Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445320 | A0A072TTW9 | 92.461 | 955 | 62 | 5 | 1 | 950 | 1 | 950 | 0.0 | 1747 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1445320 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1301980 | Msa1445320 | 0.810945 | 8.955553e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445320 | MtrunA17_Chr8g0377811 | 92.461 | 955 | 62 | 5 | 1 | 950 | 1 | 950 | 0.0 | 1747 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445320 | AT4G14200.1 | 42.623 | 122 | 62 | 6 | 829 | 945 | 665 | 783 | 1.36e-16 | 85.5 |
| Msa1445320 | AT4G14200.1 | 39.831 | 118 | 54 | 4 | 1 | 104 | 1 | 115 | 4.13e-14 | 77.4 |
Find 195 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTGTTCTTATGGATTC+TGG | 0.185373 | tig0031043:+10655 | Msa1445320:three_prime_UTR |
| ATCATCTGAACCATTGAAAT+TGG | 0.207181 | tig0031043:-6556 | Msa1445320:intergenic |
| AATTGAAGAGCAGACCATTT+TGG | 0.229250 | tig0031043:+10564 | Msa1445320:CDS |
| TATTTGCTCTCCTGTTCTTA+TGG | 0.233152 | tig0031043:+10648 | Msa1445320:three_prime_UTR |
| AGCAATCAAGTGAGTTATTT+AGG | 0.233180 | tig0031043:+9283 | Msa1445320:CDS |
| CACACCTCTCAAGAGTCTTT+TGG | 0.235302 | tig0031043:+10352 | Msa1445320:CDS |
| TGAGCCTCGTTCGTGATTAT+TGG | 0.239007 | tig0031043:-8622 | Msa1445320:intergenic |
| TCTGCAATTGAGCTTGTTAA+TGG | 0.247434 | tig0031043:-8199 | Msa1445320:intergenic |
| TCTGCTCTGGTTTGTTATCT+TGG | 0.248157 | tig0031043:-10318 | Msa1445320:intergenic |
| ACAACTGTTAACTCAATTCT+TGG | 0.264032 | tig0031043:+10440 | Msa1445320:CDS |
| CTTCTTGAGGAAATTCATAC+TGG | 0.270881 | tig0031043:-8591 | Msa1445320:intergenic |
| TTGGAAGGCAACTGGGGTTC+TGG | 0.273219 | tig0031043:+9870 | Msa1445320:CDS |
| TCAACCTGAAAGTAGTTTAA+TGG | 0.282089 | tig0031043:+9065 | Msa1445320:CDS |
| GGCAACTGGGGTTCTGGTTC+AGG | 0.286704 | tig0031043:+9876 | Msa1445320:CDS |
| GAGACCATTAAACTACTTTC+AGG | 0.293411 | tig0031043:-9069 | Msa1445320:intergenic |
| TCATCAGGTCCATGCTCTTC+AGG | 0.294935 | tig0031043:-9027 | Msa1445320:intergenic |
| GTTTCAGAAGTGGCGCCTTT+AGG | 0.301690 | tig0031043:-10194 | Msa1445320:intergenic |
| TTGGTTAAACTTGGTTCATC+TGG | 0.315047 | tig0031043:+9576 | Msa1445320:CDS |
| CACCACTTCTTTCACTCAAC+TGG | 0.316368 | tig0031043:-8840 | Msa1445320:intergenic |
| AGATTGCTCTGAAGTTTCTT+TGG | 0.316918 | tig0031043:+8924 | Msa1445320:CDS |
| AGTGATGATGCTGGTGAAAA+TGG | 0.321257 | tig0031043:+9312 | Msa1445320:CDS |
| CACATTCTTCTATAAATTCC+GGG | 0.326461 | tig0031043:+9685 | Msa1445320:CDS |
| ATAGAAGAAAATAATGGTTC+TGG | 0.341669 | tig0031043:+10413 | Msa1445320:CDS |
| TGCTGAGCTTTCTGCTGAAC+CGG | 0.343047 | tig0031043:+9494 | Msa1445320:CDS |
| TCACATTCTTCTATAAATTC+CGG | 0.344140 | tig0031043:+9684 | Msa1445320:CDS |
| CGTAATAACTTGGTTAAACT+TGG | 0.352616 | tig0031043:+9567 | Msa1445320:CDS |
| TCCTCCTTTCTTTCTTTCGT+TGG | 0.360984 | tig0031043:+6113 | Msa1445320:five_prime_UTR |
| TTAGCACTGGGATGTGGATT+TGG | 0.364827 | tig0031043:-6474 | Msa1445320:intergenic |
| TTGATAACCTGATTTAAAGT+TGG | 0.365804 | tig0031043:-10257 | Msa1445320:intergenic |
| TTGGTTCCCAACTTTAAATC+AGG | 0.365895 | tig0031043:+10250 | Msa1445320:CDS |
| ATATTTGCAGGATATCTTGC+TGG | 0.373211 | tig0031043:-10524 | Msa1445320:intergenic |
| GTGACAGTTTGGAAGGCAAC+TGG | 0.374572 | tig0031043:+9862 | Msa1445320:CDS |
| CTCTTCAGAGATGCATGTTA+TGG | 0.379248 | tig0031043:+8867 | Msa1445320:CDS |
| TGATAACCTGATTTAAAGTT+GGG | 0.381863 | tig0031043:-10256 | Msa1445320:intergenic |
| CAAGTTTAACCAAGTTATTA+CGG | 0.395077 | tig0031043:-9566 | Msa1445320:intergenic |
| AGAAGAGGATAATGATGAAA+TGG | 0.399930 | tig0031043:-6078 | Msa1445320:intergenic |
| GTCAACTGAAACATCAGTTC+CGG | 0.400096 | tig0031043:-9826 | Msa1445320:intergenic |
| AGTACCTGGAGTGTGAGTTT+TGG | 0.401290 | tig0031043:-6197 | Msa1445320:intergenic |
| TGCTGACTCGCACGAAGAAC+AGG | 0.402380 | tig0031043:+9404 | Msa1445320:CDS |
| TCTGCTGTTGAAGATAATTC+AGG | 0.412258 | tig0031043:+9726 | Msa1445320:CDS |
| GCTGTTGAAGATGATTCAAT+TGG | 0.412706 | tig0031043:+9522 | Msa1445320:CDS |
| GAGTAAGTTGAGAGTGGTAG+TGG | 0.413303 | tig0031043:-5972 | Msa1445320:intergenic |
| TGTTGTTTGTTAGAGAAAGA+AGG | 0.416688 | tig0031043:-5997 | Msa1445320:intergenic |
| CAAACCAACTGTATCCAAAA+TGG | 0.416729 | tig0031043:-10578 | Msa1445320:intergenic |
| TGTGCTCTTTACTTCTGCTC+TGG | 0.421478 | tig0031043:-10331 | Msa1445320:intergenic |
| TTCTGTCGATGCCAGCGAAC+CGG | 0.422453 | tig0031043:-10048 | Msa1445320:intergenic |
| AAAAGACAGGGTTGAAATCA+TGG | 0.423875 | tig0031043:+8423 | Msa1445320:CDS |
| GGGTAGCCGGCGTGACAGTT+TGG | 0.425657 | tig0031043:+9851 | Msa1445320:CDS |
| TTTGATCTTGGTGATGCATT+AGG | 0.427053 | tig0031043:-6174 | Msa1445320:intergenic |
| TCTGTAGTTGGAAAGGTTGC+AGG | 0.429209 | tig0031043:+9186 | Msa1445320:CDS |
| TCTCAGCAGGTGCAGCTTGT+CGG | 0.429317 | tig0031043:-10094 | Msa1445320:intergenic |
| GAACTTTCATGAATTTCATC+AGG | 0.435012 | tig0031043:-9042 | Msa1445320:intergenic |
| GGTGATTTCGGCTTGTTGCT+AGG | 0.438775 | tig0031043:-10386 | Msa1445320:intergenic |
| TTACGGCGTTGATCTTGAAC+AGG | 0.439745 | tig0031043:-9549 | Msa1445320:intergenic |
| CATCGCCCATGTCATGATCC+AGG | 0.443193 | tig0031043:-8516 | Msa1445320:intergenic |
| GAAGAACAAACCAATTTCAA+TGG | 0.450290 | tig0031043:+6546 | Msa1445320:CDS |
| CCAGACAGCTGTCTCTCAGC+AGG | 0.450792 | tig0031043:-10107 | Msa1445320:intergenic |
| AACAATGACAAGGGTAATGA+TGG | 0.452738 | tig0031043:+6757 | Msa1445320:CDS |
| CATACTGGGGCAGCAAAGAA+AGG | 0.454900 | tig0031043:-8576 | Msa1445320:intergenic |
| GTGGAAACTTTACCATCAAC+CGG | 0.458357 | tig0031043:+10029 | Msa1445320:CDS |
| AGATCAACGCCGTAATAACT+TGG | 0.462206 | tig0031043:+9557 | Msa1445320:CDS |
| TTATTGCTTTGATCATCAAC+CGG | 0.463154 | tig0031043:-9780 | Msa1445320:intergenic |
| AGTCAACGAAAGAAAAGAAA+AGG | 0.463941 | tig0031043:-6136 | Msa1445320:intergenic |
| CCTGCTGAGAGACAGCTGTC+TGG | 0.465983 | tig0031043:+10107 | Msa1445320:CDS |
| TAACCAGAATCCATAAGAAC+AGG | 0.469649 | tig0031043:-10658 | Msa1445320:intergenic |
| AATAATCACGAACGAGGCTC+AGG | 0.471738 | tig0031043:+8624 | Msa1445320:CDS |
| TTCAGAGGGAGGCATCCTTT+CGG | 0.472376 | tig0031043:+9103 | Msa1445320:CDS |
| TGTTTCAATGACACGCTCTC+AGG | 0.473508 | tig0031043:-8772 | Msa1445320:intergenic |
| TCATCTTCAACAGCGGAATC+CGG | 0.474680 | tig0031043:-9513 | Msa1445320:intergenic |
| TCGCTGGCATCGACAGAAGC+AGG | 0.479023 | tig0031043:+10053 | Msa1445320:CDS |
| TCAACTGAAACATCAGTTCC+GGG | 0.479326 | tig0031043:-9825 | Msa1445320:intergenic |
| CTATGTTTAGCACTGGGATG+TGG | 0.480805 | tig0031043:-6480 | Msa1445320:intergenic |
| GAGTCAACTGATAACGTTGT+AGG | 0.484509 | tig0031043:+8445 | Msa1445320:CDS |
| GATGCCAGCGAACCGGTTGA+TGG | 0.485197 | tig0031043:-10041 | Msa1445320:intergenic |
| AAATGTGACAGATTGTAGTT+TGG | 0.486137 | tig0031043:+8348 | Msa1445320:CDS |
| ATTCTCTATCGTTAACACTT+AGG | 0.486196 | tig0031043:+10771 | Msa1445320:three_prime_UTR |
| AGCACGTCTATGTTTAGCAC+TGG | 0.486588 | tig0031043:-6487 | Msa1445320:intergenic |
| ATAAACGATGCATCTGTAGT+TGG | 0.487241 | tig0031043:+9174 | Msa1445320:CDS |
| AACTGATGTTTCAGTTGACT+CGG | 0.491776 | tig0031043:+9830 | Msa1445320:CDS |
| AGTAAGTTGAGAGTGGTAGT+GGG | 0.493488 | tig0031043:-5971 | Msa1445320:intergenic |
| TAGTTTGGTGTGTGATGAAA+AGG | 0.493906 | tig0031043:+8363 | Msa1445320:CDS |
| TTTACCATCAACCGGTTCGC+TGG | 0.495747 | tig0031043:+10037 | Msa1445320:CDS |
| TAGAGAATACTATGAAACTT+TGG | 0.498238 | tig0031043:-10756 | Msa1445320:intergenic |
| CTGGGATGTGGATTTGGAAA+AGG | 0.498306 | tig0031043:-6468 | Msa1445320:intergenic |
| AAGAAAAGGCTGCAAATGAA+TGG | 0.500017 | tig0031043:+10495 | Msa1445320:CDS |
| AAGTGACACTGAAGTTATAG+TGG | 0.500415 | tig0031043:+9221 | Msa1445320:CDS |
| AAGGCCAACGAAAGAAAGAA+AGG | 0.506117 | tig0031043:-6117 | Msa1445320:intergenic |
| TTCACCACTTGAGTCGCTGA+AGG | 0.507100 | tig0031043:-10473 | Msa1445320:intergenic |
| TCAACCAATGTTGTGAAAGA+TGG | 0.508206 | tig0031043:-10152 | Msa1445320:intergenic |
| TTGCTTGAGCTAGCAATAAG+TGG | 0.508743 | tig0031043:-8076 | Msa1445320:intergenic |
| AAGATCTGTGGAATCATTGA+AGG | 0.513923 | tig0031043:+6516 | Msa1445320:CDS |
| TCGAGCATTGTGCATGGCGA+TGG | 0.514932 | tig0031043:+8238 | Msa1445320:CDS |
| TTATCATCAAGCACAGGAAG+TGG | 0.515486 | tig0031043:-8733 | Msa1445320:intergenic |
| CTGGATCATGACATGGGCGA+TGG | 0.517009 | tig0031043:+8517 | Msa1445320:CDS |
| AGCCACGTGGCTAGTCCTAA+AGG | 0.521301 | tig0031043:+10179 | Msa1445320:CDS |
| TTTCAGTTGACTCGGGTAGC+CGG | 0.521684 | tig0031043:+9838 | Msa1445320:CDS |
| GTAAGTTGAGAGTGGTAGTG+GGG | 0.521857 | tig0031043:-5970 | Msa1445320:intergenic |
| AGTCAAATTCCACCTCTAGT+TGG | 0.527035 | tig0031043:+10231 | Msa1445320:CDS |
| CCGAAGGAAAAGAAGGAACC+CGG | 0.527276 | tig0031043:+8550 | Msa1445320:CDS |
| TTCTTGAGGAAATTCATACT+GGG | 0.527999 | tig0031043:-8590 | Msa1445320:intergenic |
| ATTGGCGAGTTTACTTCTTG+AGG | 0.530675 | tig0031043:-8604 | Msa1445320:intergenic |
| TGCTGACTCACATGAAGCAC+GGG | 0.531804 | tig0031043:+9611 | Msa1445320:CDS |
| TGTTTGTTAGAGAAAGAAGG+AGG | 0.533028 | tig0031043:-5994 | Msa1445320:intergenic |
| GAAAAGGAGCTTAATTTGAA+AGG | 0.533754 | tig0031043:+8379 | Msa1445320:CDS |
| AAGGAGGAGTAAGTTGAGAG+TGG | 0.535658 | tig0031043:-5978 | Msa1445320:intergenic |
| CGATGCATCTGTAGTTGGAA+AGG | 0.537909 | tig0031043:+9179 | Msa1445320:CDS |
| TGACAGTTTGGAAGGCAACT+GGG | 0.539280 | tig0031043:+9863 | Msa1445320:CDS |
| CCTTGACTTAGTCCACTATC+CGG | 0.539328 | tig0031043:-6841 | Msa1445320:intergenic |
| ATCAGTAACAGCTGGTACAT+CGG | 0.543249 | tig0031043:-10006 | Msa1445320:intergenic |
| TGTTAATCCGAAGGAAAAGA+AGG | 0.543340 | tig0031043:+8543 | Msa1445320:CDS |
| GACTCAAGTGGTGAAAGAAA+AGG | 0.544512 | tig0031043:+10481 | Msa1445320:CDS |
| TTAGGACTAGCCACGTGGCT+AGG | 0.544783 | tig0031043:-10176 | Msa1445320:intergenic |
| TTTGAAGTGGGAAATATAGG+TGG | 0.546310 | tig0031043:+8142 | Msa1445320:CDS |
| AGGATAATGATGAAATGGAA+TGG | 0.546847 | tig0031043:-6073 | Msa1445320:intergenic |
| AGTTAACGAAGCAATTTCCC+TGG | 0.547977 | tig0031043:+8498 | Msa1445320:CDS |
| GGCAGCAAAGAAAGGGACCC+GGG | 0.548076 | tig0031043:-8568 | Msa1445320:intergenic |
| GCTGCCATCTTTCACAACAT+TGG | 0.550986 | tig0031043:+10148 | Msa1445320:CDS |
| TGAGTCGCTGAAGGGGACTC+AGG | 0.552611 | tig0031043:-10464 | Msa1445320:intergenic |
| GGGACGCAAAGTCAATTGCC+AGG | 0.557599 | tig0031043:+8163 | Msa1445320:CDS |
| TACTACTTGTAATGAAGTCG+AGG | 0.558553 | tig0031043:+8672 | Msa1445320:CDS |
| AATGGATCCACAGTAGAGCC+TGG | 0.560545 | tig0031043:-8181 | Msa1445320:intergenic |
| TCACCACTTGAGTCGCTGAA+GGG | 0.563624 | tig0031043:-10472 | Msa1445320:intergenic |
| TTCTGGCAATAAATTGGGCA+CGG | 0.564926 | tig0031043:-8305 | Msa1445320:intergenic |
| TTGAAGTGGGAAATATAGGT+GGG | 0.565529 | tig0031043:+8143 | Msa1445320:CDS |
| CTGCTGACTCACATGAAGCA+CGG | 0.565776 | tig0031043:+9610 | Msa1445320:CDS |
| GTGATGTATACTTGCTGGCA+AGG | 0.567164 | tig0031043:-9665 | Msa1445320:intergenic |
| AGAATGTGATGTATACTTGC+TGG | 0.568221 | tig0031043:-9670 | Msa1445320:intergenic |
| GCTCAACTTCTGATTGCAAG+TGG | 0.572874 | tig0031043:-9263 | Msa1445320:intergenic |
| AAAGGTTGCAGGAGCAGATG+TGG | 0.573435 | tig0031043:+9197 | Msa1445320:CDS |
| AGCCGGCGTGACAGTTTGGA+AGG | 0.576510 | tig0031043:+9855 | Msa1445320:CDS |
| ATACTGGGGCAGCAAAGAAA+GGG | 0.576595 | tig0031043:-8575 | Msa1445320:intergenic |
| AGTTACTGCTGTGCTAATGC+CGG | 0.577011 | tig0031043:+9761 | Msa1445320:CDS |
| ATCATGTCGAGCAGAAGCCC+CGG | 0.577061 | tig0031043:-9703 | Msa1445320:intergenic |
| AGGAATAATAGTGATGATGC+TGG | 0.577648 | tig0031043:+9303 | Msa1445320:CDS |
| ATTTAGTAGATCAGAAAGTG+AGG | 0.578447 | tig0031043:+6792 | Msa1445320:CDS |
| CACCACTTGAGTCGCTGAAG+GGG | 0.579229 | tig0031043:-10471 | Msa1445320:intergenic |
| ATGTGTGTCACAAATGTGGT+TGG | 0.583107 | tig0031043:+6445 | Msa1445320:CDS |
| TTCATCAGTCGCAGACCGAA+AGG | 0.585441 | tig0031043:-9118 | Msa1445320:intergenic |
| GAAGAGAATAAGAAACCGAC+TGG | 0.585709 | tig0031043:+9375 | Msa1445320:CDS |
| CAAGAACATAATTTGAACTC+AGG | 0.586642 | tig0031043:+6883 | Msa1445320:CDS |
| CCGGATAGTGGACTAAGTCA+AGG | 0.586744 | tig0031043:+6841 | Msa1445320:CDS |
| AATTTCCCTGGATCATGACA+TGG | 0.586997 | tig0031043:+8510 | Msa1445320:CDS |
| AGTTGGGAACCAACTAGAGG+TGG | 0.591505 | tig0031043:-10240 | Msa1445320:intergenic |
| GTTTCCACATCAGTAACAGC+TGG | 0.593550 | tig0031043:-10014 | Msa1445320:intergenic |
| GGGCAGCAAAGAAAGGGACC+CGG | 0.593719 | tig0031043:-8569 | Msa1445320:intergenic |
| GTTGGTTTGTTGCACAACAG+TGG | 0.595090 | tig0031043:+10592 | Msa1445320:CDS |
| GATATCCTGCAAATATCAAG+AGG | 0.596718 | tig0031043:+10531 | Msa1445320:CDS |
| TTGACTAAATTAACTCCACC+CGG | 0.597180 | tig0031043:+9807 | Msa1445320:CDS |
| GGATGAACAGCTATCAGTGA+AGG | 0.597595 | tig0031043:+9425 | Msa1445320:CDS |
| GTCCCCTTCAGCGACTCAAG+TGG | 0.599673 | tig0031043:+10469 | Msa1445320:CDS |
| AGGGTAATGATGGAATTGAA+AGG | 0.601216 | tig0031043:+6767 | Msa1445320:CDS |
| GCACGTCTATGTTTAGCACT+GGG | 0.604128 | tig0031043:-6486 | Msa1445320:intergenic |
| CGATGGAGCTGTTAATCCGA+AGG | 0.607106 | tig0031043:+8534 | Msa1445320:CDS |
| ACTGATGTTTCAGTTGACTC+GGG | 0.608243 | tig0031043:+9831 | Msa1445320:CDS |
| TCAAGTTTATCATCAAGCAC+AGG | 0.613457 | tig0031043:-8739 | Msa1445320:intergenic |
| CTCAGCAAATGAATTTCAGA+GGG | 0.613657 | tig0031043:+9089 | Msa1445320:CDS |
| GAGGTGGAATTTGACTGTTG+TGG | 0.613942 | tig0031043:-10224 | Msa1445320:intergenic |
| ATCGCCCATGTCATGATCCA+GGG | 0.615636 | tig0031043:-8515 | Msa1445320:intergenic |
| GTTGTAGGTGAAACATATGA+AGG | 0.617101 | tig0031043:+8460 | Msa1445320:CDS |
| AATTGAATCATCTTCAACAG+CGG | 0.617528 | tig0031043:-9520 | Msa1445320:intergenic |
| GACAGTTTGGAAGGCAACTG+GGG | 0.618249 | tig0031043:+9864 | Msa1445320:CDS |
| TAATGATGAAATGGAATGGA+AGG | 0.618859 | tig0031043:-6069 | Msa1445320:intergenic |
| CAAACCAAAACTCACACTCC+AGG | 0.620575 | tig0031043:+6193 | Msa1445320:CDS |
| GAAGAATCGAGCATTGTGCA+TGG | 0.624518 | tig0031043:+8232 | Msa1445320:CDS |
| GTTTATGTGTGTCACAAATG+TGG | 0.626539 | tig0031043:+6441 | Msa1445320:CDS |
| CGTGCTCACAAGAAGATCTG+TGG | 0.627206 | tig0031043:+6504 | Msa1445320:CDS |
| AGCAAATGAATTTCAGAGGG+AGG | 0.627525 | tig0031043:+9092 | Msa1445320:CDS |
| ACATTCTTCTATAAATTCCG+GGG | 0.628281 | tig0031043:+9686 | Msa1445320:CDS |
| TAAAGTTGGGAACCAACTAG+AGG | 0.635232 | tig0031043:-10243 | Msa1445320:intergenic |
| CGCCTTTAGGACTAGCCACG+TGG | 0.638553 | tig0031043:-10181 | Msa1445320:intergenic |
| TCAATTGCCAGGCTCTACTG+TGG | 0.639109 | tig0031043:+8174 | Msa1445320:CDS |
| GAGCGTGTCATTGAAACATG+AGG | 0.641062 | tig0031043:+8777 | Msa1445320:CDS |
| TCTCAGCAAATGAATTTCAG+AGG | 0.641846 | tig0031043:+9088 | Msa1445320:CDS |
| GGATGCACAACTGTTAGTGA+AGG | 0.645045 | tig0031043:+9632 | Msa1445320:CDS |
| CGAAGGAAAAGAAGGAACCC+GGG | 0.646280 | tig0031043:+8551 | Msa1445320:CDS |
| TGTACCAGCTGTTACTGATG+TGG | 0.648372 | tig0031043:+10010 | Msa1445320:CDS |
| GCCAACGAAAGAAAGAAAGG+AGG | 0.652057 | tig0031043:-6114 | Msa1445320:intergenic |
| AACCAGTTGAGTGAAAGAAG+TGG | 0.653078 | tig0031043:+8838 | Msa1445320:CDS |
| GTTGGGTTCAAACAATGACA+AGG | 0.660340 | tig0031043:+6747 | Msa1445320:CDS |
| TAACATGCATCTCTGAAGAG+AGG | 0.662096 | tig0031043:-8864 | Msa1445320:intergenic |
| CAACAGTGGATCCTCAGCGA+AGG | 0.662422 | tig0031043:+10606 | Msa1445320:CDS |
| TCACCCAAAAGACTCTTGAG+AGG | 0.662449 | tig0031043:-10356 | Msa1445320:intergenic |
| ATTTCCCTGGATCATGACAT+GGG | 0.666282 | tig0031043:+8511 | Msa1445320:CDS |
| TCTTGAGGAAATTCATACTG+GGG | 0.669903 | tig0031043:-8589 | Msa1445320:intergenic |
| ACATGAGGAACATGTTACTG+AGG | 0.675935 | tig0031043:+8792 | Msa1445320:CDS |
| TGCCTTCCAAACTGTCACGC+CGG | 0.676751 | tig0031043:-9857 | Msa1445320:intergenic |
| ATATCCTGCAAATATCAAGA+GGG | 0.682748 | tig0031043:+10532 | Msa1445320:CDS |
| TAATTTGAAAGGAAGCGATG+AGG | 0.691934 | tig0031043:+8390 | Msa1445320:CDS |
| CTCGCCAATAATCACGAACG+AGG | 0.692947 | tig0031043:+8618 | Msa1445320:CDS |
| GATGATGATTACAAAACACC+AGG | 0.694441 | tig0031043:+6573 | Msa1445320:CDS |
| TTGGGTTCAAACAATGACAA+GGG | 0.695404 | tig0031043:+6748 | Msa1445320:CDS |
| GATTGCAAGTGGTCACTACG+AGG | 0.698031 | tig0031043:-9252 | Msa1445320:intergenic |
| GAGTCAGCAGCAATACCAGT+CGG | 0.699186 | tig0031043:-9390 | Msa1445320:intergenic |
| ATTGGTTGAGCCTAGCCACG+TGG | 0.726239 | tig0031043:+10166 | Msa1445320:CDS |
| ACTGAAACATCAGTTCCGGG+TGG | 0.735985 | tig0031043:-9822 | Msa1445310:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGGAATATTAATAAAAA+CGG | - | tig0031043:6033-6052 | Msa1053850:intergenic | 10.0% |
| !!! | TTTTTGTGTATTTTTTTTTA+AGG | + | tig0031043:6402-6421 | Msa1445320:intron | 10.0% |
| !!! | TTTTGTGTATTTTTTTTTAA+GGG | + | tig0031043:6403-6422 | Msa1445320:intron | 10.0% |
| !!! | TAATTTTTGGATTTATAATT+TGG | - | tig0031043:8108-8127 | Msa1445320:intergenic | 10.0% |
| !!! | ATTTATTTATTTCTCTTTCT+TGG | + | tig0031043:6263-6282 | Msa1445320:intron | 15.0% |
| !!! | TTTAATTTAACATTGTTGTT+GGG | + | tig0031043:6622-6641 | Msa1445320:intron | 15.0% |
| !!! | ATAATGTGTTGATATTTTTT+AGG | + | tig0031043:6715-6734 | Msa1445320:intron | 15.0% |
| !! | TTAAATAACACTCATAAAAA+GGG | - | tig0031043:7207-7226 | Msa1445320:intergenic | 15.0% |
| !!! | AAGTCATTAAATTTTAAACA+AGG | - | tig0031043:7259-7278 | Msa1445320:intergenic | 15.0% |
| !!! | GTTTAAAATTTAATGACTTT+AGG | + | tig0031043:7260-7279 | Msa1445320:intron | 15.0% |
| !! | TTGTAGATTGTAATATAAAT+TGG | - | tig0031043:7887-7906 | Msa1445320:intergenic | 15.0% |
| !! | TTACAGATAAGAAAAAAATT+TGG | - | tig0031043:8012-8031 | Msa1445320:intergenic | 15.0% |
| !! | TGAAAAAGAAAAGAAGAAAA+GGG | - | tig0031043:6236-6255 | Msa1445320:intergenic | 20.0% |
| !! | ATGAAAAAGAAAAGAAGAAA+AGG | - | tig0031043:6237-6256 | Msa1445320:intergenic | 20.0% |
| !!! | GTTTAATTTAACATTGTTGT+TGG | + | tig0031043:6621-6640 | Msa1445320:intron | 20.0% |
| !!! | TTTAACTTTCCAAAATATGA+TGG | + | tig0031043:6684-6703 | Msa1445320:intron | 20.0% |
| !! | TAAAAAAAAGACATTGTACT+TGG | - | tig0031043:6926-6945 | Msa1445320:intergenic | 20.0% |
| !! | TTATGATTAACTTAGTCAAT+AGG | + | tig0031043:7053-7072 | Msa1445320:intron | 20.0% |
| !! | GCTGGATTAATTATAAATTT+AGG | + | tig0031043:7169-7188 | Msa1445320:intron | 20.0% |
| !! | CTTAAATAACACTCATAAAA+AGG | - | tig0031043:7208-7227 | Msa1445320:intergenic | 20.0% |
| !!! | AATCATTTTTCATGAAAAGT+GGG | - | tig0031043:7388-7407 | Msa1445320:intergenic | 20.0% |
| !!! | AAATCATTTTTCATGAAAAG+TGG | - | tig0031043:7389-7408 | Msa1445320:intergenic | 20.0% |
| !!! | TAACTTGATTTGAAAATCAA+CGG | + | tig0031043:7552-7571 | Msa1445320:intron | 20.0% |
| !!! | TTTTTTTCTGGCAATAAATT+GGG | - | tig0031043:8313-8332 | Msa1445320:intergenic | 20.0% |
| !!! | ATTTTTTTCTGGCAATAAAT+TGG | - | tig0031043:8314-8333 | Msa1445320:intergenic | 20.0% |
| !!! | CCATTATTTTCTTCTATTTT+TGG | - | tig0031043:10410-10429 | Msa1445320:intergenic | 20.0% |
| !! | CCAAAAATAGAAGAAAATAA+TGG | + | tig0031043:10407-10426 | Msa1445320:CDS | 20.0% |
| !!! | ATATTTTAATGTGTCTTAGA+TGG | + | tig0031043:10730-10749 | Msa1445320:three_prime_UTR | 20.0% |
| ! | GTGAAAAAAAGAAGAAGAAT+AGG | - | tig0031043:6050-6069 | Msa1053850:intergenic | 25.0% |
| ! | GAAAAAGAAAAGAAGAAAAG+GGG | - | tig0031043:6235-6254 | Msa1445320:intergenic | 25.0% |
| !! | TTTGTTCTTTTCATGTTAGA+GGG | + | tig0031043:6356-6375 | Msa1445320:intron | 25.0% |
| !! | TTTAGCAAACCATCATATTT+TGG | - | tig0031043:6696-6715 | Msa1445320:intergenic | 25.0% |
| !!! | GTGTTGATATTTTTTAGGTT+TGG | + | tig0031043:6720-6739 | Msa1445320:intron | 25.0% |
| !! | ATGACTTTACTTTATTTAGC+CGG | + | tig0031043:6957-6976 | Msa1445320:intron | 25.0% |
| !! | AACAAATTCAAAAGCTTTAG+AGG | - | tig0031043:7231-7250 | Msa1445320:intergenic | 25.0% |
| ! | ATTTAATGACTTTAGGCTTA+AGG | + | tig0031043:7267-7286 | Msa1445320:intron | 25.0% |
| ! | TTTAATGACTTTAGGCTTAA+GGG | + | tig0031043:7268-7287 | Msa1445320:intron | 25.0% |
| ! | CATTAGTTGTAACAATTTCT+TGG | - | tig0031043:7426-7445 | Msa1445320:intergenic | 25.0% |
| ! | CAAGAAATTGTTACAACTAA+TGG | + | tig0031043:7424-7443 | Msa1445320:intron | 25.0% |
| ! | TATTAAGGAAGCTGAAATTT+CGG | - | tig0031043:7677-7696 | Msa1445320:intergenic | 25.0% |
| ! | TTGAAATCGTACAAAAATCA+GGG | - | tig0031043:7812-7831 | Msa1445320:intergenic | 25.0% |
| ! | AAATGCATATTCAATGTTTG+TGG | - | tig0031043:7963-7982 | Msa1445320:intergenic | 25.0% |
| !! | CTTACACTTTGCATAATTTT+TGG | - | tig0031043:8121-8140 | Msa1445320:intergenic | 25.0% |
| !!! | CCAGCATAAATATTTTTTTC+TGG | - | tig0031043:8325-8344 | Msa1445320:intergenic | 25.0% |
| ! | CCAGAAAAAAATATTTATGC+TGG | + | tig0031043:8322-8341 | Msa1445320:CDS | 25.0% |
| ! | CAAGTTTAACCAAGTTATTA+CGG | - | tig0031043:9569-9588 | Msa1445320:intergenic | 25.0% |
| ! | TCACATTCTTCTATAAATTC+CGG | + | tig0031043:9684-9703 | Msa1445320:CDS | 25.0% |
| ! | TGCTTTGTGTAAATAAAGAA+AGG | - | tig0031043:9922-9941 | Msa1445320:intergenic | 25.0% |
| !! | TGATAACCTGATTTAAAGTT+GGG | - | tig0031043:10259-10278 | Msa1445320:intergenic | 25.0% |
| !! | TTGATAACCTGATTTAAAGT+TGG | - | tig0031043:10260-10279 | Msa1445320:intergenic | 25.0% |
| !!! | TCTTCTATTTTTGGTGATTT+CGG | - | tig0031043:10401-10420 | Msa1445320:intergenic | 25.0% |
| ! | ATAGAAGAAAATAATGGTTC+TGG | + | tig0031043:10413-10432 | Msa1445320:CDS | 25.0% |
| ! | TAGAGAATACTATGAAACTT+TGG | - | tig0031043:10759-10778 | Msa1445320:intergenic | 25.0% |
| ! | TGTTGTTTGTTAGAGAAAGA+AGG | - | tig0031043:6000-6019 | Msa1053850:intergenic | 30.0% |
| TAATGATGAAATGGAATGGA+AGG | - | tig0031043:6072-6091 | Msa1053850:intergenic | 30.0% | |
| AGGATAATGATGAAATGGAA+TGG | - | tig0031043:6076-6095 | Msa1053850:intergenic | 30.0% | |
| AGAAGAGGATAATGATGAAA+TGG | - | tig0031043:6081-6100 | Msa1053850:intergenic | 30.0% | |
| AGTCAACGAAAGAAAAGAAA+AGG | - | tig0031043:6139-6158 | Msa1445320:intergenic | 30.0% | |
| ! | TCTTGGTTTACATGCTTTTA+CGG | + | tig0031043:6280-6299 | Msa1445320:intron | 30.0% |
| ! | CTTTGTTCTTTTCATGTTAG+AGG | + | tig0031043:6355-6374 | Msa1445320:intron | 30.0% |
| GAAGAACAAACCAATTTCAA+TGG | + | tig0031043:6546-6565 | Msa1445320:CDS | 30.0% | |
| ATCATCTGAACCATTGAAAT+TGG | - | tig0031043:6559-6578 | Msa1445320:intergenic | 30.0% | |
| ATTGTAACTGTAAACTTACC+TGG | - | tig0031043:6594-6613 | Msa1445320:intergenic | 30.0% | |
| ! | CATTGTTGTTGGGAAATAAT+AGG | + | tig0031043:6632-6651 | Msa1445320:intron | 30.0% |
| !!! | TTTTTTAGGTTTGGTTGAGT+TGG | + | tig0031043:6729-6748 | Msa1445320:intron | 30.0% |
| !!! | TTTTTAGGTTTGGTTGAGTT+GGG | + | tig0031043:6730-6749 | Msa1445320:intron | 30.0% |
| ATTTAGTAGATCAGAAAGTG+AGG | + | tig0031043:6792-6811 | Msa1445320:CDS | 30.0% | |
| CAAGAACATAATTTGAACTC+AGG | + | tig0031043:6883-6902 | Msa1445320:CDS | 30.0% | |
| TTGTACTTGGAAGACATTAA+AGG | - | tig0031043:6913-6932 | Msa1445320:intergenic | 30.0% | |
| !! | TTTGGATTTTGACGAAATTG+TGG | + | tig0031043:6982-7001 | Msa1445320:intron | 30.0% |
| TATCCAAACATAGCATTACT+TGG | + | tig0031043:7101-7120 | Msa1445320:intron | 30.0% | |
| TTCCATTGCCTGTTAAAATA+TGG | + | tig0031043:7330-7349 | Msa1445320:intron | 30.0% | |
| !!! | AACCATATTTTAACAGGCAA+TGG | - | tig0031043:7335-7354 | Msa1445320:intergenic | 30.0% |
| ATTGCCTGTTAAAATATGGT+TGG | + | tig0031043:7334-7353 | Msa1445320:intron | 30.0% | |
| AAATTGTTACAACTAATGGC+TGG | + | tig0031043:7428-7447 | Msa1445320:intron | 30.0% | |
| ! | AGCTGAAATTTCGGAATTTT+CGG | - | tig0031043:7668-7687 | Msa1445320:intergenic | 30.0% |
| TCCTTAATACGCTATTAAAG+CGG | + | tig0031043:7688-7707 | Msa1445320:intron | 30.0% | |
| TTATCGAATTGCAGTTATAG+CGG | - | tig0031043:7789-7808 | Msa1445320:intergenic | 30.0% | |
| GTTGAAATCGTACAAAAATC+AGG | - | tig0031043:7813-7832 | Msa1445320:intergenic | 30.0% | |
| !!! | CAAAGTGTAAGTTTTGAAGT+GGG | + | tig0031043:8130-8149 | Msa1445320:CDS | 30.0% |
| !!! | AGTTTTGAAGTGGGAAATAT+AGG | + | tig0031043:8139-8158 | Msa1445320:CDS | 30.0% |
| AAATGTGACAGATTGTAGTT+TGG | + | tig0031043:8348-8367 | Msa1445320:CDS | 30.0% | |
| ! | GAAAAGGAGCTTAATTTGAA+AGG | + | tig0031043:8379-8398 | Msa1445320:CDS | 30.0% |
| AGGTAAAATCAGAAAAAGAC+AGG | + | tig0031043:8410-8429 | Msa1445320:CDS | 30.0% | |
| GGTAAAATCAGAAAAAGACA+GGG | + | tig0031043:8411-8430 | Msa1445320:CDS | 30.0% | |
| TTCTTGAGGAAATTCATACT+GGG | - | tig0031043:8593-8612 | Msa1445320:intergenic | 30.0% | |
| ! | AATAATTTTCCTGAAGAGCA+TGG | + | tig0031043:9018-9037 | Msa1445320:CDS | 30.0% |
| GAACTTTCATGAATTTCATC+AGG | - | tig0031043:9045-9064 | Msa1445320:intergenic | 30.0% | |
| TCAACCTGAAAGTAGTTTAA+TGG | + | tig0031043:9065-9084 | Msa1445320:CDS | 30.0% | |
| AGCAATCAAGTGAGTTATTT+AGG | + | tig0031043:9283-9302 | Msa1445320:CDS | 30.0% | |
| AATTGAATCATCTTCAACAG+CGG | - | tig0031043:9523-9542 | Msa1445320:intergenic | 30.0% | |
| CGTAATAACTTGGTTAAACT+TGG | + | tig0031043:9567-9586 | Msa1445320:CDS | 30.0% | |
| CACATTCTTCTATAAATTCC+GGG | + | tig0031043:9685-9704 | Msa1445320:CDS | 30.0% | |
| ACATTCTTCTATAAATTCCG+GGG | + | tig0031043:9686-9705 | Msa1445320:CDS | 30.0% | |
| TTATTGCTTTGATCATCAAC+CGG | - | tig0031043:9783-9802 | Msa1445320:intergenic | 30.0% | |
| ATAAAGAAAGGCAACAATGA+CGG | - | tig0031043:9910-9929 | Msa1445320:intergenic | 30.0% | |
| TCATCGAGATAACTGTTTAA+AGG | - | tig0031043:9983-10002 | Msa1445320:intergenic | 30.0% | |
| !! | ATTTGACTGTTGTGGTTTTA+CGG | - | tig0031043:10219-10238 | Msa1445320:intergenic | 30.0% |
| ACAACTGTTAACTCAATTCT+TGG | + | tig0031043:10440-10459 | Msa1445320:CDS | 30.0% | |
| ATATCCTGCAAATATCAAGA+GGG | + | tig0031043:10532-10551 | Msa1445320:CDS | 30.0% | |
| ! | AGTCATCTGTCATAGATTTT+AGG | + | tig0031043:10704-10723 | Msa1445320:three_prime_UTR | 30.0% |
| ATTCTCTATCGTTAACACTT+AGG | + | tig0031043:10771-10790 | Msa1445320:three_prime_UTR | 30.0% | |
| ! | TGTTTGTTAGAGAAAGAAGG+AGG | - | tig0031043:5997-6016 | Msa1053850:intergenic | 35.0% |
| !! | TTTGATCTTGGTGATGCATT+AGG | - | tig0031043:6177-6196 | Msa1445320:intergenic | 35.0% |
| !!! | TGTGAGTTTTGGTTTGATCT+TGG | - | tig0031043:6189-6208 | Msa1445320:intergenic | 35.0% |
| GAAGAAAAGGGGAAAGAAAA+AGG | - | tig0031043:6224-6243 | Msa1445320:intergenic | 35.0% | |
| TTTCATGTTAGAGGGTCAAA+AGG | + | tig0031043:6364-6383 | Msa1445320:intron | 35.0% | |
| TTCATGTTAGAGGGTCAAAA+GGG | + | tig0031043:6365-6384 | Msa1445320:intron | 35.0% | |
| !! | TTTTAAGGGAACGAGAATCA+TGG | + | tig0031043:6417-6436 | Msa1445320:intron | 35.0% |
| GTTTATGTGTGTCACAAATG+TGG | + | tig0031043:6441-6460 | Msa1445320:CDS | 35.0% | |
| AAGATCTGTGGAATCATTGA+AGG | + | tig0031043:6516-6535 | Msa1445320:CDS | 35.0% | |
| GATGATGATTACAAAACACC+AGG | + | tig0031043:6573-6592 | Msa1445320:CDS | 35.0% | |
| TTGGGTTCAAACAATGACAA+GGG | + | tig0031043:6748-6767 | Msa1445320:CDS | 35.0% | |
| AACAATGACAAGGGTAATGA+TGG | + | tig0031043:6757-6776 | Msa1445320:CDS | 35.0% | |
| ! | AGGGTAATGATGGAATTGAA+AGG | + | tig0031043:6767-6786 | Msa1445320:CDS | 35.0% |
| !!! | AGATGCTGTTGATGATTTTC+CGG | + | tig0031043:6822-6841 | Msa1445320:CDS | 35.0% |
| ! | TACTTTATTTAGCCGGTGTT+TGG | + | tig0031043:6964-6983 | Msa1445320:intron | 35.0% |
| TTTCGTCAAAATCCAAACAC+CGG | - | tig0031043:6979-6998 | Msa1445320:intergenic | 35.0% | |
| GAAATTGTGGTTACACTATG+CGG | + | tig0031043:6995-7014 | Msa1445320:intron | 35.0% | |
| TGACCAAGTAATGCTATGTT+TGG | - | tig0031043:7107-7126 | Msa1445320:intergenic | 35.0% | |
| TTGGTCATAACTCATACGTA+TGG | + | tig0031043:7120-7139 | Msa1445320:intron | 35.0% | |
| !! | CACAGTAGAAAATTTGTTGC+TGG | + | tig0031043:7151-7170 | Msa1445320:intron | 35.0% |
| ! | CATTTTTCATGAAAAGTGGG+AGG | - | tig0031043:7385-7404 | Msa1445320:intergenic | 35.0% |
| !!! | TTGATTTGGCTTTTCTCAAG+TGG | + | tig0031043:7496-7515 | Msa1445320:intron | 35.0% |
| ACAAAAATACATGCACTTGC+AGG | - | tig0031043:7607-7626 | Msa1445320:intergenic | 35.0% | |
| !! | GCAAGTGCATGTATTTTTGT+CGG | + | tig0031043:7607-7626 | Msa1445320:intron | 35.0% |
| TCCGCTTTAATAGCGTATTA+AGG | - | tig0031043:7692-7711 | Msa1445320:intergenic | 35.0% | |
| !!! | GGATTTTGAGGTTTCCAATA+TGG | - | tig0031043:7742-7761 | Msa1445320:intergenic | 35.0% |
| ! | AATCGGTATATCGGATTTTG+AGG | - | tig0031043:7754-7773 | Msa1445320:intergenic | 35.0% |
| TCAAAATCCGATATACCGAT+TGG | + | tig0031043:7753-7772 | Msa1445320:intron | 35.0% | |
| !!! | GCAAAGTGTAAGTTTTGAAG+TGG | + | tig0031043:8129-8148 | Msa1445320:CDS | 35.0% |
| ! | TTTGAAGTGGGAAATATAGG+TGG | + | tig0031043:8142-8161 | Msa1445320:CDS | 35.0% |
| TTGAAGTGGGAAATATAGGT+GGG | + | tig0031043:8143-8162 | Msa1445320:CDS | 35.0% | |
| !! | TCTGCAATTGAGCTTGTTAA+TGG | - | tig0031043:8202-8221 | Msa1445320:intergenic | 35.0% |
| !! | TAGTTTGGTGTGTGATGAAA+AGG | + | tig0031043:8363-8382 | Msa1445320:CDS | 35.0% |
| TAATTTGAAAGGAAGCGATG+AGG | + | tig0031043:8390-8409 | Msa1445320:CDS | 35.0% | |
| AAAAGACAGGGTTGAAATCA+TGG | + | tig0031043:8423-8442 | Msa1445320:CDS | 35.0% | |
| GTTGTAGGTGAAACATATGA+AGG | + | tig0031043:8460-8479 | Msa1445320:CDS | 35.0% | |
| TGTTAATCCGAAGGAAAAGA+AGG | + | tig0031043:8543-8562 | Msa1445320:CDS | 35.0% | |
| TCTTGAGGAAATTCATACTG+GGG | - | tig0031043:8592-8611 | Msa1445320:intergenic | 35.0% | |
| CTTCTTGAGGAAATTCATAC+TGG | - | tig0031043:8594-8613 | Msa1445320:intergenic | 35.0% | |
| TACTACTTGTAATGAAGTCG+AGG | + | tig0031043:8672-8691 | Msa1445320:CDS | 35.0% | |
| TCAAGTTTATCATCAAGCAC+AGG | - | tig0031043:8742-8761 | Msa1445320:intergenic | 35.0% | |
| !! | AGATTGCTCTGAAGTTTCTT+TGG | + | tig0031043:8924-8943 | Msa1445320:CDS | 35.0% |
| GAGACCATTAAACTACTTTC+AGG | - | tig0031043:9072-9091 | Msa1445320:intergenic | 35.0% | |
| TCTCAGCAAATGAATTTCAG+AGG | + | tig0031043:9088-9107 | Msa1445320:CDS | 35.0% | |
| CTCAGCAAATGAATTTCAGA+GGG | + | tig0031043:9089-9108 | Msa1445320:CDS | 35.0% | |
| ATAAACGATGCATCTGTAGT+TGG | + | tig0031043:9174-9193 | Msa1445320:CDS | 35.0% | |
| AAGTGACACTGAAGTTATAG+TGG | + | tig0031043:9221-9240 | Msa1445320:CDS | 35.0% | |
| ! | AGGAATAATAGTGATGATGC+TGG | + | tig0031043:9303-9322 | Msa1445320:CDS | 35.0% |
| GCTGTTGAAGATGATTCAAT+TGG | + | tig0031043:9522-9541 | Msa1445320:CDS | 35.0% | |
| TTGGTTAAACTTGGTTCATC+TGG | + | tig0031043:9576-9595 | Msa1445320:CDS | 35.0% | |
| AGAATGTGATGTATACTTGC+TGG | - | tig0031043:9673-9692 | Msa1445320:intergenic | 35.0% | |
| TCTGCTGTTGAAGATAATTC+AGG | + | tig0031043:9726-9745 | Msa1445320:CDS | 35.0% | |
| TTGACTAAATTAACTCCACC+CGG | + | tig0031043:9807-9826 | Msa1445320:CDS | 35.0% | |
| AACTGATGTTTCAGTTGACT+CGG | + | tig0031043:9830-9849 | Msa1445320:CDS | 35.0% | |
| TCAACCAATGTTGTGAAAGA+TGG | - | tig0031043:10155-10174 | Msa1445320:intergenic | 35.0% | |
| TTGGTTCCCAACTTTAAATC+AGG | + | tig0031043:10250-10269 | Msa1445320:CDS | 35.0% | |
| AAGAAAAGGCTGCAAATGAA+TGG | + | tig0031043:10495-10514 | Msa1445320:CDS | 35.0% | |
| ATATTTGCAGGATATCTTGC+TGG | - | tig0031043:10527-10546 | Msa1445320:intergenic | 35.0% | |
| GATATCCTGCAAATATCAAG+AGG | + | tig0031043:10531-10550 | Msa1445320:CDS | 35.0% | |
| ! | TTTTCCCTCTTGATATTTGC+AGG | - | tig0031043:10539-10558 | Msa1445320:intergenic | 35.0% |
| ! | AATTGAAGAGCAGACCATTT+TGG | + | tig0031043:10564-10583 | Msa1445320:CDS | 35.0% |
| CAAACCAACTGTATCCAAAA+TGG | - | tig0031043:10581-10600 | Msa1445320:intergenic | 35.0% | |
| TATTTGCTCTCCTGTTCTTA+TGG | + | tig0031043:10648-10667 | Msa1445320:three_prime_UTR | 35.0% | |
| TAACCAGAATCCATAAGAAC+AGG | - | tig0031043:10661-10680 | Msa1445320:intergenic | 35.0% | |
| ! | AGTAAGTTGAGAGTGGTAGT+GGG | - | tig0031043:5974-5993 | Msa1053850:intergenic | 40.0% |
| GGAAGAAGAAGAAGAAGAAG+AGG | - | tig0031043:6096-6115 | Msa1053850:intergenic | 40.0% | |
| TCCTCCTTTCTTTCTTTCGT+TGG | + | tig0031043:6113-6132 | Msa1445320:five_prime_UTR | 40.0% | |
| AAGGCCAACGAAAGAAAGAA+AGG | - | tig0031043:6120-6139 | Msa1445320:intergenic | 40.0% | |
| !! | GGAAAGAAAAAGGAAGTACC+TGG | - | tig0031043:6214-6233 | Msa1445320:intergenic | 40.0% |
| TGAGAAAACCCAGAAAGACA+AGG | - | tig0031043:6311-6330 | Msa1445320:intergenic | 40.0% | |
| ATGTGTGTCACAAATGTGGT+TGG | + | tig0031043:6445-6464 | Msa1445320:CDS | 40.0% | |
| GTTGGGTTCAAACAATGACA+AGG | + | tig0031043:6747-6766 | Msa1445320:CDS | 40.0% | |
| !!! | GTTGATGATTTTCCGGATAG+TGG | + | tig0031043:6829-6848 | Msa1445320:CDS | 40.0% |
| AACTCATACGTATGGACTTG+TGG | + | tig0031043:7128-7147 | Msa1445320:intron | 40.0% | |
| TTAGGCTTAAGGGAGAAGTT+TGG | + | tig0031043:7278-7297 | Msa1445320:intron | 40.0% | |
| GCCTGTTAAAATATGGTTGG+TGG | + | tig0031043:7337-7356 | Msa1445320:intron | 40.0% | |
| !!! | GCCACCAACCATATTTTAAC+AGG | - | tig0031043:7341-7360 | Msa1445320:intergenic | 40.0% |
| TTTCATGAAAAGTGGGAGGT+GGG | - | tig0031043:7381-7400 | Msa1445320:intergenic | 40.0% | |
| ! | TTTTCATGAAAAGTGGGAGG+TGG | - | tig0031043:7382-7401 | Msa1445320:intergenic | 40.0% |
| TCAAGTGGAAAATGCACCTT+AGG | + | tig0031043:7511-7530 | Msa1445320:intron | 40.0% | |
| CAAGTGGAAAATGCACCTTA+GGG | + | tig0031043:7512-7531 | Msa1445320:intron | 40.0% | |
| ACTACGCACTTTATACCCTA+AGG | - | tig0031043:7530-7549 | Msa1445320:intergenic | 40.0% | |
| !! | TTTGTCGGTGTTATCTACAG+CGG | + | tig0031043:7622-7641 | Msa1445320:intron | 40.0% |
| GTTTCCAATATGGTGAATGG+CGG | - | tig0031043:7732-7751 | Msa1445320:intergenic | 40.0% | |
| GAGGTTTCCAATATGGTGAA+TGG | - | tig0031043:7735-7754 | Msa1445320:intergenic | 40.0% | |
| TTGCTTGAGCTAGCAATAAG+TGG | - | tig0031043:8079-8098 | Msa1445320:intergenic | 40.0% | |
| TTCTGGCAATAAATTGGGCA+CGG | - | tig0031043:8308-8327 | Msa1445320:intergenic | 40.0% | |
| ! | GAGTCAACTGATAACGTTGT+AGG | + | tig0031043:8445-8464 | Msa1445320:CDS | 40.0% |
| AGTTAACGAAGCAATTTCCC+TGG | + | tig0031043:8498-8517 | Msa1445320:CDS | 40.0% | |
| AATTTCCCTGGATCATGACA+TGG | + | tig0031043:8510-8529 | Msa1445320:CDS | 40.0% | |
| ATTTCCCTGGATCATGACAT+GGG | + | tig0031043:8511-8530 | Msa1445320:CDS | 40.0% | |
| ATTGGCGAGTTTACTTCTTG+AGG | - | tig0031043:8607-8626 | Msa1445320:intergenic | 40.0% | |
| ! | ACATTCACGTCTTCCTTTTC+TGG | - | tig0031043:8703-8722 | Msa1445320:intergenic | 40.0% |
| TTATCATCAAGCACAGGAAG+TGG | - | tig0031043:8736-8755 | Msa1445320:intergenic | 40.0% | |
| ACATGAGGAACATGTTACTG+AGG | + | tig0031043:8792-8811 | Msa1445320:CDS | 40.0% | |
| AACCAGTTGAGTGAAAGAAG+TGG | + | tig0031043:8838-8857 | Msa1445320:CDS | 40.0% | |
| ! | TAACATGCATCTCTGAAGAG+AGG | - | tig0031043:8867-8886 | Msa1445320:intergenic | 40.0% |
| CTCTTCAGAGATGCATGTTA+TGG | + | tig0031043:8867-8886 | Msa1445320:CDS | 40.0% | |
| AGCAAATGAATTTCAGAGGG+AGG | + | tig0031043:9092-9111 | Msa1445320:CDS | 40.0% | |
| ! | AGTGATGATGCTGGTGAAAA+TGG | + | tig0031043:9312-9331 | Msa1445320:CDS | 40.0% |
| GAAGAGAATAAGAAACCGAC+TGG | + | tig0031043:9375-9394 | Msa1445320:CDS | 40.0% | |
| AGATCAACGCCGTAATAACT+TGG | + | tig0031043:9557-9576 | Msa1445320:CDS | 40.0% | |
| TCAACTGAAACATCAGTTCC+GGG | - | tig0031043:9828-9847 | Msa1445320:intergenic | 40.0% | |
| GTCAACTGAAACATCAGTTC+CGG | - | tig0031043:9829-9848 | Msa1445320:intergenic | 40.0% | |
| ! | ACTGATGTTTCAGTTGACTC+GGG | + | tig0031043:9831-9850 | Msa1445320:CDS | 40.0% |
| ATCAGTAACAGCTGGTACAT+CGG | - | tig0031043:10009-10028 | Msa1445320:intergenic | 40.0% | |
| GTGGAAACTTTACCATCAAC+CGG | + | tig0031043:10029-10048 | Msa1445320:CDS | 40.0% | |
| !! | TGGTTTTACGGTTTCAGAAG+TGG | - | tig0031043:10207-10226 | Msa1445320:intergenic | 40.0% |
| AGTCAAATTCCACCTCTAGT+TGG | + | tig0031043:10231-10250 | Msa1445320:CDS | 40.0% | |
| TAAAGTTGGGAACCAACTAG+AGG | - | tig0031043:10246-10265 | Msa1445320:intergenic | 40.0% | |
| !! | TCTGCTCTGGTTTGTTATCT+TGG | - | tig0031043:10321-10340 | Msa1445320:intergenic | 40.0% |
| ! | ACACCTCTCAAGAGTCTTTT+GGG | + | tig0031043:10353-10372 | Msa1445320:CDS | 40.0% |
| GACTCAAGTGGTGAAAGAAA+AGG | + | tig0031043:10481-10500 | Msa1445320:CDS | 40.0% | |
| ! | CAGACCATTTTGGATACAGT+TGG | + | tig0031043:10574-10593 | Msa1445320:CDS | 40.0% |
| TCTCCTGTTCTTATGGATTC+TGG | + | tig0031043:10655-10674 | Msa1445320:three_prime_UTR | 40.0% | |
| ! | GTAAGTTGAGAGTGGTAGTG+GGG | - | tig0031043:5973-5992 | Msa1053850:intergenic | 45.0% |
| ! | GAGTAAGTTGAGAGTGGTAG+TGG | - | tig0031043:5975-5994 | Msa1053850:intergenic | 45.0% |
| ! | AAGGAGGAGTAAGTTGAGAG+TGG | - | tig0031043:5981-6000 | Msa1053850:intergenic | 45.0% |
| GCCAACGAAAGAAAGAAAGG+AGG | - | tig0031043:6117-6136 | Msa1445320:intergenic | 45.0% | |
| CAAACCAAAACTCACACTCC+AGG | + | tig0031043:6193-6212 | Msa1445320:CDS | 45.0% | |
| ! | AGTACCTGGAGTGTGAGTTT+TGG | - | tig0031043:6200-6219 | Msa1445320:intergenic | 45.0% |
| ACGGAAAGTCCTTGTCTTTC+TGG | + | tig0031043:6299-6318 | Msa1445320:intron | 45.0% | |
| CGGAAAGTCCTTGTCTTTCT+GGG | + | tig0031043:6300-6319 | Msa1445320:intron | 45.0% | |
| CTGGGATGTGGATTTGGAAA+AGG | - | tig0031043:6471-6490 | Msa1445320:intergenic | 45.0% | |
| ! | TTAGCACTGGGATGTGGATT+TGG | - | tig0031043:6477-6496 | Msa1445320:intergenic | 45.0% |
| ! | CTATGTTTAGCACTGGGATG+TGG | - | tig0031043:6483-6502 | Msa1445320:intergenic | 45.0% |
| GCACGTCTATGTTTAGCACT+GGG | - | tig0031043:6489-6508 | Msa1445320:intergenic | 45.0% | |
| AGCACGTCTATGTTTAGCAC+TGG | - | tig0031043:6490-6509 | Msa1445320:intergenic | 45.0% | |
| CCTTGACTTAGTCCACTATC+CGG | - | tig0031043:6844-6863 | Msa1445320:intergenic | 45.0% | |
| TGTTTGGATACGCGATGTCT+TGG | - | tig0031043:7091-7110 | Msa1445320:intergenic | 45.0% | |
| TACGCTATTAAAGCGGAGTG+TGG | + | tig0031043:7695-7714 | Msa1445320:intron | 45.0% | |
| CTATTAAAGCGGAGTGTGGT+GGG | + | tig0031043:7699-7718 | Msa1445320:intron | 45.0% | |
| AGTGAGAGATGCACTTCAGA+GGG | - | tig0031043:7849-7868 | Msa1445320:intergenic | 45.0% | |
| AAGTGAGAGATGCACTTCAG+AGG | - | tig0031043:7850-7869 | Msa1445320:intergenic | 45.0% | |
| ! | GAAGAATCGAGCATTGTGCA+TGG | + | tig0031043:8232-8251 | Msa1445320:CDS | 45.0% |
| ATACTGGGGCAGCAAAGAAA+GGG | - | tig0031043:8578-8597 | Msa1445320:intergenic | 45.0% | |
| TGAGCCTCGTTCGTGATTAT+TGG | - | tig0031043:8625-8644 | Msa1445320:intergenic | 45.0% | |
| AATAATCACGAACGAGGCTC+AGG | + | tig0031043:8624-8643 | Msa1445320:CDS | 45.0% | |
| ! | AGTCGAGGTTTTGCCAGAAA+AGG | + | tig0031043:8687-8706 | Msa1445320:CDS | 45.0% |
| TGTTTCAATGACACGCTCTC+AGG | - | tig0031043:8775-8794 | Msa1445320:intergenic | 45.0% | |
| ! | GAGCGTGTCATTGAAACATG+AGG | + | tig0031043:8777-8796 | Msa1445320:CDS | 45.0% |
| CACCACTTCTTTCACTCAAC+TGG | - | tig0031043:8843-8862 | Msa1445320:intergenic | 45.0% | |
| CGATGCATCTGTAGTTGGAA+AGG | + | tig0031043:9179-9198 | Msa1445320:CDS | 45.0% | |
| TCTGTAGTTGGAAAGGTTGC+AGG | + | tig0031043:9186-9205 | Msa1445320:CDS | 45.0% | |
| GCTCAACTTCTGATTGCAAG+TGG | - | tig0031043:9266-9285 | Msa1445320:intergenic | 45.0% | |
| GGATGAACAGCTATCAGTGA+AGG | + | tig0031043:9425-9444 | Msa1445320:CDS | 45.0% | |
| TCATCTTCAACAGCGGAATC+CGG | - | tig0031043:9516-9535 | Msa1445320:intergenic | 45.0% | |
| !! | TTACGGCGTTGATCTTGAAC+AGG | - | tig0031043:9552-9571 | Msa1445320:intergenic | 45.0% |
| GGATGCACAACTGTTAGTGA+AGG | + | tig0031043:9632-9651 | Msa1445320:CDS | 45.0% | |
| ! | GTGATGTATACTTGCTGGCA+AGG | - | tig0031043:9668-9687 | Msa1445320:intergenic | 45.0% |
| AGTTACTGCTGTGCTAATGC+CGG | + | tig0031043:9761-9780 | Msa1445320:CDS | 45.0% | |
| TGACAGTTTGGAAGGCAACT+GGG | + | tig0031043:9863-9882 | Msa1445320:CDS | 45.0% | |
| TGTACCAGCTGTTACTGATG+TGG | + | tig0031043:10010-10029 | Msa1445320:CDS | 45.0% | |
| GTTTCCACATCAGTAACAGC+TGG | - | tig0031043:10017-10036 | Msa1445320:intergenic | 45.0% | |
| GCTGCCATCTTTCACAACAT+TGG | + | tig0031043:10148-10167 | Msa1445320:CDS | 45.0% | |
| GAGGTGGAATTTGACTGTTG+TGG | - | tig0031043:10227-10246 | Msa1445320:intergenic | 45.0% | |
| TGTGCTCTTTACTTCTGCTC+TGG | - | tig0031043:10334-10353 | Msa1445320:intergenic | 45.0% | |
| ! | CACACCTCTCAAGAGTCTTT+TGG | + | tig0031043:10352-10371 | Msa1445320:CDS | 45.0% |
| TCACCCAAAAGACTCTTGAG+AGG | - | tig0031043:10359-10378 | Msa1445320:intergenic | 45.0% | |
| !! | TCTCAAGAGTCTTTTGGGTG+AGG | + | tig0031043:10358-10377 | Msa1445320:CDS | 45.0% |
| !! | GTTGGTTTGTTGCACAACAG+TGG | + | tig0031043:10592-10611 | Msa1445320:CDS | 45.0% |
| ! | CTTTTCTTCTACCTTCGCTG+AGG | - | tig0031043:10620-10639 | Msa1445320:intergenic | 45.0% |
| !!! | TTTATAATTTTATATTGATT+TGG | + | tig0031043:7482-7501 | Msa1445320:intron | 5.0% |
| CGTGCTCACAAGAAGATCTG+TGG | + | tig0031043:6504-6523 | Msa1445320:CDS | 50.0% | |
| !! | CCGGATAGTGGACTAAGTCA+AGG | + | tig0031043:6841-6860 | Msa1445320:CDS | 50.0% |
| !! | TCGGTGTTATCTACAGCGGA+TGG | + | tig0031043:7626-7645 | Msa1445320:intron | 50.0% |
| GTGTTATCTACAGCGGATGG+CGG | + | tig0031043:7629-7648 | Msa1445320:intron | 50.0% | |
| GCTATTAAAGCGGAGTGTGG+TGG | + | tig0031043:7698-7717 | Msa1445320:intron | 50.0% | |
| CTGACCGCCATTCACCATAT+TGG | + | tig0031043:7725-7744 | Msa1445320:intron | 50.0% | |
| CATGGCGCCAATCGGTATAT+CGG | - | tig0031043:7763-7782 | Msa1445320:intergenic | 50.0% | |
| ! | TTGCAGTTATAGCGGTGCCA+TGG | - | tig0031043:7781-7800 | Msa1445320:intergenic | 50.0% |
| TCAATTGCCAGGCTCTACTG+TGG | + | tig0031043:8174-8193 | Msa1445320:CDS | 50.0% | |
| AATGGATCCACAGTAGAGCC+TGG | - | tig0031043:8184-8203 | Msa1445320:intergenic | 50.0% | |
| ! | GTGCATGGCGATGGTTTTTC+TGG | + | tig0031043:8247-8266 | Msa1445320:CDS | 50.0% |
| ATCGCCCATGTCATGATCCA+GGG | - | tig0031043:8518-8537 | Msa1445320:intergenic | 50.0% | |
| CGATGGAGCTGTTAATCCGA+AGG | + | tig0031043:8534-8553 | Msa1445320:CDS | 50.0% | |
| ! | CCGGGTTCCTTCTTTTCCTT+CGG | - | tig0031043:8553-8572 | Msa1445320:intergenic | 50.0% |
| CCGAAGGAAAAGAAGGAACC+CGG | + | tig0031043:8550-8569 | Msa1445320:CDS | 50.0% | |
| CGAAGGAAAAGAAGGAACCC+GGG | + | tig0031043:8551-8570 | Msa1445320:CDS | 50.0% | |
| CATACTGGGGCAGCAAAGAA+AGG | - | tig0031043:8579-8598 | Msa1445320:intergenic | 50.0% | |
| CTCGCCAATAATCACGAACG+AGG | + | tig0031043:8618-8637 | Msa1445320:CDS | 50.0% | |
| TCATCAGGTCCATGCTCTTC+AGG | - | tig0031043:9030-9049 | Msa1445320:intergenic | 50.0% | |
| !! | TTCAGAGGGAGGCATCCTTT+CGG | + | tig0031043:9103-9122 | Msa1445320:CDS | 50.0% |
| TTCATCAGTCGCAGACCGAA+AGG | - | tig0031043:9121-9140 | Msa1445320:intergenic | 50.0% | |
| AAAGGTTGCAGGAGCAGATG+TGG | + | tig0031043:9197-9216 | Msa1445320:CDS | 50.0% | |
| GATTGCAAGTGGTCACTACG+AGG | - | tig0031043:9255-9274 | Msa1445320:intergenic | 50.0% | |
| GAGTCAGCAGCAATACCAGT+CGG | - | tig0031043:9393-9412 | Msa1445320:intergenic | 50.0% | |
| TGCTGAGCTTTCTGCTGAAC+CGG | + | tig0031043:9494-9513 | Msa1445320:CDS | 50.0% | |
| !! | CTGCTGACTCACATGAAGCA+CGG | + | tig0031043:9610-9629 | Msa1445320:CDS | 50.0% |
| !! | TGCTGACTCACATGAAGCAC+GGG | + | tig0031043:9611-9630 | Msa1445320:CDS | 50.0% |
| ACTGAAACATCAGTTCCGGG+TGG | - | tig0031043:9825-9844 | Msa1445320:intergenic | 50.0% | |
| !! | TTTCAGTTGACTCGGGTAGC+CGG | + | tig0031043:9838-9857 | Msa1445320:CDS | 50.0% |
| GTGACAGTTTGGAAGGCAAC+TGG | + | tig0031043:9862-9881 | Msa1445320:CDS | 50.0% | |
| GACAGTTTGGAAGGCAACTG+GGG | + | tig0031043:9864-9883 | Msa1445320:CDS | 50.0% | |
| !! | TTTACCATCAACCGGTTCGC+TGG | + | tig0031043:10037-10056 | Msa1445320:CDS | 50.0% |
| GTTTCAGAAGTGGCGCCTTT+AGG | - | tig0031043:10197-10216 | Msa1445320:intergenic | 50.0% | |
| AGTTGGGAACCAACTAGAGG+TGG | - | tig0031043:10243-10262 | Msa1445320:intergenic | 50.0% | |
| !! | GGTGATTTCGGCTTGTTGCT+AGG | - | tig0031043:10389-10408 | Msa1445320:intergenic | 50.0% |
| TCACCACTTGAGTCGCTGAA+GGG | - | tig0031043:10475-10494 | Msa1445320:intergenic | 50.0% | |
| TTCACCACTTGAGTCGCTGA+AGG | - | tig0031043:10476-10495 | Msa1445320:intergenic | 50.0% | |
| CATGAAAAGTGGGAGGTGGG+AGG | - | tig0031043:7378-7397 | Msa1445320:intergenic | 55.0% | |
| CACTTGCAGGCGTGCAACTA+TGG | - | tig0031043:7594-7613 | Msa1445320:intergenic | 55.0% | |
| ! | CGATATACCGATTGGCGCCA+TGG | + | tig0031043:7761-7780 | Msa1445320:intron | 55.0% |
| GGGACGCAAAGTCAATTGCC+AGG | + | tig0031043:8163-8182 | Msa1445320:CDS | 55.0% | |
| ! | TCGAGCATTGTGCATGGCGA+TGG | + | tig0031043:8238-8257 | Msa1445320:CDS | 55.0% |
| CATCGCCCATGTCATGATCC+AGG | - | tig0031043:8519-8538 | Msa1445320:intergenic | 55.0% | |
| CTGGATCATGACATGGGCGA+TGG | + | tig0031043:8517-8536 | Msa1445320:CDS | 55.0% | |
| !! | TGCTGACTCGCACGAAGAAC+AGG | + | tig0031043:9404-9423 | Msa1445320:CDS | 55.0% |
| ATCATGTCGAGCAGAAGCCC+CGG | - | tig0031043:9706-9725 | Msa1445320:intergenic | 55.0% | |
| TGCCTTCCAAACTGTCACGC+CGG | - | tig0031043:9860-9879 | Msa1445320:intergenic | 55.0% | |
| TTGGAAGGCAACTGGGGTTC+TGG | + | tig0031043:9870-9889 | Msa1445320:CDS | 55.0% | |
| TTCTGTCGATGCCAGCGAAC+CGG | - | tig0031043:10051-10070 | Msa1445320:intergenic | 55.0% | |
| TCTCAGCAGGTGCAGCTTGT+CGG | - | tig0031043:10097-10116 | Msa1445320:intergenic | 55.0% | |
| ATTGGTTGAGCCTAGCCACG+TGG | + | tig0031043:10166-10185 | Msa1445320:CDS | 55.0% | |
| !! | TTAGGACTAGCCACGTGGCT+AGG | - | tig0031043:10179-10198 | Msa1445320:intergenic | 55.0% |
| ! | AGCCACGTGGCTAGTCCTAA+AGG | + | tig0031043:10179-10198 | Msa1445320:CDS | 55.0% |
| CACCACTTGAGTCGCTGAAG+GGG | - | tig0031043:10474-10493 | Msa1445320:intergenic | 55.0% | |
| CAACAGTGGATCCTCAGCGA+AGG | + | tig0031043:10606-10625 | Msa1445320:CDS | 55.0% | |
| GGCAGCAAAGAAAGGGACCC+GGG | - | tig0031043:8571-8590 | Msa1445320:intergenic | 60.0% | |
| GGGCAGCAAAGAAAGGGACC+CGG | - | tig0031043:8572-8591 | Msa1445320:intergenic | 60.0% | |
| AGCCGGCGTGACAGTTTGGA+AGG | + | tig0031043:9855-9874 | Msa1445320:CDS | 60.0% | |
| !! | GGCAACTGGGGTTCTGGTTC+AGG | + | tig0031043:9876-9895 | Msa1445320:CDS | 60.0% |
| GATGCCAGCGAACCGGTTGA+TGG | - | tig0031043:10044-10063 | Msa1445320:intergenic | 60.0% | |
| !! | TCGCTGGCATCGACAGAAGC+AGG | + | tig0031043:10053-10072 | Msa1445320:CDS | 60.0% |
| CCAGACAGCTGTCTCTCAGC+AGG | - | tig0031043:10110-10129 | Msa1445320:intergenic | 60.0% | |
| CCTGCTGAGAGACAGCTGTC+TGG | + | tig0031043:10107-10126 | Msa1445320:CDS | 60.0% | |
| !! | CGCCTTTAGGACTAGCCACG+TGG | - | tig0031043:10184-10203 | Msa1445320:intergenic | 60.0% |
| TGAGTCGCTGAAGGGGACTC+AGG | - | tig0031043:10467-10486 | Msa1445320:intergenic | 60.0% | |
| GTCCCCTTCAGCGACTCAAG+TGG | + | tig0031043:10469-10488 | Msa1445320:CDS | 60.0% | |
| ! | CTACAGCGGATGGCGGTCTG+TGG | + | tig0031043:7636-7655 | Msa1445320:intron | 65.0% |
| !! | AGCGGTGCCATGGCGCCAAT+CGG | - | tig0031043:7771-7790 | Msa1445320:intergenic | 65.0% |
| GGGTAGCCGGCGTGACAGTT+TGG | + | tig0031043:9851-9870 | Msa1445320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031043 | gene | 5951 | 10893 | 5951 | ID=Msa1445320;Name=Msa1445320 |
| tig0031043 | mRNA | 5951 | 10893 | 5951 | ID=Msa1445320-mRNA-1;Parent=Msa1445320;Name=Msa1445320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=227|1|1|1|1|1|5|262|950 |
| tig0031043 | exon | 5951 | 6214 | 5951 | ID=Msa1445320-mRNA-1:exon:14937;Parent=Msa1445320-mRNA-1 |
| tig0031043 | exon | 6424 | 6594 | 6424 | ID=Msa1445320-mRNA-1:exon:14938;Parent=Msa1445320-mRNA-1 |
| tig0031043 | exon | 6737 | 6904 | 6737 | ID=Msa1445320-mRNA-1:exon:14939;Parent=Msa1445320-mRNA-1 |
| tig0031043 | exon | 8062 | 9897 | 8062 | ID=Msa1445320-mRNA-1:exon:14940;Parent=Msa1445320-mRNA-1 |
| tig0031043 | exon | 9991 | 10893 | 9991 | ID=Msa1445320-mRNA-1:exon:14941;Parent=Msa1445320-mRNA-1 |
| tig0031043 | five_prime_UTR | 5951 | 6177 | 5951 | ID=Msa1445320-mRNA-1:five_prime_utr;Parent=Msa1445320-mRNA-1 |
| tig0031043 | CDS | 6178 | 6214 | 6178 | ID=Msa1445320-mRNA-1:cds;Parent=Msa1445320-mRNA-1 |
| tig0031043 | CDS | 6424 | 6594 | 6424 | ID=Msa1445320-mRNA-1:cds;Parent=Msa1445320-mRNA-1 |
| tig0031043 | CDS | 6737 | 6904 | 6737 | ID=Msa1445320-mRNA-1:cds;Parent=Msa1445320-mRNA-1 |
| tig0031043 | CDS | 8062 | 9897 | 8062 | ID=Msa1445320-mRNA-1:cds;Parent=Msa1445320-mRNA-1 |
| tig0031043 | CDS | 9991 | 10631 | 9991 | ID=Msa1445320-mRNA-1:cds;Parent=Msa1445320-mRNA-1 |
| tig0031043 | three_prime_UTR | 10632 | 10893 | 10632 | ID=Msa1445320-mRNA-1:three_prime_utr;Parent=Msa1445320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
