AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1450730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450730 MtrunA17_Chr5g0396821 95.481 1040 41 3 1 1040 1 1034 0.0 2047
Msa1450730 MtrunA17_Chr8g0347471 49.818 823 334 16 275 1040 187 987 0.0 715
Msa1450730 MtrunA17_Chr2g0317491 41.162 826 412 15 272 1040 67 875 5.91e-180 546
Msa1450730 MtrunA17_Chr5g0438901 47.399 346 170 3 695 1039 341 675 6.88e-106 345
Msa1450730 MtrunA17_Chr2g0283891 30.323 155 105 2 782 933 113 267 3.94e-13 71.6
Msa1450730 MtrunA17_Chr1g0197551 23.643 258 183 9 789 1036 21 274 4.60e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450730 AT4G11110.1 47.280 1066 467 19 8 1040 33 1036 0.0 882
Msa1450730 AT2G46340.1 44.681 1081 496 24 2 1040 9 1029 0.0 800
Msa1450730 AT2G46340.2 44.681 1081 496 24 2 1040 9 1029 0.0 800
Msa1450730 AT1G53090.3 40.482 788 391 12 278 1040 60 794 0.0 553
Msa1450730 AT1G53090.1 40.482 788 391 12 278 1040 60 794 0.0 553
Msa1450730 AT1G53090.2 40.482 788 391 12 278 1040 60 794 0.0 553
Msa1450730 AT3G15354.3 40.000 815 407 14 272 1040 66 844 0.0 552
Msa1450730 AT3G15354.1 39.264 815 405 15 272 1040 66 836 1.36e-174 532
Msa1450730 AT3G15354.4 44.649 598 285 9 485 1040 1 594 6.20e-165 498
Msa1450730 AT3G15354.5 44.649 598 285 9 485 1040 1 594 6.20e-165 498
Msa1450730 AT1G53090.4 46.101 577 286 8 485 1040 1 573 2.40e-164 496
Msa1450730 AT2G32950.2 43.659 410 207 5 630 1039 175 560 6.81e-111 355
Msa1450730 AT2G32950.1 43.659 410 207 5 630 1039 288 673 2.99e-109 355
Msa1450730 AT1G53090.5 34.775 601 317 10 278 853 60 610 5.76e-99 325
Msa1450730 AT3G15354.2 34.505 626 331 12 272 851 66 658 6.82e-99 327
Msa1450730 AT5G52250.1 34.877 324 184 11 727 1037 71 380 9.09e-43 161
Msa1450730 AT5G23730.1 34.627 335 179 12 728 1036 41 361 1.14e-42 160
Msa1450730 AT2G21390.1 24.419 258 181 9 789 1036 21 274 1.59e-11 69.3
Msa1450730 AT3G49660.1 27.203 261 164 13 730 981 27 270 4.45e-11 65.9

Find 253 sgRNAs with CRISPR-Local

Find 608 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAGCTTCGCCACCATAAA+AGG 0.166205 tig0033043:+23328 Msa1450730:three_prime_UTR
GGGAATTCAATTAGTGATAT+TGG 0.180525 tig0033043:+15130 Msa1450730:CDS
TGGAAAGTTTAAATATATTT+AGG 0.190587 tig0033043:+15737 Msa1450730:CDS
TGTAACATACATGGATTTAT+TGG 0.199904 tig0033043:+23422 Msa1450730:three_prime_UTR
AAAGATTAAGACTTTGTAAT+TGG 0.204724 tig0033043:+23164 Msa1450730:three_prime_UTR
AACATCTTCCTCTGTTGATA+TGG 0.226062 tig0033043:+15915 Msa1450730:CDS
CTACAATCTGAAGTGATTAA+TGG 0.230123 tig0033043:+18148 Msa1450730:CDS
TATCAGATTGGAAATAATTC+AGG 0.230148 tig0033043:+15103 Msa1450730:CDS
GTTCTTAGTATATCTTTATC+TGG 0.244121 tig0033043:-18577 None:intergenic
TGTTGGATCCACCTCGTTTC+CGG 0.261043 tig0033043:+15198 Msa1450730:CDS
ATTCCGATTCTGCATCTTCT+TGG 0.266535 tig0033043:-18213 None:intergenic
TCCTCTCATTTGCTTGCCTT+TGG 0.266707 tig0033043:+21378 Msa1450730:CDS
GACGAGAGTGCGAGGGTTAC+TGG 0.269493 tig0033043:+15958 Msa1450730:CDS
ATTTAGGAAAATTGTGGATT+TGG 0.269624 tig0033043:+15753 Msa1450730:CDS
CATTCAGTCGTGCTAGATTT+AGG 0.275646 tig0033043:-15658 None:intergenic
CCTTTATACATCTCGAGTTT+TGG 0.280099 tig0033043:+22936 Msa1450730:three_prime_UTR
CCAAACTTGTGTGAAGTAAT+TGG 0.283179 tig0033043:-22690 None:intergenic
CCAAAACTCGAGATGTATAA+AGG 0.289627 tig0033043:-22936 None:intergenic
CCAATTACTTCACACAAGTT+TGG 0.299695 tig0033043:+22690 Msa1450730:CDS
CTGATAATTCATTGAAGATC+TGG 0.300298 tig0033043:+21532 Msa1450730:CDS
AAAGTGTTACAAATGGTTTA+AGG 0.300773 tig0033043:+22831 Msa1450730:CDS
AGAGAGCATATAACATTTGC+AGG 0.304868 tig0033043:-18748 None:intergenic
TCTTTCACATATAGAATTAC+TGG 0.313843 tig0033043:-16148 None:intergenic
GGAATTCAATTAGTGATATT+GGG 0.319812 tig0033043:+15131 Msa1450730:CDS
TTTGTATTGATAGCTAAATA+TGG 0.323505 tig0033043:+14795 Msa1450730:five_prime_UTR
ATACTCAGCAAACCCTGATT+TGG 0.324942 tig0033043:-15350 None:intergenic
CAATCTCAGTTCATTTGTAT+TGG 0.326529 tig0033043:-18470 None:intergenic
CATTAATCACTTCAGATTGT+AGG 0.328405 tig0033043:-18147 None:intergenic
AATTGGTCTGTGACCCAAAA+AGG 0.335217 tig0033043:+18607 Msa1450730:CDS
GTTCATTTGTATTGGAGATT+GGG 0.336479 tig0033043:-18462 None:intergenic
ATTTAATGTAAGATGGATAA+AGG 0.342528 tig0033043:-15813 None:intergenic
TGAAGTGATTAATGGATTAC+AGG 0.351762 tig0033043:+18156 Msa1450730:CDS
AGTTCATTTGTATTGGAGAT+TGG 0.355893 tig0033043:-18463 None:intergenic
AATTCTTCAACTGTTTCATA+TGG 0.361630 tig0033043:-14998 None:intergenic
ATACTTAATTGTTAAAGTTA+AGG 0.363277 tig0033043:+14821 Msa1450730:five_prime_UTR
GCTTTAGGAACCTTCTTTGA+TGG 0.364422 tig0033043:+18655 Msa1450730:CDS
TGTTTCAGAAATCTGAACTT+TGG 0.364662 tig0033043:-18539 None:intergenic
CAAAGCTTAGCTGTGTTTGC+TGG 0.367423 tig0033043:+18902 Msa1450730:CDS
GAAGTTCAAATGCCTTCAAT+TGG 0.370322 tig0033043:+16015 Msa1450730:CDS
ACATCTCAACAGCAGGATAA+TGG 0.370679 tig0033043:-18870 None:intergenic
ACAAAGATGATATCCAAATC+AGG 0.375965 tig0033043:+15337 Msa1450730:CDS
TACTAAGAACTCGCGAGAAT+TGG 0.379466 tig0033043:+18590 Msa1450730:CDS
TGGCAGAATCTTTATCAGAT+TGG 0.379730 tig0033043:+15091 Msa1450730:CDS
GCGGTGATGCGAATCAGAAT+TGG 0.379858 tig0033043:+15473 Msa1450730:CDS
CATAAAAGTAAAGATGCTTT+AGG 0.380101 tig0033043:+18640 Msa1450730:CDS
CGGTGATGCGAATCAGAATT+GGG 0.380736 tig0033043:+15474 Msa1450730:CDS
CTTCCTTAGGATGTTCTGAT+AGG 0.384102 tig0033043:-16892 None:intergenic
CTCTAATTGTTCAACCAACT+TGG 0.385891 tig0033043:-18287 None:intergenic
ACATCTTCCTCTGTTGATAT+GGG 0.391461 tig0033043:+15916 Msa1450730:CDS
GAAGATTACTTTGCTTCTGC+TGG 0.394367 tig0033043:+18787 Msa1450730:CDS
AAATCTGGCCAGCGCAAATC+AGG 0.395977 tig0033043:+15709 Msa1450730:CDS
CGCAGCTACGTCTAGTGCTT+GGG 0.397285 tig0033043:+15171 Msa1450730:CDS
CCGCAGCTACGTCTAGTGCT+TGG 0.400322 tig0033043:+15170 Msa1450730:CDS
ACTCGGGCCAATCAATTTGC+TGG 0.400585 tig0033043:+22899 Msa1450730:three_prime_UTR
ATCCCTCGTGTATCTAATTC+AGG 0.401971 tig0033043:+16111 Msa1450730:CDS
CCATCATCACGTCCAACAAC+AGG 0.401981 tig0033043:+16947 Msa1450730:CDS
ATAATGACAGTGTGGAATTC+TGG 0.408581 tig0033043:-23087 None:intergenic
AGAAAATCCTTGGTTTCCTC+TGG 0.410497 tig0033043:+18355 Msa1450730:CDS
ATCAGTCTCTTTACCAGAGA+TGG 0.417463 tig0033043:-22724 None:intergenic
GAAATTCTTTGGGCACAATC+AGG 0.417682 tig0033043:+21316 Msa1450730:CDS
TACATGAACAAAAGTCGGTT+TGG 0.419477 tig0033043:-14640 None:intergenic
TGATGAAAGAATTCAGTTAG+AGG 0.419881 tig0033043:+14862 Msa1450730:CDS
TTGAGAGAATGGTTAAAATC+TGG 0.420168 tig0033043:+15694 Msa1450730:CDS
TTTCAATAGTACCCTGTTGT+TGG 0.422547 tig0033043:-16959 None:intergenic
GCTCGCAGCCTAACCCTGTC+TGG 0.432747 tig0033043:+21594 Msa1450730:CDS
GGATCTATTGATCCCATCTC+TGG 0.434827 tig0033043:+22711 Msa1450730:CDS
AATCTGAACTTTGGATCTCA+TGG 0.436953 tig0033043:-18530 None:intergenic
TAGTATGTCCAGACAGGGTT+AGG 0.437776 tig0033043:-21602 None:intergenic
GAGTAATGCAGTTGAACATT+TGG 0.442426 tig0033043:+15255 Msa1450730:CDS
CCACTTTGCCTGATTTGCGC+TGG 0.443062 tig0033043:-15717 None:intergenic
GGTTGAACAATTAGAGTGCT+TGG 0.444330 tig0033043:+18294 Msa1450730:CDS
CAAAACTCGAGATGTATAAA+GGG 0.445416 tig0033043:-22935 None:intergenic
GTAATTCTATATGTGAAAGA+TGG 0.446114 tig0033043:+16151 Msa1450730:CDS
ACAATCCCCAGCAAATTGAT+TGG 0.449621 tig0033043:-22906 None:intergenic
GGTGGATGACTCACACTCTC+GGG 0.449991 tig0033043:+15774 Msa1450730:CDS
AAACAAATGAAGACTGGTAT+TGG 0.453637 tig0033043:+15556 Msa1450730:CDS
CAATGTCTGATCTTCATCAT+AGG 0.456778 tig0033043:+16852 Msa1450730:CDS
CATTCTCCACAATACTTGAA+TGG 0.458934 tig0033043:+22983 Msa1450730:three_prime_UTR
ATCAGATTGGAAATAATTCA+GGG 0.462085 tig0033043:+15104 Msa1450730:CDS
GTTGGACGTGATGATGGTTC+AGG 0.462126 tig0033043:-16941 None:intergenic
GTGGGTTTGTCTGTTGCTGA+TGG 0.464615 tig0033043:+22276 Msa1450730:CDS
AAATATATTTAGGAAAATTG+TGG 0.466422 tig0033043:+15747 Msa1450730:CDS
TGATAATTCATTGAAGATCT+GGG 0.466607 tig0033043:+21533 Msa1450730:CDS
TCAGCTATGGGATGCTAGTA+CGG 0.467085 tig0033043:+20164 Msa1450730:intron
ATTGGAAATAATTCAGGGAA+TGG 0.468351 tig0033043:+15109 Msa1450730:CDS
CCTGTTGTTGGACGTGATGA+TGG 0.468695 tig0033043:-16947 None:intergenic
CTCAATAAAACCTCTTCGGT+TGG 0.468709 tig0033043:+21558 Msa1450730:CDS
TATGCTCTCTAAGCTTTGAC+CGG 0.469053 tig0033043:+18761 Msa1450730:CDS
GCATGGCTTAAGAAAATCCT+TGG 0.470022 tig0033043:+18345 Msa1450730:CDS
CTCGGGCCAATCAATTTGCT+GGG 0.471329 tig0033043:+22900 Msa1450730:three_prime_UTR
GTCTGGACATACTAATGAAA+AGG 0.473081 tig0033043:+21611 Msa1450730:CDS
TCATGATTATTAGCAGTCTC+AGG 0.473314 tig0033043:-15994 None:intergenic
TTTCATTAGTATGTCCAGAC+AGG 0.474015 tig0033043:-21608 None:intergenic
AGTTTGTTTCAAGTGTGTGC+TGG 0.474338 tig0033043:+22760 Msa1450730:CDS
TTCTTAGTATATCTTTATCT+GGG 0.477468 tig0033043:-18576 None:intergenic
AGACAAAATCCAGCTTCCTT+AGG 0.483629 tig0033043:-16905 None:intergenic
GCTTAAGATTTGACGCAGAA+AGG 0.483942 tig0033043:+22958 Msa1450730:three_prime_UTR
ATGTATAAAAGTGTTACAAA+TGG 0.485163 tig0033043:+22824 Msa1450730:CDS
TTTGGCGGCTGCGGAAAGTA+AGG 0.486066 tig0033043:+15273 Msa1450730:CDS
AGACCAAGAAGATGCAGAAT+CGG 0.486392 tig0033043:+18210 Msa1450730:CDS
CTCAAAGTCTGCTAAGTGCT+TGG 0.486767 tig0033043:+23198 Msa1450730:three_prime_UTR
GGTAGCAATTTAATGTAAGA+TGG 0.487289 tig0033043:-15820 None:intergenic
AATCCTTGGTTTCCTCTGGC+TGG 0.487954 tig0033043:+18359 Msa1450730:CDS
TTGGAAATAATTCAGGGAAT+GGG 0.490364 tig0033043:+15110 Msa1450730:CDS
AAAACAAACGGCAGGTAAAA+GGG 0.490416 tig0033043:+15879 Msa1450730:CDS
ATTGATTGGCCCGAGTGACC+AGG 0.491878 tig0033043:-22892 None:intergenic
TAGAAGTCCCTGGTGTGTAT+TGG 0.493208 tig0033043:+21443 Msa1450730:CDS
GGATGTTCTGATAGGAAAGC+TGG 0.493573 tig0033043:-16884 None:intergenic
CAAACCAGGTCATGTACATT+GGG 0.496767 tig0033043:+15845 Msa1450730:CDS
GGATCTCAATAAAACCTCTT+CGG 0.497863 tig0033043:+21554 Msa1450730:CDS
AGTTGAACATTTGGCGGCTG+CGG 0.498441 tig0033043:+15264 Msa1450730:CDS
TCAGAACATCCTAAGGAAGC+TGG 0.499024 tig0033043:+16896 Msa1450730:CDS
TGGTGGATGACTCACACTCT+CGG 0.500502 tig0033043:+15773 Msa1450730:CDS
GTGAACATGAAAAGAGGGCT+TGG 0.501727 tig0033043:+20208 Msa1450730:CDS
AATCCGACTTCAAGAAGATC+GGG 0.502575 tig0033043:-23029 None:intergenic
GAGCAAAATCAGACAAAGGC+AGG 0.503141 tig0033043:+15451 Msa1450730:CDS
CTTCTTGCTGCCAATTCAAG+TGG 0.504977 tig0033043:+22801 Msa1450730:CDS
GATATTGGGTTGATTAGTAG+TGG 0.505458 tig0033043:+15145 Msa1450730:CDS
TTCATTTGTATTGGAGATTG+GGG 0.507234 tig0033043:-18461 None:intergenic
AAGATTACTTTGCTTCTGCT+GGG 0.507710 tig0033043:+18788 Msa1450730:CDS
TAAGTGCTTGGCTGAGCCTA+TGG 0.509447 tig0033043:+23210 Msa1450730:three_prime_UTR
TAGGAAAATTGTGGATTTGG+TGG 0.511869 tig0033043:+15756 Msa1450730:CDS
ACTGCAGCATCGCTGTGAAT+CGG 0.512278 tig0033043:-15634 None:intergenic
ATGTACATGACCTGGTTTGA+TGG 0.512767 tig0033043:-15841 None:intergenic
ATATATTAATGTAACATACA+TGG 0.514161 tig0033043:+23413 Msa1450730:three_prime_UTR
ACGAGAGTGCGAGGGTTACT+GGG 0.515885 tig0033043:+15959 Msa1450730:CDS
GTCGTAAAATCCCAATATGA+TGG 0.518250 tig0033043:+14923 Msa1450730:CDS
TCAAACCAGGTCATGTACAT+TGG 0.518776 tig0033043:+15844 Msa1450730:CDS
CGGGTCTACACACCTCGAAA+AGG 0.518792 tig0033043:-16245 None:intergenic
CATGGGAAGCGACTTATAGT+AGG 0.520691 tig0033043:-22667 None:intergenic
GATATTGTGCAACCTCCCTC+AGG 0.523069 tig0033043:-16195 None:intergenic
GGTTAGGCTGCGAGCACTAG+TGG 0.523379 tig0033043:-21586 None:intergenic
AATTCAGTTAGAGGCTGTTG+AGG 0.529039 tig0033043:+14871 Msa1450730:CDS
TAATTGTTCAACCAACTTGG+AGG 0.530716 tig0033043:-18284 None:intergenic
TTACAACAAGCTTGAAGTGC+GGG 0.531222 tig0033043:+18696 Msa1450730:CDS
AAAGTCGGTTTGGAAAGAAA+AGG 0.531319 tig0033043:-14630 None:intergenic
GTGAAAGATGGGAAAATAAG+TGG 0.531333 tig0033043:+16163 Msa1450730:CDS
AGAGGAAGATGTTACTTGCT+CGG 0.532696 tig0033043:-15905 None:intergenic
CTGTTTGACATCTCAACAGC+AGG 0.533413 tig0033043:-18877 None:intergenic
ATTGCTCCATTCAAGTATTG+TGG 0.535442 tig0033043:-22989 None:intergenic
TGTAGGAGAGCCATCGTCAA+GGG 0.538797 tig0033043:-22862 None:intergenic
CTCATCAAAAGAGAAGAAGC+AGG 0.539036 tig0033043:+18255 Msa1450730:CDS
AATACAGTGAACATGAAAAG+AGG 0.539565 tig0033043:+20202 Msa1450730:CDS
CAGCTATGGGATGCTAGTAC+GGG 0.540078 tig0033043:+20165 Msa1450730:intron
TAATGCAGTTGAACATTTGG+CGG 0.540996 tig0033043:+15258 Msa1450730:CDS
GAATCCGACTTCAAGAAGAT+CGG 0.541995 tig0033043:-23030 None:intergenic
TAATTCTATATGTGAAAGAT+GGG 0.542817 tig0033043:+16152 Msa1450730:CDS
GTGATGTTCATCGAGGAATA+CGG 0.544130 tig0033043:+15314 Msa1450730:CDS
TCTAGTGCTTGGGAGGATGT+TGG 0.545873 tig0033043:+15181 Msa1450730:CDS
TCGGTTTGGAAAGAAAAGGT+TGG 0.546691 tig0033043:-14626 None:intergenic
ATAGCTTCGCCACCATAAAA+GGG 0.547516 tig0033043:+23329 Msa1450730:three_prime_UTR
AAATTATCGTAACAGATATG+AGG 0.547870 tig0033043:+16044 Msa1450730:CDS
ATCTTTATCTGGGTGATCTG+TGG 0.548330 tig0033043:-18566 None:intergenic
TTTCCTATCAGAACATCCTA+AGG 0.555337 tig0033043:+16889 Msa1450730:CDS
GTTTCAAGTGTGTGCTGGAG+AGG 0.558709 tig0033043:+22765 Msa1450730:CDS
TCAGTCTCTTTACCAGAGAT+GGG 0.559728 tig0033043:-22723 None:intergenic
TCATCAAACATCTACTGCCT+CGG 0.561737 tig0033043:+16216 Msa1450730:CDS
TTCGCAATCTTAGAAGTCCC+TGG 0.562968 tig0033043:+21433 Msa1450730:CDS
AATCAGAAACAAATGAAGAC+TGG 0.563404 tig0033043:+15550 Msa1450730:CDS
ACATAAACGCGATCAGAAGC+TGG 0.563636 tig0033043:-15418 None:intergenic
GGACTTACATGAACAAAAGT+CGG 0.568952 tig0033043:-14645 None:intergenic
AATCCCGATCTTCTTGAAGT+CGG 0.570410 tig0033043:+23026 Msa1450730:three_prime_UTR
CAAAGATGATATCCAAATCA+GGG 0.570823 tig0033043:+15338 Msa1450730:CDS
AAAAGTAAGCACTTTCAAGA+TGG 0.572294 tig0033043:-18507 None:intergenic
CATTATGTCATATTTAACAA+AGG 0.572460 tig0033043:+23104 Msa1450730:three_prime_UTR
TTGGAGATTGGGGACACTGT+GGG 0.573052 tig0033043:-18451 None:intergenic
AAGGAGGGTGTAGGACCCGC+AGG 0.573680 tig0033043:+15292 Msa1450730:CDS
AAGTGGTATGCGAGTCCTGA+GGG 0.573844 tig0033043:+16180 Msa1450730:CDS
AGTAAGGGTGTTGTACGTAA+AGG 0.574103 tig0033043:+15394 Msa1450730:CDS
CTCAAGTTCAACATAAACAT+TGG 0.574254 tig0033043:+15071 Msa1450730:CDS
CATCTTCCTCTGTTGATATG+GGG 0.576607 tig0033043:+15917 Msa1450730:CDS
CTTGCACAAACCATCAAAGA+AGG 0.577758 tig0033043:-18665 None:intergenic
TAATTGTTAAAGTTAAGGCA+TGG 0.582365 tig0033043:+14826 Msa1450730:exon
CAAGCACTAGACGTAGCTGC+GGG 0.585754 tig0033043:-15169 None:intergenic
AGTACAATCATCACTTCCAC+TGG 0.586568 tig0033043:-20268 None:intergenic
AATCAGAATTGGGGTAAGAT+CGG 0.586685 tig0033043:+15484 Msa1450730:CDS
GAAGAGGCAGAGAGGAGGCA+TGG 0.588049 tig0033043:+18328 Msa1450730:CDS
AATTGGGGTAAGATCGGCGT+TGG 0.590002 tig0033043:+15490 Msa1450730:CDS
AGTCCCTGGTGTGTATTGGC+TGG 0.591751 tig0033043:+21447 Msa1450730:CDS
TGAGTAATTCGCAGATCCAA+AGG 0.594338 tig0033043:-21394 None:intergenic
CCTCGATGAACATCACCTGC+GGG 0.594373 tig0033043:-15307 None:intergenic
ATACAGTGAACATGAAAAGA+GGG 0.594379 tig0033043:+20203 Msa1450730:CDS
ACGGTGTAACATTGAGAGAA+TGG 0.595622 tig0033043:+15683 Msa1450730:CDS
TTCATTAGTATGTCCAGACA+GGG 0.595786 tig0033043:-21607 None:intergenic
ATATTGGGTTGATTAGTAGT+GGG 0.599244 tig0033043:+15146 Msa1450730:CDS
TTGATTGGCCCGAGTGACCA+GGG 0.599909 tig0033043:-22891 None:intergenic
TTTCAAGTGTGTGCTGGAGA+GGG 0.601436 tig0033043:+22766 Msa1450730:CDS
GCAGGGTGATGCCTCCAAGT+TGG 0.602461 tig0033043:+18273 Msa1450730:CDS
CAGATATAGAAGAGGCAGAG+AGG 0.604924 tig0033043:+18320 Msa1450730:CDS
ATTACAGGAGTTGTGTAATG+AGG 0.606394 tig0033043:+18171 Msa1450730:CDS
GGCGGCTGCGGAAAGTAAGG+AGG 0.607941 tig0033043:+15276 Msa1450730:CDS
GCTAGAAAATCGCATAGTGA+TGG 0.608608 tig0033043:+15229 Msa1450730:CDS
CTTGGAATCAGATATAGAAG+AGG 0.610271 tig0033043:+18312 Msa1450730:CDS
ATGCTCTCTAAGCTTTGACC+GGG 0.612774 tig0033043:+18762 Msa1450730:CDS
AGCTACGTCTAGTGCTTGGG+AGG 0.615576 tig0033043:+15174 Msa1450730:CDS
AAGCAAAGTAATCTTCATCC+CGG 0.620471 tig0033043:-18780 None:intergenic
AGACTACGACGGTGTAGTGA+AGG 0.621641 tig0033043:+18957 Msa1450730:CDS
GAGATTGGGGACACTGTGGG+CGG 0.622277 tig0033043:-18448 None:intergenic
CCAGCGCAAATCAGGCAAAG+TGG 0.623535 tig0033043:+15717 Msa1450730:CDS
ATGTAGGAGAGCCATCGTCA+AGG 0.624373 tig0033043:-22863 None:intergenic
TTGTGTGAAGTAATTGGCAT+GGG 0.625244 tig0033043:-22684 None:intergenic
TCCAAAGGCAAGCAAATGAG+AGG 0.625566 tig0033043:-21379 None:intergenic
GCGGAAAGTAAGGAGGGTGT+AGG 0.626048 tig0033043:+15283 Msa1450730:CDS
GTCTACACACCTCGAAAAGG+AGG 0.626294 tig0033043:-16242 None:intergenic
GTGGATGACTCACACTCTCG+GGG 0.627042 tig0033043:+15775 Msa1450730:CDS
CATCGCAATGAGCATAAGCA+AGG 0.627175 tig0033043:+23052 Msa1450730:three_prime_UTR
ATGGCCAGCCAATACACACC+AGG 0.627800 tig0033043:-21451 None:intergenic
AAAATTTGACGAGAGTGCGA+GGG 0.629892 tig0033043:+15951 Msa1450730:CDS
GACCACAATACAATTTCCAT+AGG 0.630716 tig0033043:-23226 None:intergenic
TAGAGAGCAAAATCAGACAA+AGG 0.631176 tig0033043:+15447 Msa1450730:CDS
CCAAGCACTAGACGTAGCTG+CGG 0.631837 tig0033043:-15170 None:intergenic
CACTTGAAACAAACTGACCA+TGG 0.631982 tig0033043:-22752 None:intergenic
AGCTAATAACTCCGGAAACG+AGG 0.632584 tig0033043:-15209 None:intergenic
TCCTCGATGAACATCACCTG+CGG 0.634907 tig0033043:-15308 None:intergenic
TCGGGCCAATCAATTTGCTG+GGG 0.644939 tig0033043:+22901 Msa1450730:three_prime_UTR
CTTGTGTGAAGTAATTGGCA+TGG 0.647108 tig0033043:-22685 None:intergenic
ATATAGAAGAGGCAGAGAGG+AGG 0.647655 tig0033043:+18323 Msa1450730:CDS
ATTGGAGATTGGGGACACTG+TGG 0.648633 tig0033043:-18452 None:intergenic
TCATCAAAAGAGAAGAAGCA+GGG 0.652591 tig0033043:+18256 Msa1450730:CDS
CATAGCTTACAGCTTTACGA+TGG 0.656922 tig0033043:-21470 None:intergenic
GCGGCTGCGGAAAGTAAGGA+GGG 0.659078 tig0033043:+15277 Msa1450730:CDS
TAAATTGCTACCATCAAACC+AGG 0.660402 tig0033043:+15831 Msa1450730:CDS
CTTGGACCCCATATCAACAG+AGG 0.661094 tig0033043:-15923 None:intergenic
CTGCCAGCCAGAGGAAACCA+AGG 0.661718 tig0033043:-18362 None:intergenic
TGCCCTACAAAATTTGCCAG+TGG 0.662507 tig0033043:+20252 Msa1450730:CDS
AGCCTATGGAAATTGTATTG+TGG 0.664946 tig0033043:+23224 Msa1450730:three_prime_UTR
CATCATCACGTCCAACAACA+GGG 0.666527 tig0033043:+16948 Msa1450730:CDS
AGTGGATGAACCAACCGAAG+AGG 0.670752 tig0033043:-21568 None:intergenic
TACACCGTCGTAGTCTGTAG+AGG 0.672028 tig0033043:-18950 None:intergenic
TACAACAAGCTTGAAGTGCG+GGG 0.673879 tig0033043:+18697 Msa1450730:CDS
TCTAATGTTTCAGTGAACCG+TGG 0.676680 tig0033043:+15592 Msa1450730:CDS
GTAACCCAATGTACATGACC+TGG 0.681232 tig0033043:-15849 None:intergenic
GTTACAACAAGCTTGAAGTG+CGG 0.682697 tig0033043:+18695 Msa1450730:CDS
AATATGACATAATGACAGTG+TGG 0.686569 tig0033043:-23095 None:intergenic
GCTGATGGATATATTGCATG+CGG 0.691894 tig0033043:+22291 Msa1450730:CDS
GTAATTGTTCTGCCAGCCAG+AGG 0.692765 tig0033043:-18371 None:intergenic
GGTGATGCGAATCAGAATTG+GGG 0.694044 tig0033043:+15475 Msa1450730:CDS
ATGATTGTACTGTCAAGCTG+TGG 0.694220 tig0033043:+20280 Msa1450730:CDS
CAAAATCAGACAAAGGCAGG+CGG 0.694575 tig0033043:+15454 Msa1450730:CDS
TAATAACTCCGGAAACGAGG+TGG 0.696527 tig0033043:-15206 None:intergenic
TGTTCTGATAGGAAAGCTGG+AGG 0.696572 tig0033043:-16881 None:intergenic
TGACCTGAATTAGATACACG+AGG 0.698186 tig0033043:-16114 None:intergenic
GACCTGAATTAGATACACGA+GGG 0.702403 tig0033043:-16113 None:intergenic
TGGTATGCGAGTCCTGAGGG+AGG 0.704127 tig0033043:+16183 Msa1450730:CDS
TAAGTGGTATGCGAGTCCTG+AGG 0.705242 tig0033043:+16179 Msa1450730:CDS
TGGCCAGCCAATACACACCA+GGG 0.709578 tig0033043:-21450 None:intergenic
TCTAGCACGACTGAATGTGA+CGG 0.713007 tig0033043:+15664 Msa1450730:CDS
CCCGCAGGTGATGTTCATCG+AGG 0.729473 tig0033043:+15307 Msa1450730:CDS
CCTCGAAAAGGAGGACACCG+AGG 0.731822 tig0033043:-16233 None:intergenic
CTTGCCTCTACAGACTACGA+CGG 0.736845 tig0033043:+18946 Msa1450730:CDS
CAAGCTGTGGAGCATCAGTG+AGG 0.737737 tig0033043:+20293 Msa1450730:CDS
AAAGAGACTGATGATGACCA+TGG 0.778100 tig0033043:+22735 Msa1450730:CDS
ATGCGGTTCAGAATCAAACG+AGG 0.781275 tig0033043:+22308 Msa1450730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTTAATTCATTGAA+AGG - tig0033043:16716-16735 None:intergenic 10.0%
!! TTTAGTTAATAATTATGAAA+AGG - tig0033043:17274-17293 None:intergenic 10.0%
!!! TATTTTTTAATGAAATTATG+CGG + tig0033043:17554-17573 Msa1450730:intron 10.0%
!!! AAAAAATTCTGAATTTTTTT+TGG + tig0033043:17700-17719 Msa1450730:intron 10.0%
!!! TGAAAATTGAAAATTTTATA+GGG + tig0033043:17816-17835 Msa1450730:intron 10.0%
!! TTTAATGTTACTAATTAAAA+AGG + tig0033043:22361-22380 Msa1450730:intron 10.0%
!! GAATAAAAAAAAAAATGAAA+AGG - tig0033043:23251-23270 None:intergenic 10.0%
!!! ATTTTTTTTTTTATTCACAA+AGG + tig0033043:23255-23274 Msa1450730:three_prime_UTR 10.0%
!!! TAATTTATTTGATTTATCCA+TGG + tig0033043:14760-14779 Msa1450730:intron 15.0%
!! ATACTTAATTGTTAAAGTTA+AGG + tig0033043:14821-14840 Msa1450730:five_prime_UTR 15.0%
!! TGGAAAGTTTAAATATATTT+AGG + tig0033043:15737-15756 Msa1450730:CDS 15.0%
!! AAATATATTTAGGAAAATTG+TGG + tig0033043:15747-15766 Msa1450730:CDS 15.0%
!!! ATTTTTCTGTGTATAATTTT+GGG + tig0033043:16076-16095 Msa1450730:CDS 15.0%
!! AGTCAATAATATTAACTAAT+TGG + tig0033043:16649-16668 Msa1450730:intron 15.0%
!! TATTAACTAATTGGTATAAT+TGG + tig0033043:16658-16677 Msa1450730:intron 15.0%
!! CTTTGATAAAATTGTAAATA+TGG + tig0033043:17077-17096 Msa1450730:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - tig0033043:17503-17522 None:intergenic 15.0%
!!! AAATTTTCAATTTTCACTTT+TGG - tig0033043:17812-17831 None:intergenic 15.0%
!!! GTGAAAATTGAAAATTTTAT+AGG + tig0033043:17815-17834 Msa1450730:intron 15.0%
!! CCTATTTATAAGAAAAATTT+GGG - tig0033043:19658-19677 None:intergenic 15.0%
!! TCCTATTTATAAGAAAAATT+TGG - tig0033043:19659-19678 None:intergenic 15.0%
!!! AGATTTTCAAAAAAAATGAA+TGG - tig0033043:21049-21068 None:intergenic 15.0%
!!! TTTTTTGAAAATCTAAACAA+TGG + tig0033043:21055-21074 Msa1450730:intron 15.0%
!!! AAATAAGTAAAGTTCTAAAA+TGG - tig0033043:21719-21738 None:intergenic 15.0%
!!! ATTTTAGAACTTTACTTATT+TGG + tig0033043:21718-21737 Msa1450730:intron 15.0%
!!! TTTTAGAACTTTACTTATTT+GGG + tig0033043:21719-21738 Msa1450730:intron 15.0%
!! ATATATTAATGTAACATACA+TGG + tig0033043:23413-23432 Msa1450730:three_prime_UTR 15.0%
!! AATAAATAGTGAGAATTGAA+AGG - tig0033043:14674-14693 None:intergenic 20.0%
!!! TTTGTATTGATAGCTAAATA+TGG + tig0033043:14795-14814 Msa1450730:five_prime_UTR 20.0%
!!! TACATTTTTACCATCATATT+GGG - tig0033043:14936-14955 None:intergenic 20.0%
!! TTAACAGTAAAAAGTTACAA+TGG + tig0033043:15019-15038 Msa1450730:CDS 20.0%
!!! AATGGTTTTAGTTTTGATAT+TGG + tig0033043:15037-15056 Msa1450730:CDS 20.0%
!! ATTTAATGTAAGATGGATAA+AGG - tig0033043:15816-15835 None:intergenic 20.0%
!! CAAAATTATACACAGAAAAA+TGG - tig0033043:16077-16096 None:intergenic 20.0%
!!! CATTTTTCTGTGTATAATTT+TGG + tig0033043:16075-16094 Msa1450730:CDS 20.0%
!! TAATTCTATATGTGAAAGAT+GGG + tig0033043:16152-16171 Msa1450730:CDS 20.0%
!! TGCATTTAAATAATGAACAA+AGG - tig0033043:16280-16299 None:intergenic 20.0%
!! AACAATGTCTATTTAAATCA+TGG + tig0033043:17100-17119 Msa1450730:intron 20.0%
!! CTGCATAAATAAATAAAACA+GGG - tig0033043:17304-17323 None:intergenic 20.0%
!! TCTGCATAAATAAATAAAAC+AGG - tig0033043:17305-17324 None:intergenic 20.0%
!! CTATTTAATAAAGCTCATTT+CGG - tig0033043:17401-17420 None:intergenic 20.0%
!!! GAAATGAGCTTTATTAAATA+GGG + tig0033043:17400-17419 Msa1450730:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG - tig0033043:17876-17895 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - tig0033043:17504-17523 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + tig0033043:17507-17526 Msa1450730:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + tig0033043:17784-17803 Msa1450730:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + tig0033043:17785-17804 Msa1450730:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + tig0033043:17876-17895 Msa1450730:intron 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG - tig0033043:17416-17435 None:intergenic 20.0%
!! CACATACGTATTATTTAATA+GGG - tig0033043:17919-17938 None:intergenic 20.0%
!! TCACATACGTATTATTTAAT+AGG - tig0033043:17920-17939 None:intergenic 20.0%
!! ATGCTGTTAATTCTATAATT+TGG + tig0033043:18025-18044 Msa1450730:intron 20.0%
!! TTTAGGAAATCATATCAATA+AGG - tig0033043:18066-18085 None:intergenic 20.0%
!! TTCTTAGTATATCTTTATCT+GGG - tig0033043:18579-18598 None:intergenic 20.0%
!! TGATAAAACAATAATTCAAG+CGG - tig0033043:18998-19017 None:intergenic 20.0%
!! TATTTATGTATTTAGTATGC+TGG + tig0033043:19447-19466 Msa1450730:intron 20.0%
!! ATTTATGTATTTAGTATGCT+GGG + tig0033043:19448-19467 Msa1450730:intron 20.0%
!! ATTTGATACAATTCATTCAT+TGG + tig0033043:19488-19507 Msa1450730:intron 20.0%
!!! CCCAAATTTTTCTTATAAAT+AGG + tig0033043:19655-19674 Msa1450730:intron 20.0%
!!! ATTTTTCTTATAAATAGGAC+CGG + tig0033043:19660-19679 Msa1450730:intron 20.0%
!!! TCAATTTTACAAATGATGAT+TGG - tig0033043:20062-20081 None:intergenic 20.0%
!!! TTTTTCGTCTTCTTTTTAAT+TGG - tig0033043:20744-20763 None:intergenic 20.0%
!! TTATAAAAACACAAAGAACA+TGG + tig0033043:20808-20827 Msa1450730:intron 20.0%
!! TTCAAAAAAAATGAATGGAA+TGG - tig0033043:21044-21063 None:intergenic 20.0%
!! TTGTTTCAATTGATGTAATA+GGG - tig0033043:21123-21142 None:intergenic 20.0%
!! TTTGTTTCAATTGATGTAAT+AGG - tig0033043:21124-21143 None:intergenic 20.0%
!!! TTCTAAAATGGAAGTTTAAA+AGG - tig0033043:21707-21726 None:intergenic 20.0%
!!! AAACGTGAACAATTTATTTT+TGG - tig0033043:21817-21836 None:intergenic 20.0%
!!! ATTTTTTTTCAAAAGTTCTC+TGG - tig0033043:21955-21974 None:intergenic 20.0%
!!! GAACTTTTGAAAAAAAATTG+AGG + tig0033043:21957-21976 Msa1450730:intron 20.0%
!! ATAAAACCATAAACAAACAT+TGG - tig0033043:22211-22230 None:intergenic 20.0%
!!! TGTTTATGGTTTTATCAAAT+TGG + tig0033043:22216-22235 Msa1450730:intron 20.0%
!!! ATGTATAAAAGTGTTACAAA+TGG + tig0033043:22824-22843 Msa1450730:CDS 20.0%
!! CATTATGTCATATTTAACAA+AGG + tig0033043:23104-23123 Msa1450730:three_prime_UTR 20.0%
!!! TTGTTATACATAATTTTTCC+TGG + tig0033043:23128-23147 Msa1450730:three_prime_UTR 20.0%
!! AAAGATTAAGACTTTGTAAT+TGG + tig0033043:23164-23183 Msa1450730:three_prime_UTR 20.0%
! AGAATTAAGCAATAGAGATA+TGG - tig0033043:14706-14725 None:intergenic 25.0%
! ACAAAAATTAAAACTGTCCA+TGG - tig0033043:14780-14799 None:intergenic 25.0%
! TAATTGTTAAAGTTAAGGCA+TGG + tig0033043:14826-14845 Msa1450730:exon 25.0%
!! CTACATTTTTACCATCATAT+TGG - tig0033043:14937-14956 None:intergenic 25.0%
! AATTCTTCAACTGTTTCATA+TGG - tig0033043:15001-15020 None:intergenic 25.0%
! TATCAGATTGGAAATAATTC+AGG + tig0033043:15103-15122 Msa1450730:CDS 25.0%
! ATCAGATTGGAAATAATTCA+GGG + tig0033043:15104-15123 Msa1450730:CDS 25.0%
! GGAATTCAATTAGTGATATT+GGG + tig0033043:15131-15150 Msa1450730:CDS 25.0%
! TAAAAATACGTTGAAGAGTA+AGG + tig0033043:15378-15397 Msa1450730:CDS 25.0%
! AAAAATACGTTGAAGAGTAA+GGG + tig0033043:15379-15398 Msa1450730:CDS 25.0%
! ATTTAGGAAAATTGTGGATT+TGG + tig0033043:15753-15772 Msa1450730:CDS 25.0%
!! TAATTTTGTGATCCAATTGA+AGG - tig0033043:16030-16049 None:intergenic 25.0%
! AAATTATCGTAACAGATATG+AGG + tig0033043:16044-16063 Msa1450730:CDS 25.0%
! TCTTTCACATATAGAATTAC+TGG - tig0033043:16151-16170 None:intergenic 25.0%
! GTAATTCTATATGTGAAAGA+TGG + tig0033043:16151-16170 Msa1450730:CDS 25.0%
!! TAAAAACGTATCTCATTTTG+AGG - tig0033043:16340-16359 None:intergenic 25.0%
! AAAAATATATAGACAGAAGC+GGG - tig0033043:16419-16438 None:intergenic 25.0%
! CAAAAATATATAGACAGAAG+CGG - tig0033043:16420-16439 None:intergenic 25.0%
!!! CTTCTGTCTATATATTTTTG+AGG + tig0033043:16420-16439 Msa1450730:intron 25.0%
!!! ATATATTTTTGAGGTCAACA+TGG + tig0033043:16429-16448 Msa1450730:intron 25.0%
! AAGTAACTTAATGTGCAATA+AGG + tig0033043:16681-16700 Msa1450730:intron 25.0%
! CAAAAGATAGATTTGTAGAT+CGG - tig0033043:17054-17073 None:intergenic 25.0%
!!! CGAAATGAGCTTTATTAAAT+AGG + tig0033043:17399-17418 Msa1450730:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG - tig0033043:17875-17894 None:intergenic 25.0%
! CGAAAAGTTGACATATTTAT+AGG + tig0033043:17875-17894 Msa1450730:intron 25.0%
! TCAACATAAGTTAAAGCTTT+AGG - tig0033043:18083-18102 None:intergenic 25.0%
!!! TGACAAAAGTTTTAGCTTTA+GGG - tig0033043:18113-18132 None:intergenic 25.0%
!! TAAAACTTTTGTCACATAAC+AGG + tig0033043:18119-18138 Msa1450730:intron 25.0%
!! AAAACTTTTGTCACATAACA+GGG + tig0033043:18120-18139 Msa1450730:intron 25.0%
! CTGAGATTGATGAAAAATAT+AGG + tig0033043:18484-18503 Msa1450730:CDS 25.0%
! GTTCTTAGTATATCTTTATC+TGG - tig0033043:18580-18599 None:intergenic 25.0%
! CATAAAAGTAAAGATGCTTT+AGG + tig0033043:18640-18659 Msa1450730:CDS 25.0%
! AATTCCACATATATCACTAA+GGG - tig0033043:19046-19065 None:intergenic 25.0%
! TAATTCCACATATATCACTA+AGG - tig0033043:19047-19066 None:intergenic 25.0%
! TCATCCTTTACTTGAATATT+TGG + tig0033043:19111-19130 Msa1450730:intron 25.0%
! CATCCTTTACTTGAATATTT+GGG + tig0033043:19112-19131 Msa1450730:intron 25.0%
! TAACCCAAATATTCAAGTAA+AGG - tig0033043:19118-19137 None:intergenic 25.0%
! AAAACTATTCTCTCCATTTA+GGG - tig0033043:19150-19169 None:intergenic 25.0%
! TAAAACTATTCTCTCCATTT+AGG - tig0033043:19151-19170 None:intergenic 25.0%
!!! AGTTTTAATTTTCTCAAGAG+TGG + tig0033043:19164-19183 Msa1450730:intron 25.0%
! GATTCTTAAAAGTTACACAT+AGG + tig0033043:19282-19301 Msa1450730:intron 25.0%
! TCATTCATTGGATACAATTA+TGG + tig0033043:19500-19519 Msa1450730:intron 25.0%
! CATTCATTGGATACAATTAT+GGG + tig0033043:19501-19520 Msa1450730:intron 25.0%
! ATTCATTGGATACAATTATG+GGG + tig0033043:19502-19521 Msa1450730:intron 25.0%
! ATCATGTACCAGTAAAAAAT+GGG + tig0033043:19719-19738 Msa1450730:intron 25.0%
! ATTCATACCATGAATAATTC+TGG - tig0033043:20130-20149 None:intergenic 25.0%
!!! CTTACTGAGTTTTTTTTTGT+TGG + tig0033043:20458-20477 Msa1450730:intron 25.0%
!!! ATGTTTATATGGCGATTTTT+TGG - tig0033043:20533-20552 None:intergenic 25.0%
! TGAAATGAAATGAAATGGAA+TGG - tig0033043:21100-21119 None:intergenic 25.0%
! GATGCAAAATTTATGTTTCA+TGG - tig0033043:21198-21217 None:intergenic 25.0%
! AAGAAACTAGATTGTATGTT+TGG - tig0033043:21251-21270 None:intergenic 25.0%
!! TTTTTCACAGAGAAATTCTT+TGG + tig0033043:21305-21324 Msa1450730:intron 25.0%
!! TTTTCACAGAGAAATTCTTT+GGG + tig0033043:21306-21325 Msa1450730:intron 25.0%
! TGATAATTCATTGAAGATCT+GGG + tig0033043:21533-21552 Msa1450730:CDS 25.0%
! CTGTATGAAATTTATGTTTG+TGG + tig0033043:21656-21675 Msa1450730:intron 25.0%
! AAATTGTTTCCTTATCTGAA+TGG + tig0033043:21758-21777 Msa1450730:intron 25.0%
!!! GTATTTAGTTTCTAGCTTAT+AGG + tig0033043:21910-21929 Msa1450730:intron 25.0%
! ATACTGAAAACCTATTTAGA+AGG + tig0033043:22563-22582 Msa1450730:intron 25.0%
!! TTACATCTATATTTTCTTGC+AGG + tig0033043:22638-22657 Msa1450730:intron 25.0%
!! TTTTATACATCCACTTGAAT+TGG - tig0033043:22814-22833 None:intergenic 25.0%
!! AAAGTGTTACAAATGGTTTA+AGG + tig0033043:22831-22850 Msa1450730:CDS 25.0%
!! ATTTTTCCTGGTATCAAATA+TGG + tig0033043:23140-23159 Msa1450730:three_prime_UTR 25.0%
! TGTAACATACATGGATTTAT+TGG + tig0033043:23422-23441 Msa1450730:three_prime_UTR 25.0%
ATAGTGAGAATTGAAAGGAA+AGG - tig0033043:14669-14688 None:intergenic 30.0%
TGATGAAAGAATTCAGTTAG+AGG + tig0033043:14862-14881 Msa1450730:CDS 30.0%
CTCAAGTTCAACATAAACAT+TGG + tig0033043:15071-15090 Msa1450730:CDS 30.0%
ATTGGAAATAATTCAGGGAA+TGG + tig0033043:15109-15128 Msa1450730:CDS 30.0%
TTGGAAATAATTCAGGGAAT+GGG + tig0033043:15110-15129 Msa1450730:CDS 30.0%
GGGAATTCAATTAGTGATAT+TGG + tig0033043:15130-15149 Msa1450730:CDS 30.0%
!! ATATTGGGTTGATTAGTAGT+GGG + tig0033043:15146-15165 Msa1450730:CDS 30.0%
!!! GATTTTCTAGCTAATAACTC+CGG - tig0033043:15220-15239 None:intergenic 30.0%
ACAAAGATGATATCCAAATC+AGG + tig0033043:15337-15356 Msa1450730:CDS 30.0%
CAAAGATGATATCCAAATCA+GGG + tig0033043:15338-15357 Msa1450730:CDS 30.0%
AATCAGAAACAAATGAAGAC+TGG + tig0033043:15550-15569 Msa1450730:CDS 30.0%
AAACAAATGAAGACTGGTAT+TGG + tig0033043:15556-15575 Msa1450730:CDS 30.0%
! AATCGGAAATTTTGCAATCT+TGG - tig0033043:15620-15639 None:intergenic 30.0%
TTGAGAGAATGGTTAAAATC+TGG + tig0033043:15694-15713 Msa1450730:CDS 30.0%
GGTAGCAATTTAATGTAAGA+TGG - tig0033043:15823-15842 None:intergenic 30.0%
GTTACCTACTCAAAAACAAA+CGG + tig0033043:15867-15886 Msa1450730:CDS 30.0%
!! CTCGTCAAATTTTTGTTTCT+TGG - tig0033043:15944-15963 None:intergenic 30.0%
!! ATGAACAAAGGTATCATGAA+CGG - tig0033043:16268-16287 None:intergenic 30.0%
TACATAGAACTTGTGTAGTA+TGG + tig0033043:16386-16405 Msa1450730:intron 30.0%
! TTTCTAGCATTAGTGTTGTT+TGG + tig0033043:16453-16472 Msa1450730:intron 30.0%
!! TGAAGTTGATTTTTGCCTTT+TGG + tig0033043:16483-16502 Msa1450730:intron 30.0%
AAGTATAGGGAAAAACCAAA+AGG - tig0033043:16501-16520 None:intergenic 30.0%
GAAAGCTAACACTAAGTATA+GGG - tig0033043:16514-16533 None:intergenic 30.0%
AGAAAGCTAACACTAAGTAT+AGG - tig0033043:16515-16534 None:intergenic 30.0%
ATATCTGAATTGGAGTCTTA+CGG - tig0033043:16548-16567 None:intergenic 30.0%
AATGTACGTCATATCTGAAT+TGG - tig0033043:16558-16577 None:intergenic 30.0%
! ATTTTCATTTCTCAGCTACT+AGG + tig0033043:16797-16816 Msa1450730:intron 30.0%
AATATGGCCTGAATTATAAG+TGG + tig0033043:17177-17196 Msa1450730:intron 30.0%
ATATGGCCTGAATTATAAGT+GGG + tig0033043:17178-17197 Msa1450730:intron 30.0%
ACTTCAATAGTCTCCTTAAA+TGG - tig0033043:17220-17239 None:intergenic 30.0%
! AGTCGAAGGAAAATTTTAGA+GGG - tig0033043:17474-17493 None:intergenic 30.0%
! AAGTCGAAGGAAAATTTTAG+AGG - tig0033043:17475-17494 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + tig0033043:17831-17850 Msa1450730:intron 30.0%
AAGTTGAAGGAAAAGTTTAG+AGG + tig0033043:17844-17863 Msa1450730:intron 30.0%
AGTTGAAGGAAAAGTTTAGA+GGG + tig0033043:17845-17864 Msa1450730:intron 30.0%
! TCAGTCTCTGTGAAATATTT+TGG + tig0033043:17986-18005 Msa1450730:intron 30.0%
!!! GTGACAAAAGTTTTAGCTTT+AGG - tig0033043:18114-18133 None:intergenic 30.0%
CATTAATCACTTCAGATTGT+AGG - tig0033043:18150-18169 None:intergenic 30.0%
! CTACAATCTGAAGTGATTAA+TGG + tig0033043:18148-18167 Msa1450730:CDS 30.0%
!! TGAAGTGATTAATGGATTAC+AGG + tig0033043:18156-18175 Msa1450730:CDS 30.0%
TTCATTTGTATTGGAGATTG+GGG - tig0033043:18464-18483 None:intergenic 30.0%
GTTCATTTGTATTGGAGATT+GGG - tig0033043:18465-18484 None:intergenic 30.0%
AGTTCATTTGTATTGGAGAT+TGG - tig0033043:18466-18485 None:intergenic 30.0%
CAATCTCAGTTCATTTGTAT+TGG - tig0033043:18473-18492 None:intergenic 30.0%
AAAAGTAAGCACTTTCAAGA+TGG - tig0033043:18510-18529 None:intergenic 30.0%
TGTTTCAGAAATCTGAACTT+TGG - tig0033043:18542-18561 None:intergenic 30.0%
GTATCTGATTCAAAACGAAA+TGG + tig0033043:19069-19088 Msa1450730:intron 30.0%
AACGAAATGGTTTACTTTAG+AGG + tig0033043:19082-19101 Msa1450730:intron 30.0%
ACGAAATGGTTTACTTTAGA+GGG + tig0033043:19083-19102 Msa1450730:intron 30.0%
AAACTATTCTCTCCATTTAG+GGG - tig0033043:19149-19168 None:intergenic 30.0%
ACATTCCATCATTTGATTAG+TGG + tig0033043:19220-19239 Msa1450730:intron 30.0%
AGCACATTGACATATGATAT+TGG + tig0033043:19252-19271 Msa1450730:intron 30.0%
TCAATATAATATACTCCCTC+CGG + tig0033043:19549-19568 Msa1450730:intron 30.0%
CTGAAATGTCTCTTGTAAAT+AGG - tig0033043:19576-19595 None:intergenic 30.0%
TCAACAAAAGCTAATGTATC+TGG - tig0033043:19635-19654 None:intergenic 30.0%
! TAACTATAAAGTACTACCTC+CGG - tig0033043:19682-19701 None:intergenic 30.0%
CATCATGTACCAGTAAAAAA+TGG + tig0033043:19718-19737 Msa1450730:intron 30.0%
TCATGTACCAGTAAAAAATG+GGG + tig0033043:19720-19739 Msa1450730:intron 30.0%
CATCTTAGAAGAAAAAGAAC+AGG - tig0033043:19811-19830 None:intergenic 30.0%
TTTGTTTGCTTAAATGCAGA+AGG + tig0033043:20004-20023 Msa1450730:intron 30.0%
TTGTTTGCTTAAATGCAGAA+GGG + tig0033043:20005-20024 Msa1450730:intron 30.0%
! AATGATGATTGGTCAAGATA+GGG - tig0033043:20051-20070 None:intergenic 30.0%
! AAATGATGATTGGTCAAGAT+AGG - tig0033043:20052-20071 None:intergenic 30.0%
CTGATTACCAGAATTATTCA+TGG + tig0033043:20120-20139 Msa1450730:intron 30.0%
! TTTCAATGCATTTTCAGCTA+TGG + tig0033043:20151-20170 Msa1450730:intron 30.0%
! TTCAATGCATTTTCAGCTAT+GGG + tig0033043:20152-20171 Msa1450730:intron 30.0%
AATACAGTGAACATGAAAAG+AGG + tig0033043:20202-20221 Msa1450730:CDS 30.0%
ATACAGTGAACATGAAAAGA+GGG + tig0033043:20203-20222 Msa1450730:CDS 30.0%
TCAATAGCCAACAAAAAACT+AGG + tig0033043:20410-20429 Msa1450730:intron 30.0%
CAATAGCCAACAAAAAACTA+GGG + tig0033043:20411-20430 Msa1450730:intron 30.0%
!!! TTGTAACCCTAGTTTTTTGT+TGG - tig0033043:20420-20439 None:intergenic 30.0%
!! GTGTTTTTGATGCATATGAA+CGG - tig0033043:20687-20706 None:intergenic 30.0%
!! TTGGTCTTCTTTTCTTTACA+GGG - tig0033043:20725-20744 None:intergenic 30.0%
!!! ATTGGTCTTCTTTTCTTTAC+AGG - tig0033043:20726-20745 None:intergenic 30.0%
TAAAAAGAAGACGAAAAAGC+TGG + tig0033043:20746-20765 Msa1450730:intron 30.0%
AAATTAGCAAGTTAAGAGAG+TGG + tig0033043:20930-20949 Msa1450730:intron 30.0%
! ATTTTTCTTCCACTCCAATT+TGG - tig0033043:20973-20992 None:intergenic 30.0%
ATTGGAGTGGAAGAAAAATT+AGG + tig0033043:20974-20993 Msa1450730:intron 30.0%
TTGGAGTGGAAGAAAAATTA+GGG + tig0033043:20975-20994 Msa1450730:intron 30.0%
AAAAAATGAATGGAATGGAG+TGG - tig0033043:21039-21058 None:intergenic 30.0%
TAGGGTGAAATGAAATGAAA+TGG - tig0033043:21105-21124 None:intergenic 30.0%
! TGGAAAGACTGAATTTTTCT+CGG - tig0033043:21149-21168 None:intergenic 30.0%
CTGATAATTCATTGAAGATC+TGG + tig0033043:21532-21551 Msa1450730:CDS 30.0%
GACATACTAATGAAAAGGTA+TGG + tig0033043:21616-21635 Msa1450730:intron 30.0%
TTACTTATTTGGGCGTTAAA+TGG + tig0033043:21729-21748 Msa1450730:intron 30.0%
TACTTATTTGGGCGTTAAAT+GGG + tig0033043:21730-21749 Msa1450730:intron 30.0%
TTTGTGATGAACAACTACTT+TGG + tig0033043:21834-21853 Msa1450730:intron 30.0%
!! TTCTAGCTTATAGGTGTTTA+TGG + tig0033043:21919-21938 Msa1450730:intron 30.0%
AACTATCTTGCAATAACCAT+GGG - tig0033043:22042-22061 None:intergenic 30.0%
AAACTATCTTGCAATAACCA+TGG - tig0033043:22043-22062 None:intergenic 30.0%
AGTTCTCGTAAAAAAAGAAC+AGG - tig0033043:22110-22129 None:intergenic 30.0%
!! ATTCAAGTTAGCTCTATATC+TGG + tig0033043:22143-22162 Msa1450730:intron 30.0%
TAATAACACAAACGAAACAC+AGG - tig0033043:22182-22201 None:intergenic 30.0%
TTCTGACCAATGTTTGTTTA+TGG + tig0033043:22202-22221 Msa1450730:intron 30.0%
ATGGTATAGTCCTTCTAAAT+AGG - tig0033043:22576-22595 None:intergenic 30.0%
TATGCAGAAGTCATATTCAT+TGG + tig0033043:22613-22632 Msa1450730:intron 30.0%
ATGCAGAAGTCATATTCATT+GGG + tig0033043:22614-22633 Msa1450730:intron 30.0%
CAAAACTCGAGATGTATAAA+GGG - tig0033043:22938-22957 None:intergenic 30.0%
AATATGACATAATGACAGTG+TGG - tig0033043:23098-23117 None:intergenic 30.0%
! TCTTTTCCATATTTGATACC+AGG - tig0033043:23149-23168 None:intergenic 30.0%
! AACTAAATGCTTCCCTTTTA+TGG - tig0033043:23344-23363 None:intergenic 30.0%
GTAGAGACAAAAAACAAAGA+AGG - tig0033043:23382-23401 None:intergenic 30.0%
!! AAAGTCGGTTTGGAAAGAAA+AGG - tig0033043:14633-14652 None:intergenic 35.0%
TACATGAACAAAAGTCGGTT+TGG - tig0033043:14643-14662 None:intergenic 35.0%
GGACTTACATGAACAAAAGT+CGG - tig0033043:14648-14667 None:intergenic 35.0%
GTCGTAAAATCCCAATATGA+TGG + tig0033043:14923-14942 Msa1450730:CDS 35.0%
TGATGGTAAAAATGTAGCTG+AGG + tig0033043:14940-14959 Msa1450730:CDS 35.0%
TGGCAGAATCTTTATCAGAT+TGG + tig0033043:15091-15110 Msa1450730:CDS 35.0%
!! GATATTGGGTTGATTAGTAG+TGG + tig0033043:15145-15164 Msa1450730:CDS 35.0%
GAGTAATGCAGTTGAACATT+TGG + tig0033043:15255-15274 Msa1450730:CDS 35.0%
TAATGCAGTTGAACATTTGG+CGG + tig0033043:15258-15277 Msa1450730:CDS 35.0%
! TCTGATTTTGCTCTCTAGAT+TGG - tig0033043:15444-15463 None:intergenic 35.0%
TAGAGAGCAAAATCAGACAA+AGG + tig0033043:15447-15466 Msa1450730:CDS 35.0%
AATCAGAATTGGGGTAAGAT+CGG + tig0033043:15484-15503 Msa1450730:CDS 35.0%
! ATTTTGCAATCTTGGAACCA+CGG - tig0033043:15612-15631 None:intergenic 35.0%
TAGGAAAATTGTGGATTTGG+TGG + tig0033043:15756-15775 Msa1450730:CDS 35.0%
TAAATTGCTACCATCAAACC+AGG + tig0033043:15831-15850 Msa1450730:CDS 35.0%
AAAAACAAACGGCAGGTAAA+AGG + tig0033043:15878-15897 Msa1450730:CDS 35.0%
AAAACAAACGGCAGGTAAAA+GGG + tig0033043:15879-15898 Msa1450730:CDS 35.0%
AACATCTTCCTCTGTTGATA+TGG + tig0033043:15915-15934 Msa1450730:CDS 35.0%
ACATCTTCCTCTGTTGATAT+GGG + tig0033043:15916-15935 Msa1450730:CDS 35.0%
TCATGATTATTAGCAGTCTC+AGG - tig0033043:15997-16016 None:intergenic 35.0%
GAAGTTCAAATGCCTTCAAT+TGG + tig0033043:16015-16034 Msa1450730:CDS 35.0%
GTGAAAGATGGGAAAATAAG+TGG + tig0033043:16163-16182 Msa1450730:CDS 35.0%
!! TGAACAAAGGTATCATGAAC+GGG - tig0033043:16267-16286 None:intergenic 35.0%
TATCTGAATTGGAGTCTTAC+GGG - tig0033043:16547-16566 None:intergenic 35.0%
ACGTACATTTCTTAGTAACG+TGG + tig0033043:16569-16588 Msa1450730:intron 35.0%
TCTATACTAAACACCCACAT+GGG - tig0033043:16622-16641 None:intergenic 35.0%
ATCTATACTAAACACCCACA+TGG - tig0033043:16623-16642 None:intergenic 35.0%
CAATGTCTGATCTTCATCAT+AGG + tig0033043:16852-16871 Msa1450730:CDS 35.0%
TTTCCTATCAGAACATCCTA+AGG + tig0033043:16889-16908 Msa1450730:CDS 35.0%
TTTCAATAGTACCCTGTTGT+TGG - tig0033043:16962-16981 None:intergenic 35.0%
ACCCACATTAGATAGCAATA+TGG + tig0033043:17161-17180 Msa1450730:intron 35.0%
GCCATATTGCTATCTAATGT+GGG - tig0033043:17165-17184 None:intergenic 35.0%
TATGGCCTGAATTATAAGTG+GGG + tig0033043:17179-17198 Msa1450730:intron 35.0%
TCCTTAAATGGAAATGTGGA+GGG - tig0033043:17208-17227 None:intergenic 35.0%
AGTCTCCTTAAATGGAAATG+TGG - tig0033043:17212-17231 None:intergenic 35.0%
!!! GTTTTATTTATGCAGACGCA+TGG + tig0033043:17238-17257 Msa1450730:intron 35.0%
TTATAGGGACTAAAAGTCGA+AGG - tig0033043:17488-17507 None:intergenic 35.0%
TCAATAAGGTATGACGTTTG+TGG - tig0033043:18052-18071 None:intergenic 35.0%
ATTACAGGAGTTGTGTAATG+AGG + tig0033043:18171-18190 Msa1450730:CDS 35.0%
! TCTTCTCTTTTGATGAGATG+AGG - tig0033043:18252-18271 None:intergenic 35.0%
TCATCAAAAGAGAAGAAGCA+GGG + tig0033043:18256-18275 Msa1450730:CDS 35.0%
TAATTGTTCAACCAACTTGG+AGG - tig0033043:18287-18306 None:intergenic 35.0%
CTCTAATTGTTCAACCAACT+TGG - tig0033043:18290-18309 None:intergenic 35.0%
CTTGGAATCAGATATAGAAG+AGG + tig0033043:18312-18331 Msa1450730:CDS 35.0%
! AGAGATTTTGCCTCTTCAAA+AGG + tig0033043:18405-18424 Msa1450730:CDS 35.0%
!! CTCAAAACTTCCTTTTGAAG+AGG - tig0033043:18418-18437 None:intergenic 35.0%
AATCTGAACTTTGGATCTCA+TGG - tig0033043:18533-18552 None:intergenic 35.0%
! AGAGAGCATATAACATTTGC+AGG - tig0033043:18751-18770 None:intergenic 35.0%
AAGCAAAGTAATCTTCATCC+CGG - tig0033043:18783-18802 None:intergenic 35.0%
AAGATTACTTTGCTTCTGCT+GGG + tig0033043:18788-18807 Msa1450730:CDS 35.0%
GTATCCCTTAGTGATATATG+TGG + tig0033043:19039-19058 Msa1450730:intron 35.0%
GTTATAACATTGCCCCTAAA+TGG + tig0033043:19134-19153 Msa1450730:intron 35.0%
! TTAATTTTCTCAAGAGTGGC+TGG + tig0033043:19168-19187 Msa1450730:intron 35.0%
ACTTGCCACTAATCAAATGA+TGG - tig0033043:19228-19247 None:intergenic 35.0%
ATGTCTCTTGTAAATAGGAC+CGG - tig0033043:19571-19590 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + tig0033043:19663-19682 Msa1450730:intron 35.0%
!!! TAGAAGTCCCCATTTTTTAC+TGG - tig0033043:19730-19749 None:intergenic 35.0%
AAAGAGTAGATTAACCGTCT+AGG + tig0033043:19777-19796 Msa1450730:intron 35.0%
TATTGTACCAACATCGTACA+TGG + tig0033043:19868-19887 Msa1450730:intron 35.0%
ATGTATTCCATGTACGATGT+TGG - tig0033043:19878-19897 None:intergenic 35.0%
! TTCCACTGGCAAATTTTGTA+GGG - tig0033043:20257-20276 None:intergenic 35.0%
!!! TTGGCTATTGATTTTCTGTG+AGG - tig0033043:20401-20420 None:intergenic 35.0%
!! TAATCTGCTTTTGATAGCAG+TGG - tig0033043:20500-20519 None:intergenic 35.0%
CTGCTATCAAAAGCAGATTA+TGG + tig0033043:20500-20519 Msa1450730:intron 35.0%
CTATCAAAAGCAGATTATGG+TGG + tig0033043:20503-20522 Msa1450730:intron 35.0%
!!! TTATATGGCGATTTTTTGGC+TGG - tig0033043:20529-20548 None:intergenic 35.0%
CTGTCTGTTGTGGATATAAT+AGG + tig0033043:20560-20579 Msa1450730:intron 35.0%
! TTTTTGATGCATATGAACGG+TGG - tig0033043:20684-20703 None:intergenic 35.0%
! TCCTAATAGCCCCTTTTATT+GGG - tig0033043:20775-20794 None:intergenic 35.0%
! TTCCTAATAGCCCCTTTTAT+TGG - tig0033043:20776-20795 None:intergenic 35.0%
TCGAGAGCTATAATTTCATG+AGG + tig0033043:20867-20886 Msa1450730:intron 35.0%
AAAGTGGTTGTTGTACAGTA+TGG + tig0033043:20899-20918 Msa1450730:intron 35.0%
! CCAATTTGGAGTATATAGGA+TGG - tig0033043:20959-20978 None:intergenic 35.0%
CCATCCTATATACTCCAAAT+TGG + tig0033043:20956-20975 Msa1450730:intron 35.0%
! CACTCCAATTTGGAGTATAT+AGG - tig0033043:20963-20982 None:intergenic 35.0%
CTATATACTCCAAATTGGAG+TGG + tig0033043:20961-20980 Msa1450730:intron 35.0%
TGGAAGAAAAATTAGGGAAG+AGG + tig0033043:20981-21000 Msa1450730:intron 35.0%
AAGAAAAATTAGGGAAGAGG+AGG + tig0033043:20984-21003 Msa1450730:intron 35.0%
TGAAATGAAATGGAATGGAG+TGG - tig0033043:21095-21114 None:intergenic 35.0%
! GGAAAGACTGAATTTTTCTC+GGG - tig0033043:21148-21167 None:intergenic 35.0%
! GCACTATATTAGCTCTTCAA+TGG - tig0033043:21282-21301 None:intergenic 35.0%
GGATCTCAATAAAACCTCTT+CGG + tig0033043:21554-21573 Msa1450730:CDS 35.0%
TTCATTAGTATGTCCAGACA+GGG - tig0033043:21610-21629 None:intergenic 35.0%
TTTCATTAGTATGTCCAGAC+AGG - tig0033043:21611-21630 None:intergenic 35.0%
GTCTGGACATACTAATGAAA+AGG + tig0033043:21611-21630 Msa1450730:CDS 35.0%
TTATGTTTGTGGAACCTGTA+AGG + tig0033043:21667-21686 Msa1450730:intron 35.0%
ACTTATTTGGGCGTTAAATG+GGG + tig0033043:21731-21750 Msa1450730:intron 35.0%
! TTTGACTAGCCATTCAGATA+AGG - tig0033043:21770-21789 None:intergenic 35.0%
! ACAACTACTTTGGTTCAGTT+TGG + tig0033043:21844-21863 Msa1450730:intron 35.0%
! ACTTTGGTTCAGTTTGGAAT+TGG + tig0033043:21850-21869 Msa1450730:intron 35.0%
TTGCAATAACCATGGGTAAT+AGG - tig0033043:22035-22054 None:intergenic 35.0%
! TCGCTTTGACAGAATTTTGT+GGG + tig0033043:22258-22277 Msa1450730:intron 35.0%
ATCATCACAAAATTACCGCA+TGG - tig0033043:22485-22504 None:intergenic 35.0%
ATGACTTCTGCATAAAACTC+AGG - tig0033043:22607-22626 None:intergenic 35.0%
TTGTGTGAAGTAATTGGCAT+GGG - tig0033043:22687-22706 None:intergenic 35.0%
CCAAACTTGTGTGAAGTAAT+TGG - tig0033043:22693-22712 None:intergenic 35.0%
CCAATTACTTCACACAAGTT+TGG + tig0033043:22690-22709 Msa1450730:CDS 35.0%
CCAAAACTCGAGATGTATAA+AGG - tig0033043:22939-22958 None:intergenic 35.0%
! CCTTTATACATCTCGAGTTT+TGG + tig0033043:22936-22955 Msa1450730:three_prime_UTR 35.0%
CATTCTCCACAATACTTGAA+TGG + tig0033043:22983-23002 Msa1450730:three_prime_UTR 35.0%
! ATTGCTCCATTCAAGTATTG+TGG - tig0033043:22992-23011 None:intergenic 35.0%
ATAATGACAGTGTGGAATTC+TGG - tig0033043:23090-23109 None:intergenic 35.0%
AGCCTATGGAAATTGTATTG+TGG + tig0033043:23224-23243 Msa1450730:three_prime_UTR 35.0%
GACCACAATACAATTTCCAT+AGG - tig0033043:23229-23248 None:intergenic 35.0%
!! ACTAGCAATTGCAGTTTTGT+AGG + tig0033043:23278-23297 Msa1450730:three_prime_UTR 35.0%
! TAAATGCTTCCCTTTTATGG+TGG - tig0033043:23341-23360 None:intergenic 35.0%
GAGACAAAAAACAAAGAAGG+AGG - tig0033043:23379-23398 None:intergenic 35.0%
!! TCGGTTTGGAAAGAAAAGGT+TGG - tig0033043:14629-14648 None:intergenic 40.0%
AATTCAGTTAGAGGCTGTTG+AGG + tig0033043:14871-14890 Msa1450730:CDS 40.0%
GCTAGAAAATCGCATAGTGA+TGG + tig0033043:15229-15248 Msa1450730:CDS 40.0%
GTGATGTTCATCGAGGAATA+CGG + tig0033043:15314-15333 Msa1450730:CDS 40.0%
ATACTCAGCAAACCCTGATT+TGG - tig0033043:15353-15372 None:intergenic 40.0%
!! AGTAAGGGTGTTGTACGTAA+AGG + tig0033043:15394-15413 Msa1450730:CDS 40.0%
TCTAATGTTTCAGTGAACCG+TGG + tig0033043:15592-15611 Msa1450730:CDS 40.0%
CATTCAGTCGTGCTAGATTT+AGG - tig0033043:15661-15680 None:intergenic 40.0%
ACGGTGTAACATTGAGAGAA+TGG + tig0033043:15683-15702 Msa1450730:CDS 40.0%
! ATGTACATGACCTGGTTTGA+TGG - tig0033043:15844-15863 None:intergenic 40.0%
TCAAACCAGGTCATGTACAT+TGG + tig0033043:15844-15863 Msa1450730:CDS 40.0%
CAAACCAGGTCATGTACATT+GGG + tig0033043:15845-15864 Msa1450730:CDS 40.0%
! AGAGGAAGATGTTACTTGCT+CGG - tig0033043:15908-15927 None:intergenic 40.0%
CATCTTCCTCTGTTGATATG+GGG + tig0033043:15917-15936 Msa1450730:CDS 40.0%
! AAAAATTTGACGAGAGTGCG+AGG + tig0033043:15950-15969 Msa1450730:CDS 40.0%
! AAAATTTGACGAGAGTGCGA+GGG + tig0033043:15951-15970 Msa1450730:CDS 40.0%
ATCCCTCGTGTATCTAATTC+AGG + tig0033043:16111-16130 Msa1450730:CDS 40.0%
GACCTGAATTAGATACACGA+GGG - tig0033043:16116-16135 None:intergenic 40.0%
TGACCTGAATTAGATACACG+AGG - tig0033043:16117-16136 None:intergenic 40.0%
TCATCAAACATCTACTGCCT+CGG + tig0033043:16216-16235 Msa1450730:CDS 40.0%
ATCTGAATTGGAGTCTTACG+GGG - tig0033043:16546-16565 None:intergenic 40.0%
CTTCTAATCAACCTGAAACG+AGG - tig0033043:16598-16617 None:intergenic 40.0%
GTTGATTAGAAGTCCCATGT+GGG + tig0033043:16606-16625 Msa1450730:intron 40.0%
TTGTTCTCAGTCATTCTCAC+TGG + tig0033043:16740-16759 Msa1450730:intron 40.0%
CTTCCTTAGGATGTTCTGAT+AGG - tig0033043:16895-16914 None:intergenic 40.0%
AGACAAAATCCAGCTTCCTT+AGG - tig0033043:16908-16927 None:intergenic 40.0%
GGCCATATTGCTATCTAATG+TGG - tig0033043:17166-17185 None:intergenic 40.0%
ACCCTCCACATTTCCATTTA+AGG + tig0033043:17204-17223 Msa1450730:intron 40.0%
CTCCTTAAATGGAAATGTGG+AGG - tig0033043:17209-17228 None:intergenic 40.0%
AGACCAAGAAGATGCAGAAT+CGG + tig0033043:18210-18229 Msa1450730:CDS 40.0%
ATTCCGATTCTGCATCTTCT+TGG - tig0033043:18216-18235 None:intergenic 40.0%
CTCATCAAAAGAGAAGAAGC+AGG + tig0033043:18255-18274 Msa1450730:CDS 40.0%
! GGTTGAACAATTAGAGTGCT+TGG + tig0033043:18294-18313 Msa1450730:CDS 40.0%
GCATGGCTTAAGAAAATCCT+TGG + tig0033043:18345-18364 Msa1450730:CDS 40.0%
AGAAAATCCTTGGTTTCCTC+TGG + tig0033043:18355-18374 Msa1450730:CDS 40.0%
ATCTTTATCTGGGTGATCTG+TGG - tig0033043:18569-18588 None:intergenic 40.0%
TACTAAGAACTCGCGAGAAT+TGG + tig0033043:18590-18609 Msa1450730:CDS 40.0%
! AATTGGTCTGTGACCCAAAA+AGG + tig0033043:18607-18626 Msa1450730:CDS 40.0%
!! GCTTTAGGAACCTTCTTTGA+TGG + tig0033043:18655-18674 Msa1450730:CDS 40.0%
CTTGCACAAACCATCAAAGA+AGG - tig0033043:18668-18687 None:intergenic 40.0%
GTTACAACAAGCTTGAAGTG+CGG + tig0033043:18695-18714 Msa1450730:CDS 40.0%
TTACAACAAGCTTGAAGTGC+GGG + tig0033043:18696-18715 Msa1450730:CDS 40.0%
! TATGCTCTCTAAGCTTTGAC+CGG + tig0033043:18761-18780 Msa1450730:CDS 40.0%
GAAGATTACTTTGCTTCTGC+TGG + tig0033043:18787-18806 Msa1450730:CDS 40.0%
ACATCTCAACAGCAGGATAA+TGG - tig0033043:18873-18892 None:intergenic 40.0%
CTTTCTCTTGTCTGTTTGAG+TGG + tig0033043:19333-19352 Msa1450730:intron 40.0%
!! GTACTCTGAAACAGTCGTAT+TGG + tig0033043:19382-19401 Msa1450730:intron 40.0%
! GAAACAGTCGTATTGGTACT+AGG + tig0033043:19389-19408 Msa1450730:intron 40.0%
AACAGGACTTTCAACCTAGA+CGG - tig0033043:19794-19813 None:intergenic 40.0%
TGTGCTTCCTACATTGTTGT+AGG + tig0033043:19918-19937 Msa1450730:intron 40.0%
! GCAAATTTTGTAGGGCATAC+TGG - tig0033043:20249-20268 None:intergenic 40.0%
! CTTCCACTGGCAAATTTTGT+AGG - tig0033043:20258-20277 None:intergenic 40.0%
AGTACAATCATCACTTCCAC+TGG - tig0033043:20271-20290 None:intergenic 40.0%
ATGATTGTACTGTCAAGCTG+TGG + tig0033043:20280-20299 Msa1450730:CDS 40.0%
ACAGCTGGGTCATGTTTATA+TGG - tig0033043:20544-20563 None:intergenic 40.0%
TATATCCACAACAGACAGCT+GGG - tig0033043:20558-20577 None:intergenic 40.0%
TTATATCCACAACAGACAGC+TGG - tig0033043:20559-20578 None:intergenic 40.0%
! TATAATAGGTGTTGTGCCTC+TGG + tig0033043:20574-20593 Msa1450730:intron 40.0%
AAAGCTGGCAACCCAATAAA+AGG + tig0033043:20761-20780 Msa1450730:intron 40.0%
AAGCTGGCAACCCAATAAAA+GGG + tig0033043:20762-20781 Msa1450730:intron 40.0%
ACCCAATAAAAGGGGCTATT+AGG + tig0033043:20771-20790 Msa1450730:intron 40.0%
CATGAGGCAGTAGATAAAAG+TGG + tig0033043:20883-20902 Msa1450730:intron 40.0%
AATTAGGGAAGAGGAGGAAA+TGG + tig0033043:20990-21009 Msa1450730:intron 40.0%
ATTAGGGAAGAGGAGGAAAT+GGG + tig0033043:20991-21010 Msa1450730:intron 40.0%
GGAATGGAGTGGTATATGAT+GGG - tig0033043:21028-21047 None:intergenic 40.0%
TGGAATGGAGTGGTATATGA+TGG - tig0033043:21029-21048 None:intergenic 40.0%
TGAAATGGAATGGAGTGGTA+TGG - tig0033043:21090-21109 None:intergenic 40.0%
AATATCTGTCACTCTGCTGA+TGG - tig0033043:21169-21188 None:intergenic 40.0%
GCAGAGTGACAGATATTGAA+TGG + tig0033043:21172-21191 Msa1450730:intron 40.0%
GAAATTCTTTGGGCACAATC+AGG + tig0033043:21316-21335 Msa1450730:CDS 40.0%
TGAGTAATTCGCAGATCCAA+AGG - tig0033043:21397-21416 None:intergenic 40.0%
CATAGCTTACAGCTTTACGA+TGG - tig0033043:21473-21492 None:intergenic 40.0%
CTCAATAAAACCTCTTCGGT+TGG + tig0033043:21558-21577 Msa1450730:CDS 40.0%
GTAATAGGCATGAGCATTCT+AGG - tig0033043:22020-22039 None:intergenic 40.0%
AAAATTCTGTCAAAGCGAGG+TGG - tig0033043:22256-22275 None:intergenic 40.0%
CACAAAATTCTGTCAAAGCG+AGG - tig0033043:22259-22278 None:intergenic 40.0%
! CTCGCTTTGACAGAATTTTG+TGG + tig0033043:22257-22276 Msa1450730:intron 40.0%
! GCTGATGGATATATTGCATG+CGG + tig0033043:22291-22310 Msa1450730:CDS 40.0%
TCACAAAATTACCGCATGGT+AGG - tig0033043:22481-22500 None:intergenic 40.0%
GAAGGACTATACCATGATGA+AGG + tig0033043:22581-22600 Msa1450730:intron 40.0%
TAAAACTCAGGCCTTCATCA+TGG - tig0033043:22595-22614 None:intergenic 40.0%
CTTGTGTGAAGTAATTGGCA+TGG - tig0033043:22688-22707 None:intergenic 40.0%
TCAGTCTCTTTACCAGAGAT+GGG - tig0033043:22726-22745 None:intergenic 40.0%
ATCAGTCTCTTTACCAGAGA+TGG - tig0033043:22727-22746 None:intergenic 40.0%
! AAAGAGACTGATGATGACCA+TGG + tig0033043:22735-22754 Msa1450730:CDS 40.0%
CACTTGAAACAAACTGACCA+TGG - tig0033043:22755-22774 None:intergenic 40.0%
! AGTTTGTTTCAAGTGTGTGC+TGG + tig0033043:22760-22779 Msa1450730:CDS 40.0%
ACAATCCCCAGCAAATTGAT+TGG - tig0033043:22909-22928 None:intergenic 40.0%
GCTTAAGATTTGACGCAGAA+AGG + tig0033043:22958-22977 Msa1450730:three_prime_UTR 40.0%
AATCCCGATCTTCTTGAAGT+CGG + tig0033043:23026-23045 Msa1450730:three_prime_UTR 40.0%
AATCCGACTTCAAGAAGATC+GGG - tig0033043:23032-23051 None:intergenic 40.0%
GAATCCGACTTCAAGAAGAT+CGG - tig0033043:23033-23052 None:intergenic 40.0%
AATAGCTTCGCCACCATAAA+AGG + tig0033043:23328-23347 Msa1450730:three_prime_UTR 40.0%
ATAGCTTCGCCACCATAAAA+GGG + tig0033043:23329-23348 Msa1450730:three_prime_UTR 40.0%
TAATAACTCCGGAAACGAGG+TGG - tig0033043:15209-15228 None:intergenic 45.0%
AGCTAATAACTCCGGAAACG+AGG - tig0033043:15212-15231 None:intergenic 45.0%
ACATAAACGCGATCAGAAGC+TGG - tig0033043:15421-15440 None:intergenic 45.0%
GAGCAAAATCAGACAAAGGC+AGG + tig0033043:15451-15470 Msa1450730:CDS 45.0%
CAAAATCAGACAAAGGCAGG+CGG + tig0033043:15454-15473 Msa1450730:CDS 45.0%
CGGTGATGCGAATCAGAATT+GGG + tig0033043:15474-15493 Msa1450730:CDS 45.0%
GGTGATGCGAATCAGAATTG+GGG + tig0033043:15475-15494 Msa1450730:CDS 45.0%
TCTAGCACGACTGAATGTGA+CGG + tig0033043:15664-15683 Msa1450730:CDS 45.0%
GTAACCCAATGTACATGACC+TGG - tig0033043:15852-15871 None:intergenic 45.0%
!!! CCTGCCGTTTGTTTTTGAGT+AGG - tig0033043:15874-15893 None:intergenic 45.0%
CCTACTCAAAAACAAACGGC+AGG + tig0033043:15871-15890 Msa1450730:CDS 45.0%
GGTTGATTAGAAGTCCCATG+TGG + tig0033043:16605-16624 Msa1450730:intron 45.0%
TGTTCTGATAGGAAAGCTGG+AGG - tig0033043:16884-16903 None:intergenic 45.0%
GGATGTTCTGATAGGAAAGC+TGG - tig0033043:16887-16906 None:intergenic 45.0%
TCAGAACATCCTAAGGAAGC+TGG + tig0033043:16896-16915 Msa1450730:CDS 45.0%
! AGGAAGCTGGATTTTGTCTC+TGG + tig0033043:16909-16928 Msa1450730:CDS 45.0%
CATCATCACGTCCAACAACA+GGG + tig0033043:16948-16967 Msa1450730:CDS 45.0%
GGGTCACTCAACAATACCTA+TGG - tig0033043:17145-17164 None:intergenic 45.0%
GGTTGCCCCACTTATAATTC+AGG - tig0033043:17187-17206 None:intergenic 45.0%
CAGATATAGAAGAGGCAGAG+AGG + tig0033043:18320-18339 Msa1450730:CDS 45.0%
ATATAGAAGAGGCAGAGAGG+AGG + tig0033043:18323-18342 Msa1450730:CDS 45.0%
TACAACAAGCTTGAAGTGCG+GGG + tig0033043:18697-18716 Msa1450730:CDS 45.0%
! ATGCTCTCTAAGCTTTGACC+GGG + tig0033043:18762-18781 Msa1450730:CDS 45.0%
CTGTTTGACATCTCAACAGC+AGG - tig0033043:18880-18899 None:intergenic 45.0%
CAAAGCTTAGCTGTGTTTGC+TGG + tig0033043:18902-18921 Msa1450730:CDS 45.0%
GAATGTGATGTTAGCATGCG+AGG - tig0033043:19206-19225 None:intergenic 45.0%
GGTAACAATCATGTTGCTCG+TGG + tig0033043:19523-19542 Msa1450730:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - tig0033043:19567-19586 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG - tig0033043:19568-19587 None:intergenic 45.0%
AATCATGCCACGCACAATCT+TGG - tig0033043:19948-19967 None:intergenic 45.0%
!! CAGAAGGGCATTAGTTCACA+TGG + tig0033043:20020-20039 Msa1450730:intron 45.0%
TCAGCTATGGGATGCTAGTA+CGG + tig0033043:20164-20183 Msa1450730:intron 45.0%
GTGAACATGAAAAGAGGGCT+TGG + tig0033043:20208-20227 Msa1450730:CDS 45.0%
TGCCCTACAAAATTTGCCAG+TGG + tig0033043:20252-20271 Msa1450730:CDS 45.0%
AGCTGGCAACCCAATAAAAG+GGG + tig0033043:20763-20782 Msa1450730:intron 45.0%
GAACATGCAAGTTTGAGCGT+TGG + tig0033043:20834-20853 Msa1450730:intron 45.0%
!! TGCAAGTTTGAGCGTTGGAT+AGG + tig0033043:20839-20858 Msa1450730:intron 45.0%
TGGCAGTAGTTTGAGCTGAA+CGG - tig0033043:21231-21250 None:intergenic 45.0%
TCCTCTCATTTGCTTGCCTT+TGG + tig0033043:21378-21397 Msa1450730:CDS 45.0%
TCCAAAGGCAAGCAAATGAG+AGG - tig0033043:21382-21401 None:intergenic 45.0%
TTCGCAATCTTAGAAGTCCC+TGG + tig0033043:21433-21452 Msa1450730:CDS 45.0%
TAGAAGTCCCTGGTGTGTAT+TGG + tig0033043:21443-21462 Msa1450730:CDS 45.0%
TAGTATGTCCAGACAGGGTT+AGG - tig0033043:21605-21624 None:intergenic 45.0%
CTCTGACAGACAAACCTTAC+AGG - tig0033043:21684-21703 None:intergenic 45.0%
TTATGAAGTGTGCACGCGTT+CGG + tig0033043:21791-21810 Msa1450730:intron 45.0%
ATGCTCATGCCTATTACCCA+TGG + tig0033043:22023-22042 Msa1450730:intron 45.0%
ATGCGGTTCAGAATCAAACG+AGG + tig0033043:22308-22327 Msa1450730:CDS 45.0%
AGTTCGCAAATCCTACCATG+CGG + tig0033043:22467-22486 Msa1450730:intron 45.0%
CATGGGAAGCGACTTATAGT+AGG - tig0033043:22670-22689 None:intergenic 45.0%
GGATCTATTGATCCCATCTC+TGG + tig0033043:22711-22730 Msa1450730:CDS 45.0%
! TTTCAAGTGTGTGCTGGAGA+GGG + tig0033043:22766-22785 Msa1450730:CDS 45.0%
CTTCTTGCTGCCAATTCAAG+TGG + tig0033043:22801-22820 Msa1450730:CDS 45.0%
! GGAAAGTTTTCCCTTGACGA+TGG + tig0033043:22852-22871 Msa1450730:three_prime_UTR 45.0%
AGTGACCAGGGCAAAAATGT+AGG - tig0033043:22882-22901 None:intergenic 45.0%
! ACATTTTTGCCCTGGTCACT+CGG + tig0033043:22882-22901 Msa1450730:three_prime_UTR 45.0%
CATCGCAATGAGCATAAGCA+AGG + tig0033043:23052-23071 Msa1450730:three_prime_UTR 45.0%
CTCAAAGTCTGCTAAGTGCT+TGG + tig0033043:23198-23217 Msa1450730:three_prime_UTR 45.0%
!! CAAAAATTAAATTAAAAATA+GGG - tig0033043:17534-17553 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - tig0033043:17535-17554 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+AGG - tig0033043:17608-17627 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG - tig0033043:17661-17680 None:intergenic 5.0%
TCTAGTGCTTGGGAGGATGT+TGG + tig0033043:15181-15200 Msa1450730:CDS 50.0%
TGTTGGATCCACCTCGTTTC+CGG + tig0033043:15198-15217 Msa1450730:CDS 50.0%
AGTTGAACATTTGGCGGCTG+CGG + tig0033043:15264-15283 Msa1450730:CDS 50.0%
TCCTCGATGAACATCACCTG+CGG - tig0033043:15311-15330 None:intergenic 50.0%
GCGGTGATGCGAATCAGAAT+TGG + tig0033043:15473-15492 Msa1450730:CDS 50.0%
AATTGGGGTAAGATCGGCGT+TGG + tig0033043:15490-15509 Msa1450730:CDS 50.0%
ACTGCAGCATCGCTGTGAAT+CGG - tig0033043:15637-15656 None:intergenic 50.0%
AAATCTGGCCAGCGCAAATC+AGG + tig0033043:15709-15728 Msa1450730:CDS 50.0%
! TGGTGGATGACTCACACTCT+CGG + tig0033043:15773-15792 Msa1450730:CDS 50.0%
CTTGGACCCCATATCAACAG+AGG - tig0033043:15926-15945 None:intergenic 50.0%
TAAGTGGTATGCGAGTCCTG+AGG + tig0033043:16179-16198 Msa1450730:CDS 50.0%
AAGTGGTATGCGAGTCCTGA+GGG + tig0033043:16180-16199 Msa1450730:CDS 50.0%
GATATTGTGCAACCTCCCTC+AGG - tig0033043:16198-16217 None:intergenic 50.0%
GTCTACACACCTCGAAAAGG+AGG - tig0033043:16245-16264 None:intergenic 50.0%
TGAATTGGAGTCTTACGGGG+AGG - tig0033043:16543-16562 None:intergenic 50.0%
!! GTTGGACGTGATGATGGTTC+AGG - tig0033043:16944-16963 None:intergenic 50.0%
CCTGTTGTTGGACGTGATGA+TGG - tig0033043:16950-16969 None:intergenic 50.0%
CCATCATCACGTCCAACAAC+AGG + tig0033043:16947-16966 Msa1450730:CDS 50.0%
ATCATGGCATGCCCTTACGT+TGG + tig0033043:17116-17135 Msa1450730:intron 50.0%
ACCTATGGCCACCAACGTAA+GGG - tig0033043:17130-17149 None:intergenic 50.0%
TACCTATGGCCACCAACGTA+AGG - tig0033043:17131-17150 None:intergenic 50.0%
AATCCTTGGTTTCCTCTGGC+TGG + tig0033043:18359-18378 Msa1450730:CDS 50.0%
GTAATTGTTCTGCCAGCCAG+AGG - tig0033043:18374-18393 None:intergenic 50.0%
TTGGAGATTGGGGACACTGT+GGG - tig0033043:18454-18473 None:intergenic 50.0%
ATTGGAGATTGGGGACACTG+TGG - tig0033043:18455-18474 None:intergenic 50.0%
TGGTCTGTGACCCAAAAAGG+TGG + tig0033043:18610-18629 Msa1450730:CDS 50.0%
GGTCTGTGACCCAAAAAGGT+GGG + tig0033043:18611-18630 Msa1450730:CDS 50.0%
GTCTGTGACCCAAAAAGGTG+GGG + tig0033043:18612-18631 Msa1450730:CDS 50.0%
! ATGCTGCTCCCCACCTTTTT+GGG - tig0033043:18623-18642 None:intergenic 50.0%
! TATGCTGCTCCCCACCTTTT+TGG - tig0033043:18624-18643 None:intergenic 50.0%
CTTGCCTCTACAGACTACGA+CGG + tig0033043:18946-18965 Msa1450730:CDS 50.0%
TACACCGTCGTAGTCTGTAG+AGG - tig0033043:18953-18972 None:intergenic 50.0%
AGACTACGACGGTGTAGTGA+AGG + tig0033043:18957-18976 Msa1450730:CDS 50.0%
!! TGGCTGGCCTACAACAATGT+AGG - tig0033043:19928-19947 None:intergenic 50.0%
CAGCTATGGGATGCTAGTAC+GGG + tig0033043:20165-20184 Msa1450730:intron 50.0%
GTGCATCAGTGCATGGGAAA+GGG - tig0033043:20323-20342 None:intergenic 50.0%
AAATCCGCCATGCCATAGTG+CGG + tig0033043:20608-20627 Msa1450730:intron 50.0%
TTTCATCCACCACCGCACTA+TGG - tig0033043:20623-20642 None:intergenic 50.0%
!! GTTTGAGCGTTGGATAGGCA+AGG + tig0033043:20844-20863 Msa1450730:intron 50.0%
GAGGAGGAAATGGGATGGAA+TGG + tig0033043:21000-21019 Msa1450730:intron 50.0%
AGTGGATGAACCAACCGAAG+AGG - tig0033043:21571-21590 None:intergenic 50.0%
ATTCTGTCAAAGCGAGGTGG+AGG - tig0033043:22253-22272 None:intergenic 50.0%
GTGGGTTTGTCTGTTGCTGA+TGG + tig0033043:22276-22295 Msa1450730:CDS 50.0%
! GTTTCAAGTGTGTGCTGGAG+AGG + tig0033043:22765-22784 Msa1450730:CDS 50.0%
TGTAGGAGAGCCATCGTCAA+GGG - tig0033043:22865-22884 None:intergenic 50.0%
ATGTAGGAGAGCCATCGTCA+AGG - tig0033043:22866-22885 None:intergenic 50.0%
! GCTCTCCTACATTTTTGCCC+TGG + tig0033043:22874-22893 Msa1450730:three_prime_UTR 50.0%
! CATTTTTGCCCTGGTCACTC+GGG + tig0033043:22883-22902 Msa1450730:three_prime_UTR 50.0%
ACTCGGGCCAATCAATTTGC+TGG + tig0033043:22899-22918 Msa1450730:three_prime_UTR 50.0%
! CTCGGGCCAATCAATTTGCT+GGG + tig0033043:22900-22919 Msa1450730:three_prime_UTR 50.0%
!! TCGGGCCAATCAATTTGCTG+GGG + tig0033043:22901-22920 Msa1450730:three_prime_UTR 50.0%
TAAGTGCTTGGCTGAGCCTA+TGG + tig0033043:23210-23229 Msa1450730:three_prime_UTR 50.0%
CAAGCACTAGACGTAGCTGC+GGG - tig0033043:15172-15191 None:intergenic 55.0%
CCAAGCACTAGACGTAGCTG+CGG - tig0033043:15173-15192 None:intergenic 55.0%
CGCAGCTACGTCTAGTGCTT+GGG + tig0033043:15171-15190 Msa1450730:CDS 55.0%
AGCTACGTCTAGTGCTTGGG+AGG + tig0033043:15174-15193 Msa1450730:CDS 55.0%
TTTGGCGGCTGCGGAAAGTA+AGG + tig0033043:15273-15292 Msa1450730:CDS 55.0%
! GCGGAAAGTAAGGAGGGTGT+AGG + tig0033043:15283-15302 Msa1450730:CDS 55.0%
CCTCGATGAACATCACCTGC+GGG - tig0033043:15310-15329 None:intergenic 55.0%
! CCACTTTGCCTGATTTGCGC+TGG - tig0033043:15720-15739 None:intergenic 55.0%
CCAGCGCAAATCAGGCAAAG+TGG + tig0033043:15717-15736 Msa1450730:CDS 55.0%
GGTGGATGACTCACACTCTC+GGG + tig0033043:15774-15793 Msa1450730:CDS 55.0%
GTGGATGACTCACACTCTCG+GGG + tig0033043:15775-15794 Msa1450730:CDS 55.0%
! ACGAGAGTGCGAGGGTTACT+GGG + tig0033043:15959-15978 Msa1450730:CDS 55.0%
CGGGTCTACACACCTCGAAA+AGG - tig0033043:16248-16267 None:intergenic 55.0%
TAACGTGGCTGCCTCGTTTC+AGG + tig0033043:16584-16603 Msa1450730:intron 55.0%
ATGGCATGCCCTTACGTTGG+TGG + tig0033043:17119-17138 Msa1450730:intron 55.0%
ATGCCACGCACAATCTTGGC+TGG - tig0033043:19944-19963 None:intergenic 55.0%
! CAAGCTGTGGAGCATCAGTG+AGG + tig0033043:20293-20312 Msa1450730:CDS 55.0%
CGTGCATCAGTGCATGGGAA+AGG - tig0033043:20324-20343 None:intergenic 55.0%
ACGTGCGTGCATCAGTGCAT+GGG - tig0033043:20329-20348 None:intergenic 55.0%
TACGTGCGTGCATCAGTGCA+TGG - tig0033043:20330-20349 None:intergenic 55.0%
TGCACGCACGTACTCACACA+CGG + tig0033043:20338-20357 Msa1450730:intron 55.0%
CATGACCCAGCTGTCTGTTG+TGG + tig0033043:20550-20569 Msa1450730:intron 55.0%
GGGAAGAGGAGGAAATGGGA+TGG + tig0033043:20995-21014 Msa1450730:intron 55.0%
! AGTCCCTGGTGTGTATTGGC+TGG + tig0033043:21447-21466 Msa1450730:CDS 55.0%
TGGCCAGCCAATACACACCA+GGG - tig0033043:21453-21472 None:intergenic 55.0%
ATGGCCAGCCAATACACACC+AGG - tig0033043:21454-21473 None:intergenic 55.0%
! TTGATTGGCCCGAGTGACCA+GGG - tig0033043:22894-22913 None:intergenic 55.0%
! ATTGATTGGCCCGAGTGACC+AGG - tig0033043:22895-22914 None:intergenic 55.0%
CCGCAGCTACGTCTAGTGCT+TGG + tig0033043:15170-15189 Msa1450730:CDS 60.0%
GCGGCTGCGGAAAGTAAGGA+GGG + tig0033043:15277-15296 Msa1450730:CDS 60.0%
CCCGCAGGTGATGTTCATCG+AGG + tig0033043:15307-15326 Msa1450730:CDS 60.0%
! GACGAGAGTGCGAGGGTTAC+TGG + tig0033043:15958-15977 Msa1450730:CDS 60.0%
TGGTATGCGAGTCCTGAGGG+AGG + tig0033043:16183-16202 Msa1450730:CDS 60.0%
CCTCGAAAAGGAGGACACCG+AGG - tig0033043:16236-16255 None:intergenic 60.0%
!!! CCTCGGTGTCCTCCTTTTCG+AGG + tig0033043:16233-16252 Msa1450730:CDS 60.0%
!! GCCCTTACGTTGGTGGCCAT+AGG + tig0033043:17126-17145 Msa1450730:intron 60.0%
GCAGGGTGATGCCTCCAAGT+TGG + tig0033043:18273-18292 Msa1450730:CDS 60.0%
GAAGAGGCAGAGAGGAGGCA+TGG + tig0033043:18328-18347 Msa1450730:CDS 60.0%
CTGCCAGCCAGAGGAAACCA+AGG - tig0033043:18365-18384 None:intergenic 60.0%
GAGATTGGGGACACTGTGGG+CGG - tig0033043:18451-18470 None:intergenic 60.0%
AGGCCAGCCAAGATTGTGCG+TGG + tig0033043:19938-19957 Msa1450730:intron 60.0%
GCACGCACGTACTCACACAC+GGG + tig0033043:20339-20358 Msa1450730:intron 60.0%
! AGGTGTTGTGCCTCTGGCAG+CGG + tig0033043:20580-20599 Msa1450730:intron 60.0%
! GATTTTGTGCCCGCTGCCAG+AGG - tig0033043:20593-20612 None:intergenic 60.0%
ACCACCGCACTATGGCATGG+CGG - tig0033043:20615-20634 None:intergenic 60.0%
TCCACCACCGCACTATGGCA+TGG - tig0033043:20618-20637 None:intergenic 60.0%
GGTTAGGCTGCGAGCACTAG+TGG - tig0033043:21589-21608 None:intergenic 60.0%
GGCGGCTGCGGAAAGTAAGG+AGG + tig0033043:15276-15295 Msa1450730:CDS 65.0%
! AAGGAGGGTGTAGGACCCGC+AGG + tig0033043:15292-15311 Msa1450730:CDS 65.0%
! GGTGTTGTGCCTCTGGCAGC+GGG + tig0033043:20581-20600 Msa1450730:intron 65.0%
TCCGCCATGCCATAGTGCGG+TGG + tig0033043:20611-20630 Msa1450730:intron 65.0%
GCCATGCCATAGTGCGGTGG+TGG + tig0033043:20614-20633 Msa1450730:intron 65.0%
GCTCGCAGCCTAACCCTGTC+TGG + tig0033043:21594-21613 Msa1450730:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0033043 gene 14599 23491 14599 ID=Msa1450730;Name=Msa1450730
tig0033043 mRNA 14599 23491 14599 ID=Msa1450730-mRNA-1;Parent=Msa1450730;Name=Msa1450730-mRNA-1;_AED=0.09;_eAED=0.09;_QI=119|1|1|1|0.85|0.75|8|640|1040
tig0033043 exon 14599 14659 14599 ID=Msa1450730-mRNA-1:exon:17623;Parent=Msa1450730-mRNA-1
tig0033043 exon 14787 16254 14787 ID=Msa1450730-mRNA-1:exon:17624;Parent=Msa1450730-mRNA-1
tig0033043 exon 16812 16969 16812 ID=Msa1450730-mRNA-1:exon:17625;Parent=Msa1450730-mRNA-1
tig0033043 exon 18141 18978 18141 ID=Msa1450730-mRNA-1:exon:17626;Parent=Msa1450730-mRNA-1
tig0033043 exon 20168 20314 20168 ID=Msa1450730-mRNA-1:exon:17627;Parent=Msa1450730-mRNA-1
tig0033043 exon 21315 21632 21315 ID=Msa1450730-mRNA-1:exon:17628;Parent=Msa1450730-mRNA-1
tig0033043 exon 22270 22329 22270 ID=Msa1450730-mRNA-1:exon:17629;Parent=Msa1450730-mRNA-1
tig0033043 exon 22660 23491 22660 ID=Msa1450730-mRNA-1:exon:17630;Parent=Msa1450730-mRNA-1
tig0033043 five_prime_UTR 14599 14659 14599 ID=Msa1450730-mRNA-1:five_prime_utr;Parent=Msa1450730-mRNA-1
tig0033043 five_prime_UTR 14787 14844 14787 ID=Msa1450730-mRNA-1:five_prime_utr;Parent=Msa1450730-mRNA-1
tig0033043 CDS 14845 16254 14845 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 16812 16969 16812 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 18141 18978 18141 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 20168 20314 20168 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 21315 21632 21315 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 22270 22329 22270 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 CDS 22660 22851 22660 ID=Msa1450730-mRNA-1:cds;Parent=Msa1450730-mRNA-1
tig0033043 three_prime_UTR 22852 23491 22852 ID=Msa1450730-mRNA-1:three_prime_utr;Parent=Msa1450730-mRNA-1
Gene Sequence

>Msa1450730

ATGGATGAAGAATTAGTTGATGAAAGAATTCAGTTAGAGGCTGTTGAGGATTCACAGCGTCAGAACAAAGACGACGTCGTCGTAAAATCCCAATATGATGGTAAAAATGTAGCTGAGGCTGTTAGTGAAGCAGCAGATACATCACAACAACATCCATATGAAACAGTTGAAGAATTAACAGTAAAAAGTTACAATGGTTTTAGTTTTGATATTGGTACTTCTACTACTCAAGTTCAACATAAACATTGGCAGAATCTTTATCAGATTGGAAATAATTCAGGGAATGGGAATTCAATTAGTGATATTGGGTTGATTAGTAGTGGGCCCGCAGCTACGTCTAGTGCTTGGGAGGATGTTGGATCCACCTCGTTTCCGGAGTTATTAGCTAGAAAATCGCATAGTGATGGTCAGAGTAATGCAGTTGAACATTTGGCGGCTGCGGAAAGTAAGGAGGGTGTAGGACCCGCAGGTGATGTTCATCGAGGAATACGGACAAAGATGATATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATACGTTGAAGAGTAAGGGTGTTGTACGTAAAGGTCCAGCTTCTGATCGCGTTTATGTCCAATCTAGAGAGCAAAATCAGACAAAGGCAGGCGGTGATGCGAATCAGAATTGGGGTAAGATCGGCGTTGGTGCAAATAAGAATCAGATGAAGACGAGCACTGATACAAATCAGAAACAAATGAAGACTGGTATTGGTGCTCAGTCAAACTCTAATGTTTCAGTGAACCGTGGTTCCAAGATTGCAAAATTTCCGATTCACAGCGATGCTGCAGTGCCTAAATCTAGCACGACTGAATGTGACGGTGTAACATTGAGAGAATGGTTAAAATCTGGCCAGCGCAAATCAGGCAAAGTGGAAAGTTTAAATATATTTAGGAAAATTGTGGATTTGGTGGATGACTCACACTCTCGGGGAATAGCGTTGCATAACCTTTATCCATCTTACATTAAATTGCTACCATCAAACCAGGTCATGTACATTGGGTTACCTACTCAAAAACAAACGGCAGGTAAAAGGGTGTCCGAGCAAGTAACATCTTCCTCTGTTGATATGGGGTCCAAGAAACAAAAATTTGACGAGAGTGCGAGGGTTACTGGGAGTGACTTGTGTCCTGAGACTGCTAATAATCATGAAGTTCAAATGCCTTCAATTGGATCACAAAATTATCGTAACAGATATGAGGAAGATAACCATTTTTCTGTGTATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTATCTAATTCAGGTCAATTGTCATCTACCAGTAATTCTATATGTGAAAGATGGGAAAATAAGTGGTATGCGAGTCCTGAGGGAGGTTGCACAATATCATCAAACATCTACTGCCTCGGTGTCCTCCTTTTCGAGCTACTAGGTCATTTTGACTCTGAAAGAGCGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAACATCCTAAGGAAGCTGGATTTTGTCTCTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAGGGGAAATCCTACAATCTGAAGTGATTAATGGATTACAGGAGTTGTGTAATGAGGAATTGTCATCATGTATAGACCAAGAAGATGCAGAATCGGAATTGTTATTGCATTTCCTCATCTCATCAAAAGAGAAGAAGCAGGGTGATGCCTCCAAGTTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGAAGAGGCAGAGAGGAGGCATGGCTTAAGAAAATCCTTGGTTTCCTCTGGCTGGCAGAACAATTACTCATGTCAGAAAGAGATTTTGCCTCTTCAAAAGGAAGTTTTGAGTGTAGAAAGACCGCCCACAGTGTCCCCAATCTCCAATACAAATGAACTGAGATTGATGAAAAATATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGATTTCTGAAACAGATGCCACAGATCACCCAGATAAAGATATACTAAGAACTCGCGAGAATTGGTCTGTGACCCAAAAAGGTGGGGAGCAGCATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTACAACAAGCTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCTGCAAATGTTATATGCTCTCTAAGCTTTGACCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTTGAGATGTCAAACAGATCAAAGCTTAGCTGTGTTTGCTGGAATAGCTATATTAAGAACTATCTTGCCTCTACAGACTACGACGGTGTAGTGAAGCTATGGGATGCTAGTACGGGTCAAGAATTTTCTCAATACAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAGAAATTCTTTGGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAATTTTCTGCTCATTCCTCTCATTTGCTTGCCTTTGGATCTGCGAATTACTCAACTTACTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGCTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCATCTACTGATAATTCATTGAAGATCTGGGATCTCAATAAAACCTCTTCGGTTGGTTCATCCACTAGTGCTCGCAGCCTAACCCTGTCTGGACATACTAATGAAAAGAATTTTGTGGGTTTGTCTGTTGCTGATGGATATATTGCATGCGGTTCAGAATCAAACGAGGTTTACACCTACTATAAGTCGCTTCCCATGCCAATTACTTCACACAAGTTTGGATCTATTGATCCCATCTCTGGTAAAGAGACTGATGATGACCATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAAACACGCTTCTTGCTGCCAATTCAAGTGGATGTATAAAAGTGTTACAAATGGTTTAA
Protein sequence

>Msa1450730

MDEELVDERIQLEAVEDSQRQNKDDVVVKSQYDGKNVAEAVSEAADTSQQHPYETVEELTVKSYNGFSFDIGTSTTQVQHKHWQNLYQIGNNSGNGNSISDIGLISSGPAATSSAWEDVGSTSFPELLARKSHSDGQSNAVEHLAAAESKEGVGPAGDVHRGIRTKMISKSGFAEYFIKNTLKSKGVVRKGPASDRVYVQSREQNQTKAGGDANQNWGKIGVGANKNQMKTSTDTNQKQMKTGIGAQSNSNVSVNRGSKIAKFPIHSDAAVPKSSTTECDGVTLREWLKSGQRKSGKVESLNIFRKIVDLVDDSHSRGIALHNLYPSYIKLLPSNQVMYIGLPTQKQTAGKRVSEQVTSSSVDMGSKKQKFDESARVTGSDLCPETANNHEVQMPSIGSQNYRNRYEEDNHFSVYNFGRMSSIPRVSNSGQLSSTSNSICERWENKWYASPEGGCTISSNIYCLGVLLFELLGHFDSERAHIAAMSDLHHRILPPAFLSEHPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCNEELSSCIDQEDAESELLLHFLISSKEKKQGDASKLVEQLECLESDIEEAERRHGLRKSLVSSGWQNNYSCQKEILPLQKEVLSVERPPTVSPISNTNELRLMKNIGHLESAYFSMRSKVQISETDATDHPDKDILRTRENWSVTQKGGEQHKSKDALGTFFDGLCKYARYNKLEVRGILRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNSYIKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIRNVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSVGSSTSARSLTLSGHTNEKNFVGLSVADGYIACGSESNEVYTYYKSLPMPITSHKFGSIDPISGKETDDDHGQFVSSVCWRGKSNTLLAANSSGCIKVLQMV*