Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301980 | sp|F4JZL7|HIP33_ARATH | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.16e-41 | 161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301980 | A0A072UQS4 | 88.665 | 547 | 41 | 8 | 1 | 546 | 1 | 527 | 1.32e-143 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014770 | Msa1301980 | 0.809149 | 2.182146e-50 | -8.615850e-47 |
| Msa0687090 | Msa1301980 | 0.807562 | 4.757213e-50 | -8.615850e-47 |
| Msa0688380 | Msa1301980 | 0.806528 | 7.872332e-50 | -8.615850e-47 |
| Msa0689660 | Msa1301980 | 0.809220 | 2.107010e-50 | -8.615850e-47 |
| Msa0751250 | Msa1301980 | 0.803538 | 3.323188e-49 | -8.615850e-47 |
| Msa0831620 | Msa1301980 | 0.802051 | 6.740157e-49 | -8.615850e-47 |
| Msa0154620 | Msa1301980 | 0.804428 | 2.170532e-49 | -8.615850e-47 |
| Msa0187040 | Msa1301980 | 0.808584 | 2.883212e-50 | -8.615850e-47 |
| Msa1240940 | Msa1301980 | 0.804082 | 2.561676e-49 | -8.615850e-47 |
| Msa1245520 | Msa1301980 | 0.804217 | 2.401671e-49 | -8.615850e-47 |
| Msa1301980 | Msa1302000 | 0.859578 | 3.754793e-63 | -8.615850e-47 |
| Msa1301980 | Msa1303880 | 0.827742 | 1.322135e-54 | -8.615850e-47 |
| Msa1301980 | Msa1331650 | 0.802338 | 5.882791e-49 | -8.615850e-47 |
| Msa1301980 | Msa1333500 | 0.818462 | 1.936244e-52 | -8.615850e-47 |
| Msa1301980 | Msa1363010 | 0.818953 | 1.497854e-52 | -8.615850e-47 |
| Msa1301980 | Msa1408160 | 0.850080 | 2.140205e-60 | -8.615850e-47 |
| Msa1301980 | Msa1420830 | 0.809629 | 1.721702e-50 | -8.615850e-47 |
| Msa1301980 | Msa1426320 | 0.804183 | 2.441124e-49 | -8.615850e-47 |
| Msa1301980 | Msa1445320 | 0.810945 | 8.955553e-51 | -8.615850e-47 |
| Msa1301980 | Msa1448960 | 0.846382 | 2.250004e-59 | -8.615850e-47 |
| Msa0433630 | Msa1301980 | 0.821956 | 3.064902e-53 | -8.615850e-47 |
| Msa0477480 | Msa1301980 | 0.811007 | 8.683594e-51 | -8.615850e-47 |
| Msa1021560 | Msa1301980 | 0.802732 | 4.879799e-49 | -8.615850e-47 |
| Msa1050260 | Msa1301980 | 0.810488 | 1.124353e-50 | -8.615850e-47 |
| Msa0356640 | Msa1301980 | 0.803876 | 2.828073e-49 | -8.615850e-47 |
| Msa1138800 | Msa1301980 | 0.807017 | 6.206913e-50 | -8.615850e-47 |
| Msa1161970 | Msa1301980 | 0.807304 | 5.396411e-50 | -8.615850e-47 |
| Msa1212700 | Msa1301980 | 0.816706 | 4.816434e-52 | -8.615850e-47 |
| Msa1212920 | Msa1301980 | 0.817281 | 3.577597e-52 | -8.615850e-47 |
| Msa1216090 | Msa1301980 | 0.893407 | 6.467985e-75 | -8.615850e-47 |
| Msa1216340 | Msa1301980 | 0.852967 | 3.260778e-61 | -8.615850e-47 |
| Msa1219930 | Msa1301980 | 0.803917 | 2.773259e-49 | -8.615850e-47 |
| Msa0495620 | Msa1301980 | 0.810111 | 1.355659e-50 | -8.615850e-47 |
| Msa0521510 | Msa1301980 | 0.833808 | 4.310236e-56 | -8.615850e-47 |
| Msa0521530 | Msa1301980 | 0.825624 | 4.235415e-54 | -8.615850e-47 |
| Msa0552570 | Msa1301980 | 0.827023 | 1.966452e-54 | -8.615850e-47 |
| Msa0571350 | Msa1301980 | 0.814201 | 1.738284e-51 | -8.615850e-47 |
| Msa0572830 | Msa1301980 | 0.801654 | 8.131904e-49 | -8.615850e-47 |
| Msa0580940 | Msa1301980 | 0.849549 | 3.011771e-60 | -8.615850e-47 |
| Msa0945900 | Msa1301980 | 0.805821 | 1.109580e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301980 | MtrunA17_Chr4g0065651 | 78.623 | 552 | 72 | 9 | 1 | 546 | 1 | 512 | 2.31e-135 | 402 |
| Msa1301980 | MtrunA17_Chr0c22g0493881 | 79.404 | 403 | 44 | 6 | 1 | 401 | 1 | 366 | 6.35e-91 | 283 |
| Msa1301980 | MtrunA17_Chr4g0065621 | 89.524 | 315 | 19 | 4 | 1 | 314 | 1 | 302 | 7.42e-91 | 283 |
| Msa1301980 | MtrunA17_Chr2g0287751 | 65.251 | 259 | 64 | 10 | 1 | 255 | 1 | 237 | 9.85e-56 | 195 |
| Msa1301980 | MtrunA17_Chr4g0065611 | 92.481 | 133 | 8 | 1 | 414 | 546 | 12 | 142 | 2.51e-40 | 142 |
| Msa1301980 | MtrunA17_Chr0c22g0493871 | 92.424 | 132 | 8 | 1 | 415 | 546 | 1 | 130 | 6.81e-40 | 141 |
| Msa1301980 | MtrunA17_Chr2g0287741 | 58.247 | 194 | 55 | 7 | 10 | 200 | 15 | 185 | 8.30e-30 | 123 |
| Msa1301980 | MtrunA17_Chr1g0208301 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 1.01e-29 | 120 |
| Msa1301980 | MtrunA17_Chr4g0067291 | 50.000 | 114 | 41 | 3 | 7 | 120 | 71 | 168 | 2.35e-24 | 104 |
| Msa1301980 | MtrunA17_Chr7g0269081 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 2.89e-24 | 103 |
| Msa1301980 | MtrunA17_Chr3g0111541 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 4.63e-19 | 85.9 |
| Msa1301980 | MtrunA17_Chr1g0192131 | 57.333 | 75 | 31 | 1 | 4 | 77 | 9 | 83 | 7.24e-19 | 89.0 |
| Msa1301980 | MtrunA17_Chr7g0272571 | 53.521 | 71 | 33 | 0 | 9 | 79 | 32 | 102 | 1.43e-18 | 87.4 |
| Msa1301980 | MtrunA17_Chr2g0296001 | 60.294 | 68 | 27 | 0 | 7 | 74 | 70 | 137 | 4.84e-17 | 82.8 |
| Msa1301980 | MtrunA17_Chr1g0198341 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 1.67e-13 | 65.9 |
| Msa1301980 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 6.63e-13 | 66.6 |
| Msa1301980 | MtrunA17_Chr1g0160201 | 45.902 | 61 | 33 | 0 | 14 | 74 | 29 | 89 | 1.88e-12 | 65.1 |
| Msa1301980 | MtrunA17_Chr2g0285561 | 46.575 | 73 | 38 | 1 | 8 | 79 | 6 | 78 | 2.01e-12 | 68.2 |
| Msa1301980 | MtrunA17_Chr3g0124411 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 2.45e-12 | 65.1 |
| Msa1301980 | MtrunA17_Chr2g0325601 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 3.51e-12 | 64.3 |
| Msa1301980 | MtrunA17_Chr1g0189221 | 37.975 | 79 | 49 | 0 | 1 | 79 | 44 | 122 | 3.97e-12 | 65.1 |
| Msa1301980 | MtrunA17_Chr7g0251491 | 33.654 | 104 | 62 | 3 | 2 | 98 | 40 | 143 | 7.69e-12 | 63.9 |
| Msa1301980 | MtrunA17_Chr4g0028461 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 1.04e-11 | 66.2 |
| Msa1301980 | MtrunA17_Chr7g0218981 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 1.39e-11 | 62.0 |
| Msa1301980 | MtrunA17_Chr5g0407821 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 1.78e-11 | 62.4 |
| Msa1301980 | MtrunA17_Chr5g0404641 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 5.29e-11 | 61.2 |
| Msa1301980 | MtrunA17_Chr4g0050571 | 45.455 | 66 | 35 | 1 | 10 | 75 | 101 | 165 | 9.92e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301980 | AT5G19090.2 | 78.000 | 100 | 22 | 0 | 1 | 100 | 1 | 100 | 1.89e-43 | 161 |
| Msa1301980 | AT5G19090.3 | 78.000 | 100 | 22 | 0 | 1 | 100 | 1 | 100 | 1.89e-43 | 161 |
| Msa1301980 | AT5G19090.5 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.18e-42 | 161 |
| Msa1301980 | AT5G19090.4 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.18e-42 | 161 |
| Msa1301980 | AT5G19090.1 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.18e-42 | 161 |
| Msa1301980 | AT5G27690.1 | 52.475 | 101 | 43 | 1 | 5 | 105 | 25 | 120 | 3.00e-26 | 110 |
| Msa1301980 | AT3G05220.1 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 3.21e-26 | 113 |
| Msa1301980 | AT1G23000.1 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 1.26e-25 | 108 |
| Msa1301980 | AT1G23000.2 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 3.57e-25 | 108 |
| Msa1301980 | AT5G37860.1 | 50.000 | 76 | 38 | 0 | 1 | 76 | 1 | 76 | 2.50e-19 | 88.6 |
| Msa1301980 | AT1G56210.1 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.38e-18 | 88.2 |
| Msa1301980 | AT1G06330.1 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 2.61e-13 | 68.2 |
| Msa1301980 | AT4G10465.1 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 3.90e-12 | 65.5 |
| Msa1301980 | AT1G66240.1 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 5.24e-12 | 63.2 |
| Msa1301980 | AT3G56891.1 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.69e-11 | 63.2 |
| Msa1301980 | AT3G02960.1 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 2.60e-11 | 64.3 |
| Msa1301980 | AT4G23882.1 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.08e-11 | 64.3 |
| Msa1301980 | AT3G56240.3 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 5.07e-11 | 60.8 |
| Msa1301980 | AT3G56240.1 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 5.07e-11 | 60.8 |
| Msa1301980 | AT1G71050.1 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.58e-11 | 61.2 |
Find 194 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8_3:-64267165 | Msa1301980:CDS |
| GCAGCAGCAGCAACAGTTAA+TGG | 0.165875 | 8_3:-64265870 | Msa1301980:CDS |
| CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8_3:-64266814 | Msa1301980:CDS |
| TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8_3:+64266761 | None:intergenic |
| ACTTGTGATAAATAAAGATT+TGG | 0.258061 | 8_3:+64267623 | None:intergenic |
| GGATTACCCGACATCATTTC+CGG | 0.260282 | 8_3:+64265932 | None:intergenic |
| AAGAAGCAAGTTTGAGAGTT+AGG | 0.269593 | 8_3:+64267788 | None:intergenic |
| TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8_3:+64266947 | None:intergenic |
| CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8_3:+64266755 | None:intergenic |
| TTGTATTTGTTGACCACCTT+TGG | 0.297173 | 8_3:+64266918 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8_3:-64267120 | Msa1301980:CDS |
| TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8_3:+64266742 | None:intergenic |
| AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8_3:+64267132 | None:intergenic |
| GGAGAGAGAATGAGAAATAA+AGG | 0.309923 | 8_3:+64267994 | None:intergenic |
| GTTACAAACTTTATTCCTAT+TGG | 0.314373 | 8_3:-64267602 | Msa1301980:five_prime_UTR |
| CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8_3:+64266580 | None:intergenic |
| CTTCTTTACTCATGACCAAT+AGG | 0.330043 | 8_3:+64267587 | None:intergenic |
| TAGTAGTCATTGAGAGAGAA+TGG | 0.336882 | 8_3:+64267832 | None:intergenic |
| GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8_3:+64266754 | None:intergenic |
| TCTGATTCGGGTTCTGGCCC+GGG | 0.343572 | 8_3:+64266767 | None:intergenic |
| ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8_3:+64267043 | None:intergenic |
| GGTGATTATAGATCTGAAAA+TGG | 0.348415 | 8_3:+64267661 | None:intergenic |
| TTCTGATTCGGGTTCTGGCC+CGG | 0.355308 | 8_3:+64266766 | None:intergenic |
| CCACCATTGCAGCACGTTGT+TGG | 0.355462 | 8_3:+64265831 | None:intergenic |
| ATGATGGGCGGCGGCGGAGG+TGG | 0.357592 | 8_3:-64266097 | Msa1301980:CDS |
| AATGGCGGTGGTGGCGGAAA+CGG | 0.358961 | 8_3:-64266493 | Msa1301980:CDS |
| GTGGCCACCGGCGTCATTCT+CGG | 0.359701 | 8_3:-64267921 | Msa1301980:five_prime_UTR |
| AAGAAAGGTGGCGGCGGTGG+TGG | 0.361940 | 8_3:-64266325 | Msa1301980:CDS |
| TTCTATAAACTACTCCTCTA+TGG | 0.368659 | 8_3:+64265491 | None:intergenic |
| TAGAATGAAATGAGAATAGA+AGG | 0.368945 | 8_3:+64267724 | None:intergenic |
| CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8_3:+64266709 | None:intergenic |
| TTCAAATTCATGGCATGAAT+GGG | 0.375304 | 8_3:-64266366 | Msa1301980:CDS |
| ATGGCGGTGGTGGCGGAAAC+GGG | 0.382069 | 8_3:-64266492 | Msa1301980:CDS |
| AAGGAAAAGAGAGAAATAAA+TGG | 0.382972 | 8_3:+64267743 | None:intergenic |
| TAAGGATCTGGAGGAGGATA+AGG | 0.389057 | 8_3:+64265731 | None:intergenic |
| AGAGTTAGGAAGAGAGAGAA+TGG | 0.398540 | 8_3:+64267802 | None:intergenic |
| CATCAAACAAACAATGTTCA+TGG | 0.400654 | 8_3:-64265657 | Msa1301980:three_prime_UTR |
| AAAATGATGGGCGGCGGCGG+AGG | 0.402766 | 8_3:-64266100 | Msa1301980:CDS |
| GGTAACATTTCTGCTGTTCA+AGG | 0.405632 | 8_3:-64266001 | Msa1301980:CDS |
| CAGAAATGTTACCACCCATT+TGG | 0.407941 | 8_3:+64266011 | None:intergenic |
| TTCTCTCTCACTAACACACT+TGG | 0.409730 | 8_3:-64267882 | Msa1301980:five_prime_UTR |
| GCAATAATCAAAATAACAAT+GGG | 0.412169 | 8_3:-64266195 | Msa1301980:CDS |
| GGAAAGAAAGGTGGCGGCGG+TGG | 0.412415 | 8_3:-64266328 | Msa1301980:CDS |
| TGTATTTGTTGACCACCTTT+GGG | 0.413549 | 8_3:+64266919 | None:intergenic |
| TGATGTTGTTGTTGTTGATA+AGG | 0.414303 | 8_3:+64265911 | None:intergenic |
| CAGGGAAACATGCTGAGTTA+TGG | 0.418710 | 8_3:-64267101 | Msa1301980:CDS |
| AAAGGTGGCGGCGGTGGTGG+AGG | 0.419490 | 8_3:-64266322 | Msa1301980:CDS |
| GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8_3:+64267133 | None:intergenic |
| CCTGTGCCAGTTCAAATTCA+TGG | 0.427491 | 8_3:-64266376 | Msa1301980:CDS |
| AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8_3:-64267357 | Msa1301980:intron |
| TTTCAAGGTGGTGGTGGTCC+AGG | 0.433093 | 8_3:-64265956 | Msa1301980:CDS |
| AGTAGTCATTGAGAGAGAAT+GGG | 0.436778 | 8_3:+64267833 | None:intergenic |
| GGAAAGAAAGGTGGTGGTGG+TGG | 0.438004 | 8_3:-64266400 | Msa1301980:CDS |
| GATTACCCGACATCATTTCC+GGG | 0.438202 | 8_3:+64265933 | None:intergenic |
| ACGCCGGTGGCCACCGTCGC+CGG | 0.451894 | 8_3:+64267930 | None:intergenic |
| CTTGTGATAAATAAAGATTT+GGG | 0.452079 | 8_3:+64267624 | None:intergenic |
| GTTCAAATTCATGGCATGAA+TGG | 0.453332 | 8_3:-64266367 | Msa1301980:CDS |
| TAATACCACTGAGATCTTAC+CGG | 0.456960 | 8_3:-64267949 | Msa1301980:five_prime_UTR |
| AAAGCATGGCTGTAAGGATC+TGG | 0.457940 | 8_3:+64265719 | None:intergenic |
| CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8_3:-64266580 | Msa1301980:CDS |
| TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8_3:-64266632 | Msa1301980:CDS |
| AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8_3:-64266840 | Msa1301980:CDS |
| TTCATGCCATGAGTTTGAAC+CGG | 0.463492 | 8_3:+64266442 | None:intergenic |
| ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8_3:-64266527 | Msa1301980:CDS |
| TTCATGCCATGAATTTGAAC+TGG | 0.469656 | 8_3:+64266370 | None:intergenic |
| GCTGTTCAAGGCCTACCGGC+TGG | 0.474751 | 8_3:-64265989 | Msa1301980:CDS |
| CATGGCATGAATGGTGGAAA+TGG | 0.475119 | 8_3:-64266430 | Msa1301980:CDS |
| TTCTGCTGTTCAAGGCCTAC+CGG | 0.475565 | 8_3:-64265993 | Msa1301980:CDS |
| ATTGACAATGGCAAAGGTGG+TGG | 0.482824 | 8_3:-64267006 | Msa1301980:CDS |
| AGAATGAGAAATAAAGGAAA+GGG | 0.483580 | 8_3:+64268000 | None:intergenic |
| GGCGGAAACGGGCAGAAACC+TGG | 0.484298 | 8_3:-64266481 | Msa1301980:CDS |
| TGGTTCATTCGCATACTCAT+TGG | 0.484892 | 8_3:+64266031 | None:intergenic |
| CACCCTGCTATGAGTGGTGC+AGG | 0.485466 | 8_3:-64266067 | Msa1301980:CDS |
| AAATAAAGGAAAGGGAAGAA+AGG | 0.486470 | 8_3:+64268008 | None:intergenic |
| TCACTGAAAGCATGGCTGTA+AGG | 0.487097 | 8_3:+64265713 | None:intergenic |
| AAGGATCTGGAGGAGGATAA+GGG | 0.490431 | 8_3:+64265732 | None:intergenic |
| AGGTGGTGGTGGTCCAGGCC+CGG | 0.500129 | 8_3:-64265951 | Msa1301980:CDS |
| TTACCACCACTACCAGCAAT+TGG | 0.502799 | 8_3:+64266151 | None:intergenic |
| GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8_3:+64265785 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8_3:+64265737 | None:intergenic |
| GGTATGTCGATACCAATTGC+TGG | 0.507057 | 8_3:-64266163 | Msa1301980:CDS |
| AGCAATAATCAAAATAACAA+TGG | 0.513280 | 8_3:-64266196 | Msa1301980:CDS |
| TTACCTGCACCACTCATAGC+AGG | 0.515328 | 8_3:+64266064 | None:intergenic |
| AATGGTAATGGAGGAAAGAA+AGG | 0.520568 | 8_3:-64266340 | Msa1301980:CDS |
| CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8_3:-64266748 | Msa1301980:CDS |
| AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8_3:-64266955 | Msa1301980:CDS |
| GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8_3:-64266403 | Msa1301980:CDS |
| CCAACAACGTGCTGCAATGG+TGG | 0.523359 | 8_3:-64265831 | Msa1301980:CDS |
| GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8_3:-64266559 | Msa1301980:CDS |
| CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8_3:-64266841 | Msa1301980:CDS |
| GCTGGCGGAGGATACTTTCA+AGG | 0.526671 | 8_3:-64265971 | Msa1301980:CDS |
| CAAGGCCTACCGGCTGGCGG+AGG | 0.527853 | 8_3:-64265983 | Msa1301980:CDS |
| AACGGGCAGAAACCTGGTGG+TGG | 0.531908 | 8_3:-64266475 | Msa1301980:CDS |
| GTTCAAACTCATGGCATGAA+TGG | 0.532746 | 8_3:-64266439 | Msa1301980:CDS |
| AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8_3:-64266412 | Msa1301980:CDS |
| GAGAATGAGAAATAAAGGAA+AGG | 0.536809 | 8_3:+64267999 | None:intergenic |
| CCATGAGTTTGAACCGGCAC+AGG | 0.537218 | 8_3:+64266448 | None:intergenic |
| GAGTATGCGAATGAACCAAA+TGG | 0.538895 | 8_3:-64266026 | Msa1301980:CDS |
| CCATGAATTTGAACTGGCAC+AGG | 0.538960 | 8_3:+64266376 | None:intergenic |
| TTACCGGCGACGGTGGCCAC+CGG | 0.539537 | 8_3:-64267933 | Msa1301980:five_prime_UTR |
| GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8_3:-64266558 | Msa1301980:CDS |
| GGATACTTTCAAGGTGGTGG+TGG | 0.542661 | 8_3:-64265962 | Msa1301980:CDS |
| CCAGGCCCGGAAATGATGTC+GGG | 0.544393 | 8_3:-64265938 | Msa1301980:CDS |
| TGAAAGTATCCTCCGCCAGC+CGG | 0.545772 | 8_3:+64265974 | None:intergenic |
| GAATCACATGACATTGCAGC+TGG | 0.546046 | 8_3:+64265679 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.549476 | 8_3:+64265740 | None:intergenic |
| GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8_3:-64266472 | Msa1301980:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8_3:-64267119 | Msa1301980:CDS |
| GGAGGATACTTTCAAGGTGG+TGG | 0.554853 | 8_3:-64265965 | Msa1301980:CDS |
| TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8_3:-64266461 | Msa1301980:CDS |
| GGTGGTGGAGAAAACAAGAA+TGG | 0.556447 | 8_3:-64266232 | Msa1301980:CDS |
| GATGCCGCTGAATCAGCACC+CGG | 0.559535 | 8_3:-64266785 | Msa1301980:CDS |
| GTAGTCATTGAGAGAGAATG+GGG | 0.559844 | 8_3:+64267834 | None:intergenic |
| CCTGTGCCGGTTCAAACTCA+TGG | 0.563500 | 8_3:-64266448 | Msa1301980:CDS |
| TATATTGCATAAAATTAGAG+AGG | 0.567583 | 8_3:+64265604 | None:intergenic |
| TGAAGTTGTTGCTGCTGCTG+AGG | 0.567794 | 8_3:+64266880 | None:intergenic |
| ATGTAATTCACAGCAGGAGG+TGG | 0.568435 | 8_3:+64265767 | None:intergenic |
| CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8_3:+64266581 | None:intergenic |
| AATAATCAGAATCACGGTGG+AGG | 0.574664 | 8_3:-64266298 | Msa1301980:CDS |
| CAAACTCATGGCATGAATGG+TGG | 0.576301 | 8_3:-64266436 | Msa1301980:CDS |
| TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8_3:+64266923 | None:intergenic |
| GGGTACATGTAATTCACAGC+AGG | 0.576931 | 8_3:+64265761 | None:intergenic |
| GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8_3:+64266463 | None:intergenic |
| AATGTTCAAGCTATGAACAA+TGG | 0.581859 | 8_3:-64266130 | Msa1301980:CDS |
| GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8_3:-64266628 | Msa1301980:CDS |
| TCCAGGCCCGGAAATGATGT+CGG | 0.582559 | 8_3:-64265939 | Msa1301980:CDS |
| TCTCTCTCACTAACACACTT+GGG | 0.583240 | 8_3:-64267881 | Msa1301980:five_prime_UTR |
| GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8_3:-64267157 | Msa1301980:CDS |
| GGAGGAAAGAAAGGTGGCGG+CGG | 0.585808 | 8_3:-64266331 | Msa1301980:CDS |
| AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8_3:-64265790 | Msa1301980:CDS |
| TCGATACCAATTGCTGGTAG+TGG | 0.586867 | 8_3:-64266157 | Msa1301980:CDS |
| ACAAACAATGTTCATGGTGA+TGG | 0.588045 | 8_3:-64265651 | Msa1301980:three_prime_UTR |
| ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8_3:-64266424 | Msa1301980:CDS |
| AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8_3:-64267164 | Msa1301980:CDS |
| AAATCAGAATCAAAACCAGA+AGG | 0.592384 | 8_3:-64266962 | Msa1301980:CDS |
| GTTCAAGGCCTACCGGCTGG+CGG | 0.593786 | 8_3:-64265986 | Msa1301980:CDS |
| TGGCCCGGGTGCTGATTCAG+CGG | 0.593907 | 8_3:+64266781 | None:intergenic |
| AGTATCCTCCGCCAGCCGGT+AGG | 0.594256 | 8_3:+64265978 | None:intergenic |
| CATCCTCACCCTGCTATGAG+TGG | 0.595605 | 8_3:-64266073 | Msa1301980:CDS |
| TGGCTGTAAGGATCTGGAGG+AGG | 0.596052 | 8_3:+64265725 | None:intergenic |
| ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8_3:-64266719 | Msa1301980:CDS |
| TCAAATTCATGGCATGAATG+GGG | 0.600577 | 8_3:-64266365 | Msa1301980:CDS |
| GAACCAACAACGTGCTGCAA+TGG | 0.602574 | 8_3:-64265834 | Msa1301980:CDS |
| GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8_3:-64266409 | Msa1301980:CDS |
| AATCAGAATCAAAACCAGAA+GGG | 0.603694 | 8_3:-64266961 | Msa1301980:CDS |
| AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8_3:-64266931 | Msa1301980:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8_3:-64266406 | Msa1301980:CDS |
| ATACCAATTGCTGGTAGTGG+TGG | 0.608621 | 8_3:-64266154 | Msa1301980:CDS |
| CAAATTGACAATGGCAAAGG+TGG | 0.610618 | 8_3:-64267009 | Msa1301980:CDS |
| AGTATGCGAATGAACCAAAT+GGG | 0.610690 | 8_3:-64266025 | Msa1301980:CDS |
| TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8_3:+64266529 | None:intergenic |
| ATGCAAATTGACAATGGCAA+AGG | 0.611165 | 8_3:-64267012 | Msa1301980:CDS |
| CAAATTCATGGCATGAATGG+GGG | 0.612639 | 8_3:-64266364 | Msa1301980:CDS |
| CACTGAGATCTTACCGGCGA+CGG | 0.616024 | 8_3:-64267943 | Msa1301980:five_prime_UTR |
| AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8_3:-64267399 | Msa1301980:CDS |
| ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8_3:+64266571 | None:intergenic |
| GGGGTTTCTAATTACCATAG+AGG | 0.620908 | 8_3:-64265505 | Msa1301980:three_prime_UTR |
| ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8_3:-64267183 | Msa1301980:CDS |
| AAGAACATGCAAATTGACAA+TGG | 0.628311 | 8_3:-64267018 | Msa1301980:CDS |
| GAGGAGGATAAGGGTAAGGA+GGG | 0.628873 | 8_3:+64265741 | None:intergenic |
| GCACCACTCATAGCAGGGTG+AGG | 0.629783 | 8_3:+64266070 | None:intergenic |
| GGTCAACAAATACAAATACA+AGG | 0.629935 | 8_3:-64266910 | Msa1301980:CDS |
| AATGGAGGAAAGAAAGGTGG+CGG | 0.631313 | 8_3:-64266334 | Msa1301980:CDS |
| ATGCCGCTGAATCAGCACCC+GGG | 0.631365 | 8_3:-64266784 | Msa1301980:CDS |
| GCATGGCTGTAAGGATCTGG+AGG | 0.631436 | 8_3:+64265722 | None:intergenic |
| TGAGATCTTACCGGCGACGG+TGG | 0.634936 | 8_3:-64267940 | Msa1301980:five_prime_UTR |
| CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8_3:-64266523 | Msa1301980:CDS |
| GGAGGAAATAATCAGAATCA+CGG | 0.638839 | 8_3:-64266304 | Msa1301980:CDS |
| GGTGGAGAAAACAAGAATGG+AGG | 0.639076 | 8_3:-64266229 | Msa1301980:CDS |
| AATAATCAAAATAACAATGG+GGG | 0.641757 | 8_3:-64266193 | Msa1301980:CDS |
| GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8_3:-64267178 | Msa1301980:CDS |
| CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8_3:-64266526 | Msa1301980:CDS |
| ATATTGCATAAAATTAGAGA+GGG | 0.648642 | 8_3:+64265605 | None:intergenic |
| TACATGTAATTCACAGCAGG+AGG | 0.650237 | 8_3:+64265764 | None:intergenic |
| GGTAATGGAGGAAAGAAAGG+TGG | 0.651222 | 8_3:-64266337 | Msa1301980:CDS |
| AGAGAGACCGAGAATGACGC+CGG | 0.658961 | 8_3:+64267914 | None:intergenic |
| TACCTGCACCACTCATAGCA+GGG | 0.659944 | 8_3:+64266065 | None:intergenic |
| GAGTGGTGCAGGTAATAATG+TGG | 0.661904 | 8_3:-64266056 | Msa1301980:CDS |
| CAGAATCAAAACCAGAAGGG+TGG | 0.662734 | 8_3:-64266958 | Msa1301980:CDS |
| TGCATAAAATTAGAGAGGGT+AGG | 0.663015 | 8_3:+64265609 | None:intergenic |
| AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8_3:-64266421 | Msa1301980:CDS |
| CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8_3:-64267182 | Msa1301980:CDS |
| CAATAATCAAAATAACAATG+GGG | 0.668955 | 8_3:-64266194 | Msa1301980:CDS |
| ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8_3:+64266582 | None:intergenic |
| GAGACCGAGAATGACGCCGG+TGG | 0.677480 | 8_3:+64267917 | None:intergenic |
| AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8_3:-64266994 | Msa1301980:CDS |
| GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8_3:-64266934 | Msa1301980:CDS |
| ATGCGAATGAACCAAATGGG+TGG | 0.690349 | 8_3:-64266022 | Msa1301980:CDS |
| GGAAACGGGCAGAAACCTGG+TGG | 0.691525 | 8_3:-64266478 | Msa1301980:CDS |
| TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8_3:+64266583 | None:intergenic |
| AGTGGTGCAGGTAATAATGT+GGG | 0.701968 | 8_3:-64266055 | Msa1301980:CDS |
| GGCGGAGGATACTTTCAAGG+TGG | 0.717626 | 8_3:-64265968 | Msa1301980:CDS |
| GGAAATAATCAGAATCACGG+TGG | 0.727521 | 8_3:-64266301 | Msa1301980:CDS |
| CGTCGCCGGTAAGATCTCAG+TGG | 0.738206 | 8_3:+64267944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTGATTATTGTT+TGG | + | chr8_3:64266375-64266394 | None:intergenic | 10.0% |
| !! | ATAATTGAAAGCTATAATTA+AGG | + | chr8_3:64266144-64266163 | None:intergenic | 15.0% |
| !! | TAAAAAATTCATGTTTCATT+GGG | + | chr8_3:64267865-64267884 | None:intergenic | 15.0% |
| !! | CTTGTGATAAATAAAGATTT+GGG | + | chr8_3:64265817-64265836 | None:intergenic | 20.0% |
| !! | ACTTGTGATAAATAAAGATT+TGG | + | chr8_3:64265818-64265837 | None:intergenic | 20.0% |
| !! | CAAAAAAAGATAAAGAAACA+TGG | + | chr8_3:64265912-64265931 | None:intergenic | 20.0% |
| !! | TCTGCATACAAAAAAAAATA+AGG | + | chr8_3:64266008-64266027 | None:intergenic | 20.0% |
| !! | AAAATCTTACAGAAAATTGA+TGG | - | chr8_3:64266081-64266100 | Msa1301980:CDS | 20.0% |
| !! | AACATTTACTCTCAAAATTA+AGG | + | chr8_3:64266190-64266209 | None:intergenic | 20.0% |
| !!! | TTTTGATTATTGTTTGGTTT+GGG | + | chr8_3:64266369-64266388 | None:intergenic | 20.0% |
| !!! | ATTTTGATTATTGTTTGGTT+TGG | + | chr8_3:64266370-64266389 | None:intergenic | 20.0% |
| !! | AGCAATAATCAAAATAACAA+TGG | - | chr8_3:64267242-64267261 | Msa1301980:intron | 20.0% |
| !! | GCAATAATCAAAATAACAAT+GGG | - | chr8_3:64267243-64267262 | Msa1301980:intron | 20.0% |
| !! | CAATAATCAAAATAACAATG+GGG | - | chr8_3:64267244-64267263 | Msa1301980:intron | 20.0% |
| !! | AATAATCAAAATAACAATGG+GGG | - | chr8_3:64267245-64267264 | Msa1301980:intron | 20.0% |
| !!! | AATGGATTTCAAAAAATGAT+GGG | - | chr8_3:64267326-64267345 | Msa1301980:intron | 20.0% |
| !! | ATATTGCATAAAATTAGAGA+GGG | + | chr8_3:64267836-64267855 | None:intergenic | 20.0% |
| !! | TATATTGCATAAAATTAGAG+AGG | + | chr8_3:64267837-64267856 | None:intergenic | 20.0% |
| !! | CTAAAAAATTCATGTTTCAT+TGG | + | chr8_3:64267866-64267885 | None:intergenic | 20.0% |
| !!! | ACTATGTTTATTTTGTTCTT+TGG | - | chr8_3:64267987-64268006 | Msa1301980:five_prime_UTR | 20.0% |
| ! | AGAATGAGAAATAAAGGAAA+GGG | + | chr8_3:64265441-64265460 | None:intergenic | 25.0% |
| ! | AAGGAAAAGAGAGAAATAAA+TGG | + | chr8_3:64265698-64265717 | None:intergenic | 25.0% |
| ! | TAGAATGAAATGAGAATAGA+AGG | + | chr8_3:64265717-64265736 | None:intergenic | 25.0% |
| !!! | TATTTTATGTTCTTGTTTGG+TGG | + | chr8_3:64265755-64265774 | None:intergenic | 25.0% |
| !! | GAGTATTTTATGTTCTTGTT+TGG | + | chr8_3:64265758-64265777 | None:intergenic | 25.0% |
| ! | GTTACAAACTTTATTCCTAT+TGG | - | chr8_3:64265836-64265855 | Msa1301980:CDS | 25.0% |
| !!! | AGAAGAATTTTTGAAGATAC+AGG | - | chr8_3:64265869-64265888 | Msa1301980:CDS | 25.0% |
| !! | TCAAAATTAAGGTTCTGTTT+TGG | + | chr8_3:64266179-64266198 | None:intergenic | 25.0% |
| !!! | TGATTTTAGTGATGATGAAA+TGG | - | chr8_3:64266743-64266762 | Msa1301980:CDS | 25.0% |
| !! | CAATGGATTTCAAAAAATGA+TGG | - | chr8_3:64267325-64267344 | Msa1301980:intron | 25.0% |
| GAGAATGAGAAATAAAGGAA+AGG | + | chr8_3:64265442-64265461 | None:intergenic | 30.0% | |
| !!! | TTGTTTGGTGGAGTTTTATT+TGG | + | chr8_3:64265743-64265762 | None:intergenic | 30.0% |
| GGTGATTATAGATCTGAAAA+TGG | + | chr8_3:64265780-64265799 | None:intergenic | 30.0% | |
| ATTTGGGCTATAGAGAAAAA+TGG | + | chr8_3:64265801-64265820 | None:intergenic | 30.0% | |
| !! | TGTGTTGATTAATGAATGAC+AGG | - | chr8_3:64266222-64266241 | Msa1301980:CDS | 30.0% |
| AAGAACATGCAAATTGACAA+TGG | - | chr8_3:64266420-64266439 | Msa1301980:CDS | 30.0% | |
| AAATCAGAATCAAAACCAGA+AGG | - | chr8_3:64266476-64266495 | Msa1301980:CDS | 30.0% | |
| AATCAGAATCAAAACCAGAA+GGG | - | chr8_3:64266477-64266496 | Msa1301980:CDS | 30.0% | |
| GGTCAACAAATACAAATACA+AGG | - | chr8_3:64266528-64266547 | Msa1301980:CDS | 30.0% | |
| AACAACTTCAACAGATGAAA+GGG | - | chr8_3:64266598-64266617 | Msa1301980:CDS | 30.0% | |
| ! | CAAGATCTAGCTCAATTTAA+AGG | - | chr8_3:64266624-64266643 | Msa1301980:CDS | 30.0% |
| TTAACACCTTTAGCATCTTT+AGG | + | chr8_3:64266699-64266718 | None:intergenic | 30.0% | |
| !! | TGATGAGTTTGATGATGAAA+TGG | - | chr8_3:64266806-64266825 | Msa1301980:CDS | 30.0% |
| TTCAAATTCATGGCATGAAT+GGG | - | chr8_3:64267072-64267091 | Msa1301980:CDS | 30.0% | |
| AAATAACAATGGGGGTAAAA+AGG | - | chr8_3:64267253-64267272 | Msa1301980:intron | 30.0% | |
| AATAACAATGGGGGTAAAAA+GGG | - | chr8_3:64267254-64267273 | Msa1301980:intron | 30.0% | |
| AATGTTCAAGCTATGAACAA+TGG | - | chr8_3:64267308-64267327 | Msa1301980:intron | 30.0% | |
| ! | TGATGTTGTTGTTGTTGATA+AGG | + | chr8_3:64267530-64267549 | None:intergenic | 30.0% |
| CATCAAACAAACAATGTTCA+TGG | - | chr8_3:64267781-64267800 | Msa1301980:five_prime_UTR | 30.0% | |
| TTCTATAAACTACTCCTCTA+TGG | + | chr8_3:64267950-64267969 | None:intergenic | 30.0% | |
| GGAGAGAGAATGAGAAATAA+AGG | + | chr8_3:64265447-64265466 | None:intergenic | 35.0% | |
| TAATACCACTGAGATCTTAC+CGG | - | chr8_3:64265489-64265508 | Msa1301980:three_prime_UTR | 35.0% | |
| AGTAGTCATTGAGAGAGAAT+GGG | + | chr8_3:64265608-64265627 | None:intergenic | 35.0% | |
| TAGTAGTCATTGAGAGAGAA+TGG | + | chr8_3:64265609-64265628 | None:intergenic | 35.0% | |
| AAGAAGCAAGTTTGAGAGTT+AGG | + | chr8_3:64265653-64265672 | None:intergenic | 35.0% | |
| CTTCTTTACTCATGACCAAT+AGG | + | chr8_3:64265854-64265873 | None:intergenic | 35.0% | |
| AAAGTGAACATACACTGTGA+TGG | - | chr8_3:64266039-64266058 | Msa1301980:CDS | 35.0% | |
| GCTTCTTGATGAGAACATTT+GGG | + | chr8_3:64266308-64266327 | None:intergenic | 35.0% | |
| AGCTTCTTGATGAGAACATT+TGG | + | chr8_3:64266309-64266328 | None:intergenic | 35.0% | |
| ATCAAGAAGCTTGCAAAATC+AGG | - | chr8_3:64266318-64266337 | Msa1301980:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | - | chr8_3:64266319-64266338 | Msa1301980:CDS | 35.0% | |
| ACTGATTAACAACGTTGTTC+TGG | + | chr8_3:64266398-64266417 | None:intergenic | 35.0% | |
| ATGCAAATTGACAATGGCAA+AGG | - | chr8_3:64266426-64266445 | Msa1301980:CDS | 35.0% | |
| ! | TGTATTTGTTGACCACCTTT+GGG | + | chr8_3:64266522-64266541 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGACCACCTT+TGG | + | chr8_3:64266523-64266542 | None:intergenic | 35.0% |
| CAACAACTTCAACAGATGAA+AGG | - | chr8_3:64266597-64266616 | Msa1301980:CDS | 35.0% | |
| !! | CATCTTTAGGATTCTGATTC+GGG | + | chr8_3:64266686-64266705 | None:intergenic | 35.0% |
| !! | GCATCTTTAGGATTCTGATT+CGG | + | chr8_3:64266687-64266706 | None:intergenic | 35.0% |
| CAGAATCCTAAAGATGCTAA+AGG | - | chr8_3:64266690-64266709 | Msa1301980:CDS | 35.0% | |
| CTAAAATCATCCTCATCTTC+AGG | + | chr8_3:64266732-64266751 | None:intergenic | 35.0% | |
| !! | GAGTTTGATGATGAAATGGT+TGG | - | chr8_3:64266810-64266829 | Msa1301980:CDS | 35.0% |
| ! | ATGAAGGGTGGCAATTTTAA+TGG | - | chr8_3:64266927-64266946 | Msa1301980:CDS | 35.0% |
| TTCATGCCATGAATTTGAAC+TGG | + | chr8_3:64267071-64267090 | None:intergenic | 35.0% | |
| GTTCAAATTCATGGCATGAA+TGG | - | chr8_3:64267071-64267090 | Msa1301980:CDS | 35.0% | |
| TCAAATTCATGGCATGAATG+GGG | - | chr8_3:64267073-64267092 | Msa1301980:CDS | 35.0% | |
| !! | AATGGTAATGGAGGAAAGAA+AGG | - | chr8_3:64267098-64267117 | Msa1301980:CDS | 35.0% |
| GGAGGAAATAATCAGAATCA+CGG | - | chr8_3:64267134-64267153 | Msa1301980:CDS | 35.0% | |
| ! | GGATTTCAAAAAATGATGGG+CGG | - | chr8_3:64267329-64267348 | Msa1301980:intron | 35.0% |
| AGTATGCGAATGAACCAAAT+GGG | - | chr8_3:64267413-64267432 | Msa1301980:CDS | 35.0% | |
| ! | TGTTTTCATCACTGAAAGCA+TGG | + | chr8_3:64267736-64267755 | None:intergenic | 35.0% |
| ACAAACAATGTTCATGGTGA+TGG | - | chr8_3:64267787-64267806 | Msa1301980:five_prime_UTR | 35.0% | |
| TGCATAAAATTAGAGAGGGT+AGG | + | chr8_3:64267832-64267851 | None:intergenic | 35.0% | |
| ! | TTGATCCCCTTTTCATCTAT+AGG | - | chr8_3:64267911-64267930 | Msa1301980:five_prime_UTR | 35.0% |
| ! | TGATCCCCTTTTCATCTATA+GGG | - | chr8_3:64267912-64267931 | Msa1301980:five_prime_UTR | 35.0% |
| AAACCCCCTATAGATGAAAA+GGG | + | chr8_3:64267920-64267939 | None:intergenic | 35.0% | |
| TTCTCTCTCACTAACACACT+TGG | - | chr8_3:64265556-64265575 | Msa1301980:three_prime_UTR | 40.0% | |
| TCTCTCTCACTAACACACTT+GGG | - | chr8_3:64265557-64265576 | Msa1301980:three_prime_UTR | 40.0% | |
| GTAGTCATTGAGAGAGAATG+GGG | + | chr8_3:64265607-64265626 | None:intergenic | 40.0% | |
| AGAGTTAGGAAGAGAGAGAA+TGG | + | chr8_3:64265639-64265658 | None:intergenic | 40.0% | |
| ! | AAGAAACATGGAGAGTGTGA+TGG | + | chr8_3:64265900-64265919 | None:intergenic | 40.0% |
| ACTGAGATAGATGCAGAACA+AGG | - | chr8_3:64266255-64266274 | Msa1301980:CDS | 40.0% | |
| CTGAGATAGATGCAGAACAA+GGG | - | chr8_3:64266256-64266275 | Msa1301980:CDS | 40.0% | |
| CAAATTGACAATGGCAAAGG+TGG | - | chr8_3:64266429-64266448 | Msa1301980:CDS | 40.0% | |
| !! | AAAGGTGGTGGAAACAACAA+AGG | - | chr8_3:64266444-64266463 | Msa1301980:CDS | 40.0% |
| GGAAACAATAACCAACCCAA+AGG | - | chr8_3:64266504-64266523 | Msa1301980:CDS | 40.0% | |
| AACAATAACCAACCCAAAGG+TGG | - | chr8_3:64266507-64266526 | Msa1301980:CDS | 40.0% | |
| ATTTGATGTGCCTGAAGATG+AGG | - | chr8_3:64266719-64266738 | Msa1301980:CDS | 40.0% | |
| GAAGGGGGTTTCATCTTATT+AGG | + | chr8_3:64266843-64266862 | None:intergenic | 40.0% | |
| GTGCTCACATGATGTTGAAT+GGG | - | chr8_3:64266880-64266899 | Msa1301980:CDS | 40.0% | |
| TTCATAGCACTCATAAGCTG+TGG | + | chr8_3:64266912-64266931 | None:intergenic | 40.0% | |
| ACAGCTTATGAGTGCTATGA+AGG | - | chr8_3:64266911-64266930 | Msa1301980:CDS | 40.0% | |
| CAGCTTATGAGTGCTATGAA+GGG | - | chr8_3:64266912-64266931 | Msa1301980:CDS | 40.0% | |
| !! | AAGGGTGGCAATTTTAATGG+CGG | - | chr8_3:64266930-64266949 | Msa1301980:CDS | 40.0% |
| TTCATGCCATGAGTTTGAAC+CGG | + | chr8_3:64266999-64267018 | None:intergenic | 40.0% | |
| GTTCAAACTCATGGCATGAA+TGG | - | chr8_3:64266999-64267018 | Msa1301980:CDS | 40.0% | |
| ! | ATGAATGGTGGAAATGGCAA+TGG | - | chr8_3:64267014-64267033 | Msa1301980:CDS | 40.0% |
| AATGGCAATGGAGGAAAGAA+AGG | - | chr8_3:64267026-64267045 | Msa1301980:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+GGG | - | chr8_3:64267074-64267093 | Msa1301980:CDS | 40.0% | |
| ATGAATGGGGGAAATGGTAA+TGG | - | chr8_3:64267086-64267105 | Msa1301980:CDS | 40.0% | |
| GGAAATAATCAGAATCACGG+TGG | - | chr8_3:64267137-64267156 | Msa1301980:CDS | 40.0% | |
| AATAATCAGAATCACGGTGG+AGG | - | chr8_3:64267140-64267159 | Msa1301980:CDS | 40.0% | |
| ! | CAAAAATAGCGGTGGTTTTC+CGG | - | chr8_3:64267166-64267185 | Msa1301980:CDS | 40.0% |
| !! | TTTCAAAAAATGATGGGCGG+CGG | - | chr8_3:64267332-64267351 | Msa1301980:intron | 40.0% |
| AGTGGTGCAGGTAATAATGT+GGG | - | chr8_3:64267383-64267402 | Msa1301980:CDS | 40.0% | |
| TGGTTCATTCGCATACTCAT+TGG | + | chr8_3:64267410-64267429 | None:intergenic | 40.0% | |
| GAGTATGCGAATGAACCAAA+TGG | - | chr8_3:64267412-64267431 | Msa1301980:CDS | 40.0% | |
| CAGAAATGTTACCACCCATT+TGG | + | chr8_3:64267430-64267449 | None:intergenic | 40.0% | |
| GGTAACATTTCTGCTGTTCA+AGG | - | chr8_3:64267437-64267456 | Msa1301980:intron | 40.0% | |
| TACATGTAATTCACAGCAGG+AGG | + | chr8_3:64267677-64267696 | None:intergenic | 40.0% | |
| ! | GATCCCCTTTTCATCTATAG+GGG | - | chr8_3:64267913-64267932 | Msa1301980:five_prime_UTR | 40.0% |
| ! | ATCCCCTTTTCATCTATAGG+GGG | - | chr8_3:64267914-64267933 | Msa1301980:five_prime_UTR | 40.0% |
| AACCCCCTATAGATGAAAAG+GGG | + | chr8_3:64267919-64267938 | None:intergenic | 40.0% | |
| GAAACCCCCTATAGATGAAA+AGG | + | chr8_3:64267921-64267940 | None:intergenic | 40.0% | |
| GGGGTTTCTAATTACCATAG+AGG | - | chr8_3:64267933-64267952 | Msa1301980:five_prime_UTR | 40.0% | |
| GATAGATGCAGAACAAGGGA+AGG | - | chr8_3:64266260-64266279 | Msa1301980:CDS | 45.0% | |
| AAGGGAAGGTCACAGTTTCA+GGG | - | chr8_3:64266274-64266293 | Msa1301980:CDS | 45.0% | |
| CAGGGAAACATGCTGAGTTA+TGG | - | chr8_3:64266337-64266356 | Msa1301980:CDS | 45.0% | |
| ATTGACAATGGCAAAGGTGG+TGG | - | chr8_3:64266432-64266451 | Msa1301980:CDS | 45.0% | |
| CAGAATCAAAACCAGAAGGG+TGG | - | chr8_3:64266480-64266499 | Msa1301980:CDS | 45.0% | |
| AATCAAAACCAGAAGGGTGG+TGG | - | chr8_3:64266483-64266502 | Msa1301980:CDS | 45.0% | |
| TATTGTTTCCACCACCCTTC+TGG | + | chr8_3:64266494-64266513 | None:intergenic | 45.0% | |
| TTTGTTGACCACCTTTGGGT+TGG | + | chr8_3:64266518-64266537 | None:intergenic | 45.0% | |
| !! | TAGGATTCTGATTCGGGTTC+TGG | + | chr8_3:64266680-64266699 | None:intergenic | 45.0% |
| GGGGGTTTCATCTTATTAGG+TGG | + | chr8_3:64266840-64266859 | None:intergenic | 45.0% | |
| AAACCCCCTTCTATGCCTAT+GGG | - | chr8_3:64266852-64266871 | Msa1301980:CDS | 45.0% | |
| ATTCCCCATAGGCATAGAAG+GGG | + | chr8_3:64266859-64266878 | None:intergenic | 45.0% | |
| CATTCCCCATAGGCATAGAA+GGG | + | chr8_3:64266860-64266879 | None:intergenic | 45.0% | |
| GGTGCTCACATGATGTTGAA+TGG | - | chr8_3:64266879-64266898 | Msa1301980:CDS | 45.0% | |
| CTTATGAGTGCTATGAAGGG+TGG | - | chr8_3:64266915-64266934 | Msa1301980:CDS | 45.0% | |
| !! | AATTTTAATGGCGGTGGTGG+CGG | - | chr8_3:64266939-64266958 | Msa1301980:CDS | 45.0% |
| CAAACTCATGGCATGAATGG+TGG | - | chr8_3:64267002-64267021 | Msa1301980:CDS | 45.0% | |
| ! | CATGGCATGAATGGTGGAAA+TGG | - | chr8_3:64267008-64267027 | Msa1301980:CDS | 45.0% |
| ! | AATGGTGGAAATGGCAATGG+AGG | - | chr8_3:64267017-64267036 | Msa1301980:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr8_3:64267032-64267051 | Msa1301980:CDS | 45.0% | |
| CCATGAATTTGAACTGGCAC+AGG | + | chr8_3:64267065-64267084 | None:intergenic | 45.0% | |
| CCTGTGCCAGTTCAAATTCA+TGG | - | chr8_3:64267062-64267081 | Msa1301980:CDS | 45.0% | |
| !! | AATGGGGGAAATGGTAATGG+AGG | - | chr8_3:64267089-64267108 | Msa1301980:CDS | 45.0% |
| !! | GGTAATGGAGGAAAGAAAGG+TGG | - | chr8_3:64267101-64267120 | Msa1301980:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+CGG | - | chr8_3:64267032-64267051 | Msa1301980:CDS | 45.0% | |
| GGTGGAGGCAACAAAAATAG+CGG | - | chr8_3:64267155-64267174 | Msa1301980:CDS | 45.0% | |
| ! | GGTTTTCCGGAGGCTAAAAA+TGG | - | chr8_3:64267179-64267198 | Msa1301980:CDS | 45.0% |
| TTTCCGGAGGCTAAAAATGG+TGG | - | chr8_3:64267182-64267201 | Msa1301980:CDS | 45.0% | |
| !! | GGTGGTGGAGAAAACAAGAA+TGG | - | chr8_3:64267206-64267225 | Msa1301980:intron | 45.0% |
| GGTGGAGAAAACAAGAATGG+AGG | - | chr8_3:64267209-64267228 | Msa1301980:intron | 45.0% | |
| GGTATGTCGATACCAATTGC+TGG | - | chr8_3:64267275-64267294 | Msa1301980:intron | 45.0% | |
| TCGATACCAATTGCTGGTAG+TGG | - | chr8_3:64267281-64267300 | Msa1301980:intron | 45.0% | |
| !! | ATACCAATTGCTGGTAGTGG+TGG | - | chr8_3:64267284-64267303 | Msa1301980:intron | 45.0% |
| TTACCACCACTACCAGCAAT+TGG | + | chr8_3:64267290-64267309 | None:intergenic | 45.0% | |
| GAGTGGTGCAGGTAATAATG+TGG | - | chr8_3:64267382-64267401 | Msa1301980:CDS | 45.0% | |
| ATGCGAATGAACCAAATGGG+TGG | - | chr8_3:64267416-64267435 | Msa1301980:intron | 45.0% | |
| GATTACCCGACATCATTTCC+GGG | + | chr8_3:64267508-64267527 | None:intergenic | 45.0% | |
| GGATTACCCGACATCATTTC+CGG | + | chr8_3:64267509-64267528 | None:intergenic | 45.0% | |
| AGCAGCCAATGATGTATGCA+AGG | - | chr8_3:64267648-64267667 | Msa1301980:five_prime_UTR | 45.0% | |
| ATGTAATTCACAGCAGGAGG+TGG | + | chr8_3:64267674-64267693 | None:intergenic | 45.0% | |
| GGGTACATGTAATTCACAGC+AGG | + | chr8_3:64267680-64267699 | None:intergenic | 45.0% | |
| AAGGATCTGGAGGAGGATAA+GGG | + | chr8_3:64267709-64267728 | None:intergenic | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | + | chr8_3:64267710-64267729 | None:intergenic | 45.0% | |
| AAAGCATGGCTGTAAGGATC+TGG | + | chr8_3:64267722-64267741 | None:intergenic | 45.0% | |
| ! | TCACTGAAAGCATGGCTGTA+AGG | + | chr8_3:64267728-64267747 | None:intergenic | 45.0% |
| GAATCACATGACATTGCAGC+TGG | + | chr8_3:64267762-64267781 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGTTGCAG+AGG | + | chr8_3:64265468-64265487 | None:intergenic | 50.0% | |
| CAAGGGAAGGTCACAGTTTC+AGG | - | chr8_3:64266273-64266292 | Msa1301980:CDS | 50.0% | |
| GGTCACAGTTTCAGGGAATG+TGG | - | chr8_3:64266281-64266300 | Msa1301980:CDS | 50.0% | |
| TGAAGTTGTTGCTGCTGCTG+AGG | + | chr8_3:64266561-64266580 | None:intergenic | 50.0% | |
| GAAACCCCCTTCTATGCCTA+TGG | - | chr8_3:64266851-64266870 | Msa1301980:CDS | 50.0% | |
| AACCCCCTTCTATGCCTATG+GGG | - | chr8_3:64266853-64266872 | Msa1301980:CDS | 50.0% | |
| TTCCCCATAGGCATAGAAGG+GGG | + | chr8_3:64266858-64266877 | None:intergenic | 50.0% | |
| CCATTCCCCATAGGCATAGA+AGG | + | chr8_3:64266861-64266880 | None:intergenic | 50.0% | |
| CCTTCTATGCCTATGGGGAA+TGG | - | chr8_3:64266858-64266877 | Msa1301980:CDS | 50.0% | |
| ATGTGAGCACCATTCCCCAT+AGG | + | chr8_3:64266870-64266889 | None:intergenic | 50.0% | |
| !! | GGTGGCAATTTTAATGGCGG+TGG | - | chr8_3:64266933-64266952 | Msa1301980:CDS | 50.0% |
| !! | GGCAATTTTAATGGCGGTGG+TGG | - | chr8_3:64266936-64266955 | Msa1301980:CDS | 50.0% |
| GGCAATGGAGGAAAGAAAGG+TGG | - | chr8_3:64267029-64267048 | Msa1301980:CDS | 50.0% | |
| CATGGCATGAATGGGGGAAA+TGG | - | chr8_3:64267080-64267099 | Msa1301980:CDS | 50.0% | |
| GGAGGCAACAAAAATAGCGG+TGG | - | chr8_3:64267158-64267177 | Msa1301980:CDS | 50.0% | |
| ! | AAATAGCGGTGGTTTTCCGG+AGG | - | chr8_3:64267169-64267188 | Msa1301980:CDS | 50.0% |
| !!! | CCACCACCATTTTTAGCCTC+CGG | + | chr8_3:64267188-64267207 | None:intergenic | 50.0% |
| !! | GAGGCTAAAAATGGTGGTGG+TGG | - | chr8_3:64267188-64267207 | Msa1301980:CDS | 50.0% |
| !! | GCTAAAAATGGTGGTGGTGG+TGG | - | chr8_3:64267191-64267210 | Msa1301980:CDS | 50.0% |
| TACCTGCACCACTCATAGCA+GGG | + | chr8_3:64267376-64267395 | None:intergenic | 50.0% | |
| TTACCTGCACCACTCATAGC+AGG | + | chr8_3:64267377-64267396 | None:intergenic | 50.0% | |
| TTCTGCTGTTCAAGGCCTAC+CGG | - | chr8_3:64267445-64267464 | Msa1301980:intron | 50.0% | |
| GGAGGATACTTTCAAGGTGG+TGG | - | chr8_3:64267473-64267492 | Msa1301980:intron | 50.0% | |
| ! | GGATACTTTCAAGGTGGTGG+TGG | - | chr8_3:64267476-64267495 | Msa1301980:intron | 50.0% |
| GCAGCAGCAGCAACAGTTAA+TGG | - | chr8_3:64267568-64267587 | Msa1301980:intron | 50.0% | |
| GAACCAACAACGTGCTGCAA+TGG | - | chr8_3:64267604-64267623 | Msa1301980:five_prime_UTR | 50.0% | |
| ! | GGTGGCCTTGCATACATCAT+TGG | + | chr8_3:64267656-64267675 | None:intergenic | 50.0% |
| GAGGAGGATAAGGGTAAGGA+GGG | + | chr8_3:64267700-64267719 | None:intergenic | 50.0% | |
| TCTGGAGGAGGATAAGGGTA+AGG | + | chr8_3:64267704-64267723 | None:intergenic | 50.0% | |
| CACTGAGATCTTACCGGCGA+CGG | - | chr8_3:64265495-64265514 | Msa1301980:three_prime_UTR | 55.0% | |
| AGAGAGACCGAGAATGACGC+CGG | + | chr8_3:64265527-64265546 | None:intergenic | 55.0% | |
| !! | TTCTGATTCGGGTTCTGGCC+CGG | + | chr8_3:64266675-64266694 | None:intergenic | 55.0% |
| CCATGAGTTTGAACCGGCAC+AGG | + | chr8_3:64266993-64267012 | None:intergenic | 55.0% | |
| !! | CCTGTGCCGGTTCAAACTCA+TGG | - | chr8_3:64266990-64267009 | Msa1301980:CDS | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+TGG | - | chr8_3:64267035-64267054 | Msa1301980:CDS | 55.0% |
| !! | GGAAAGAAAGGTGGTGGTGG+TGG | - | chr8_3:64267038-64267057 | Msa1301980:CDS | 55.0% |
| CCGGAGGCTAAAAATGGTGG+TGG | - | chr8_3:64267185-64267204 | Msa1301980:CDS | 55.0% | |
| !! | CAAAAAATGATGGGCGGCGG+CGG | - | chr8_3:64267335-64267354 | Msa1301980:intron | 55.0% |
| CATCCTCACCCTGCTATGAG+TGG | - | chr8_3:64267365-64267384 | Msa1301980:CDS | 55.0% | |
| !! | TGAAAGTATCCTCCGCCAGC+CGG | + | chr8_3:64267467-64267486 | None:intergenic | 55.0% |
| GCTGGCGGAGGATACTTTCA+AGG | - | chr8_3:64267467-64267486 | Msa1301980:intron | 55.0% | |
| GGCGGAGGATACTTTCAAGG+TGG | - | chr8_3:64267470-64267489 | Msa1301980:intron | 55.0% | |
| !! | TTTCAAGGTGGTGGTGGTCC+AGG | - | chr8_3:64267482-64267501 | Msa1301980:intron | 55.0% |
| TCCAGGCCCGGAAATGATGT+CGG | - | chr8_3:64267499-64267518 | Msa1301980:intron | 55.0% | |
| CCACCATTGCAGCACGTTGT+TGG | + | chr8_3:64267610-64267629 | None:intergenic | 55.0% | |
| CCAACAACGTGCTGCAATGG+TGG | - | chr8_3:64267607-64267626 | Msa1301980:five_prime_UTR | 55.0% | |
| GGAGGAGGATAAGGGTAAGG+AGG | + | chr8_3:64267701-64267720 | None:intergenic | 55.0% | |
| TGGCTGTAAGGATCTGGAGG+AGG | + | chr8_3:64267716-64267735 | None:intergenic | 55.0% | |
| GCATGGCTGTAAGGATCTGG+AGG | + | chr8_3:64267719-64267738 | None:intergenic | 55.0% | |
| CGTCGCCGGTAAGATCTCAG+TGG | + | chr8_3:64265497-64265516 | None:intergenic | 60.0% | |
| TGAGATCTTACCGGCGACGG+TGG | - | chr8_3:64265498-64265517 | Msa1301980:three_prime_UTR | 60.0% | |
| GATGCCGCTGAATCAGCACC+CGG | - | chr8_3:64266653-64266672 | Msa1301980:CDS | 60.0% | |
| ATGCCGCTGAATCAGCACCC+GGG | - | chr8_3:64266654-64266673 | Msa1301980:CDS | 60.0% | |
| !! | TCTGATTCGGGTTCTGGCCC+GGG | + | chr8_3:64266674-64266693 | None:intergenic | 60.0% |
| !! | AATGGCGGTGGTGGCGGAAA+CGG | - | chr8_3:64266945-64266964 | Msa1301980:CDS | 60.0% |
| GGAAACGGGCAGAAACCTGG+TGG | - | chr8_3:64266960-64266979 | Msa1301980:CDS | 60.0% | |
| AACGGGCAGAAACCTGGTGG+TGG | - | chr8_3:64266963-64266982 | Msa1301980:CDS | 60.0% | |
| ! | GGAGGAAAGAAAGGTGGCGG+CGG | - | chr8_3:64267107-64267126 | Msa1301980:CDS | 60.0% |
| GCACCACTCATAGCAGGGTG+AGG | + | chr8_3:64267371-64267390 | None:intergenic | 60.0% | |
| CACCCTGCTATGAGTGGTGC+AGG | - | chr8_3:64267371-64267390 | Msa1301980:CDS | 60.0% | |
| CCAGGCCCGGAAATGATGTC+GGG | - | chr8_3:64267500-64267519 | Msa1301980:intron | 60.0% | |
| GTGGCCACCGGCGTCATTCT+CGG | - | chr8_3:64265517-64265536 | Msa1301980:three_prime_UTR | 65.0% | |
| GAGACCGAGAATGACGCCGG+TGG | + | chr8_3:64265524-64265543 | None:intergenic | 65.0% | |
| !! | TGGCCCGGGTGCTGATTCAG+CGG | + | chr8_3:64266660-64266679 | None:intergenic | 65.0% |
| !! | ATGGCGGTGGTGGCGGAAAC+GGG | - | chr8_3:64266946-64266965 | Msa1301980:CDS | 65.0% |
| GGCGGAAACGGGCAGAAACC+TGG | - | chr8_3:64266957-64266976 | Msa1301980:CDS | 65.0% | |
| !! | GGGCAGAAACCTGGTGGTGG+AGG | - | chr8_3:64266966-64266985 | Msa1301980:CDS | 65.0% |
| !! | TGGTGGTGGAGGACCTGTGC+CGG | - | chr8_3:64266977-64266996 | Msa1301980:CDS | 65.0% |
| ! | GGAAAGAAAGGTGGCGGCGG+TGG | - | chr8_3:64267110-64267129 | Msa1301980:CDS | 65.0% |
| ! | AAGAAAGGTGGCGGCGGTGG+TGG | - | chr8_3:64267113-64267132 | Msa1301980:CDS | 65.0% |
| !! | AAAATGATGGGCGGCGGCGG+AGG | - | chr8_3:64267338-64267357 | Msa1301980:intron | 65.0% |
| GCTGTTCAAGGCCTACCGGC+TGG | - | chr8_3:64267449-64267468 | Msa1301980:intron | 65.0% | |
| ! | GTTCAAGGCCTACCGGCTGG+CGG | - | chr8_3:64267452-64267471 | Msa1301980:intron | 65.0% |
| AGTATCCTCCGCCAGCCGGT+AGG | + | chr8_3:64267463-64267482 | None:intergenic | 65.0% | |
| CCCGACATCATTTCCGGGCC+TGG | + | chr8_3:64267503-64267522 | None:intergenic | 65.0% | |
| TTACCGGCGACGGTGGCCAC+CGG | - | chr8_3:64265505-64265524 | Msa1301980:three_prime_UTR | 70.0% | |
| GGCACAGGTCCTCCACCACC+AGG | + | chr8_3:64266978-64266997 | None:intergenic | 70.0% | |
| ! | AAAGGTGGCGGCGGTGGTGG+AGG | - | chr8_3:64267116-64267135 | Msa1301980:CDS | 70.0% |
| !! | AGGTGGTGGTGGTCCAGGCC+CGG | - | chr8_3:64267487-64267506 | Msa1301980:intron | 70.0% |
| !! | ATGATGGGCGGCGGCGGAGG+TGG | - | chr8_3:64267341-64267360 | Msa1301980:intron | 75.0% |
| ! | CAAGGCCTACCGGCTGGCGG+AGG | - | chr8_3:64267455-64267474 | Msa1301980:intron | 75.0% |
| ! | ACGCCGGTGGCCACCGTCGC+CGG | + | chr8_3:64265511-64265530 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 64265431 | 64268029 | 64265431 | ID=Msa1301980;Name=Msa1301980 |
| chr8_3 | mRNA | 64265431 | 64268029 | 64265431 | ID=Msa1301980-mRNA-1;Parent=Msa1301980;Name=Msa1301980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=430|1|1|1|1|1|3|251|546 |
| chr8_3 | exon | 64265431 | 64267216 | 64265431 | ID=Msa1301980-mRNA-1:exon:19378;Parent=Msa1301980-mRNA-1 |
| chr8_3 | exon | 64267358 | 64267433 | 64267358 | ID=Msa1301980-mRNA-1:exon:19377;Parent=Msa1301980-mRNA-1 |
| chr8_3 | exon | 64267570 | 64268029 | 64267570 | ID=Msa1301980-mRNA-1:exon:19376;Parent=Msa1301980-mRNA-1 |
| chr8_3 | five_prime_UTR | 64267600 | 64268029 | 64267600 | ID=Msa1301980-mRNA-1:five_prime_utr;Parent=Msa1301980-mRNA-1 |
| chr8_3 | CDS | 64267570 | 64267599 | 64267570 | ID=Msa1301980-mRNA-1:cds;Parent=Msa1301980-mRNA-1 |
| chr8_3 | CDS | 64267358 | 64267433 | 64267358 | ID=Msa1301980-mRNA-1:cds;Parent=Msa1301980-mRNA-1 |
| chr8_3 | CDS | 64265682 | 64267216 | 64265682 | ID=Msa1301980-mRNA-1:cds;Parent=Msa1301980-mRNA-1 |
| chr8_3 | three_prime_UTR | 64265431 | 64265681 | 64265431 | ID=Msa1301980-mRNA-1:three_prime_utr;Parent=Msa1301980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
