15 141 51 177 3.46e-49 163
Msa1444810 MtrunA17_Chr4g0009681 60.938 128 48 2 15 141 48 174 2.34e-48 161
Msa1444810 MtrunA17_Chr4g0009721 60.317 126 48 2 15 139 47 171 3.23e-48 160
Msa1444810 MtrunA17_Chr4g0009661 60.156 128 49 2 15 141 51 177 1.28e-47 159
Msa1444810 MtrunA17_Chr4g0009651 60.976 123 46 2 15 136 51 172 6.70e-47 157
Msa1444810 MtrunA17_Chr4g0009711 59.375 128 50 2 15 141 51 177 1.20e-46 157
Msa1444810 MtrunA17_Chr3g0093971 48.361 122 62 1 15 136 38 158 6.22e-38 133
Msa1444810 MtrunA17_Chr2g0279371 49.138 116 56 1 21 136 33 145 9.80e-37 124
Msa1444810 MtrunA17_Chr7g0234051 45.000 120 66 0 15 134 41 160 6.74e-31 115
Msa1444810 MtrunA17_Chr8g0338461 45.082 122 67 0 15 136 42 163 1.16e-30 114
Msa1444810 MtrunA17_Chr4g0009641 48.438 128 40 3 15 141 51 153 9.50e-29 108
Msa1444810 MtrunA17_Chr7g0234041 42.276 123 70 1 15 136 38 160 3.25e-27 104
Msa1444810 MtrunA17_Chr7g0249431 40.336 119 69 2 20 136 44 162 4.61e-27 104
Msa1444810 MtrunA17_Chr4g0028271 34.746 118 71 1 21 138 100 211 4.59e-23 93.6
Msa1444810 MtrunA17_Chr2g0327401 37.288 118 69 3 21 138 103 215 1.44e-22 92.0
Msa1444810 MtrunA17_Chr4g0028281 32.203 118 74 1 21 138 98 209 3.38e-22 90.9
Msa1444810 MtrunA17_Chr2g0327381 37.815 119 68 3 21 138 97 210 4.26e-22 90.9
Msa1444810 MtrunA17_Chr4g0028241 33.051 118 73 1 21 138 92 203 9.98e-22 89.7
Msa1444810 MtrunA17_Chr4g0028261 33.898 118 72 1 21 138 121 232 1.52e-21 89.4
Msa1444810 MtrunA17_Chr1g0171411 33.051 118 73 1 21 138 86 197 1.70e-21 89.0
Msa1444810 MtrunA17_Chr8g0385871 41.026 117 60 4 20 134 49 158 9.50e-21 87.0
Msa1444810 MtrunA17_Chr1g0199171 33.051 118 72 2 21 138 93 203 3.16e-20 85.5
Msa1444810 MtrunA17_Chr4g0068841 35.714 126 73 5 12 134 46 166 4.15e-20 85.1
Msa1444810 MtrunA17_Chr2g0327371 39.394 99 55 2 33 131 98 191 4.84e-20 85.1
Msa1444810 MtrunA17_Chr4g0038311 37.607 117 67 3 20 134 50 162 8.70e-20 84.3
Msa1444810 MtrunA17_Chr3g0118861 38.462 104 58 2 20 122 92 190 1.47e-19 83.6
Msa1444810 MtrunA17_Chr1g0153931 39.583 96 52 2 20 114 92 182 1.87e-19 81.6
Msa1444810 MtrunA17_Chr3g0131731 42.000 100 50 3 20 118 47 139 1.93e-19 83.2
Msa1444810 MtrunA17_Chr3g0094811 38.938 113 58 4 9 117 32 137 2.14e-19 83.2
Msa1444810 MtrunA17_Chr1g0153881 43.158 95 48 2 20 113 106 195 3.31e-19 82.8
Msa1444810 MtrunA17_Chr3g0118881 36.752 117 67 3 20 134 94 205 7.01e-19 81.6
Msa1444810 MtrunA17_Chr2g0309541 39.450 109 55 4 20 126 55 154 9.46e-19 81.3
Msa1444810 MtrunA17_Chr4g0068861 35.338 133 69 6 12 133 92 218 1.21e-18 80.9
Msa1444810 MtrunA17_Chr7g0219051 33.333 135 76 4 11 136 39 168 1.81e-18 80.5
Msa1444810 MtrunA17_Chr2g0281621 34.426 122 73 3 20 139 51 167 2.35e-18 80.1
Msa1444810 MtrunA17_Chr4g0047861 31.429 140 88 4 5 139 51 187 3.50e-18 79.7
Msa1444810 MtrunA17_Chr3g0118831 35.043 117 69 3 20 134 94 205 5.31e-18 79.0
Msa1444810 MtrunA17_Chr2g0309511 38.182 110 56 4 20 122 56 160 7.94e-18 78.6
Msa1444810 MtrunA17_Chr3g0118891 34.074 135 70 4 20 140 94 223 8.30e-18 78.6
Msa1444810 MtrunA17_Chr3g0118851 35.897 117 68 3 20 134 94 205 9.78e-18 78.6
Msa1444810 MtrunA17_Chr1g0153941 38.947 95 52 2 20 113 94 183 1.41e-17 77.8
Msa1444810 MtrunA17_Chr2g0304931 33.871 124 67 4 11 129 41 154 1.98e-17 77.4
Msa1444810 MtrunA17_Chr2g0318911 37.931 116 58 5 20 126 57 167 2.27e-17 77.4
Msa1444810 MtrunA17_Chr3g0118841 34.188 117 70 3 20 134 95 206 3.56e-17 76.6
Msa1444810 MtrunA17_Chr5g0431301 32.203 118 74 2 20 136 45 157 4.10e-17 76.6
Msa1444810 MtrunA17_Chr1g0199991 36.735 98 54 3 20 114 49 141 4.68e-17 76.3
Msa1444810 MtrunA17_Chr7g0221551 36.364 99 55 2 20 117 46 137 4.87e-17 76.3
Msa1444810 MtrunA17_Chr1g0165811 33.077 130 70 5 3 128 26 142 6.17e-17 74.7
Msa1444810 MtrunA17_Chr3g0126031 33.594 128 79 2 12 138 36 158 6.37e-17 75.9
Msa1444810 MtrunA17_Chr2g0309521 35.455 110 59 4 20 122 56 160 2.50e-16 74.3
Msa1444810 MtrunA17_Chr3g0126051 33.019 106 65 2 20 124 49 149 3.63e-16 73.9
Msa1444810 MtrunA17_Chr1g0199971 33.036 112 63 4 10 114 35 141 6.52e-16 73.2
Msa1444810 MtrunA17_Chr3g0090331 32.432 111 66 3 11 117 78 183 3.07e-15 71.2
Msa1444810 MtrunA17_Chr4g0020241 34.694 98 58 2 21 117 90 182 3.35e-15 71.2
Msa1444810 MtrunA17_Chr1g0204191 33.028 109 61 3 20 127 107 204 3.66e-14 68.2
Msa1444810 MtrunA17_Chr4g0044051 31.776 107 64 3 11 114 38 138 1.85e-12 63.2
Msa1444810 MtrunA17_Chr5g0447441 29.464 112 66 3 8 114 31 134 1.53e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444810 AT5G36180.1 63.115 122 45 0 15 136 44 165 2.04e-50 166
Msa1444810 AT1G73290.2 59.016 122 50 0 15 136 43 164 1.20e-49 161
Msa1444810 AT1G73300.1 60.656 122 48 0 15 136 44 165 2.66e-49 163
Msa1444810 AT1G73300.2 60.656 122 48 0 15 136 44 165 2.66e-49 163
Msa1444810 AT1G73270.2 61.475 122 47 0 15 136 44 165 1.96e-48 161
Msa1444810 AT1G73270.1 61.475 122 47 0 15 136 44 165 2.17e-48 161
Msa1444810 AT1G73290.3 59.016 122 50 0 15 136 43 164 2.22e-48 160
Msa1444810 AT1G73310.2 59.836 122 49 0 15 136 44 165 3.60e-48 160
Msa1444810 AT1G73290.1 59.016 122 50 0 15 136 43 164 3.65e-48 160
Msa1444810 AT1G73310.1 59.836 122 49 0 15 136 44 165 4.98e-48 160
Msa1444810 AT1G73280.2 59.016 122 50 0 15 136 44 165 6.46e-48 158
Msa1444810 AT3G10450.4 59.836 122 49 0 15 136 40 161 1.55e-47 158
Msa1444810 AT1G73280.1 59.016 122 50 0 15 136 44 165 3.18e-47 158
Msa1444810 AT3G10450.1 59.836 122 49 0 15 136 40 161 3.46e-47 158
Msa1444810 AT2G22970.2 56.557 122 53 0 15 136 36 157 7.58e-47 154
Msa1444810 AT2G22920.4 56.557 122 53 0 15 136 36 157 1.27e-46 153
Msa1444810 AT2G22970.4 56.557 122 53 0 15 136 36 157 4.39e-46 154
Msa1444810 AT1G33540.1 59.836 122 49 0 15 136 40 161 6.37e-46 155
Msa1444810 AT2G22970.3 56.557 122 53 0 15 136 36 157 6.45e-46 154
Msa1444810 AT2G22980.2 57.377 122 52 0 15 136 37 158 6.67e-46 154
Msa1444810 AT2G22970.1 56.557 122 53 0 15 136 36 157 7.00e-46 154
Msa1444810 AT2G22920.1 56.557 122 53 0 15 136 36 157 7.95e-46 154
Msa1444810 AT2G22920.2 56.557 122 53 0 15 136 36 157 1.06e-45 154
Msa1444810 AT2G22980.1 57.377 122 52 0 15 136 37 158 1.09e-45 154
Msa1444810 AT2G22980.4 57.377 122 52 0 15 136 37 158 1.12e-45 154
Msa1444810 AT2G23000.1 57.258 124 52 1 13 136 34 156 1.67e-45 153
Msa1444810 AT2G23000.2 57.258 124 52 1 13 136 34 156 1.67e-45 153
Msa1444810 AT2G23010.2 56.557 122 52 1 15 136 36 156 6.58e-45 152
Msa1444810 AT2G23010.1 56.557 122 52 1 15 136 36 156 7.71e-45 152
Msa1444810 AT2G22980.3 57.258 124 51 1 15 136 37 160 8.72e-45 150
Msa1444810 AT3G10450.3 59.130 115 47 0 22 136 4 118 1.20e-44 150
Msa1444810 AT3G10450.2 59.130 115 47 0 22 136 4 118 1.89e-44 150
Msa1444810 AT3G12240.1 56.557 122 53 0 15 136 39 160 5.18e-44 149
Msa1444810 AT5G09640.1 49.606 127 64 0 15 141 38 164 2.10e-43 148
Msa1444810 AT3G12220.3 55.738 122 54 0 15 136 38 159 2.46e-43 147
Msa1444810 AT1G33540.2 59.130 115 47 0 22 136 4 118 3.57e-43 147
Msa1444810 AT3G12220.1 55.738 122 54 0 15 136 38 159 7.98e-43 146
Msa1444810 AT2G22990.4 54.098 122 55 1 15 136 34 154 3.29e-41 142
Msa1444810 AT2G22990.1 54.098 122 55 1 15 136 34 154 4.04e-41 142
Msa1444810 AT3G12230.1 51.639 122 59 0 15 136 38 159 4.40e-41 142
Msa1444810 AT2G22990.3 54.098 122 55 1 15 136 34 154 5.02e-41 142
Msa1444810 AT3G12203.3 52.459 122 58 0 15 136 20 141 1.71e-40 140
Msa1444810 AT3G12203.1 52.459 122 58 0 15 136 41 162 3.30e-40 139
Msa1444810 AT3G12220.2 54.783 115 52 0 22 136 15 129 6.58e-40 138
Msa1444810 AT2G22990.5 50.820 122 50 2 15 136 34 145 1.05e-34 125
Msa1444810 AT3G12203.2 50.000 104 52 0 33 136 1 104 2.82e-32 117
Msa1444810 AT4G12910.2 45.082 122 67 0 15 136 46 167 2.39e-30 113
Msa1444810 AT4G12910.1 45.082 122 67 0 15 136 46 167 3.24e-30 113
Msa1444810 AT3G25420.1 40.000 120 70 1 15 134 41 158 7.69e-27 104
Msa1444810 AT1G28110.1 42.056 107 54 2 12 117 39 138 6.26e-22 90.5
Msa1444810 AT1G28110.2 42.056 107 54 2 12 117 39 138 6.26e-22 90.5
Msa1444810 AT5G22980.1 35.938 128 71 3 15 138 91 211 1.06e-21 90.1
Msa1444810 AT3G52020.1 41.818 110 56 2 11 117 83 187 4.47e-21 88.2
Msa1444810 AT5G23210.3 36.752 117 68 3 20 134 67 179 1.72e-20 86.7
Msa1444810 AT5G23210.1 36.752 117 68 3 20 134 67 179 2.28e-20 86.3
Msa1444810 AT2G33530.1 37.692 130 72 4 12 139 41 163 4.57e-20 85.5
Msa1444810 AT3G45010.1 34.884 129 73 4 14 138 93 214 8.81e-20 84.7
Msa1444810 AT3G56540.1 35.455 110 63 2 11 117 83 187 1.11e-19 82.4
Msa1444810 AT3G10410.1 33.333 120 73 2 19 138 100 212 1.25e-19 84.3
Msa1444810 AT3G52000.1 32.456 114 72 1 21 134 81 189 1.10e-18 81.6
Msa1444810 AT4G30810.1 36.538 104 60 2 20 122 54 152 2.59e-18 80.5
Msa1444810 AT1G43780.1 35.593 118 70 2 20 136 53 165 4.46e-18 79.7
Msa1444810 AT3G63470.1 36.735 98 56 2 21 117 98 190 7.59e-18 79.0
Msa1444810 AT5G42230.1 34.091 132 78 3 11 138 32 158 9.33e-18 79.0
Msa1444810 AT5G42230.2 34.091 132 78 3 11 138 32 158 9.33e-18 79.0
Msa1444810 AT1G11080.1 35.897 117 68 4 20 134 66 177 1.23e-17 78.6
Msa1444810 AT1G11080.2 35.897 117 68 4 20 134 66 177 1.31e-17 78.6
Msa1444810 AT2G12480.4 35.593 118 70 2 20 136 47 159 1.84e-17 77.8
Msa1444810 AT2G12480.1 35.593 118 70 2 20 136 47 159 1.93e-17 77.8
Msa1444810 AT2G12480.2 35.593 118 70 2 20 136 47 159 2.01e-17 77.8
Msa1444810 AT2G12480.3 35.593 118 70 2 20 136 47 159 2.17e-17 77.8
Msa1444810 AT3G17180.2 31.496 127 78 6 12 134 46 167 5.23e-17 76.6
Msa1444810 AT3G17180.1 31.496 127 78 6 12 134 46 167 6.41e-17 76.6
Msa1444810 AT5G42240.1 33.846 130 77 3 11 136 36 160 9.97e-17 75.9
Msa1444810 AT2G24010.1 39.423 104 57 3 20 122 46 144 1.47e-16 75.5
Msa1444810 AT4G15100.1 38.384 99 55 2 20 117 60 153 1.49e-16 75.5
Msa1444810 AT3G52010.1 37.234 94 54 2 21 114 82 170 1.99e-16 75.1
Msa1444810 AT3G02110.1 33.333 135 71 5 20 140 53 182 2.11e-16 75.1
Msa1444810 AT2G24000.1 38.182 110 56 4 20 122 46 150 2.77e-16 74.7
Msa1444810 AT4G30610.1 36.283 113 65 4 12 122 40 147 3.50e-16 74.3
Msa1444810 AT3G07990.1 34.211 114 63 4 11 117 37 145 5.82e-16 73.6
Msa1444810 AT1G61130.1 31.967 122 76 3 20 139 47 163 6.50e-16 73.6
Msa1444810 AT5G08260.1 38.144 97 53 4 20 114 55 146 9.00e-16 73.2
Msa1444810 AT2G35780.1 36.634 101 56 3 20 117 46 141 1.09e-15 72.8
Msa1444810 AT2G05850.1 31.387 137 72 4 21 140 81 212 1.19e-15 72.8
Msa1444810 AT2G35770.1 35.354 99 58 2 20 117 54 147 1.35e-14 69.7
Msa1444810 AT5G36180.2 49.206 63 32 0 74 136 1 63 6.14e-14 67.4
Msa1444810 AT5G36180.5 49.206 63 32 0 74 136 1 63 6.42e-14 67.4
Msa1444810 AT5G36180.3 49.206 63 32 0 74 136 1 63 6.42e-14 67.4
Msa1444810 AT5G36180.4 49.206 63 32 0 74 136 1 63 7.16e-14 67.4
Msa1444810 AT5G22960.1 26.056 142 75 4 1 138 14 129 1.12e-13 65.1
Msa1444810 AT1G73310.3 46.032 63 34 0 74 136 1 63 1.24e-12 63.9
Msa1444810 AT1G73280.4 46.032 63 34 0 74 136 1 63 2.36e-12 63.2
Msa1444810 AT2G24010.4 33.613 119 58 4 20 122 17 130 4.20e-12 62.4
Msa1444810 AT2G24010.3 33.613 119 58 4 20 122 17 130 5.34e-12 62.4
Msa1444810 AT2G24010.2 33.613 119 58 4 20 122 46 159 5.40e-12 62.4
Msa1444810 AT1G15000.1 30.693 101 62 2 19 116 36 131 3.86e-11 60.1

Find 52 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTACTAAATATGAAAATT+TGG 0.172062 tig0030831:-4955 Msa1444810:intergenic
TTAATTCTAGTGAAGAAAAT+TGG 0.229437 tig0030831:+6745 Msa1444810:three_prime_UTR
ACAAAGTTTAGTTCAACTTA+TGG 0.250544 tig0030831:+5073 Msa1444810:five_prime_UTR
AAATTTGTCATAAATATAAA+TGG 0.320056 tig0030831:+4881 Msa1444810:five_prime_UTR
TATTATATTTGTAGATTTGC+CGG 0.329137 tig0030831:+6542 Msa1444810:CDS
ACCCCTTCCGTGCTTGAAAC+CGG 0.348122 tig0030831:+5192 Msa1444810:CDS
CAAAGTTTAGTTCAACTTAT+GGG 0.357058 tig0030831:+5074 Msa1444810:five_prime_UTR
AGGATGATCCTCTCATACTA+TGG 0.360528 tig0030831:+5364 Msa1444810:CDS
CCTGGTTGCTCTGCTTTGTC+TGG 0.360578 tig0030831:+5399 Msa1444810:CDS
TCTATAGTGAAGTTTCTTCC+TGG 0.395633 tig0030831:+5160 Msa1444810:CDS
TGATCTTGAGGCAACATTCA+TGG 0.408972 tig0030831:+6378 Msa1444810:CDS
ATATTTGTTGTTAAGGTATG+TGG 0.432299 tig0030831:+5278 Msa1444810:intron
ACCAAGTTCATCAATTTCTC+AGG 0.441699 tig0030831:+6631 Msa1444810:CDS
AGTATGAGAGGATCATCCTT+TGG 0.453644 tig0030831:-5360 Msa1444810:intergenic
TAAGTGAAGCCTGTGGAAAC+CGG 0.454907 tig0030831:-6561 Msa1444810:intergenic
TTGTTAAGGTATGTGGGAGT+GGG 0.461457 tig0030831:+5285 Msa1444810:intron
GTTGTTAAGGTATGTGGGAG+TGG 0.467038 tig0030831:+5284 Msa1444810:intron
AATTACCAATTTCAAGCAAA+AGG 0.467732 tig0030831:-5422 Msa1444810:intergenic
ATGTACACGTGAGTATATAT+AGG 0.469154 tig0030831:+6810 Msa1444810:three_prime_UTR
TCAAGCACGGAAGGGGTCCT+TGG 0.473247 tig0030831:-5186 Msa1444810:intergenic
TGTTGCCTCAAGATCAGATT+AGG 0.476145 tig0030831:-6371 Msa1444810:intergenic
CTATGGCTCACTGGTGGACC+TGG 0.476423 tig0030831:+5381 Msa1444810:CDS
GGAAGGGGTCCTTGGAATCC+AGG 0.479911 tig0030831:-5178 Msa1444810:intergenic
TCCTGAGAAATTGATGAACT+TGG 0.480271 tig0030831:-6632 Msa1444810:intergenic
CCCCTTCCGTGCTTGAAACC+GGG 0.480498 tig0030831:+5193 Msa1444810:CDS
TATTTGTTGTTAAGGTATGT+GGG 0.503693 tig0030831:+5279 Msa1444810:intron
ACTTATGCCACAGCAGAATC+CGG 0.506910 tig0030831:+6579 Msa1444810:CDS
AAGTTTCTTCCTGGATTCCA+AGG 0.510461 tig0030831:+5169 Msa1444810:CDS
GTAGATTTGCCGGTTTCCAC+AGG 0.511485 tig0030831:+6552 Msa1444810:CDS
TGCTTTCAAGTTGCAACATG+TGG 0.513785 tig0030831:+5136 Msa1444810:exon
CCTCTCATACTATGGCTCAC+TGG 0.524416 tig0030831:+5372 Msa1444810:CDS
GTAAATCAGTCAATAACTGT+TGG 0.531563 tig0030831:+6714 Msa1444810:three_prime_UTR
CCCGGTTTCAAGCACGGAAG+GGG 0.543091 tig0030831:-5193 Msa1444810:intergenic
AACCCGGTTTCAAGCACGGA+AGG 0.559782 tig0030831:-5195 Msa1444810:intergenic
ATATATAGGATCGTTTCCAC+AGG 0.561968 tig0030831:+6824 Msa1444810:three_prime_UTR
GTTTAGTTCAACTTATGGGA+AGG 0.563304 tig0030831:+5078 Msa1444810:five_prime_UTR
CCAGACAAAGCAGAGCAACC+AGG 0.565074 tig0030831:-5399 Msa1444810:intergenic
CTCATACTATGGCTCACTGG+TGG 0.567761 tig0030831:+5375 Msa1444810:CDS
AACTAACCCGGTTTCAAGCA+CGG 0.567790 tig0030831:-5199 Msa1444810:intergenic
AGTTCATCAATTTCTCAGGA+AGG 0.588723 tig0030831:+6635 Msa1444810:CDS
TACATAGTTATATGACGTGT+AGG 0.594963 tig0030831:-6792 Msa1444810:intergenic
TTTAGCACCGGATTCTGCTG+TGG 0.596870 tig0030831:-6586 Msa1444810:intergenic
GTCTACCTAATCTGATCTTG+AGG 0.598449 tig0030831:+6366 Msa1444810:CDS
ACCCGGTTTCAAGCACGGAA+GGG 0.603285 tig0030831:-5194 Msa1444810:intergenic
CCAGTGAGCCATAGTATGAG+AGG 0.603687 tig0030831:-5372 Msa1444810:intergenic
TGAATCGCTTCGTTTAGCAC+CGG 0.613421 tig0030831:-6598 Msa1444810:intergenic
TGATTAAACGTAACTCCCTG+TGG 0.658947 tig0030831:-6840 Msa1444810:intergenic
TGAATCAGAGAAGAATCCAA+AGG 0.659518 tig0030831:+5344 Msa1444810:CDS
GAGGCAACATTCATGGACAA+AGG 0.660602 tig0030831:+6385 Msa1444810:CDS
TATATAGGATCGTTTCCACA+GGG 0.699585 tig0030831:+6825 Msa1444810:three_prime_UTR
GTGTCAAGAACAATATTGAG+TGG 0.725137 tig0030831:+4913 Msa1444810:five_prime_UTR
TGTGGCATAAGTGAAGCCTG+TGG 0.758304 tig0030831:-6568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGTCATAAATATAAA+TGG + tig0030831:4881-4900 Msa1444810:five_prime_UTR 10.0%
!!! AGTTTTTTTTTAATCTATTA+TGG + tig0030831:5234-5253 Msa1444810:intron 10.0%
!! ATATTTAGTTATTATATGAT+AGG - tig0030831:5649-5668 Msa1444810:intergenic 10.0%
!! ATATAAATACATGATTTAAA+AGG - tig0030831:6483-6502 Msa1444810:intergenic 10.0%
!! AAATTTGTCATAAATATAAA+TGG + tig0030831:4881-4900 Msa1444810:five_prime_UTR 10.0%
!!! AGTTTTTTTTTAATCTATTA+TGG + tig0030831:5234-5253 Msa1444810:intron 10.0%
!! ATATTTAGTTATTATATGAT+AGG - tig0030831:5649-5668 Msa1444810:intergenic 10.0%
!! ATATAAATACATGATTTAAA+AGG - tig0030831:6483-6502 Msa1444810:intergenic 10.0%
!! TACTACTAAATATGAAAATT+TGG - tig0030831:4958-4977 Msa1444810:intergenic 15.0%
!!! CATTTATTTTATGAATCAAT+GGG - tig0030831:5830-5849 Msa1444810:intergenic 15.0%
!!! ACATTTATTTTATGAATCAA+TGG - tig0030831:5831-5850 Msa1444810:intergenic 15.0%
!! TAAATCATGTATTTATATAC+TGG + tig0030831:6485-6504 Msa1444810:intron 15.0%
!!! TATTTATAAGATTTTTTCCT+TGG + tig0030831:6508-6527 Msa1444810:intron 15.0%
!! TACTACTAAATATGAAAATT+TGG - tig0030831:4958-4977 Msa1444810:intergenic 15.0%
!!! CATTTATTTTATGAATCAAT+GGG - tig0030831:5830-5849 Msa1444810:intergenic 15.0%
!!! ACATTTATTTTATGAATCAA+TGG - tig0030831:5831-5850 Msa1444810:intergenic 15.0%
!! TAAATCATGTATTTATATAC+TGG + tig0030831:6485-6504 Msa1444810:intron 15.0%
!!! TATTTATAAGATTTTTTCCT+TGG + tig0030831:6508-6527 Msa1444810:intron 15.0%
!!! CATATTCATATTTGTTGTTA+AGG + tig0030831:5271-5290 Msa1444810:intron 20.0%
!! TTAACCAAAAGTGAAAAATT+TGG - tig0030831:5530-5549 Msa1444810:intergenic 20.0%
!! TGTTTCTTAGTTATTAAACT+GGG - tig0030831:5975-5994 Msa1444810:intergenic 20.0%
!!! TTGTTTCTTAGTTATTAAAC+TGG - tig0030831:5976-5995 Msa1444810:intergenic 20.0%
!! TAGATATAATTCATCTTTGT+AGG + tig0030831:6199-6218 Msa1444810:intron 20.0%
!! AAGACATTCAAATCAAAATT+AGG + tig0030831:6223-6242 Msa1444810:intron 20.0%
!! GATCAAATTGTAAATGTTAT+AGG + tig0030831:6308-6327 Msa1444810:intron 20.0%
!! ACTATGGATAACAAAAAATA+TGG - tig0030831:6424-6443 Msa1444810:intergenic 20.0%
!!! TTATCCATAGTTAGATTTTT+CGG + tig0030831:6433-6452 Msa1444810:intron 20.0%
!! TATTATATTTGTAGATTTGC+CGG + tig0030831:6542-6561 Msa1444810:CDS 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + tig0030831:6745-6764 Msa1444810:three_prime_UTR 20.0%
!!! CATATTCATATTTGTTGTTA+AGG + tig0030831:5271-5290 Msa1444810:intron 20.0%
!! TTAACCAAAAGTGAAAAATT+TGG - tig0030831:5530-5549 Msa1444810:intergenic 20.0%
!! TGTTTCTTAGTTATTAAACT+GGG - tig0030831:5975-5994 Msa1444810:intergenic 20.0%
!!! TTGTTTCTTAGTTATTAAAC+TGG - tig0030831:5976-5995 Msa1444810:intergenic 20.0%
!! TAGATATAATTCATCTTTGT+AGG + tig0030831:6199-6218 Msa1444810:intron 20.0%
!! AAGACATTCAAATCAAAATT+AGG + tig0030831:6223-6242 Msa1444810:intron 20.0%
!! GATCAAATTGTAAATGTTAT+AGG + tig0030831:6308-6327 Msa1444810:intron 20.0%
!! ACTATGGATAACAAAAAATA+TGG - tig0030831:6424-6443 Msa1444810:intergenic 20.0%
!!! TTATCCATAGTTAGATTTTT+CGG + tig0030831:6433-6452 Msa1444810:intron 20.0%
!! TATTATATTTGTAGATTTGC+CGG + tig0030831:6542-6561 Msa1444810:CDS 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + tig0030831:6745-6764 Msa1444810:three_prime_UTR 20.0%
! AGTACTCATAAAGAAAAAGA+GGG + tig0030831:5029-5048 Msa1444810:five_prime_UTR 25.0%
!! ACAAAGTTTAGTTCAACTTA+TGG + tig0030831:5073-5092 Msa1444810:five_prime_UTR 25.0%
!! CAAAGTTTAGTTCAACTTAT+GGG + tig0030831:5074-5093 Msa1444810:five_prime_UTR 25.0%
!!! ATATTTGTTGTTAAGGTATG+TGG + tig0030831:5278-5297 Msa1444810:intron 25.0%
!!! TATTTGTTGTTAAGGTATGT+GGG + tig0030831:5279-5298 Msa1444810:intron 25.0%
! AATTACCAATTTCAAGCAAA+AGG - tig0030831:5425-5444 Msa1444810:intergenic 25.0%
!! CTTTCCAAATTTTTCACTTT+TGG + tig0030831:5523-5542 Msa1444810:intron 25.0%
!!! GATAAGCATTTGAAATTTTG+TGG + tig0030831:5556-5575 Msa1444810:intron 25.0%
! TTAGGAAAGATCATTTCATA+CGG - tig0030831:5786-5805 Msa1444810:intergenic 25.0%
!! TTTGTAGACTTTTGTGTTTT+AGG - tig0030831:5804-5823 Msa1444810:intergenic 25.0%
!! AAACAGAAACATTTTCTCAA+AGG + tig0030831:6046-6065 Msa1444810:intron 25.0%
! TCTTTGTTACTAAATGTTCA+TGG + tig0030831:6109-6128 Msa1444810:intron 25.0%
! AAATCTTCACCAACTATATA+GGG - tig0030831:6178-6197 Msa1444810:intergenic 25.0%
! TTAAAAAAGGAGGAATACAA+TGG + tig0030831:6341-6360 Msa1444810:CDS 25.0%
! TAAAAAAGGAGGAATACAAT+GGG + tig0030831:6342-6361 Msa1444810:CDS 25.0%
! AAAACCGAAAAATCTAACTA+TGG - tig0030831:6440-6459 Msa1444810:intergenic 25.0%
! AGTACTCATAAAGAAAAAGA+GGG + tig0030831:5029-5048 Msa1444810:five_prime_UTR 25.0%
!! ACAAAGTTTAGTTCAACTTA+TGG + tig0030831:5073-5092 Msa1444810:five_prime_UTR 25.0%
!! CAAAGTTTAGTTCAACTTAT+GGG + tig0030831:5074-5093 Msa1444810:five_prime_UTR 25.0%
!!! ATATTTGTTGTTAAGGTATG+TGG + tig0030831:5278-5297 Msa1444810:intron 25.0%
!!! TATTTGTTGTTAAGGTATGT+GGG + tig0030831:5279-5298 Msa1444810:intron 25.0%
! AATTACCAATTTCAAGCAAA+AGG - tig0030831:5425-5444 Msa1444810:intergenic 25.0%
!! CTTTCCAAATTTTTCACTTT+TGG + tig0030831:5523-5542 Msa1444810:intron 25.0%
!!! GATAAGCATTTGAAATTTTG+TGG + tig0030831:5556-5575 Msa1444810:intron 25.0%
! TTAGGAAAGATCATTTCATA+CGG - tig0030831:5786-5805 Msa1444810:intergenic 25.0%
!! TTTGTAGACTTTTGTGTTTT+AGG - tig0030831:5804-5823 Msa1444810:intergenic 25.0%
!! AAACAGAAACATTTTCTCAA+AGG + tig0030831:6046-6065 Msa1444810:intron 25.0%
! TCTTTGTTACTAAATGTTCA+TGG + tig0030831:6109-6128 Msa1444810:intron 25.0%
! AAATCTTCACCAACTATATA+GGG - tig0030831:6178-6197 Msa1444810:intergenic 25.0%
! TTAAAAAAGGAGGAATACAA+TGG + tig0030831:6341-6360 Msa1444810:CDS 25.0%
! TAAAAAAGGAGGAATACAAT+GGG + tig0030831:6342-6361 Msa1444810:CDS 25.0%
! AAAACCGAAAAATCTAACTA+TGG - tig0030831:6440-6459 Msa1444810:intergenic 25.0%
GAGTACTCATAAAGAAAAAG+AGG + tig0030831:5028-5047 Msa1444810:five_prime_UTR 30.0%
AACAATCATTTGGTCTCAAT+TGG + tig0030831:5486-5505 Msa1444810:intron 30.0%
!! TAGTGGATTATGTTAGTTTC+TGG + tig0030831:5918-5937 Msa1444810:intron 30.0%
!! AGTGGATTATGTTAGTTTCT+GGG + tig0030831:5919-5938 Msa1444810:intron 30.0%
CAACTATATAGGGCTTAATT+AGG - tig0030831:6168-6187 Msa1444810:intergenic 30.0%
CTAATTAAGCCCTATATAGT+TGG + tig0030831:6166-6185 Msa1444810:intron 30.0%
GAAATCTTCACCAACTATAT+AGG - tig0030831:6179-6198 Msa1444810:intergenic 30.0%
!!! TATAAGATTTTTTCCTTGGC+AGG + tig0030831:6512-6531 Msa1444810:intron 30.0%
GTAAATCAGTCAATAACTGT+TGG + tig0030831:6714-6733 Msa1444810:three_prime_UTR 30.0%
TACATAGTTATATGACGTGT+AGG - tig0030831:6795-6814 Msa1444810:intergenic 30.0%
ATGTACACGTGAGTATATAT+AGG + tig0030831:6810-6829 Msa1444810:three_prime_UTR 30.0%
GAGTACTCATAAAGAAAAAG+AGG + tig0030831:5028-5047 Msa1444810:five_prime_UTR 30.0%
AACAATCATTTGGTCTCAAT+TGG + tig0030831:5486-5505 Msa1444810:intron 30.0%
!! TAGTGGATTATGTTAGTTTC+TGG + tig0030831:5918-5937 Msa1444810:intron 30.0%
!! AGTGGATTATGTTAGTTTCT+GGG + tig0030831:5919-5938 Msa1444810:intron 30.0%
CAACTATATAGGGCTTAATT+AGG - tig0030831:6168-6187 Msa1444810:intergenic 30.0%
CTAATTAAGCCCTATATAGT+TGG + tig0030831:6166-6185 Msa1444810:intron 30.0%
GAAATCTTCACCAACTATAT+AGG - tig0030831:6179-6198 Msa1444810:intergenic 30.0%
!!! TATAAGATTTTTTCCTTGGC+AGG + tig0030831:6512-6531 Msa1444810:intron 30.0%
GTAAATCAGTCAATAACTGT+TGG + tig0030831:6714-6733 Msa1444810:three_prime_UTR 30.0%
TACATAGTTATATGACGTGT+AGG - tig0030831:6795-6814 Msa1444810:intergenic 30.0%
ATGTACACGTGAGTATATAT+AGG + tig0030831:6810-6829 Msa1444810:three_prime_UTR 30.0%
GTGTCAAGAACAATATTGAG+TGG + tig0030831:4913-4932 Msa1444810:five_prime_UTR 35.0%
ACTCATAAAGAAAAAGAGGG+TGG + tig0030831:5032-5051 Msa1444810:five_prime_UTR 35.0%
! GTTTAGTTCAACTTATGGGA+AGG + tig0030831:5078-5097 Msa1444810:five_prime_UTR 35.0%
TCTATAGTGAAGTTTCTTCC+TGG + tig0030831:5160-5179 Msa1444810:CDS 35.0%
TGAATCAGAGAAGAATCCAA+AGG + tig0030831:5344-5363 Msa1444810:CDS 35.0%
! GGTAATTGCAGCTTTACTTT+TGG + tig0030831:5438-5457 Msa1444810:intron 35.0%
GCATTGAGCAAACAATCATT+TGG + tig0030831:5476-5495 Msa1444810:intron 35.0%
GTACAATCTCTCAATGTTAG+TGG + tig0030831:5901-5920 Msa1444810:intron 35.0%
AGGTCCACTTGAGTTAAAAA+AGG + tig0030831:6328-6347 Msa1444810:intron 35.0%
TCCACTTGAGTTAAAAAAGG+AGG + tig0030831:6331-6350 Msa1444810:CDS 35.0%
!!! TCCTCCTTTTTTAACTCAAG+TGG - tig0030831:6335-6354 Msa1444810:intergenic 35.0%
ACCAAGTTCATCAATTTCTC+AGG + tig0030831:6631-6650 Msa1444810:CDS 35.0%
TCCTGAGAAATTGATGAACT+TGG - tig0030831:6635-6654 Msa1444810:intergenic 35.0%
AGTTCATCAATTTCTCAGGA+AGG + tig0030831:6635-6654 Msa1444810:CDS 35.0%
ATATATAGGATCGTTTCCAC+AGG + tig0030831:6824-6843 Msa1444810:three_prime_UTR 35.0%
TATATAGGATCGTTTCCACA+GGG + tig0030831:6825-6844 Msa1444810:three_prime_UTR 35.0%
GTGTCAAGAACAATATTGAG+TGG + tig0030831:4913-4932 Msa1444810:five_prime_UTR 35.0%
ACTCATAAAGAAAAAGAGGG+TGG + tig0030831:5032-5051 Msa1444810:five_prime_UTR 35.0%
! GTTTAGTTCAACTTATGGGA+AGG + tig0030831:5078-5097 Msa1444810:five_prime_UTR 35.0%
TCTATAGTGAAGTTTCTTCC+TGG + tig0030831:5160-5179 Msa1444810:CDS 35.0%
TGAATCAGAGAAGAATCCAA+AGG + tig0030831:5344-5363 Msa1444810:CDS 35.0%
! GGTAATTGCAGCTTTACTTT+TGG + tig0030831:5438-5457 Msa1444810:intron 35.0%
GCATTGAGCAAACAATCATT+TGG + tig0030831:5476-5495 Msa1444810:intron 35.0%
GTACAATCTCTCAATGTTAG+TGG + tig0030831:5901-5920 Msa1444810:intron 35.0%
AGGTCCACTTGAGTTAAAAA+AGG + tig0030831:6328-6347 Msa1444810:intron 35.0%
TCCACTTGAGTTAAAAAAGG+AGG + tig0030831:6331-6350 Msa1444810:CDS 35.0%
!!! TCCTCCTTTTTTAACTCAAG+TGG - tig0030831:6335-6354 Msa1444810:intergenic 35.0%
ACCAAGTTCATCAATTTCTC+AGG + tig0030831:6631-6650 Msa1444810:CDS 35.0%
TCCTGAGAAATTGATGAACT+TGG - tig0030831:6635-6654 Msa1444810:intergenic 35.0%
AGTTCATCAATTTCTCAGGA+AGG + tig0030831:6635-6654 Msa1444810:CDS 35.0%
ATATATAGGATCGTTTCCAC+AGG + tig0030831:6824-6843 Msa1444810:three_prime_UTR 35.0%
TATATAGGATCGTTTCCACA+GGG + tig0030831:6825-6844 Msa1444810:three_prime_UTR 35.0%
!! TGCTTTCAAGTTGCAACATG+TGG + tig0030831:5136-5155 Msa1444810:exon 40.0%
AAGTTTCTTCCTGGATTCCA+AGG + tig0030831:5169-5188 Msa1444810:CDS 40.0%
TGTAAAGCCATGAACTAACC+CGG - tig0030831:5214-5233 Msa1444810:intergenic 40.0%
TTGTTAAGGTATGTGGGAGT+GGG + tig0030831:5285-5304 Msa1444810:intron 40.0%
AGTATGAGAGGATCATCCTT+TGG - tig0030831:5363-5382 Msa1444810:intergenic 40.0%
AGGATGATCCTCTCATACTA+TGG + tig0030831:5364-5383 Msa1444810:CDS 40.0%
!! TCTGGCCTTTTGCTTGAAAT+TGG + tig0030831:5417-5436 Msa1444810:CDS 40.0%
GTCTACCTAATCTGATCTTG+AGG + tig0030831:6366-6385 Msa1444810:CDS 40.0%
TGTTGCCTCAAGATCAGATT+AGG - tig0030831:6374-6393 Msa1444810:intergenic 40.0%
TGATCTTGAGGCAACATTCA+TGG + tig0030831:6378-6397 Msa1444810:CDS 40.0%
CAACATTCATGGACAAAGGT+GGG + tig0030831:6389-6408 Msa1444810:intron 40.0%
AACATTCATGGACAAAGGTG+GGG + tig0030831:6390-6409 Msa1444810:intron 40.0%
ATAATACTACTCACCTGCCA+AGG - tig0030831:6528-6547 Msa1444810:intergenic 40.0%
TGATTAAACGTAACTCCCTG+TGG - tig0030831:6843-6862 Msa1444810:intergenic 40.0%
!! TGCTTTCAAGTTGCAACATG+TGG + tig0030831:5136-5155 Msa1444810:exon 40.0%
AAGTTTCTTCCTGGATTCCA+AGG + tig0030831:5169-5188 Msa1444810:CDS 40.0%
TGTAAAGCCATGAACTAACC+CGG - tig0030831:5214-5233 Msa1444810:intergenic 40.0%
TTGTTAAGGTATGTGGGAGT+GGG + tig0030831:5285-5304 Msa1444810:intron 40.0%
AGTATGAGAGGATCATCCTT+TGG - tig0030831:5363-5382 Msa1444810:intergenic 40.0%
AGGATGATCCTCTCATACTA+TGG + tig0030831:5364-5383 Msa1444810:CDS 40.0%
!! TCTGGCCTTTTGCTTGAAAT+TGG + tig0030831:5417-5436 Msa1444810:CDS 40.0%
GTCTACCTAATCTGATCTTG+AGG + tig0030831:6366-6385 Msa1444810:CDS 40.0%
TGTTGCCTCAAGATCAGATT+AGG - tig0030831:6374-6393 Msa1444810:intergenic 40.0%
TGATCTTGAGGCAACATTCA+TGG + tig0030831:6378-6397 Msa1444810:CDS 40.0%
CAACATTCATGGACAAAGGT+GGG + tig0030831:6389-6408 Msa1444810:intron 40.0%
AACATTCATGGACAAAGGTG+GGG + tig0030831:6390-6409 Msa1444810:intron 40.0%
ATAATACTACTCACCTGCCA+AGG - tig0030831:6528-6547 Msa1444810:intergenic 40.0%
TGATTAAACGTAACTCCCTG+TGG - tig0030831:6843-6862 Msa1444810:intergenic 40.0%
AACTAACCCGGTTTCAAGCA+CGG - tig0030831:5202-5221 Msa1444810:intergenic 45.0%
!! CTTGAAACCGGGTTAGTTCA+TGG + tig0030831:5204-5223 Msa1444810:intron 45.0%
GTTGTTAAGGTATGTGGGAG+TGG + tig0030831:5284-5303 Msa1444810:intron 45.0%
GAGGCAACATTCATGGACAA+AGG + tig0030831:6385-6404 Msa1444810:CDS 45.0%
GCAACATTCATGGACAAAGG+TGG + tig0030831:6388-6407 Msa1444810:intron 45.0%
ACATTCATGGACAAAGGTGG+GGG + tig0030831:6391-6410 Msa1444810:intron 45.0%
TAAGTGAAGCCTGTGGAAAC+CGG - tig0030831:6564-6583 Msa1444810:intergenic 45.0%
ACTTATGCCACAGCAGAATC+CGG + tig0030831:6579-6598 Msa1444810:CDS 45.0%
TGAATCGCTTCGTTTAGCAC+CGG - tig0030831:6601-6620 Msa1444810:intergenic 45.0%
AACTAACCCGGTTTCAAGCA+CGG - tig0030831:5202-5221 Msa1444810:intergenic 45.0%
!! CTTGAAACCGGGTTAGTTCA+TGG + tig0030831:5204-5223 Msa1444810:intron 45.0%
GTTGTTAAGGTATGTGGGAG+TGG + tig0030831:5284-5303 Msa1444810:intron 45.0%
GAGGCAACATTCATGGACAA+AGG + tig0030831:6385-6404 Msa1444810:CDS 45.0%
GCAACATTCATGGACAAAGG+TGG + tig0030831:6388-6407 Msa1444810:intron 45.0%
ACATTCATGGACAAAGGTGG+GGG + tig0030831:6391-6410 Msa1444810:intron 45.0%
TAAGTGAAGCCTGTGGAAAC+CGG - tig0030831:6564-6583 Msa1444810:intergenic 45.0%
ACTTATGCCACAGCAGAATC+CGG + tig0030831:6579-6598 Msa1444810:CDS 45.0%
TGAATCGCTTCGTTTAGCAC+CGG - tig0030831:6601-6620 Msa1444810:intergenic 45.0%
!! ATAAAATAAATGTTAATTTA+TGG + tig0030831:5838-5857 Msa1444810:intron 5.0%
!! TAAAATAAATGTTAATTTAT+GGG + tig0030831:5839-5858 Msa1444810:intron 5.0%
!! ATAAAATAAATGTTAATTTA+TGG + tig0030831:5838-5857 Msa1444810:intron 5.0%
!! TAAAATAAATGTTAATTTAT+GGG + tig0030831:5839-5858 Msa1444810:intron 5.0%
CCAGTGAGCCATAGTATGAG+AGG - tig0030831:5375-5394 Msa1444810:intergenic 50.0%
CCTCTCATACTATGGCTCAC+TGG + tig0030831:5372-5391 Msa1444810:CDS 50.0%
CTCATACTATGGCTCACTGG+TGG + tig0030831:5375-5394 Msa1444810:CDS 50.0%
!! GTAGATTTGCCGGTTTCCAC+AGG + tig0030831:6552-6571 Msa1444810:CDS 50.0%
TGTGGCATAAGTGAAGCCTG+TGG - tig0030831:6571-6590 Msa1444810:intergenic 50.0%
! TTTAGCACCGGATTCTGCTG+TGG - tig0030831:6589-6608 Msa1444810:intergenic 50.0%
CCAGTGAGCCATAGTATGAG+AGG - tig0030831:5375-5394 Msa1444810:intergenic 50.0%
CCTCTCATACTATGGCTCAC+TGG + tig0030831:5372-5391 Msa1444810:CDS 50.0%
CTCATACTATGGCTCACTGG+TGG + tig0030831:5375-5394 Msa1444810:CDS 50.0%
!! GTAGATTTGCCGGTTTCCAC+AGG + tig0030831:6552-6571 Msa1444810:CDS 50.0%
TGTGGCATAAGTGAAGCCTG+TGG - tig0030831:6571-6590 Msa1444810:intergenic 50.0%
! TTTAGCACCGGATTCTGCTG+TGG - tig0030831:6589-6608 Msa1444810:intergenic 50.0%
ACCCCTTCCGTGCTTGAAAC+CGG + tig0030831:5192-5211 Msa1444810:CDS 55.0%
ACCCGGTTTCAAGCACGGAA+GGG - tig0030831:5197-5216 Msa1444810:intergenic 55.0%
AACCCGGTTTCAAGCACGGA+AGG - tig0030831:5198-5217 Msa1444810:intergenic 55.0%
CCAGACAAAGCAGAGCAACC+AGG - tig0030831:5402-5421 Msa1444810:intergenic 55.0%
CCTGGTTGCTCTGCTTTGTC+TGG + tig0030831:5399-5418 Msa1444810:CDS 55.0%
ACCCCTTCCGTGCTTGAAAC+CGG + tig0030831:5192-5211 Msa1444810:CDS 55.0%
ACCCGGTTTCAAGCACGGAA+GGG - tig0030831:5197-5216 Msa1444810:intergenic 55.0%
AACCCGGTTTCAAGCACGGA+AGG - tig0030831:5198-5217 Msa1444810:intergenic 55.0%
CCAGACAAAGCAGAGCAACC+AGG - tig0030831:5402-5421 Msa1444810:intergenic 55.0%
CCTGGTTGCTCTGCTTTGTC+TGG + tig0030831:5399-5418 Msa1444810:CDS 55.0%
GGAAGGGGTCCTTGGAATCC+AGG - tig0030831:5181-5200 Msa1444810:intergenic 60.0%
TCAAGCACGGAAGGGGTCCT+TGG - tig0030831:5189-5208 Msa1444810:intergenic 60.0%
CCCGGTTTCAAGCACGGAAG+GGG - tig0030831:5196-5215 Msa1444810:intergenic 60.0%
CCCCTTCCGTGCTTGAAACC+GGG + tig0030831:5193-5212 Msa1444810:CDS 60.0%
! CTATGGCTCACTGGTGGACC+TGG + tig0030831:5381-5400 Msa1444810:CDS 60.0%
GGAAGGGGTCCTTGGAATCC+AGG - tig0030831:5181-5200 Msa1444810:intergenic 60.0%
TCAAGCACGGAAGGGGTCCT+TGG - tig0030831:5189-5208 Msa1444810:intergenic 60.0%
CCCGGTTTCAAGCACGGAAG+GGG - tig0030831:5196-5215 Msa1444810:intergenic 60.0%
CCCCTTCCGTGCTTGAAACC+GGG + tig0030831:5193-5212 Msa1444810:CDS 60.0%
! CTATGGCTCACTGGTGGACC+TGG + tig0030831:5381-5400 Msa1444810:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0030831 gene 4843 6879 4843 ID=Msa1444810;Name=Msa1444810
tig0030831 mRNA 4843 6879 4843 ID=Msa1444810-mRNA-1;Parent=Msa1444810;Name=Msa1444810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=310|1|1|1|1|1|4|205|141
tig0030831 exon 4843 5214 4843 ID=Msa1444810-mRNA-1:exon:14658;Parent=Msa1444810-mRNA-1
tig0030831 exon 5293 5438 5293 ID=Msa1444810-mRNA-1:exon:14659;Parent=Msa1444810-mRNA-1
tig0030831 exon 6330 6406 6330 ID=Msa1444810-mRNA-1:exon:14660;Parent=Msa1444810-mRNA-1
tig0030831 exon 6534 6879 6534 ID=Msa1444810-mRNA-1:exon:14661;Parent=Msa1444810-mRNA-1
tig0030831 five_prime_UTR 4843 5152 4843 ID=Msa1444810-mRNA-1:five_prime_utr;Parent=Msa1444810-mRNA-1
tig0030831 CDS 5153 5214 5153 ID=Msa1444810-mRNA-1:cds;Parent=Msa1444810-mRNA-1
tig0030831 CDS 5293 5438 5293 ID=Msa1444810-mRNA-1:cds;Parent=Msa1444810-mRNA-1
tig0030831 CDS 6330 6406 6330 ID=Msa1444810-mRNA-1:cds;Parent=Msa1444810-mRNA-1
tig0030831 CDS 6534 6674 6534 ID=Msa1444810-mRNA-1:cds;Parent=Msa1444810-mRNA-1
tig0030831 three_prime_UTR 6675 6879 6675 ID=Msa1444810-mRNA-1:three_prime_utr;Parent=Msa1444810-mRNA-1
Gene Sequence

>Msa1444810

ATGTGGCTCTATAGTGAAGTTTCTTCCTGGATTCCAAGGACCCCTTCCGTGCTTGAAACCGGGTATGTGGGAGTGGGTGAGAAAGAAGATGTGCAAGTGTTCTACTATTTCATTGAATCAGAGAAGAATCCAAAGGATGATCCTCTCATACTATGGCTCACTGGTGGACCTGGTTGCTCTGCTTTGTCTGGCCTTTTGCTTGAAATTGGTCCACTTGAGTTAAAAAAGGAGGAATACAATGGGAGTCTACCTAATCTGATCTTGAGGCAACATTCATGGACAAAGGTGAGTAGTATTATATTTGTAGATTTGCCGGTTTCCACAGGCTTCACTTATGCCACAGCAGAATCCGGTGCTAAACGAAGCGATTCAATACTAGTTCACCAAGTTCATCAATTTCTCAGGAAGGTATACATTTCACAATAA
Protein sequence

>Msa1444810

MWLYSEVSSWIPRTPSVLETGYVGVGEKEDVQVFYYFIESEKNPKDDPLILWLTGGPGCSALSGLLLEIGPLELKKEEYNGSLPNLILRQHSWTKVSSIIFVDLPVSTGFTYATAESGAKRSDSILVHQVHQFLRKVYISQ*