Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444820 | sp|O81009|SCP12_ARATH | 51.504 | 266 | 104 | 5 | 1 | 242 | 171 | 435 | 6.47e-79 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444820 | G7ILY3 | 77.241 | 290 | 18 | 3 | 1 | 242 | 180 | 469 | 5.04e-155 | 448 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1379080 | Msa1444820 | 0.849630 | 2.859371e-60 | -8.615850e-47 |
| Msa1379100 | Msa1444820 | 0.813287 | 2.763083e-51 | -8.615850e-47 |
| Msa1444810 | Msa1444820 | 0.824303 | 8.681528e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444820 | MtrunA17_Chr2g0285371 | 77.241 | 290 | 18 | 3 | 1 | 242 | 180 | 469 | 9.71e-159 | 448 |
| Msa1444820 | MtrunA17_Chr2g0285351 | 71.724 | 290 | 34 | 3 | 1 | 242 | 180 | 469 | 4.74e-147 | 419 |
| Msa1444820 | MtrunA17_Chr2g0285381 | 60.345 | 290 | 60 | 6 | 1 | 242 | 183 | 465 | 4.14e-112 | 330 |
| Msa1444820 | MtrunA17_Chr3g0133011 | 54.949 | 293 | 81 | 5 | 1 | 242 | 204 | 496 | 9.72e-105 | 311 |
| Msa1444820 | MtrunA17_Chr4g0009661 | 53.147 | 286 | 89 | 3 | 1 | 242 | 186 | 470 | 8.67e-97 | 290 |
| Msa1444820 | MtrunA17_Chr4g0009701 | 52.941 | 289 | 85 | 4 | 1 | 242 | 186 | 470 | 3.02e-96 | 289 |
| Msa1444820 | MtrunA17_Chr4g0009651 | 53.846 | 286 | 87 | 4 | 1 | 242 | 186 | 470 | 1.07e-95 | 288 |
| Msa1444820 | MtrunA17_Chr4g0009641 | 51.399 | 286 | 94 | 3 | 1 | 242 | 162 | 446 | 4.59e-95 | 285 |
| Msa1444820 | MtrunA17_Chr4g0009681 | 52.098 | 286 | 92 | 3 | 1 | 242 | 183 | 467 | 3.50e-92 | 279 |
| Msa1444820 | MtrunA17_Chr4g0009711 | 51.399 | 286 | 94 | 3 | 1 | 242 | 186 | 470 | 8.69e-90 | 273 |
| Msa1444820 | MtrunA17_Chr4g0009671 | 48.951 | 286 | 101 | 3 | 1 | 242 | 151 | 435 | 1.25e-84 | 258 |
| Msa1444820 | MtrunA17_Chr4g0009721 | 47.431 | 253 | 88 | 3 | 34 | 242 | 168 | 419 | 1.37e-71 | 224 |
| Msa1444820 | MtrunA17_Chr8g0338461 | 32.381 | 315 | 136 | 6 | 1 | 238 | 177 | 491 | 3.19e-53 | 179 |
| Msa1444820 | MtrunA17_Chr7g0234051 | 33.754 | 317 | 130 | 8 | 1 | 238 | 176 | 491 | 1.28e-52 | 177 |
| Msa1444820 | MtrunA17_Chr7g0249431 | 32.143 | 336 | 121 | 7 | 1 | 242 | 176 | 498 | 2.20e-51 | 174 |
| Msa1444820 | MtrunA17_Chr3g0093971 | 32.082 | 293 | 130 | 6 | 1 | 238 | 172 | 450 | 6.98e-41 | 145 |
| Msa1444820 | MtrunA17_Chr7g0234041 | 31.095 | 283 | 118 | 6 | 1 | 206 | 167 | 449 | 3.23e-36 | 133 |
| Msa1444820 | MtrunA17_Chr2g0285401 | 80.645 | 62 | 12 | 0 | 145 | 206 | 29 | 90 | 3.97e-31 | 110 |
| Msa1444820 | MtrunA17_Chr2g0279381 | 32.663 | 199 | 89 | 4 | 47 | 200 | 13 | 211 | 5.60e-27 | 103 |
| Msa1444820 | MtrunA17_Chr2g0318911 | 27.719 | 285 | 156 | 8 | 1 | 242 | 185 | 462 | 1.56e-23 | 98.2 |
| Msa1444820 | MtrunA17_Chr2g0309521 | 25.448 | 279 | 170 | 7 | 1 | 242 | 184 | 461 | 1.77e-21 | 92.4 |
| Msa1444820 | MtrunA17_Chr2g0309511 | 25.263 | 285 | 163 | 7 | 1 | 242 | 184 | 461 | 2.54e-21 | 92.0 |
| Msa1444820 | MtrunA17_Chr1g0199971 | 27.500 | 280 | 163 | 9 | 1 | 242 | 178 | 455 | 2.65e-20 | 89.0 |
| Msa1444820 | MtrunA17_Chr2g0309541 | 25.965 | 285 | 161 | 8 | 1 | 242 | 185 | 462 | 2.68e-20 | 89.0 |
| Msa1444820 | MtrunA17_Chr1g0199991 | 27.660 | 282 | 160 | 11 | 1 | 242 | 178 | 455 | 4.12e-20 | 88.6 |
| Msa1444820 | MtrunA17_Chr4g0038311 | 26.923 | 286 | 164 | 9 | 1 | 242 | 178 | 462 | 5.34e-20 | 88.2 |
| Msa1444820 | MtrunA17_Chr3g0126051 | 25.589 | 297 | 156 | 11 | 1 | 242 | 176 | 462 | 6.69e-19 | 85.1 |
| Msa1444820 | MtrunA17_Chr7g0219051 | 27.336 | 289 | 160 | 10 | 1 | 242 | 178 | 463 | 7.06e-19 | 85.1 |
| Msa1444820 | MtrunA17_Chr3g0094811 | 25.170 | 294 | 157 | 10 | 1 | 242 | 171 | 453 | 4.12e-18 | 82.8 |
| Msa1444820 | MtrunA17_Chr8g0385871 | 26.280 | 293 | 160 | 11 | 1 | 242 | 174 | 461 | 4.45e-18 | 82.8 |
| Msa1444820 | MtrunA17_Chr3g0126031 | 26.190 | 294 | 157 | 10 | 1 | 242 | 170 | 455 | 4.54e-18 | 82.8 |
| Msa1444820 | MtrunA17_Chr3g0090331 | 25.180 | 278 | 167 | 8 | 1 | 242 | 217 | 489 | 6.39e-18 | 82.4 |
| Msa1444820 | MtrunA17_Chr4g0020241 | 25.952 | 289 | 149 | 10 | 1 | 242 | 216 | 486 | 8.06e-18 | 82.0 |
| Msa1444820 | MtrunA17_Chr1g0204191 | 39.394 | 99 | 56 | 1 | 148 | 242 | 391 | 489 | 9.18e-18 | 82.0 |
| Msa1444820 | MtrunA17_Chr3g0131731 | 26.014 | 296 | 157 | 11 | 1 | 242 | 173 | 460 | 2.70e-17 | 80.5 |
| Msa1444820 | MtrunA17_Chr2g0281641 | 26.490 | 302 | 149 | 11 | 1 | 242 | 98 | 386 | 1.73e-16 | 77.8 |
| Msa1444820 | MtrunA17_Chr6g0457241 | 48.214 | 56 | 29 | 0 | 167 | 222 | 1 | 56 | 3.96e-16 | 70.5 |
| Msa1444820 | MtrunA17_Chr2g0304931 | 27.018 | 285 | 159 | 9 | 1 | 241 | 181 | 460 | 4.03e-16 | 77.0 |
| Msa1444820 | MtrunA17_Chr1g0165821 | 29.496 | 139 | 78 | 3 | 124 | 242 | 39 | 177 | 8.67e-16 | 72.8 |
| Msa1444820 | MtrunA17_Chr3g0118841 | 25.725 | 276 | 153 | 8 | 1 | 237 | 222 | 484 | 9.64e-16 | 75.9 |
| Msa1444820 | MtrunA17_Chr5g0431301 | 23.729 | 295 | 167 | 9 | 1 | 242 | 171 | 460 | 2.10e-15 | 75.1 |
| Msa1444820 | MtrunA17_Chr4g0047861 | 24.739 | 287 | 161 | 9 | 1 | 237 | 198 | 479 | 2.81e-15 | 74.7 |
| Msa1444820 | MtrunA17_Chr3g0118851 | 25.180 | 278 | 153 | 9 | 1 | 237 | 221 | 484 | 3.69e-15 | 74.3 |
| Msa1444820 | MtrunA17_Chr7g0221551 | 25.606 | 289 | 165 | 10 | 1 | 242 | 171 | 456 | 4.89e-15 | 73.9 |
| Msa1444820 | MtrunA17_Chr4g0068841 | 23.232 | 297 | 171 | 10 | 1 | 242 | 182 | 476 | 1.13e-14 | 72.8 |
| Msa1444820 | MtrunA17_Chr2g0281621 | 25.965 | 285 | 160 | 12 | 1 | 237 | 178 | 459 | 2.08e-14 | 72.0 |
| Msa1444820 | MtrunA17_Chr1g0153881 | 28.464 | 267 | 153 | 10 | 1 | 237 | 233 | 491 | 4.50e-13 | 68.2 |
| Msa1444820 | MtrunA17_Chr1g0153921 | 33.333 | 126 | 71 | 3 | 124 | 237 | 86 | 210 | 2.15e-12 | 64.3 |
| Msa1444820 | MtrunA17_Chr5g0447441 | 23.985 | 271 | 174 | 9 | 1 | 242 | 170 | 437 | 7.95e-12 | 64.3 |
| Msa1444820 | MtrunA17_Chr3g0118831 | 23.828 | 256 | 153 | 7 | 1 | 237 | 221 | 453 | 3.82e-11 | 62.4 |
| Msa1444820 | MtrunA17_Chr3g0118881 | 23.944 | 284 | 157 | 9 | 1 | 237 | 221 | 492 | 4.44e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444820 | AT2G22920.2 | 51.504 | 266 | 104 | 5 | 1 | 242 | 171 | 435 | 6.58e-80 | 246 |
| Msa1444820 | AT2G22990.6 | 51.301 | 269 | 101 | 7 | 1 | 242 | 54 | 319 | 8.13e-80 | 243 |
| Msa1444820 | AT2G22990.1 | 51.301 | 269 | 101 | 7 | 1 | 242 | 168 | 433 | 2.32e-78 | 243 |
| Msa1444820 | AT2G22990.2 | 50.558 | 269 | 103 | 7 | 1 | 242 | 54 | 319 | 3.46e-78 | 238 |
| Msa1444820 | AT2G22970.1 | 49.621 | 264 | 110 | 4 | 1 | 242 | 171 | 433 | 4.39e-78 | 242 |
| Msa1444820 | AT5G09640.1 | 47.138 | 297 | 98 | 8 | 1 | 242 | 173 | 465 | 9.03e-78 | 242 |
| Msa1444820 | AT2G22920.3 | 51.373 | 255 | 99 | 5 | 12 | 242 | 3 | 256 | 2.99e-77 | 234 |
| Msa1444820 | AT1G73290.1 | 50.000 | 262 | 110 | 4 | 1 | 242 | 178 | 438 | 7.30e-77 | 239 |
| Msa1444820 | AT2G22990.5 | 50.558 | 269 | 103 | 7 | 1 | 242 | 159 | 424 | 8.04e-77 | 238 |
| Msa1444820 | AT3G10450.2 | 48.106 | 264 | 114 | 5 | 1 | 242 | 132 | 394 | 1.53e-76 | 237 |
| Msa1444820 | AT3G10450.1 | 48.106 | 264 | 114 | 5 | 1 | 242 | 175 | 437 | 4.79e-76 | 237 |
| Msa1444820 | AT2G22980.1 | 49.057 | 265 | 106 | 5 | 1 | 242 | 172 | 430 | 3.34e-74 | 232 |
| Msa1444820 | AT5G36180.5 | 49.815 | 271 | 99 | 7 | 1 | 242 | 77 | 339 | 1.44e-73 | 227 |
| Msa1444820 | AT5G36180.3 | 49.815 | 271 | 99 | 7 | 1 | 242 | 77 | 339 | 1.44e-73 | 227 |
| Msa1444820 | AT2G23010.1 | 49.814 | 269 | 107 | 6 | 1 | 242 | 170 | 437 | 1.45e-73 | 230 |
| Msa1444820 | AT1G73310.1 | 48.864 | 264 | 112 | 4 | 1 | 242 | 179 | 441 | 2.06e-73 | 230 |
| Msa1444820 | AT1G73270.2 | 49.242 | 264 | 111 | 5 | 1 | 242 | 179 | 441 | 2.42e-73 | 230 |
| Msa1444820 | AT1G73270.1 | 49.242 | 264 | 111 | 5 | 1 | 242 | 179 | 441 | 2.63e-73 | 230 |
| Msa1444820 | AT1G73280.3 | 46.970 | 264 | 117 | 4 | 1 | 242 | 52 | 314 | 9.71e-73 | 224 |
| Msa1444820 | AT1G73300.1 | 49.446 | 271 | 100 | 7 | 1 | 242 | 179 | 441 | 1.42e-72 | 228 |
| Msa1444820 | AT1G73300.2 | 49.446 | 271 | 100 | 7 | 1 | 242 | 179 | 441 | 1.42e-72 | 228 |
| Msa1444820 | AT1G73280.4 | 46.970 | 264 | 117 | 4 | 1 | 242 | 77 | 339 | 1.76e-72 | 224 |
| Msa1444820 | AT1G33540.2 | 44.674 | 291 | 111 | 6 | 1 | 242 | 132 | 421 | 2.07e-72 | 227 |
| Msa1444820 | AT5G36180.1 | 49.815 | 271 | 99 | 7 | 1 | 242 | 179 | 441 | 2.45e-72 | 227 |
| Msa1444820 | AT2G23000.1 | 46.528 | 288 | 88 | 6 | 1 | 242 | 170 | 437 | 2.54e-72 | 227 |
| Msa1444820 | AT2G23000.2 | 46.528 | 288 | 88 | 6 | 1 | 242 | 170 | 437 | 2.54e-72 | 227 |
| Msa1444820 | AT1G33540.1 | 44.674 | 291 | 111 | 6 | 1 | 242 | 175 | 464 | 4.75e-72 | 227 |
| Msa1444820 | AT2G23010.2 | 49.071 | 269 | 109 | 6 | 1 | 242 | 170 | 437 | 6.85e-72 | 226 |
| Msa1444820 | AT1G73280.1 | 48.148 | 270 | 105 | 9 | 1 | 242 | 179 | 441 | 2.18e-71 | 225 |
| Msa1444820 | AT3G12203.2 | 44.444 | 288 | 88 | 5 | 1 | 242 | 118 | 379 | 1.99e-70 | 221 |
| Msa1444820 | AT3G12203.3 | 44.444 | 288 | 88 | 5 | 1 | 242 | 155 | 416 | 4.67e-70 | 221 |
| Msa1444820 | AT3G12203.1 | 44.444 | 288 | 88 | 5 | 1 | 242 | 176 | 437 | 8.58e-70 | 221 |
| Msa1444820 | AT2G22970.3 | 48.750 | 240 | 101 | 3 | 1 | 218 | 171 | 410 | 5.61e-68 | 216 |
| Msa1444820 | AT2G22970.4 | 48.739 | 238 | 100 | 3 | 1 | 216 | 171 | 408 | 9.65e-68 | 214 |
| Msa1444820 | AT3G12240.1 | 45.455 | 264 | 121 | 5 | 1 | 242 | 174 | 436 | 3.56e-66 | 211 |
| Msa1444820 | AT3G12230.1 | 46.591 | 264 | 118 | 5 | 1 | 242 | 173 | 435 | 2.32e-65 | 209 |
| Msa1444820 | AT2G22990.3 | 47.490 | 259 | 104 | 7 | 1 | 229 | 168 | 424 | 8.57e-65 | 208 |
| Msa1444820 | AT2G22990.4 | 48.971 | 243 | 95 | 6 | 1 | 216 | 168 | 408 | 1.27e-64 | 207 |
| Msa1444820 | AT2G22980.5 | 47.280 | 239 | 98 | 4 | 1 | 216 | 55 | 288 | 8.04e-64 | 201 |
| Msa1444820 | AT5G36180.2 | 48.780 | 246 | 90 | 6 | 1 | 217 | 77 | 315 | 2.05e-63 | 201 |
| Msa1444820 | AT3G10450.3 | 46.218 | 238 | 106 | 4 | 1 | 216 | 132 | 369 | 2.41e-63 | 202 |
| Msa1444820 | AT3G10450.4 | 46.218 | 238 | 106 | 4 | 1 | 216 | 175 | 412 | 7.01e-63 | 202 |
| Msa1444820 | AT2G22980.4 | 45.669 | 254 | 108 | 5 | 1 | 229 | 172 | 420 | 1.81e-62 | 201 |
| Msa1444820 | AT2G22980.2 | 47.280 | 239 | 98 | 4 | 1 | 216 | 172 | 405 | 2.22e-62 | 201 |
| Msa1444820 | AT3G12220.2 | 47.232 | 271 | 106 | 8 | 1 | 242 | 143 | 405 | 1.26e-60 | 196 |
| Msa1444820 | AT3G12220.1 | 47.232 | 271 | 106 | 8 | 1 | 242 | 173 | 435 | 5.12e-60 | 195 |
| Msa1444820 | AT2G22920.1 | 47.556 | 225 | 94 | 4 | 1 | 201 | 171 | 395 | 6.32e-58 | 189 |
| Msa1444820 | AT1G73310.3 | 45.815 | 227 | 101 | 3 | 1 | 205 | 77 | 303 | 1.15e-56 | 184 |
| Msa1444820 | AT1G73290.3 | 47.511 | 221 | 96 | 3 | 1 | 201 | 178 | 398 | 2.44e-56 | 185 |
| Msa1444820 | AT1G73310.2 | 45.815 | 227 | 101 | 3 | 1 | 205 | 179 | 405 | 1.96e-55 | 183 |
| Msa1444820 | AT4G12910.1 | 34.395 | 314 | 127 | 7 | 1 | 237 | 181 | 492 | 2.08e-55 | 185 |
| Msa1444820 | AT3G12220.3 | 43.629 | 259 | 81 | 4 | 1 | 242 | 173 | 383 | 6.84e-55 | 181 |
| Msa1444820 | AT5G36180.4 | 45.238 | 252 | 100 | 7 | 1 | 221 | 77 | 321 | 5.87e-53 | 174 |
| Msa1444820 | AT2G22960.1 | 58.824 | 136 | 39 | 2 | 123 | 242 | 50 | 184 | 7.31e-48 | 156 |
| Msa1444820 | AT4G12910.2 | 31.769 | 277 | 110 | 7 | 1 | 200 | 181 | 455 | 1.07e-36 | 134 |
| Msa1444820 | AT3G25420.1 | 38.971 | 136 | 66 | 1 | 124 | 242 | 359 | 494 | 2.43e-34 | 129 |
| Msa1444820 | AT3G25420.1 | 50.000 | 70 | 34 | 1 | 1 | 69 | 174 | 243 | 7.97e-16 | 76.6 |
| Msa1444820 | AT2G22920.4 | 44.444 | 144 | 74 | 3 | 1 | 138 | 171 | 314 | 1.42e-29 | 113 |
| Msa1444820 | AT2G22970.2 | 42.657 | 143 | 77 | 2 | 1 | 138 | 171 | 313 | 3.97e-29 | 112 |
| Msa1444820 | AT3G52000.1 | 28.716 | 296 | 135 | 10 | 1 | 242 | 205 | 478 | 1.53e-27 | 110 |
| Msa1444820 | AT2G22980.3 | 39.130 | 184 | 84 | 4 | 1 | 161 | 174 | 352 | 5.05e-27 | 107 |
| Msa1444820 | AT1G73280.2 | 40.212 | 189 | 79 | 8 | 1 | 161 | 179 | 361 | 1.57e-26 | 105 |
| Msa1444820 | AT2G05850.1 | 28.283 | 297 | 135 | 12 | 1 | 242 | 210 | 483 | 4.74e-25 | 103 |
| Msa1444820 | AT3G52010.1 | 27.526 | 287 | 150 | 7 | 1 | 242 | 210 | 483 | 5.78e-24 | 100 |
| Msa1444820 | AT4G30610.1 | 28.333 | 300 | 143 | 11 | 1 | 242 | 176 | 461 | 1.64e-23 | 98.6 |
| Msa1444820 | AT1G73290.2 | 55.556 | 81 | 35 | 1 | 1 | 80 | 178 | 258 | 1.83e-21 | 91.3 |
| Msa1444820 | AT4G30810.1 | 24.483 | 290 | 162 | 7 | 1 | 242 | 181 | 461 | 4.07e-21 | 92.0 |
| Msa1444820 | AT5G08260.1 | 25.850 | 294 | 165 | 7 | 1 | 242 | 183 | 475 | 2.95e-20 | 89.4 |
| Msa1444820 | AT4G15100.1 | 26.280 | 293 | 156 | 8 | 1 | 237 | 187 | 475 | 7.99e-20 | 88.2 |
| Msa1444820 | AT3G17180.1 | 25.914 | 301 | 155 | 11 | 1 | 242 | 183 | 474 | 9.79e-20 | 87.8 |
| Msa1444820 | AT3G07990.1 | 26.071 | 280 | 167 | 9 | 1 | 242 | 179 | 456 | 1.13e-19 | 87.8 |
| Msa1444820 | AT2G35770.1 | 28.159 | 277 | 164 | 10 | 1 | 242 | 181 | 457 | 7.04e-19 | 85.5 |
| Msa1444820 | AT5G23210.5 | 26.910 | 301 | 160 | 10 | 1 | 242 | 100 | 399 | 9.35e-19 | 84.7 |
| Msa1444820 | AT5G23210.2 | 26.910 | 301 | 160 | 10 | 1 | 242 | 99 | 398 | 9.95e-19 | 84.7 |
| Msa1444820 | AT3G52020.1 | 26.056 | 284 | 161 | 10 | 1 | 242 | 221 | 497 | 1.11e-18 | 85.1 |
| Msa1444820 | AT1G61130.1 | 27.273 | 286 | 156 | 9 | 1 | 238 | 174 | 455 | 1.20e-18 | 84.7 |
| Msa1444820 | AT5G23210.1 | 26.910 | 301 | 160 | 10 | 1 | 242 | 195 | 494 | 1.45e-18 | 84.7 |
| Msa1444820 | AT3G02110.1 | 25.497 | 302 | 154 | 11 | 1 | 242 | 180 | 470 | 5.08e-18 | 82.8 |
| Msa1444820 | AT2G24010.1 | 23.875 | 289 | 162 | 8 | 1 | 242 | 173 | 450 | 1.21e-17 | 81.6 |
| Msa1444820 | AT2G24010.2 | 23.875 | 289 | 162 | 8 | 1 | 242 | 188 | 465 | 1.30e-17 | 81.6 |
| Msa1444820 | AT2G35780.1 | 25.532 | 282 | 164 | 9 | 1 | 242 | 175 | 450 | 1.48e-17 | 81.6 |
| Msa1444820 | AT3G63470.1 | 25.180 | 278 | 167 | 10 | 1 | 242 | 224 | 496 | 1.67e-17 | 81.6 |
| Msa1444820 | AT2G24000.1 | 24.150 | 294 | 164 | 8 | 1 | 242 | 174 | 460 | 7.41e-17 | 79.7 |
| Msa1444820 | AT1G11080.2 | 27.181 | 298 | 151 | 11 | 1 | 238 | 193 | 484 | 9.92e-16 | 76.3 |
| Msa1444820 | AT1G11080.1 | 27.181 | 298 | 151 | 11 | 1 | 238 | 193 | 484 | 1.23e-15 | 76.3 |
| Msa1444820 | AT5G22980.1 | 24.364 | 275 | 170 | 8 | 1 | 240 | 223 | 494 | 6.39e-15 | 73.9 |
| Msa1444820 | AT2G12480.4 | 25.279 | 269 | 165 | 10 | 1 | 242 | 173 | 432 | 8.31e-15 | 73.6 |
| Msa1444820 | AT2G12480.3 | 24.746 | 295 | 158 | 10 | 1 | 242 | 173 | 456 | 1.86e-14 | 72.4 |
| Msa1444820 | AT5G42240.1 | 24.068 | 295 | 166 | 10 | 1 | 242 | 174 | 463 | 2.73e-14 | 72.0 |
| Msa1444820 | AT1G43780.1 | 23.469 | 294 | 170 | 8 | 1 | 242 | 179 | 469 | 3.75e-14 | 71.6 |
| Msa1444820 | AT2G33530.1 | 23.711 | 291 | 170 | 9 | 1 | 242 | 174 | 461 | 1.10e-13 | 70.5 |
| Msa1444820 | AT2G24000.2 | 23.345 | 287 | 161 | 8 | 8 | 242 | 118 | 397 | 1.34e-13 | 69.7 |
| Msa1444820 | AT2G12480.1 | 25.092 | 271 | 161 | 12 | 1 | 242 | 173 | 430 | 4.36e-13 | 68.6 |
| Msa1444820 | AT2G24010.3 | 21.975 | 314 | 162 | 9 | 1 | 242 | 159 | 461 | 7.14e-13 | 67.8 |
| Msa1444820 | AT1G28110.1 | 24.746 | 295 | 160 | 11 | 1 | 242 | 172 | 457 | 1.80e-12 | 66.6 |
| Msa1444820 | AT1G28110.2 | 24.746 | 295 | 160 | 11 | 1 | 242 | 172 | 457 | 1.80e-12 | 66.6 |
| Msa1444820 | AT5G42230.1 | 22.109 | 294 | 173 | 8 | 1 | 242 | 170 | 459 | 2.40e-11 | 63.5 |
| Msa1444820 | AT5G42230.2 | 22.109 | 294 | 173 | 8 | 1 | 242 | 170 | 459 | 2.40e-11 | 63.5 |
Find 47 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTGCAGGAAATGAAAA+AGG | 0.253261 | tig0030831:+41463 | Msa1444820:intron |
| CAATAACCCATGAGGAAATA+TGG | 0.267050 | tig0030831:-42965 | Msa1444820:intergenic |
| CATATTTCCTCATGGGTTAT+TGG | 0.274804 | tig0030831:+42966 | Msa1444820:CDS |
| ATATTTCCTCATGGGTTATT+GGG | 0.296825 | tig0030831:+42967 | Msa1444820:CDS |
| ACAAGATAATCATAGCTGTT+AGG | 0.311397 | tig0030831:-43284 | Msa1444820:intergenic |
| GAGATTTGTGTTGAGGAAAT+TGG | 0.349292 | tig0030831:-42808 | Msa1444820:intergenic |
| GCATTCGTTCACTAATTTAC+AGG | 0.355008 | tig0030831:+43324 | Msa1444820:CDS |
| TTTCTTCAGGGATACTTGTT+GGG | 0.364854 | tig0030831:+41739 | Msa1444820:intron |
| TTTGCGAACATTATCATCAT+TGG | 0.369155 | tig0030831:-42990 | Msa1444820:intergenic |
| ATTGCTGGTGACTCATACTC+TGG | 0.380453 | tig0030831:+41318 | Msa1444820:CDS |
| TCTTGAACAATGACAGGAAC+AGG | 0.395346 | tig0030831:-41345 | Msa1444820:intergenic |
| CTTTCTTCAGGGATACTTGT+TGG | 0.403695 | tig0030831:+41738 | Msa1444820:intron |
| CATACTGATGACCAAGTTGC+AGG | 0.411083 | tig0030831:+43531 | Msa1444820:CDS |
| CAAGATAATCATAGCTGTTA+GGG | 0.423601 | tig0030831:-43283 | Msa1444820:intergenic |
| ACTACTCCATCATTGATGAT+TGG | 0.428283 | tig0030831:+43499 | Msa1444820:CDS |
| CTTGTAAATCTCAGTAGAAA+AGG | 0.436944 | tig0030831:+43302 | Msa1444820:CDS |
| AGTCCCATTCCATGAGCAAA+AGG | 0.456013 | tig0030831:-41802 | Msa1444820:intergenic |
| AGTAGCAAATGTCATCTGAT+TGG | 0.462771 | tig0030831:-43684 | Msa1444820:intergenic |
| AACATGTCAAAACATTCTTT+AGG | 0.471328 | tig0030831:-44602 | Msa1444820:intergenic |
| GCAATTTCTTGAACAATGAC+AGG | 0.477759 | tig0030831:-41351 | Msa1444820:intergenic |
| CATTCTTTAGGCCGGTACTC+TGG | 0.485777 | tig0030831:-44590 | Msa1444820:intergenic |
| TTTCAAGCCACTCGCAACTC+GGG | 0.497080 | tig0030831:-42749 | Msa1444820:intergenic |
| CCTGGAGATTTATCCATGGT+TGG | 0.509586 | tig0030831:-41489 | Msa1444820:intergenic |
| CTGTCTCCAATCATCAATGA+TGG | 0.516066 | tig0030831:-43505 | Msa1444820:intergenic |
| GACACACAGCTCCAGAGTAC+CGG | 0.518961 | tig0030831:+44579 | Msa1444820:CDS |
| AGTTATCCATATTTCCTCAT+GGG | 0.521327 | tig0030831:+42959 | Msa1444820:CDS |
| GAGTTATCCATATTTCCTCA+TGG | 0.523834 | tig0030831:+42958 | Msa1444820:intron |
| TTCTTCAGGGATACTTGTTG+GGG | 0.528905 | tig0030831:+41740 | Msa1444820:intron |
| CCAACCATGGATAAATCTCC+AGG | 0.530034 | tig0030831:+41489 | Msa1444820:CDS |
| ATTACTCGACAGCTTAAAAG+TGG | 0.540742 | tig0030831:-42837 | Msa1444820:intergenic |
| TGTCAAAACATTCTTTAGGC+CGG | 0.556404 | tig0030831:-44598 | Msa1444820:intergenic |
| GCAATTTGAGATTTGTGTTG+AGG | 0.557107 | tig0030831:-42815 | Msa1444820:intergenic |
| GTCCCATTCCATGAGCAAAA+GGG | 0.589244 | tig0030831:-41801 | Msa1444820:intergenic |
| GAATGCTGCAACAACCAGAA+AGG | 0.589442 | tig0030831:+41762 | Msa1444820:CDS |
| AATTACGTCGTATAGTTCAT+CGG | 0.595080 | tig0030831:-41830 | Msa1444820:intergenic |
| TTGACCTGGAGATTTATCCA+TGG | 0.606484 | tig0030831:-41493 | Msa1444820:intergenic |
| TTTGTGTTGAGGAAATTGGT+GGG | 0.606981 | tig0030831:-42804 | Msa1444820:intergenic |
| GATGACATTTGCTACTGTGA+AGG | 0.621718 | tig0030831:+43691 | Msa1444820:CDS |
| ATTTGTGTTGAGGAAATTGG+TGG | 0.623341 | tig0030831:-42805 | Msa1444820:intergenic |
| TGCTGCAACAACCAGAAAGG+AGG | 0.624085 | tig0030831:+41765 | Msa1444820:CDS |
| CAAAGCGCTACATATTCAGA+AGG | 0.633829 | tig0030831:+43009 | Msa1444820:CDS |
| ATACTGATGACCAAGTTGCA+GGG | 0.640657 | tig0030831:+43532 | Msa1444820:CDS |
| AGTGGCTTGAAAATTCTCCA+AGG | 0.665223 | tig0030831:+42760 | Msa1444820:CDS |
| TCATTGATGATTGGAGACAG+TGG | 0.681290 | tig0030831:+43508 | Msa1444820:CDS |
| TGTGCAAGTGTAGATACACA+AGG | 0.694165 | tig0030831:+43654 | Msa1444820:intron |
| ATTGTTCAAGAAATTGCACA+AGG | 0.702131 | tig0030831:+41357 | Msa1444820:CDS |
| CATTGGCCCAATAACCCATG+AGG | 0.706316 | tig0030831:-42973 | Msa1444810:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | tig0030831:44139-44158 | Msa1444820:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | tig0030831:44138-44157 | Msa1444820:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | tig0030831:44139-44158 | Msa1444820:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | tig0030831:44138-44157 | Msa1444820:intron | 0.0% |
| !! | TTAAAAGTCAAAAAAAAATT+CGG | + | tig0030831:42322-42341 | Msa1444820:intron | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | + | tig0030831:42359-42378 | Msa1444820:intron | 10.0% |
| !! | AAAAAATCGTAAAAAAAATT+CGG | + | tig0030831:42383-42402 | Msa1444820:intron | 10.0% |
| !!! | TATTAATAAGAGTTTATTTT+TGG | - | tig0030831:44121-44140 | Msa1444820:intergenic | 10.0% |
| !! | TATATATATATATATGTATG+GGG | + | tig0030831:44157-44176 | Msa1444820:intron | 10.0% |
| !!! | TTATTAATTGATCAAATTTT+CGG | + | tig0030831:44260-44279 | Msa1444820:intron | 10.0% |
| !!! | TATATATAAGAGTTTATTTT+TGG | - | tig0030831:44376-44395 | Msa1444820:intergenic | 10.0% |
| !!! | TATTAATAAGAGTTTATTTT+TGG | - | tig0030831:44121-44140 | Msa1444820:intergenic | 10.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | + | tig0030831:42360-42379 | Msa1444820:intron | 15.0% |
| !! | AAAAATCGTAAAAAAAATTC+GGG | + | tig0030831:42384-42403 | Msa1444820:intron | 15.0% |
| !!! | AAAACTGAATTTTTTTTTGA+AGG | + | tig0030831:42409-42428 | Msa1444820:intron | 15.0% |
| !! | TGAAATTTGACAAAAATAAA+AGG | - | tig0030831:42641-42660 | Msa1444820:intergenic | 15.0% |
| !!! | ATTTTCCATAAGAAAAATAT+AGG | - | tig0030831:43397-43416 | Msa1444820:intergenic | 15.0% |
| !! | TTTGATATTTATAATAACAG+CGG | + | tig0030831:43420-43439 | Msa1444820:intron | 15.0% |
| !! | GTTATTAAATATAACCATTA+TGG | + | tig0030831:43590-43609 | Msa1444820:intron | 15.0% |
| !!! | TTATGATTATGAATTTGTTT+AGG | - | tig0030831:43948-43967 | Msa1444820:intergenic | 15.0% |
| !!! | TATTAATTGATCAAATTTTC+GGG | + | tig0030831:44261-44280 | Msa1444820:intron | 15.0% |
| !! | AAAACAAAAAAAAATAAGCC+AGG | + | tig0030831:42437-42456 | Msa1444820:intron | 20.0% |
| !! | AAACAAAAAAAAATAAGCCA+GGG | + | tig0030831:42438-42457 | Msa1444820:intron | 20.0% |
| !!! | ACTTTTTTAATGGAAAATAG+AGG | - | tig0030831:43126-43145 | Msa1444820:intergenic | 20.0% |
| !!! | AATGTGAAGAACTTTTTTAA+TGG | - | tig0030831:43136-43155 | Msa1444820:intergenic | 20.0% |
| !! | TTTCTTATGAGGTATATTAA+AGG | - | tig0030831:43258-43277 | Msa1444820:intergenic | 20.0% |
| !! | AAACAAATGTTAATTCAACT+TGG | - | tig0030831:43628-43647 | Msa1444820:intergenic | 20.0% |
| !!! | CATTCATATTATCTTGTTTA+AGG | - | tig0030831:43719-43738 | Msa1444820:intergenic | 20.0% |
| !! | CTTAAACAAGATAATATGAA+TGG | + | tig0030831:43717-43736 | Msa1444820:intron | 20.0% |
| !!! | GTGCTTATTGTTAATTTTTA+AGG | - | tig0030831:43765-43784 | Msa1444820:intergenic | 20.0% |
| !! | CATAATCATAATCATGTATT+CGG | + | tig0030831:43957-43976 | Msa1444820:intron | 20.0% |
| !!! | TATTGATTGATCAAATTTTC+AGG | + | tig0030831:44006-44025 | Msa1444820:intron | 20.0% |
| !!! | ATTGATTGATCAAATTTTCA+GGG | + | tig0030831:44007-44026 | Msa1444820:intron | 20.0% |
| !!! | ATTAATTGATCAAATTTTCG+GGG | + | tig0030831:44262-44281 | Msa1444820:intron | 20.0% |
| !!! | TATTGATTGATCAAATTTTC+AGG | + | tig0030831:44006-44025 | Msa1444820:intron | 20.0% |
| !!! | ATTGATTGATCAAATTTTCA+GGG | + | tig0030831:44007-44026 | Msa1444820:intron | 20.0% |
| ! | CAATTTGATTATGTTACCAT+TGG | + | tig0030831:41400-41419 | Msa1444820:intron | 25.0% |
| !! | GAAGAAAGTGTAATATTTCA+TGG | - | tig0030831:41726-41745 | Msa1444820:intergenic | 25.0% |
| ! | TGAAATATTACACTTTCTTC+AGG | + | tig0030831:41726-41745 | Msa1444820:intron | 25.0% |
| ! | GAAATATTACACTTTCTTCA+GGG | + | tig0030831:41727-41746 | Msa1444820:intron | 25.0% |
| ! | TCACTGCAAAAAAATTGTAA+AGG | + | tig0030831:41934-41953 | Msa1444820:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | tig0030831:42537-42556 | Msa1444820:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | tig0030831:42536-42555 | Msa1444820:intergenic | 25.0% |
| ! | AACAAAAAAAAATAAGCCAG+GGG | + | tig0030831:42439-42458 | Msa1444820:intron | 25.0% |
| ! | TCAAATTAACAAAATGGCAT+GGG | - | tig0030831:42479-42498 | Msa1444820:intergenic | 25.0% |
| ! | ATCAAATTAACAAAATGGCA+TGG | - | tig0030831:42480-42499 | Msa1444820:intergenic | 25.0% |
| ! | ACGTCATCAAATTAACAAAA+TGG | - | tig0030831:42485-42504 | Msa1444820:intergenic | 25.0% |
| !!! | ATTTTGTTAATTTGATGACG+TGG | + | tig0030831:42484-42503 | Msa1444820:intron | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | + | tig0030831:42536-42555 | Msa1444820:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | + | tig0030831:42537-42556 | Msa1444820:intron | 25.0% |
| !! | TTTTTCATTAGAGATTTCCT+TGG | - | tig0030831:42780-42799 | Msa1444820:intergenic | 25.0% |
| ! | CAAGCTAACAAAATATTTCA+AGG | - | tig0030831:42913-42932 | Msa1444820:intergenic | 25.0% |
| ! | ATACTTTGATAAACAACATG+AGG | - | tig0030831:43073-43092 | Msa1444820:intergenic | 25.0% |
| !! | CTAGTCCTATATTTTTCTTA+TGG | + | tig0030831:43389-43408 | Msa1444820:intron | 25.0% |
| !! | TGATATGACAATTCCATTTT+TGG | + | tig0030831:43449-43468 | Msa1444820:CDS | 25.0% |
| ! | GGTCATATATAAATCCATAA+TGG | - | tig0030831:43607-43626 | Msa1444820:intergenic | 25.0% |
| !!! | TGTTAATTTTTAAGGCAAAC+CGG | - | tig0030831:43757-43776 | Msa1444820:intergenic | 25.0% |
| ! | ACATGTCAAAACATTCTTTA+GGG | - | tig0030831:44060-44079 | Msa1444820:intergenic | 25.0% |
| ! | AACATGTCAAAACATTCTTT+AGG | - | tig0030831:44061-44080 | Msa1444820:intergenic | 25.0% |
| !!! | AATGTTTTGACATGTTTAGT+AGG | + | tig0030831:44065-44084 | Msa1444820:intron | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+GGG | - | tig0030831:44197-44216 | Msa1444820:intergenic | 25.0% |
| ! | AACATGTCAAAACATTCTTT+AGG | - | tig0030831:44061-44080 | Msa1444820:intergenic | 25.0% |
| !!! | AATGTTTTGACATGTTTAGT+AGG | + | tig0030831:44065-44084 | Msa1444820:intron | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+GGG | - | tig0030831:44197-44216 | Msa1444820:intergenic | 25.0% |
| ! | AACATGTCAAAACATTCTTT+AGG | - | tig0030831:44061-44080 | Msa1444820:intergenic | 25.0% |
| !!! | AATGTTTTGACATGTTTAGT+AGG | + | tig0030831:44065-44084 | Msa1444820:intron | 25.0% |
| ATTGTTCAAGAAATTGCACA+AGG | + | tig0030831:41357-41376 | Msa1444820:CDS | 30.0% | |
| TTCAACATACAGTAAACCAA+TGG | - | tig0030831:41419-41438 | Msa1444820:intergenic | 30.0% | |
| ! | TTTTCATTTCCTGCAAACAA+GGG | - | tig0030831:41463-41482 | Msa1444820:intergenic | 30.0% |
| ! | TTTTTCATTTCCTGCAAACA+AGG | - | tig0030831:41464-41483 | Msa1444820:intergenic | 30.0% |
| TTGTTTGCAGGAAATGAAAA+AGG | + | tig0030831:41463-41482 | Msa1444820:intron | 30.0% | |
| TGTTTGCAGGAAATGAAAAA+GGG | + | tig0030831:41464-41483 | Msa1444820:intron | 30.0% | |
| AATTTGCAGAACTAGTTGAA+AGG | - | tig0030831:41556-41575 | Msa1444820:intergenic | 30.0% | |
| AATTACGTCGTATAGTTCAT+CGG | - | tig0030831:41833-41852 | Msa1444820:intergenic | 30.0% | |
| CAGTTAGTGCTACATATATA+CGG | - | tig0030831:41896-41915 | Msa1444820:intergenic | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | - | tig0030831:42538-42557 | Msa1444820:intergenic | 30.0% | |
| !!! | TTATGGTAATTTTGATGACG+TGG | - | tig0030831:42191-42210 | Msa1444820:intergenic | 30.0% |
| CGTCATCAAAATTACCATAA+TGG | + | tig0030831:42191-42210 | Msa1444820:intron | 30.0% | |
| TCAAAATTACCATAATGGCA+TGG | + | tig0030831:42196-42215 | Msa1444820:intron | 30.0% | |
| CAAAATTACCATAATGGCAT+GGG | + | tig0030831:42197-42216 | Msa1444820:intron | 30.0% | |
| AAGAAAAAAAAATAGCCCAG+GGG | - | tig0030831:42237-42256 | Msa1444820:intergenic | 30.0% | |
| GAAGAAAAAAAAATAGCCCA+GGG | - | tig0030831:42238-42257 | Msa1444820:intergenic | 30.0% | |
| TGAAGAAAAAAAAATAGCCC+AGG | - | tig0030831:42239-42258 | Msa1444820:intergenic | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | + | tig0030831:42538-42557 | Msa1444820:intron | 30.0% | |
| CCTGTAGAAAAAGAAAAGAA+TGG | - | tig0030831:42695-42714 | Msa1444820:intergenic | 30.0% | |
| ! | CCATTCTTTTCTTTTTCTAC+AGG | + | tig0030831:42692-42711 | Msa1444820:intron | 30.0% |
| CACTGCATTGCATAAATATA+TGG | - | tig0030831:42872-42891 | Msa1444820:intergenic | 30.0% | |
| GGAAATATGGATAACTCTAA+GGG | - | tig0030831:42955-42974 | Msa1444820:intergenic | 30.0% | |
| AGGAAATATGGATAACTCTA+AGG | - | tig0030831:42956-42975 | Msa1444820:intergenic | 30.0% | |
| AGTTATCCATATTTCCTCAT+GGG | + | tig0030831:42959-42978 | Msa1444820:CDS | 30.0% | |
| ! | ATATTTCCTCATGGGTTATT+GGG | + | tig0030831:42967-42986 | Msa1444820:CDS | 30.0% |
| TTTGCGAACATTATCATCAT+TGG | - | tig0030831:42993-43012 | Msa1444820:intergenic | 30.0% | |
| GCAGTTATAACATAAGAACT+TGG | + | tig0030831:43189-43208 | Msa1444820:intron | 30.0% | |
| TTAGGGATATCTTTCTTATG+AGG | - | tig0030831:43269-43288 | Msa1444820:intergenic | 30.0% | |
| CAAGATAATCATAGCTGTTA+GGG | - | tig0030831:43286-43305 | Msa1444820:intergenic | 30.0% | |
| ACAAGATAATCATAGCTGTT+AGG | - | tig0030831:43287-43306 | Msa1444820:intergenic | 30.0% | |
| CTTGTAAATCTCAGTAGAAA+AGG | + | tig0030831:43302-43321 | Msa1444820:CDS | 30.0% | |
| GAGTTAACGACTATAACTAT+CGG | - | tig0030831:43570-43589 | Msa1444820:intergenic | 30.0% | |
| !!! | GTTAATTTTTAAGGCAAACC+GGG | - | tig0030831:43756-43775 | Msa1444820:intergenic | 30.0% |
| !!! | ACACCCACTAGTTTTTATTA+AGG | + | tig0030831:44191-44210 | Msa1444820:intron | 30.0% |
| CACACCTTAATAAAAACTAG+TGG | - | tig0030831:44198-44217 | Msa1444820:intergenic | 30.0% | |
| !!! | ACACCCACTAGTTTTTATTA+AGG | + | tig0030831:44191-44210 | Msa1444820:intron | 30.0% |
| CACACCTTAATAAAAACTAG+TGG | - | tig0030831:44198-44217 | Msa1444820:intergenic | 30.0% | |
| GCAATTTCTTGAACAATGAC+AGG | - | tig0030831:41354-41373 | Msa1444820:intergenic | 35.0% | |
| GTTTGCAGGAAATGAAAAAG+GGG | + | tig0030831:41465-41484 | Msa1444820:intron | 35.0% | |
| !! | GATACTTTAAGATGTTGACC+TGG | - | tig0030831:41510-41529 | Msa1444820:intergenic | 35.0% |
| AAGTATCACTCTCTCATGTT+AGG | + | tig0030831:41523-41542 | Msa1444820:intron | 35.0% | |
| GTCGATGCTTTATAGTCTAT+AGG | - | tig0030831:41635-41654 | Msa1444820:intergenic | 35.0% | |
| TTTCTTCAGGGATACTTGTT+GGG | + | tig0030831:41739-41758 | Msa1444820:intron | 35.0% | |
| ! | TACATAGTTTTCCTCCTTTC+TGG | - | tig0030831:41779-41798 | Msa1444820:intergenic | 35.0% |
| ! | TATGTAATCCCTTTTGCTCA+TGG | + | tig0030831:41793-41812 | Msa1444820:CDS | 35.0% |
| AGATATCAGTTCATTCGATG+AGG | + | tig0030831:41999-42018 | Msa1444820:intron | 35.0% | |
| TGTTATTCGTCCCTACAAAT+AGG | + | tig0030831:42066-42085 | Msa1444820:intron | 35.0% | |
| GTTATTCGTCCCTACAAATA+GGG | + | tig0030831:42067-42086 | Msa1444820:intron | 35.0% | |
| TTATTCGTCCCTACAAATAG+GGG | + | tig0030831:42068-42087 | Msa1444820:intron | 35.0% | |
| ! | TAAAAGGATTAGCGATTGCA+GGG | - | tig0030831:42110-42129 | Msa1444820:intergenic | 35.0% |
| ! | ATAAAAGGATTAGCGATTGC+AGG | - | tig0030831:42111-42130 | Msa1444820:intergenic | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | tig0030831:42565-42584 | Msa1444820:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | tig0030831:42566-42585 | Msa1444820:intron | 35.0% |
| TTTGTGTTGAGGAAATTGGT+GGG | - | tig0030831:42807-42826 | Msa1444820:intergenic | 35.0% | |
| ATTTGTGTTGAGGAAATTGG+TGG | - | tig0030831:42808-42827 | Msa1444820:intergenic | 35.0% | |
| GAGATTTGTGTTGAGGAAAT+TGG | - | tig0030831:42811-42830 | Msa1444820:intergenic | 35.0% | |
| ! | GCAATTTGAGATTTGTGTTG+AGG | - | tig0030831:42818-42837 | Msa1444820:intergenic | 35.0% |
| ATTACTCGACAGCTTAAAAG+TGG | - | tig0030831:42840-42859 | Msa1444820:intergenic | 35.0% | |
| ! | AATATGGATAACTCTAAGGG+TGG | - | tig0030831:42952-42971 | Msa1444820:intergenic | 35.0% |
| GAGTTATCCATATTTCCTCA+TGG | + | tig0030831:42958-42977 | Msa1444820:intron | 35.0% | |
| CAATAACCCATGAGGAAATA+TGG | - | tig0030831:42968-42987 | Msa1444820:intergenic | 35.0% | |
| ! | CATATTTCCTCATGGGTTAT+TGG | + | tig0030831:42966-42985 | Msa1444820:CDS | 35.0% |
| GCATTCGTTCACTAATTTAC+AGG | + | tig0030831:43324-43343 | Msa1444820:CDS | 35.0% | |
| ! | ACTACTCCATCATTGATGAT+TGG | + | tig0030831:43499-43518 | Msa1444820:CDS | 35.0% |
| !!! | ATTTTGATTACCCTGCAACT+TGG | - | tig0030831:43545-43564 | Msa1444820:intergenic | 35.0% |
| AGTAGCAAATGTCATCTGAT+TGG | - | tig0030831:43687-43706 | Msa1444820:intergenic | 35.0% | |
| CAATAAGCACTCTTTGATTG+TGG | + | tig0030831:43775-43794 | Msa1444820:intron | 35.0% | |
| ! | TTGTGGTTCATTCTCTAAGA+TGG | + | tig0030831:43792-43811 | Msa1444820:intron | 35.0% |
| !! | GATTGATCAAATTTTCAGGG+TGG | + | tig0030831:44010-44029 | Msa1444820:intron | 35.0% |
| ! | TGTCAAAACATTCTTTAGGG+CGG | - | tig0030831:44057-44076 | Msa1444820:intergenic | 35.0% |
| !! | GTTTTGACATGTTTAGTAGG+TGG | + | tig0030831:44068-44087 | Msa1444820:intron | 35.0% |
| ! | ATATATGTATGGGGTTTGCT+AGG | + | tig0030831:44166-44185 | Msa1444820:intron | 35.0% |
| !!! | GGTGTGTTTTAGCAAAGATT+CGG | + | tig0030831:44212-44231 | Msa1444820:intron | 35.0% |
| !! | AATTGATCAAATTTTCGGGG+TGG | + | tig0030831:44265-44284 | Msa1444820:intron | 35.0% |
| TGTCAAAACATTCTTTAGGC+CGG | - | tig0030831:44312-44331 | Msa1444820:intergenic | 35.0% | |
| !! | GTTTTGACATGTTTAGTAGG+TGG | + | tig0030831:44068-44087 | Msa1444820:intron | 35.0% |
| !!! | GGTGTGTTTTAGCAAAGATT+CGG | + | tig0030831:44212-44231 | Msa1444820:intron | 35.0% |
| !! | GATTGATCAAATTTTCAGGG+TGG | + | tig0030831:44010-44029 | Msa1444820:intron | 35.0% |
| TGTCAAAACATTCTTTAGGC+CGG | - | tig0030831:44312-44331 | Msa1444820:intergenic | 35.0% | |
| !! | GTTTTGACATGTTTAGTAGG+TGG | + | tig0030831:44068-44087 | Msa1444820:intron | 35.0% |
| TCTTGAACAATGACAGGAAC+AGG | - | tig0030831:41348-41367 | Msa1444820:intergenic | 40.0% | |
| ! | TCACAAATTCCCTTGTTTGC+AGG | + | tig0030831:41451-41470 | Msa1444820:intron | 40.0% |
| TTGACCTGGAGATTTATCCA+TGG | - | tig0030831:41496-41515 | Msa1444820:intergenic | 40.0% | |
| CTTTCTTCAGGGATACTTGT+TGG | + | tig0030831:41738-41757 | Msa1444820:intron | 40.0% | |
| ! | TTCTTCAGGGATACTTGTTG+GGG | + | tig0030831:41740-41759 | Msa1444820:intron | 40.0% |
| ! | AATCCCTTTTGCTCATGGAA+TGG | + | tig0030831:41798-41817 | Msa1444820:CDS | 40.0% |
| ! | ATCCCTTTTGCTCATGGAAT+GGG | + | tig0030831:41799-41818 | Msa1444820:CDS | 40.0% |
| TTAAGCGACCCCTATTTGTA+GGG | - | tig0030831:42079-42098 | Msa1444820:intergenic | 40.0% | |
| TTTAAGCGACCCCTATTTGT+AGG | - | tig0030831:42080-42099 | Msa1444820:intergenic | 40.0% | |
| ACTTTGCAGGGGCAAATAAA+AGG | - | tig0030831:42126-42145 | Msa1444820:intergenic | 40.0% | |
| GAATTGACGAAAATACCCCT+GGG | + | tig0030831:42219-42238 | Msa1444820:intron | 40.0% | |
| ! | GCAGTCATTAACTTGGTCAA+GGG | + | tig0030831:42506-42525 | Msa1444820:intron | 40.0% |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | tig0030831:42550-42569 | Msa1444820:intron | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | - | tig0030831:42608-42627 | Msa1444820:intergenic | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | - | tig0030831:42609-42628 | Msa1444820:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | - | tig0030831:42610-42629 | Msa1444820:intergenic | 40.0% | |
| ! | CTTTTTCTACAGGTCACATC+AGG | + | tig0030831:42702-42721 | Msa1444820:intron | 40.0% |
| AGTGGCTTGAAAATTCTCCA+AGG | + | tig0030831:42760-42779 | Msa1444820:CDS | 40.0% | |
| ! | CAAAGCGCTACATATTCAGA+AGG | + | tig0030831:43009-43028 | Msa1444820:CDS | 40.0% |
| CATGCTTGTGTTGCCAAAAA+TGG | - | tig0030831:43465-43484 | Msa1444820:intergenic | 40.0% | |
| !!! | CATTTTTGGCAACACAAGCA+TGG | + | tig0030831:43463-43482 | Msa1444820:CDS | 40.0% |
| CTGTCTCCAATCATCAATGA+TGG | - | tig0030831:43508-43527 | Msa1444820:intergenic | 40.0% | |
| ! | TCATTGATGATTGGAGACAG+TGG | + | tig0030831:43508-43527 | Msa1444820:CDS | 40.0% |
| ATACTGATGACCAAGTTGCA+GGG | + | tig0030831:43532-43551 | Msa1444820:CDS | 40.0% | |
| TGTGCAAGTGTAGATACACA+AGG | + | tig0030831:43654-43673 | Msa1444820:intron | 40.0% | |
| ! | GATGACATTTGCTACTGTGA+AGG | + | tig0030831:43691-43710 | Msa1444820:CDS | 40.0% |
| !!! | ATTTTTAAGGCAAACCGGGT+GGG | - | tig0030831:43752-43771 | Msa1444820:intergenic | 40.0% |
| !!! | AATTTTTAAGGCAAACCGGG+TGG | - | tig0030831:43753-43772 | Msa1444820:intergenic | 40.0% |
| !! | TGATCAAATTTTCAGGGTGG+AGG | + | tig0030831:44013-44032 | Msa1444820:intron | 40.0% |
| !! | TGATCAAATTTTCAGGGTGG+AGG | + | tig0030831:44013-44032 | Msa1444820:intron | 40.0% |
| ATTGCTGGTGACTCATACTC+TGG | + | tig0030831:41318-41337 | Msa1444820:CDS | 45.0% | |
| ATGAAAAAGGGGTCCAACCA+TGG | + | tig0030831:41476-41495 | Msa1444820:CDS | 45.0% | |
| CCTGGAGATTTATCCATGGT+TGG | - | tig0030831:41492-41511 | Msa1444820:intergenic | 45.0% | |
| CCAACCATGGATAAATCTCC+AGG | + | tig0030831:41489-41508 | Msa1444820:CDS | 45.0% | |
| GAATGCTGCAACAACCAGAA+AGG | + | tig0030831:41762-41781 | Msa1444820:CDS | 45.0% | |
| GTCCCATTCCATGAGCAAAA+GGG | - | tig0030831:41804-41823 | Msa1444820:intergenic | 45.0% | |
| AGTCCCATTCCATGAGCAAA+AGG | - | tig0030831:41805-41824 | Msa1444820:intergenic | 45.0% | |
| GCAGTCATTAACTGGGTCAA+GGG | - | tig0030831:42169-42188 | Msa1444820:intergenic | 45.0% | |
| TGACGTGGCAGTCATTAACT+GGG | - | tig0030831:42499-42518 | Msa1444820:intergenic | 45.0% | |
| ATGACGTGGCAGTCATTAAC+TGG | - | tig0030831:42498-42517 | Msa1444820:intergenic | 45.0% | |
| CGTCAATTCCCATGCCATTA+TGG | - | tig0030831:42208-42227 | Msa1444820:intergenic | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | + | tig0030831:42218-42237 | Msa1444820:intron | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | - | tig0030831:42218-42237 | Msa1444820:intergenic | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | + | tig0030831:42499-42518 | Msa1444820:intron | 45.0% | |
| ! | GGCAGTCATTAACTTGGTCA+AGG | + | tig0030831:42505-42524 | Msa1444820:intron | 45.0% |
| TTTAAGCGACCCCTATTTGC+AGG | + | tig0030831:42596-42615 | Msa1444820:intron | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | + | tig0030831:42597-42616 | Msa1444820:intron | 45.0% | |
| !! | TTTTCAAGCCACTCGCAACT+CGG | - | tig0030831:42753-42772 | Msa1444820:intergenic | 45.0% |
| ! | GGATAACTCTAAGGGTGGAA+AGG | - | tig0030831:42947-42966 | Msa1444820:intergenic | 45.0% |
| CACATTCGTGCGAGATTACA+AGG | + | tig0030831:43150-43169 | Msa1444820:intron | 45.0% | |
| AACTTGGTTGCATGTGTTGC+AGG | + | tig0030831:43205-43224 | Msa1444820:intron | 45.0% | |
| ACTTGGTTGCATGTGTTGCA+GGG | + | tig0030831:43206-43225 | Msa1444820:intron | 45.0% | |
| CATACTGATGACCAAGTTGC+AGG | + | tig0030831:43531-43550 | Msa1444820:CDS | 45.0% | |
| !! | TGATCAAATTTTCGGGGTGG+AGG | + | tig0030831:44268-44287 | Msa1444820:intron | 45.0% |
| !!! | ATGTTTATTTTATTTTATTT+TGG | + | tig0030831:42035-42054 | Msa1444820:intron | 5.0% |
| !! | TATATATATATATATATGTA+TGG | + | tig0030831:44155-44174 | Msa1444820:intron | 5.0% |
| !! | ATATATATATATATATGTAT+GGG | + | tig0030831:44156-44175 | Msa1444820:intron | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | tig0030831:44153-44172 | Msa1444820:intron | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | tig0030831:44153-44172 | Msa1444820:intron | 5.0% |
| TGCTGCAACAACCAGAAAGG+AGG | + | tig0030831:41765-41784 | Msa1444820:CDS | 50.0% | |
| GGCAGTCATTAACTGGGTCA+AGG | - | tig0030831:42170-42189 | Msa1444820:intergenic | 50.0% | |
| ! | TTTTAGACCCGAGTTGCGAG+TGG | + | tig0030831:42742-42761 | Msa1444820:CDS | 50.0% |
| TTTCAAGCCACTCGCAACTC+GGG | - | tig0030831:42752-42771 | Msa1444820:intergenic | 50.0% | |
| CATTGGCCCAATAACCCATG+AGG | - | tig0030831:42976-42995 | Msa1444820:intergenic | 50.0% | |
| !! | TGCAGGGAAGTGTTGCGAAA+TGG | + | tig0030831:43222-43241 | Msa1444820:intron | 50.0% |
| AATGGTTGATTGAGCCCACC+CGG | + | tig0030831:43735-43754 | Msa1444820:intron | 50.0% | |
| !! | CATTCTTTAGGGCGGTACTC+TGG | - | tig0030831:44049-44068 | Msa1444820:intergenic | 50.0% |
| CATTCTTTAGGCCGGTACTC+TGG | - | tig0030831:44304-44323 | Msa1444820:intergenic | 50.0% | |
| CATTCTTTAGGCCGGTACTC+TGG | - | tig0030831:44304-44323 | Msa1444820:intergenic | 50.0% | |
| GACACACAGCTCCAGAGTAC+CGG | + | tig0030831:44035-44054 | Msa1444820:intron | 55.0% | |
| GACACACAGCTCCAGAGTAC+CGG | + | tig0030831:44035-44054 | Msa1444820:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030831 | gene | 41315 | 44718 | 41315 | ID=Msa1444820;Name=Msa1444820 |
| tig0030831 | mRNA | 41315 | 44718 | 41315 | ID=Msa1444820-mRNA-1;Parent=Msa1444820;Name=Msa1444820-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.62|0.66|1|0.87|0.77|9|63|242 |
| tig0030831 | exon | 41315 | 41378 | 41315 | ID=Msa1444820-mRNA-1:exon:14662;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 41473 | 41510 | 41473 | ID=Msa1444820-mRNA-1:exon:14663;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 41748 | 41846 | 41748 | ID=Msa1444820-mRNA-1:exon:14664;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 42714 | 42854 | 42714 | ID=Msa1444820-mRNA-1:exon:14665;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 42959 | 43030 | 42959 | ID=Msa1444820-mRNA-1:exon:14666;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 43275 | 43345 | 43275 | ID=Msa1444820-mRNA-1:exon:14667;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 43440 | 43553 | 43440 | ID=Msa1444820-mRNA-1:exon:14668;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 43667 | 43712 | 43667 | ID=Msa1444820-mRNA-1:exon:14669;Parent=Msa1444820-mRNA-1 |
| tig0030831 | exon | 44572 | 44718 | 44572 | ID=Msa1444820-mRNA-1:exon:14670;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 41315 | 41378 | 41315 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 41473 | 41510 | 41473 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 41748 | 41846 | 41748 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 42714 | 42854 | 42714 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 42959 | 43030 | 42959 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 43275 | 43345 | 43275 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 43440 | 43553 | 43440 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 43667 | 43712 | 43667 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | CDS | 44572 | 44655 | 44572 | ID=Msa1444820-mRNA-1:cds;Parent=Msa1444820-mRNA-1 |
| tig0030831 | three_prime_UTR | 44656 | 44718 | 44656 | ID=Msa1444820-mRNA-1:three_prime_utr;Parent=Msa1444820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
