AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0794950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794950 MtrunA17_Chr5g0396821 95.481 1040 41 3 1 1040 1 1034 0.0 2047
Msa0794950 MtrunA17_Chr8g0347471 49.818 823 334 16 275 1040 187 987 0.0 715
Msa0794950 MtrunA17_Chr2g0317491 41.162 826 412 15 272 1040 67 875 5.91e-180 546
Msa0794950 MtrunA17_Chr5g0438901 47.399 346 170 3 695 1039 341 675 6.88e-106 345
Msa0794950 MtrunA17_Chr2g0283891 30.323 155 105 2 782 933 113 267 3.94e-13 71.6
Msa0794950 MtrunA17_Chr1g0197551 23.643 258 183 9 789 1036 21 274 4.60e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794950 AT4G11110.1 47.280 1066 467 19 8 1040 33 1036 0.0 882
Msa0794950 AT2G46340.1 44.681 1081 496 24 2 1040 9 1029 0.0 800
Msa0794950 AT2G46340.2 44.681 1081 496 24 2 1040 9 1029 0.0 800
Msa0794950 AT1G53090.3 40.482 788 391 12 278 1040 60 794 0.0 553
Msa0794950 AT1G53090.1 40.482 788 391 12 278 1040 60 794 0.0 553
Msa0794950 AT1G53090.2 40.482 788 391 12 278 1040 60 794 0.0 553
Msa0794950 AT3G15354.3 40.000 815 407 14 272 1040 66 844 0.0 552
Msa0794950 AT3G15354.1 39.264 815 405 15 272 1040 66 836 1.36e-174 532
Msa0794950 AT3G15354.4 44.649 598 285 9 485 1040 1 594 6.20e-165 498
Msa0794950 AT3G15354.5 44.649 598 285 9 485 1040 1 594 6.20e-165 498
Msa0794950 AT1G53090.4 46.101 577 286 8 485 1040 1 573 2.40e-164 496
Msa0794950 AT2G32950.2 43.659 410 207 5 630 1039 175 560 6.81e-111 355
Msa0794950 AT2G32950.1 43.659 410 207 5 630 1039 288 673 2.99e-109 355
Msa0794950 AT1G53090.5 34.775 601 317 10 278 853 60 610 5.76e-99 325
Msa0794950 AT3G15354.2 34.505 626 331 12 272 851 66 658 6.82e-99 327
Msa0794950 AT5G52250.1 34.877 324 184 11 727 1037 71 380 9.09e-43 161
Msa0794950 AT5G23730.1 34.627 335 179 12 728 1036 41 361 1.14e-42 160
Msa0794950 AT2G21390.1 24.419 258 181 9 789 1036 21 274 1.59e-11 69.3
Msa0794950 AT3G49660.1 27.203 261 164 13 730 981 27 270 4.45e-11 65.9

Find 252 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAGCTTCGCCACCATAAA+AGG 0.166205 5_3:-6845095 Msa0794950:three_prime_UTR
GGGAATTCAATTAGTGATAT+TGG 0.180525 5_3:-6853293 Msa0794950:CDS
TGGAAAGTTTAAATATATTT+AGG 0.190587 5_3:-6852686 Msa0794950:CDS
TGTAACATACATGGATTTAT+TGG 0.199904 5_3:-6845001 Msa0794950:three_prime_UTR
AAAGATTAAGACTTTGTAAT+TGG 0.204724 5_3:-6845259 Msa0794950:three_prime_UTR
AACATCTTCCTCTGTTGATA+TGG 0.226062 5_3:-6852508 Msa0794950:CDS
CTACAATCTGAAGTGATTAA+TGG 0.230123 5_3:-6850275 Msa0794950:CDS
TATCAGATTGGAAATAATTC+AGG 0.230148 5_3:-6853320 Msa0794950:CDS
GTTCTTAGTATATCTTTATC+TGG 0.244121 5_3:+6849846 None:intergenic
TGTTGGATCCACCTCGTTTC+CGG 0.261043 5_3:-6853225 Msa0794950:CDS
ATTCCGATTCTGCATCTTCT+TGG 0.266535 5_3:+6850210 None:intergenic
TCCTCTCATTTGCTTGCCTT+TGG 0.266707 5_3:-6847045 Msa0794950:CDS
GACGAGAGTGCGAGGGTTAC+TGG 0.269493 5_3:-6852465 Msa0794950:CDS
ATTTAGGAAAATTGTGGATT+TGG 0.269624 5_3:-6852670 Msa0794950:CDS
CATTCAGTCGTGCTAGATTT+AGG 0.275646 5_3:+6852765 None:intergenic
CCTTTATACATCTCGAGTTT+TGG 0.280099 5_3:-6845487 Msa0794950:three_prime_UTR
CCAAACTTGTGTGAAGTAAT+TGG 0.283179 5_3:+6845733 None:intergenic
CCAAAACTCGAGATGTATAA+AGG 0.289627 5_3:+6845487 None:intergenic
CCAATTACTTCACACAAGTT+TGG 0.299695 5_3:-6845733 Msa0794950:CDS
CTGATAATTCATTGAAGATC+TGG 0.300298 5_3:-6846891 Msa0794950:CDS
AAAGTGTTACAAATGGTTTA+AGG 0.300773 5_3:-6845592 Msa0794950:exon
AGAGAGCATATAACATTTGC+AGG 0.304868 5_3:+6849675 None:intergenic
TCTTTCACATATAGAATTAC+TGG 0.313843 5_3:+6852275 None:intergenic
GGAATTCAATTAGTGATATT+GGG 0.319812 5_3:-6853292 Msa0794950:CDS
TTTGTATTGATAGCTAAATA+TGG 0.323505 5_3:-6853628 Msa0794950:five_prime_UTR
ATACTCAGCAAACCCTGATT+TGG 0.324942 5_3:+6853073 None:intergenic
CAATCTCAGTTCATTTGTAT+TGG 0.326529 5_3:+6849953 None:intergenic
CATTAATCACTTCAGATTGT+AGG 0.328405 5_3:+6850276 None:intergenic
AATTGGTCTGTGACCCAAAA+AGG 0.335217 5_3:-6849816 Msa0794950:CDS
GTTCATTTGTATTGGAGATT+GGG 0.336479 5_3:+6849961 None:intergenic
ATTTAATGTAAGATGGATAA+AGG 0.342528 5_3:+6852610 None:intergenic
TGAAGTGATTAATGGATTAC+AGG 0.351762 5_3:-6850267 Msa0794950:CDS
AGTTCATTTGTATTGGAGAT+TGG 0.355893 5_3:+6849960 None:intergenic
AATTCTTCAACTGTTTCATA+TGG 0.361630 5_3:+6853425 None:intergenic
ATACTTAATTGTTAAAGTTA+AGG 0.363277 5_3:-6853602 Msa0794950:five_prime_UTR
GCTTTAGGAACCTTCTTTGA+TGG 0.364422 5_3:-6849768 Msa0794950:CDS
TGTTTCAGAAATCTGAACTT+TGG 0.364662 5_3:+6849884 None:intergenic
CAAAGCTTAGCTGTGTTTGC+TGG 0.367423 5_3:-6849521 Msa0794950:CDS
GAAGTTCAAATGCCTTCAAT+TGG 0.370322 5_3:-6852408 Msa0794950:CDS
ACATCTCAACAGCAGGATAA+TGG 0.370679 5_3:+6849553 None:intergenic
ACAAAGATGATATCCAAATC+AGG 0.375965 5_3:-6853086 Msa0794950:CDS
TACTAAGAACTCGCGAGAAT+TGG 0.379466 5_3:-6849833 Msa0794950:CDS
TGGCAGAATCTTTATCAGAT+TGG 0.379730 5_3:-6853332 Msa0794950:CDS
GCGGTGATGCGAATCAGAAT+TGG 0.379858 5_3:-6852950 Msa0794950:CDS
CATAAAAGTAAAGATGCTTT+AGG 0.380101 5_3:-6849783 Msa0794950:CDS
CGGTGATGCGAATCAGAATT+GGG 0.380736 5_3:-6852949 Msa0794950:CDS
CTTCCTTAGGATGTTCTGAT+AGG 0.384102 5_3:+6851531 None:intergenic
CTCTAATTGTTCAACCAACT+TGG 0.385891 5_3:+6850136 None:intergenic
ACATCTTCCTCTGTTGATAT+GGG 0.391461 5_3:-6852507 Msa0794950:CDS
GAAGATTACTTTGCTTCTGC+TGG 0.394367 5_3:-6849636 Msa0794950:CDS
AAATCTGGCCAGCGCAAATC+AGG 0.395977 5_3:-6852714 Msa0794950:CDS
CGCAGCTACGTCTAGTGCTT+GGG 0.397285 5_3:-6853252 Msa0794950:CDS
CCGCAGCTACGTCTAGTGCT+TGG 0.400322 5_3:-6853253 Msa0794950:CDS
ACTCGGGCCAATCAATTTGC+TGG 0.400585 5_3:-6845524 Msa0794950:three_prime_UTR
ATCCCTCGTGTATCTAATTC+AGG 0.401971 5_3:-6852312 Msa0794950:CDS
CCATCATCACGTCCAACAAC+AGG 0.401981 5_3:-6851476 Msa0794950:CDS
ATAATGACAGTGTGGAATTC+TGG 0.408581 5_3:+6845336 None:intergenic
AGAAAATCCTTGGTTTCCTC+TGG 0.410497 5_3:-6850068 Msa0794950:CDS
ATCAGTCTCTTTACCAGAGA+TGG 0.417463 5_3:+6845699 None:intergenic
GAAATTCTTTGGGCACAATC+AGG 0.417682 5_3:-6847107 Msa0794950:CDS
TACATGAACAAAAGTCGGTT+TGG 0.419477 5_3:+6853783 None:intergenic
TGATGAAAGAATTCAGTTAG+AGG 0.419881 5_3:-6853561 Msa0794950:CDS
TTGAGAGAATGGTTAAAATC+TGG 0.420168 5_3:-6852729 Msa0794950:CDS
TTTCAATAGTACCCTGTTGT+TGG 0.422547 5_3:+6851464 None:intergenic
GCTCGCAGCCTAACCCTGTC+TGG 0.432747 5_3:-6846829 Msa0794950:CDS
GGATCTATTGATCCCATCTC+TGG 0.434827 5_3:-6845712 Msa0794950:CDS
AATCTGAACTTTGGATCTCA+TGG 0.436953 5_3:+6849893 None:intergenic
TAGTATGTCCAGACAGGGTT+AGG 0.437776 5_3:+6846821 None:intergenic
GAGTAATGCAGTTGAACATT+TGG 0.442426 5_3:-6853168 Msa0794950:CDS
CCACTTTGCCTGATTTGCGC+TGG 0.443062 5_3:+6852706 None:intergenic
GGTTGAACAATTAGAGTGCT+TGG 0.444330 5_3:-6850129 Msa0794950:CDS
CAAAACTCGAGATGTATAAA+GGG 0.445416 5_3:+6845488 None:intergenic
GTAATTCTATATGTGAAAGA+TGG 0.446114 5_3:-6852272 Msa0794950:CDS
ACAATCCCCAGCAAATTGAT+TGG 0.449621 5_3:+6845517 None:intergenic
GGTGGATGACTCACACTCTC+GGG 0.449991 5_3:-6852649 Msa0794950:CDS
AAACAAATGAAGACTGGTAT+TGG 0.453637 5_3:-6852867 Msa0794950:CDS
CAATGTCTGATCTTCATCAT+AGG 0.456778 5_3:-6851571 Msa0794950:CDS
CATTCTCCACAATACTTGAA+TGG 0.458934 5_3:-6845440 Msa0794950:three_prime_UTR
ATCAGATTGGAAATAATTCA+GGG 0.462085 5_3:-6853319 Msa0794950:CDS
GTTGGACGTGATGATGGTTC+AGG 0.462126 5_3:+6851482 None:intergenic
GTGGGTTTGTCTGTTGCTGA+TGG 0.464615 5_3:-6846147 Msa0794950:CDS
AAATATATTTAGGAAAATTG+TGG 0.466422 5_3:-6852676 Msa0794950:CDS
TGATAATTCATTGAAGATCT+GGG 0.466607 5_3:-6846890 Msa0794950:CDS
TCAGCTATGGGATGCTAGTA+CGG 0.467085 5_3:-6848259 Msa0794950:intron
ATTGGAAATAATTCAGGGAA+TGG 0.468351 5_3:-6853314 Msa0794950:CDS
CCTGTTGTTGGACGTGATGA+TGG 0.468695 5_3:+6851476 None:intergenic
CTCAATAAAACCTCTTCGGT+TGG 0.468709 5_3:-6846865 Msa0794950:CDS
TATGCTCTCTAAGCTTTGAC+CGG 0.469053 5_3:-6849662 Msa0794950:CDS
GCATGGCTTAAGAAAATCCT+TGG 0.470022 5_3:-6850078 Msa0794950:CDS
AATCCGACTTCAAGAAGATC+AGG 0.471165 5_3:+6845394 None:intergenic
CTCGGGCCAATCAATTTGCT+GGG 0.471329 5_3:-6845523 Msa0794950:three_prime_UTR
GTCTGGACATACTAATGAAA+AGG 0.473081 5_3:-6846812 Msa0794950:intron
TCATGATTATTAGCAGTCTC+AGG 0.473314 5_3:+6852429 None:intergenic
TTTCATTAGTATGTCCAGAC+AGG 0.474015 5_3:+6846815 None:intergenic
AGTTTGTTTCAAGTGTGTGC+TGG 0.474338 5_3:-6845663 Msa0794950:CDS
TTCTTAGTATATCTTTATCT+GGG 0.477468 5_3:+6849847 None:intergenic
AGACAAAATCCAGCTTCCTT+AGG 0.483629 5_3:+6851518 None:intergenic
GCTTAAGATTTGACGCAGAA+AGG 0.483942 5_3:-6845465 Msa0794950:three_prime_UTR
ATGTATAAAAGTGTTACAAA+TGG 0.485163 5_3:-6845599 Msa0794950:CDS
TTTGGCGGCTGCGGAAAGTA+AGG 0.486066 5_3:-6853150 Msa0794950:CDS
AGACCAAGAAGATGCAGAAT+CGG 0.486392 5_3:-6850213 Msa0794950:CDS
CTCAAAGTCTGCTAAGTGCT+TGG 0.486767 5_3:-6845225 Msa0794950:three_prime_UTR
GGTAGCAATTTAATGTAAGA+TGG 0.487289 5_3:+6852603 None:intergenic
AATCCTTGGTTTCCTCTGGC+TGG 0.487954 5_3:-6850064 Msa0794950:CDS
TTGGAAATAATTCAGGGAAT+GGG 0.490364 5_3:-6853313 Msa0794950:CDS
AAAACAAACGGCAGGTAAAA+GGG 0.490416 5_3:-6852544 Msa0794950:CDS
ATTGATTGGCCCGAGTGACC+AGG 0.491878 5_3:+6845531 None:intergenic
TAGAAGTCCCTGGTGTGTAT+TGG 0.493208 5_3:-6846980 Msa0794950:CDS
GGATGTTCTGATAGGAAAGC+TGG 0.493573 5_3:+6851539 None:intergenic
CAAACCAGGTCATGTACATT+GGG 0.496767 5_3:-6852578 Msa0794950:CDS
GGATCTCAATAAAACCTCTT+CGG 0.497863 5_3:-6846869 Msa0794950:CDS
AGTTGAACATTTGGCGGCTG+CGG 0.498441 5_3:-6853159 Msa0794950:CDS
TCAGAACATCCTAAGGAAGC+TGG 0.499024 5_3:-6851527 Msa0794950:CDS
TGGTGGATGACTCACACTCT+CGG 0.500502 5_3:-6852650 Msa0794950:CDS
GTGAACATGAAAAGAGGGCT+TGG 0.501727 5_3:-6848215 Msa0794950:CDS
GAGCAAAATCAGACAAAGGC+AGG 0.503141 5_3:-6852972 Msa0794950:CDS
CTTCTTGCTGCCAATTCAAG+TGG 0.504977 5_3:-6845622 Msa0794950:CDS
GATATTGGGTTGATTAGTAG+TGG 0.505458 5_3:-6853278 Msa0794950:CDS
TTCATTTGTATTGGAGATTG+GGG 0.507234 5_3:+6849962 None:intergenic
AAGATTACTTTGCTTCTGCT+GGG 0.507710 5_3:-6849635 Msa0794950:CDS
TAAGTGCTTGGCTGAGCCTA+TGG 0.509447 5_3:-6845213 Msa0794950:three_prime_UTR
TAGGAAAATTGTGGATTTGG+TGG 0.511869 5_3:-6852667 Msa0794950:CDS
ACTGCAGCATCGCTGTGAAT+CGG 0.512278 5_3:+6852789 None:intergenic
ATGTACATGACCTGGTTTGA+TGG 0.512767 5_3:+6852582 None:intergenic
ATATATTAATGTAACATACA+TGG 0.514161 5_3:-6845010 Msa0794950:three_prime_UTR
ACGAGAGTGCGAGGGTTACT+GGG 0.515885 5_3:-6852464 Msa0794950:CDS
GTCGTAAAATCCCAATATGA+TGG 0.518250 5_3:-6853500 Msa0794950:CDS
TCAAACCAGGTCATGTACAT+TGG 0.518776 5_3:-6852579 Msa0794950:CDS
CGGGTCTACACACCTCGAAA+AGG 0.518792 5_3:+6852178 None:intergenic
CATGGGAAGCGACTTATAGT+AGG 0.520691 5_3:+6845756 None:intergenic
GATATTGTGCAACCTCCCTC+AGG 0.523069 5_3:+6852228 None:intergenic
GGTTAGGCTGCGAGCACTAG+TGG 0.523379 5_3:+6846837 None:intergenic
AATTCAGTTAGAGGCTGTTG+AGG 0.529039 5_3:-6853552 Msa0794950:CDS
TAATTGTTCAACCAACTTGG+AGG 0.530716 5_3:+6850139 None:intergenic
TTACAACAAGCTTGAAGTGC+GGG 0.531222 5_3:-6849727 Msa0794950:CDS
AAAGTCGGTTTGGAAAGAAA+AGG 0.531319 5_3:+6853793 None:intergenic
GTGAAAGATGGGAAAATAAG+TGG 0.531333 5_3:-6852260 Msa0794950:CDS
AGAGGAAGATGTTACTTGCT+CGG 0.532696 5_3:+6852518 None:intergenic
CTGTTTGACATCTCAACAGC+AGG 0.533413 5_3:+6849546 None:intergenic
ATTGCTCCATTCAAGTATTG+TGG 0.535442 5_3:+6845434 None:intergenic
TGTAGGAGAGCCATCGTCAA+GGG 0.538797 5_3:+6845561 None:intergenic
CTCATCAAAAGAGAAGAAGC+AGG 0.539036 5_3:-6850168 Msa0794950:CDS
AATACAGTGAACATGAAAAG+AGG 0.539565 5_3:-6848221 Msa0794950:CDS
CAGCTATGGGATGCTAGTAC+GGG 0.540078 5_3:-6848258 Msa0794950:CDS
TAATGCAGTTGAACATTTGG+CGG 0.540996 5_3:-6853165 Msa0794950:CDS
TAATTCTATATGTGAAAGAT+GGG 0.542817 5_3:-6852271 Msa0794950:CDS
GTGATGTTCATCGAGGAATA+CGG 0.544130 5_3:-6853109 Msa0794950:CDS
TCTAGTGCTTGGGAGGATGT+TGG 0.545873 5_3:-6853242 Msa0794950:CDS
TCGGTTTGGAAAGAAAAGGT+TGG 0.546691 5_3:+6853797 None:intergenic
ATAGCTTCGCCACCATAAAA+GGG 0.547516 5_3:-6845094 Msa0794950:three_prime_UTR
AAATTATCGTAACAGATATG+AGG 0.547870 5_3:-6852379 Msa0794950:CDS
ATCTTTATCTGGGTGATCTG+TGG 0.548330 5_3:+6849857 None:intergenic
TTTCCTATCAGAACATCCTA+AGG 0.555337 5_3:-6851534 Msa0794950:CDS
AATCCTGATCTTCTTGAAGT+CGG 0.555418 5_3:-6845397 Msa0794950:three_prime_UTR
GTTTCAAGTGTGTGCTGGAG+AGG 0.558709 5_3:-6845658 Msa0794950:CDS
TCAGTCTCTTTACCAGAGAT+GGG 0.559728 5_3:+6845700 None:intergenic
TCATCAAACATCTACTGCCT+CGG 0.561737 5_3:-6852207 Msa0794950:CDS
TTCGCAATCTTAGAAGTCCC+TGG 0.562968 5_3:-6846990 Msa0794950:CDS
AATCAGAAACAAATGAAGAC+TGG 0.563404 5_3:-6852873 Msa0794950:CDS
ACATAAACGCGATCAGAAGC+TGG 0.563636 5_3:+6853005 None:intergenic
GGACTTACATGAACAAAAGT+CGG 0.568952 5_3:+6853778 None:intergenic
CAAAGATGATATCCAAATCA+GGG 0.570823 5_3:-6853085 Msa0794950:CDS
AAAAGTAAGCACTTTCAAGA+TGG 0.572294 5_3:+6849916 None:intergenic
CATTATGTCATATTTAACAA+AGG 0.572460 5_3:-6845319 Msa0794950:three_prime_UTR
TTGGAGATTGGGGACACTGT+GGG 0.573052 5_3:+6849972 None:intergenic
AAGGAGGGTGTAGGACCCGC+AGG 0.573680 5_3:-6853131 Msa0794950:CDS
AAGTGGTATGCGAGTCCTGA+GGG 0.573844 5_3:-6852243 Msa0794950:CDS
AGTAAGGGTGTTGTACGTAA+AGG 0.574103 5_3:-6853029 Msa0794950:CDS
CTCAAGTTCAACATAAACAT+TGG 0.574254 5_3:-6853352 Msa0794950:CDS
CATCTTCCTCTGTTGATATG+GGG 0.576607 5_3:-6852506 Msa0794950:CDS
CTTGCACAAACCATCAAAGA+AGG 0.577758 5_3:+6849758 None:intergenic
TAATTGTTAAAGTTAAGGCA+TGG 0.582365 5_3:-6853597 Msa0794950:exon
CAAGCACTAGACGTAGCTGC+GGG 0.585754 5_3:+6853254 None:intergenic
AGTACAATCATCACTTCCAC+TGG 0.586568 5_3:+6848155 None:intergenic
AATCAGAATTGGGGTAAGAT+CGG 0.586685 5_3:-6852939 Msa0794950:CDS
GAAGAGGCAGAGAGGAGGCA+TGG 0.588049 5_3:-6850095 Msa0794950:CDS
AATTGGGGTAAGATCGGCGT+TGG 0.590002 5_3:-6852933 Msa0794950:CDS
AGTCCCTGGTGTGTATTGGC+TGG 0.591751 5_3:-6846976 Msa0794950:CDS
TGAGTAATTCGCAGATCCAA+AGG 0.594338 5_3:+6847029 None:intergenic
CCTCGATGAACATCACCTGC+GGG 0.594373 5_3:+6853116 None:intergenic
ATACAGTGAACATGAAAAGA+GGG 0.594379 5_3:-6848220 Msa0794950:CDS
ACGGTGTAACATTGAGAGAA+TGG 0.595622 5_3:-6852740 Msa0794950:CDS
TTCATTAGTATGTCCAGACA+GGG 0.595786 5_3:+6846816 None:intergenic
ATATTGGGTTGATTAGTAGT+GGG 0.599244 5_3:-6853277 Msa0794950:CDS
TTGATTGGCCCGAGTGACCA+GGG 0.599909 5_3:+6845532 None:intergenic
TTTCAAGTGTGTGCTGGAGA+GGG 0.601436 5_3:-6845657 Msa0794950:CDS
GCAGGGTGATGCCTCCAAGT+TGG 0.602461 5_3:-6850150 Msa0794950:CDS
CAGATATAGAAGAGGCAGAG+AGG 0.604924 5_3:-6850103 Msa0794950:CDS
ATTACAGGAGTTGTGTAATG+AGG 0.606394 5_3:-6850252 Msa0794950:CDS
GGCGGCTGCGGAAAGTAAGG+AGG 0.607941 5_3:-6853147 Msa0794950:CDS
GCTAGAAAATCGCATAGTGA+TGG 0.608608 5_3:-6853194 Msa0794950:CDS
CTTGGAATCAGATATAGAAG+AGG 0.610271 5_3:-6850111 Msa0794950:CDS
ATGCTCTCTAAGCTTTGACC+GGG 0.612774 5_3:-6849661 Msa0794950:CDS
AGCTACGTCTAGTGCTTGGG+AGG 0.615576 5_3:-6853249 Msa0794950:CDS
AAGCAAAGTAATCTTCATCC+CGG 0.620471 5_3:+6849643 None:intergenic
AGACTACGACGGTGTAGTGA+AGG 0.621641 5_3:-6849466 Msa0794950:intron
GAGATTGGGGACACTGTGGG+CGG 0.622277 5_3:+6849975 None:intergenic
CCAGCGCAAATCAGGCAAAG+TGG 0.623535 5_3:-6852706 Msa0794950:CDS
ATGTAGGAGAGCCATCGTCA+AGG 0.624373 5_3:+6845560 None:intergenic
TTGTGTGAAGTAATTGGCAT+GGG 0.625244 5_3:+6845739 None:intergenic
TCCAAAGGCAAGCAAATGAG+AGG 0.625566 5_3:+6847044 None:intergenic
GCGGAAAGTAAGGAGGGTGT+AGG 0.626048 5_3:-6853140 Msa0794950:CDS
GTCTACACACCTCGAAAAGG+AGG 0.626294 5_3:+6852181 None:intergenic
GTGGATGACTCACACTCTCG+GGG 0.627042 5_3:-6852648 Msa0794950:CDS
CATCGCAATGAGCATAAGCA+AGG 0.627175 5_3:-6845371 Msa0794950:three_prime_UTR
ATGGCCAGCCAATACACACC+AGG 0.627800 5_3:+6846972 None:intergenic
AAAATTTGACGAGAGTGCGA+GGG 0.629892 5_3:-6852472 Msa0794950:CDS
GACCACAATACAATTTCCAT+AGG 0.630716 5_3:+6845197 None:intergenic
TAGAGAGCAAAATCAGACAA+AGG 0.631176 5_3:-6852976 Msa0794950:CDS
CCAAGCACTAGACGTAGCTG+CGG 0.631837 5_3:+6853253 None:intergenic
CACTTGAAACAAACTGACCA+TGG 0.631982 5_3:+6845671 None:intergenic
AGCTAATAACTCCGGAAACG+AGG 0.632584 5_3:+6853214 None:intergenic
TCCTCGATGAACATCACCTG+CGG 0.634907 5_3:+6853115 None:intergenic
TCGGGCCAATCAATTTGCTG+GGG 0.644939 5_3:-6845522 Msa0794950:three_prime_UTR
CTTGTGTGAAGTAATTGGCA+TGG 0.647108 5_3:+6845738 None:intergenic
ATATAGAAGAGGCAGAGAGG+AGG 0.647655 5_3:-6850100 Msa0794950:CDS
ATTGGAGATTGGGGACACTG+TGG 0.648633 5_3:+6849971 None:intergenic
TCATCAAAAGAGAAGAAGCA+GGG 0.652591 5_3:-6850167 Msa0794950:CDS
CATAGCTTACAGCTTTACGA+TGG 0.656922 5_3:+6846953 None:intergenic
GCGGCTGCGGAAAGTAAGGA+GGG 0.659078 5_3:-6853146 Msa0794950:CDS
TAAATTGCTACCATCAAACC+AGG 0.660402 5_3:-6852592 Msa0794950:CDS
CTTGGACCCCATATCAACAG+AGG 0.661094 5_3:+6852500 None:intergenic
CTGCCAGCCAGAGGAAACCA+AGG 0.661718 5_3:+6850061 None:intergenic
TGCCCTACAAAATTTGCCAG+TGG 0.662507 5_3:-6848171 Msa0794950:CDS
AGCCTATGGAAATTGTATTG+TGG 0.664946 5_3:-6845199 Msa0794950:three_prime_UTR
CATCATCACGTCCAACAACA+GGG 0.666527 5_3:-6851475 Msa0794950:intron
AGTGGATGAACCAACCGAAG+AGG 0.670752 5_3:+6846855 None:intergenic
TACACCGTCGTAGTCTGTAG+AGG 0.672028 5_3:+6849473 None:intergenic
TACAACAAGCTTGAAGTGCG+GGG 0.673879 5_3:-6849726 Msa0794950:CDS
TCTAATGTTTCAGTGAACCG+TGG 0.676680 5_3:-6852831 Msa0794950:CDS
GTAACCCAATGTACATGACC+TGG 0.681232 5_3:+6852574 None:intergenic
GTTACAACAAGCTTGAAGTG+CGG 0.682697 5_3:-6849728 Msa0794950:CDS
AATATGACATAATGACAGTG+TGG 0.686569 5_3:+6845328 None:intergenic
GCTGATGGATATATTGCATG+CGG 0.691894 5_3:-6846132 Msa0794950:CDS
GTAATTGTTCTGCCAGCCAG+AGG 0.692765 5_3:+6850052 None:intergenic
GGTGATGCGAATCAGAATTG+GGG 0.694044 5_3:-6852948 Msa0794950:CDS
ATGATTGTACTGTCAAGCTG+TGG 0.694220 5_3:-6848143 Msa0794950:CDS
CAAAATCAGACAAAGGCAGG+CGG 0.694575 5_3:-6852969 Msa0794950:CDS
TAATAACTCCGGAAACGAGG+TGG 0.696527 5_3:+6853217 None:intergenic
TGTTCTGATAGGAAAGCTGG+AGG 0.696572 5_3:+6851542 None:intergenic
TGACCTGAATTAGATACACG+AGG 0.698186 5_3:+6852309 None:intergenic
GACCTGAATTAGATACACGA+GGG 0.702403 5_3:+6852310 None:intergenic
TGGTATGCGAGTCCTGAGGG+AGG 0.704127 5_3:-6852240 Msa0794950:CDS
TAAGTGGTATGCGAGTCCTG+AGG 0.705242 5_3:-6852244 Msa0794950:CDS
TGGCCAGCCAATACACACCA+GGG 0.709578 5_3:+6846973 None:intergenic
TCTAGCACGACTGAATGTGA+CGG 0.713007 5_3:-6852759 Msa0794950:CDS
CCCGCAGGTGATGTTCATCG+AGG 0.729473 5_3:-6853116 Msa0794950:CDS
CCTCGAAAAGGAGGACACCG+AGG 0.731822 5_3:+6852190 None:intergenic
CTTGCCTCTACAGACTACGA+CGG 0.736845 5_3:-6849477 Msa0794950:CDS
CAAGCTGTGGAGCATCAGTG+AGG 0.737737 5_3:-6848130 Msa0794950:intron
AAAGAGACTGATGATGACCA+TGG 0.778100 5_3:-6845688 Msa0794950:CDS
ATGCGGTTCAGAATCAAACG+AGG 0.781275 5_3:-6846115 Msa0794950:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTTAATTCATTGAA+AGG + chr5_3:6847071-6847090 None:intergenic 10.0%
!! TTTAGTTAATAATTATGAAA+AGG + chr5_3:6847629-6847648 None:intergenic 10.0%
!!! TATTTTTTAATGAAATTATG+CGG - chr5_3:6847909-6847928 Msa0794950:intron 10.0%
!!! AAAAAATTCTGAATTTTTTT+TGG - chr5_3:6848055-6848074 Msa0794950:intron 10.0%
!!! TGAAAATTGAAAATTTTATA+GGG - chr5_3:6848171-6848190 Msa0794950:CDS 10.0%
!! TTTAATGTTACTAATTAAAA+AGG - chr5_3:6852716-6852735 Msa0794950:CDS 10.0%
!! GAATAAAAAAAAAAATGAAA+AGG + chr5_3:6853606-6853625 None:intergenic 10.0%
!!! ATTTTTTTTTTTATTCACAA+AGG - chr5_3:6853610-6853629 Msa0794950:five_prime_UTR 10.0%
!!! TAATTTATTTGATTTATCCA+TGG - chr5_3:6845115-6845134 Msa0794950:three_prime_UTR 15.0%
!! ATACTTAATTGTTAAAGTTA+AGG - chr5_3:6845176-6845195 Msa0794950:three_prime_UTR 15.0%
!! TGGAAAGTTTAAATATATTT+AGG - chr5_3:6846092-6846111 Msa0794950:intron 15.0%
!! AAATATATTTAGGAAAATTG+TGG - chr5_3:6846102-6846121 Msa0794950:intron 15.0%
!!! ATTTTTCTGTGTATAATTTT+GGG - chr5_3:6846431-6846450 Msa0794950:intron 15.0%
!! AGTCAATAATATTAACTAAT+TGG - chr5_3:6847004-6847023 Msa0794950:CDS 15.0%
!! TATTAACTAATTGGTATAAT+TGG - chr5_3:6847013-6847032 Msa0794950:CDS 15.0%
!! CTTTGATAAAATTGTAAATA+TGG - chr5_3:6847432-6847451 Msa0794950:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr5_3:6847858-6847877 None:intergenic 15.0%
!!! AAATTTTCAATTTTCACTTT+TGG + chr5_3:6848167-6848186 None:intergenic 15.0%
!!! GTGAAAATTGAAAATTTTAT+AGG - chr5_3:6848170-6848189 Msa0794950:CDS 15.0%
!! CCTATTTATAAGAAAAATTT+GGG + chr5_3:6850013-6850032 None:intergenic 15.0%
!! TCCTATTTATAAGAAAAATT+TGG + chr5_3:6850014-6850033 None:intergenic 15.0%
!!! AGATTTTCAAAAAAAATGAA+TGG + chr5_3:6851404-6851423 None:intergenic 15.0%
!!! TTTTTTGAAAATCTAAACAA+TGG - chr5_3:6851410-6851429 Msa0794950:intron 15.0%
!!! AAATAAGTAAAGTTCTAAAA+TGG + chr5_3:6852074-6852093 None:intergenic 15.0%
!!! ATTTTAGAACTTTACTTATT+TGG - chr5_3:6852073-6852092 Msa0794950:intron 15.0%
!!! TTTTAGAACTTTACTTATTT+GGG - chr5_3:6852074-6852093 Msa0794950:intron 15.0%
!! ATATATTAATGTAACATACA+TGG - chr5_3:6853768-6853787 Msa0794950:intron 15.0%
!! AATAAATAGTGAGAATTGAA+AGG + chr5_3:6845029-6845048 None:intergenic 20.0%
!!! TTTGTATTGATAGCTAAATA+TGG - chr5_3:6845150-6845169 Msa0794950:three_prime_UTR 20.0%
!!! TACATTTTTACCATCATATT+GGG + chr5_3:6845291-6845310 None:intergenic 20.0%
!! TTAACAGTAAAAAGTTACAA+TGG - chr5_3:6845374-6845393 Msa0794950:three_prime_UTR 20.0%
!!! AATGGTTTTAGTTTTGATAT+TGG - chr5_3:6845392-6845411 Msa0794950:three_prime_UTR 20.0%
!! ATTTAATGTAAGATGGATAA+AGG + chr5_3:6846171-6846190 None:intergenic 20.0%
!! CAAAATTATACACAGAAAAA+TGG + chr5_3:6846432-6846451 None:intergenic 20.0%
!!! CATTTTTCTGTGTATAATTT+TGG - chr5_3:6846430-6846449 Msa0794950:intron 20.0%
!! TAATTCTATATGTGAAAGAT+GGG - chr5_3:6846507-6846526 Msa0794950:intron 20.0%
!! TGCATTTAAATAATGAACAA+AGG + chr5_3:6846635-6846654 None:intergenic 20.0%
!! AACAATGTCTATTTAAATCA+TGG - chr5_3:6847455-6847474 Msa0794950:intron 20.0%
!! CTGCATAAATAAATAAAACA+GGG + chr5_3:6847659-6847678 None:intergenic 20.0%
!! TCTGCATAAATAAATAAAAC+AGG + chr5_3:6847660-6847679 None:intergenic 20.0%
!! CTATTTAATAAAGCTCATTT+CGG + chr5_3:6847756-6847775 None:intergenic 20.0%
!!! GAAATGAGCTTTATTAAATA+GGG - chr5_3:6847755-6847774 Msa0794950:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr5_3:6848231-6848250 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr5_3:6847859-6847878 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr5_3:6847862-6847881 Msa0794950:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - chr5_3:6848139-6848158 Msa0794950:CDS 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - chr5_3:6848140-6848159 Msa0794950:CDS 20.0%
!! GAAAAGTTGACATATTTATA+GGG - chr5_3:6848231-6848250 Msa0794950:CDS 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG + chr5_3:6847771-6847790 None:intergenic 20.0%
!! CACATACGTATTATTTAATA+GGG + chr5_3:6848274-6848293 None:intergenic 20.0%
!! TCACATACGTATTATTTAAT+AGG + chr5_3:6848275-6848294 None:intergenic 20.0%
!! ATGCTGTTAATTCTATAATT+TGG - chr5_3:6848380-6848399 Msa0794950:intron 20.0%
!! TTTAGGAAATCATATCAATA+AGG + chr5_3:6848421-6848440 None:intergenic 20.0%
!! TTCTTAGTATATCTTTATCT+GGG + chr5_3:6848934-6848953 None:intergenic 20.0%
!! TGATAAAACAATAATTCAAG+CGG + chr5_3:6849353-6849372 None:intergenic 20.0%
!! TATTTATGTATTTAGTATGC+TGG - chr5_3:6849802-6849821 Msa0794950:CDS 20.0%
!! ATTTATGTATTTAGTATGCT+GGG - chr5_3:6849803-6849822 Msa0794950:CDS 20.0%
!! ATTTGATACAATTCATTCAT+TGG - chr5_3:6849843-6849862 Msa0794950:CDS 20.0%
!!! CCCAAATTTTTCTTATAAAT+AGG - chr5_3:6850010-6850029 Msa0794950:CDS 20.0%
!!! ATTTTTCTTATAAATAGGAC+CGG - chr5_3:6850015-6850034 Msa0794950:CDS 20.0%
!!! TCAATTTTACAAATGATGAT+TGG + chr5_3:6850417-6850436 None:intergenic 20.0%
!!! TTTTTCGTCTTCTTTTTAAT+TGG + chr5_3:6851099-6851118 None:intergenic 20.0%
!! TTATAAAAACACAAAGAACA+TGG - chr5_3:6851163-6851182 Msa0794950:intron 20.0%
!! TTCAAAAAAAATGAATGGAA+TGG + chr5_3:6851399-6851418 None:intergenic 20.0%
!! TTGTTTCAATTGATGTAATA+GGG + chr5_3:6851478-6851497 None:intergenic 20.0%
!! TTTGTTTCAATTGATGTAAT+AGG + chr5_3:6851479-6851498 None:intergenic 20.0%
!!! TTCTAAAATGGAAGTTTAAA+AGG + chr5_3:6852062-6852081 None:intergenic 20.0%
!!! AAACGTGAACAATTTATTTT+TGG + chr5_3:6852172-6852191 None:intergenic 20.0%
!!! ATTTTTTTTCAAAAGTTCTC+TGG + chr5_3:6852310-6852329 None:intergenic 20.0%
!!! GAACTTTTGAAAAAAAATTG+AGG - chr5_3:6852312-6852331 Msa0794950:CDS 20.0%
!! ATAAAACCATAAACAAACAT+TGG + chr5_3:6852566-6852585 None:intergenic 20.0%
!!! TGTTTATGGTTTTATCAAAT+TGG - chr5_3:6852571-6852590 Msa0794950:CDS 20.0%
!!! ATGTATAAAAGTGTTACAAA+TGG - chr5_3:6853179-6853198 Msa0794950:CDS 20.0%
!! CATTATGTCATATTTAACAA+AGG - chr5_3:6853459-6853478 Msa0794950:CDS 20.0%
!!! TTGTTATACATAATTTTTCC+TGG - chr5_3:6853483-6853502 Msa0794950:CDS 20.0%
!! AAAGATTAAGACTTTGTAAT+TGG - chr5_3:6853519-6853538 Msa0794950:CDS 20.0%
! AGAATTAAGCAATAGAGATA+TGG + chr5_3:6845061-6845080 None:intergenic 25.0%
! ACAAAAATTAAAACTGTCCA+TGG + chr5_3:6845135-6845154 None:intergenic 25.0%
! TAATTGTTAAAGTTAAGGCA+TGG - chr5_3:6845181-6845200 Msa0794950:three_prime_UTR 25.0%
!! CTACATTTTTACCATCATAT+TGG + chr5_3:6845292-6845311 None:intergenic 25.0%
! AATTCTTCAACTGTTTCATA+TGG + chr5_3:6845356-6845375 None:intergenic 25.0%
! TATCAGATTGGAAATAATTC+AGG - chr5_3:6845458-6845477 Msa0794950:three_prime_UTR 25.0%
! ATCAGATTGGAAATAATTCA+GGG - chr5_3:6845459-6845478 Msa0794950:three_prime_UTR 25.0%
! GGAATTCAATTAGTGATATT+GGG - chr5_3:6845486-6845505 Msa0794950:three_prime_UTR 25.0%
! TAAAAATACGTTGAAGAGTA+AGG - chr5_3:6845733-6845752 Msa0794950:CDS 25.0%
! AAAAATACGTTGAAGAGTAA+GGG - chr5_3:6845734-6845753 Msa0794950:CDS 25.0%
! ATTTAGGAAAATTGTGGATT+TGG - chr5_3:6846108-6846127 Msa0794950:intron 25.0%
!! TAATTTTGTGATCCAATTGA+AGG + chr5_3:6846385-6846404 None:intergenic 25.0%
! AAATTATCGTAACAGATATG+AGG - chr5_3:6846399-6846418 Msa0794950:intron 25.0%
! TCTTTCACATATAGAATTAC+TGG + chr5_3:6846506-6846525 None:intergenic 25.0%
! GTAATTCTATATGTGAAAGA+TGG - chr5_3:6846506-6846525 Msa0794950:intron 25.0%
!! TAAAAACGTATCTCATTTTG+AGG + chr5_3:6846695-6846714 None:intergenic 25.0%
! AAAAATATATAGACAGAAGC+GGG + chr5_3:6846774-6846793 None:intergenic 25.0%
! CAAAAATATATAGACAGAAG+CGG + chr5_3:6846775-6846794 None:intergenic 25.0%
!!! CTTCTGTCTATATATTTTTG+AGG - chr5_3:6846775-6846794 Msa0794950:intron 25.0%
!!! ATATATTTTTGAGGTCAACA+TGG - chr5_3:6846784-6846803 Msa0794950:intron 25.0%
! AAGTAACTTAATGTGCAATA+AGG - chr5_3:6847036-6847055 Msa0794950:CDS 25.0%
! CAAAAGATAGATTTGTAGAT+CGG + chr5_3:6847409-6847428 None:intergenic 25.0%
!!! CGAAATGAGCTTTATTAAAT+AGG - chr5_3:6847754-6847773 Msa0794950:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG + chr5_3:6848230-6848249 None:intergenic 25.0%
! CGAAAAGTTGACATATTTAT+AGG - chr5_3:6848230-6848249 Msa0794950:CDS 25.0%
! TCAACATAAGTTAAAGCTTT+AGG + chr5_3:6848438-6848457 None:intergenic 25.0%
!!! TGACAAAAGTTTTAGCTTTA+GGG + chr5_3:6848468-6848487 None:intergenic 25.0%
!! TAAAACTTTTGTCACATAAC+AGG - chr5_3:6848474-6848493 Msa0794950:intron 25.0%
!! AAAACTTTTGTCACATAACA+GGG - chr5_3:6848475-6848494 Msa0794950:intron 25.0%
! CTGAGATTGATGAAAAATAT+AGG - chr5_3:6848839-6848858 Msa0794950:intron 25.0%
! GTTCTTAGTATATCTTTATC+TGG + chr5_3:6848935-6848954 None:intergenic 25.0%
! CATAAAAGTAAAGATGCTTT+AGG - chr5_3:6848995-6849014 Msa0794950:intron 25.0%
! AATTCCACATATATCACTAA+GGG + chr5_3:6849401-6849420 None:intergenic 25.0%
! TAATTCCACATATATCACTA+AGG + chr5_3:6849402-6849421 None:intergenic 25.0%
! TCATCCTTTACTTGAATATT+TGG - chr5_3:6849466-6849485 Msa0794950:intron 25.0%
! CATCCTTTACTTGAATATTT+GGG - chr5_3:6849467-6849486 Msa0794950:CDS 25.0%
! TAACCCAAATATTCAAGTAA+AGG + chr5_3:6849473-6849492 None:intergenic 25.0%
! AAAACTATTCTCTCCATTTA+GGG + chr5_3:6849505-6849524 None:intergenic 25.0%
! TAAAACTATTCTCTCCATTT+AGG + chr5_3:6849506-6849525 None:intergenic 25.0%
!!! AGTTTTAATTTTCTCAAGAG+TGG - chr5_3:6849519-6849538 Msa0794950:CDS 25.0%
! GATTCTTAAAAGTTACACAT+AGG - chr5_3:6849637-6849656 Msa0794950:CDS 25.0%
! TCATTCATTGGATACAATTA+TGG - chr5_3:6849855-6849874 Msa0794950:CDS 25.0%
! CATTCATTGGATACAATTAT+GGG - chr5_3:6849856-6849875 Msa0794950:CDS 25.0%
! ATTCATTGGATACAATTATG+GGG - chr5_3:6849857-6849876 Msa0794950:CDS 25.0%
! ATCATGTACCAGTAAAAAAT+GGG - chr5_3:6850074-6850093 Msa0794950:CDS 25.0%
! ATTCATACCATGAATAATTC+TGG + chr5_3:6850485-6850504 None:intergenic 25.0%
!!! CTTACTGAGTTTTTTTTTGT+TGG - chr5_3:6850813-6850832 Msa0794950:intron 25.0%
!!! ATGTTTATATGGCGATTTTT+TGG + chr5_3:6850888-6850907 None:intergenic 25.0%
! TGAAATGAAATGAAATGGAA+TGG + chr5_3:6851455-6851474 None:intergenic 25.0%
! GATGCAAAATTTATGTTTCA+TGG + chr5_3:6851553-6851572 None:intergenic 25.0%
! AAGAAACTAGATTGTATGTT+TGG + chr5_3:6851606-6851625 None:intergenic 25.0%
!! TTTTTCACAGAGAAATTCTT+TGG - chr5_3:6851660-6851679 Msa0794950:intron 25.0%
!! TTTTCACAGAGAAATTCTTT+GGG - chr5_3:6851661-6851680 Msa0794950:intron 25.0%
! TGATAATTCATTGAAGATCT+GGG - chr5_3:6851888-6851907 Msa0794950:intron 25.0%
! CTGTATGAAATTTATGTTTG+TGG - chr5_3:6852011-6852030 Msa0794950:intron 25.0%
! AAATTGTTTCCTTATCTGAA+TGG - chr5_3:6852113-6852132 Msa0794950:intron 25.0%
!!! GTATTTAGTTTCTAGCTTAT+AGG - chr5_3:6852265-6852284 Msa0794950:CDS 25.0%
! ATACTGAAAACCTATTTAGA+AGG - chr5_3:6852918-6852937 Msa0794950:CDS 25.0%
!! TTACATCTATATTTTCTTGC+AGG - chr5_3:6852993-6853012 Msa0794950:CDS 25.0%
!! TTTTATACATCCACTTGAAT+TGG + chr5_3:6853169-6853188 None:intergenic 25.0%
!! AAAGTGTTACAAATGGTTTA+AGG - chr5_3:6853186-6853205 Msa0794950:CDS 25.0%
!! ATTTTTCCTGGTATCAAATA+TGG - chr5_3:6853495-6853514 Msa0794950:CDS 25.0%
! TGTAACATACATGGATTTAT+TGG - chr5_3:6853777-6853796 Msa0794950:intron 25.0%
ATAGTGAGAATTGAAAGGAA+AGG + chr5_3:6845024-6845043 None:intergenic 30.0%
TGATGAAAGAATTCAGTTAG+AGG - chr5_3:6845217-6845236 Msa0794950:three_prime_UTR 30.0%
CTCAAGTTCAACATAAACAT+TGG - chr5_3:6845426-6845445 Msa0794950:three_prime_UTR 30.0%
ATTGGAAATAATTCAGGGAA+TGG - chr5_3:6845464-6845483 Msa0794950:three_prime_UTR 30.0%
TTGGAAATAATTCAGGGAAT+GGG - chr5_3:6845465-6845484 Msa0794950:three_prime_UTR 30.0%
GGGAATTCAATTAGTGATAT+TGG - chr5_3:6845485-6845504 Msa0794950:three_prime_UTR 30.0%
!! ATATTGGGTTGATTAGTAGT+GGG - chr5_3:6845501-6845520 Msa0794950:three_prime_UTR 30.0%
!!! GATTTTCTAGCTAATAACTC+CGG + chr5_3:6845575-6845594 None:intergenic 30.0%
ACAAAGATGATATCCAAATC+AGG - chr5_3:6845692-6845711 Msa0794950:CDS 30.0%
CAAAGATGATATCCAAATCA+GGG - chr5_3:6845693-6845712 Msa0794950:CDS 30.0%
AATCAGAAACAAATGAAGAC+TGG - chr5_3:6845905-6845924 Msa0794950:intron 30.0%
AAACAAATGAAGACTGGTAT+TGG - chr5_3:6845911-6845930 Msa0794950:intron 30.0%
! AATCGGAAATTTTGCAATCT+TGG + chr5_3:6845975-6845994 None:intergenic 30.0%
TTGAGAGAATGGTTAAAATC+TGG - chr5_3:6846049-6846068 Msa0794950:intron 30.0%
GGTAGCAATTTAATGTAAGA+TGG + chr5_3:6846178-6846197 None:intergenic 30.0%
GTTACCTACTCAAAAACAAA+CGG - chr5_3:6846222-6846241 Msa0794950:intron 30.0%
!! CTCGTCAAATTTTTGTTTCT+TGG + chr5_3:6846299-6846318 None:intergenic 30.0%
!! ATGAACAAAGGTATCATGAA+CGG + chr5_3:6846623-6846642 None:intergenic 30.0%
TACATAGAACTTGTGTAGTA+TGG - chr5_3:6846741-6846760 Msa0794950:intron 30.0%
! TTTCTAGCATTAGTGTTGTT+TGG - chr5_3:6846808-6846827 Msa0794950:intron 30.0%
!! TGAAGTTGATTTTTGCCTTT+TGG - chr5_3:6846838-6846857 Msa0794950:CDS 30.0%
AAGTATAGGGAAAAACCAAA+AGG + chr5_3:6846856-6846875 None:intergenic 30.0%
GAAAGCTAACACTAAGTATA+GGG + chr5_3:6846869-6846888 None:intergenic 30.0%
AGAAAGCTAACACTAAGTAT+AGG + chr5_3:6846870-6846889 None:intergenic 30.0%
ATATCTGAATTGGAGTCTTA+CGG + chr5_3:6846903-6846922 None:intergenic 30.0%
AATGTACGTCATATCTGAAT+TGG + chr5_3:6846913-6846932 None:intergenic 30.0%
! ATTTTCATTTCTCAGCTACT+AGG - chr5_3:6847152-6847171 Msa0794950:intron 30.0%
AATATGGCCTGAATTATAAG+TGG - chr5_3:6847532-6847551 Msa0794950:intron 30.0%
ATATGGCCTGAATTATAAGT+GGG - chr5_3:6847533-6847552 Msa0794950:intron 30.0%
ACTTCAATAGTCTCCTTAAA+TGG + chr5_3:6847575-6847594 None:intergenic 30.0%
! AGTCGAAGGAAAATTTTAGA+GGG + chr5_3:6847829-6847848 None:intergenic 30.0%
! AAGTCGAAGGAAAATTTTAG+AGG + chr5_3:6847830-6847849 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr5_3:6848186-6848205 Msa0794950:CDS 30.0%
AAGTTGAAGGAAAAGTTTAG+AGG - chr5_3:6848199-6848218 Msa0794950:CDS 30.0%
AGTTGAAGGAAAAGTTTAGA+GGG - chr5_3:6848200-6848219 Msa0794950:CDS 30.0%
! TCAGTCTCTGTGAAATATTT+TGG - chr5_3:6848341-6848360 Msa0794950:intron 30.0%
!!! GTGACAAAAGTTTTAGCTTT+AGG + chr5_3:6848469-6848488 None:intergenic 30.0%
CATTAATCACTTCAGATTGT+AGG + chr5_3:6848505-6848524 None:intergenic 30.0%
! CTACAATCTGAAGTGATTAA+TGG - chr5_3:6848503-6848522 Msa0794950:intron 30.0%
!! TGAAGTGATTAATGGATTAC+AGG - chr5_3:6848511-6848530 Msa0794950:intron 30.0%
TTCATTTGTATTGGAGATTG+GGG + chr5_3:6848819-6848838 None:intergenic 30.0%
GTTCATTTGTATTGGAGATT+GGG + chr5_3:6848820-6848839 None:intergenic 30.0%
AGTTCATTTGTATTGGAGAT+TGG + chr5_3:6848821-6848840 None:intergenic 30.0%
CAATCTCAGTTCATTTGTAT+TGG + chr5_3:6848828-6848847 None:intergenic 30.0%
AAAAGTAAGCACTTTCAAGA+TGG + chr5_3:6848865-6848884 None:intergenic 30.0%
TGTTTCAGAAATCTGAACTT+TGG + chr5_3:6848897-6848916 None:intergenic 30.0%
GTATCTGATTCAAAACGAAA+TGG - chr5_3:6849424-6849443 Msa0794950:intron 30.0%
AACGAAATGGTTTACTTTAG+AGG - chr5_3:6849437-6849456 Msa0794950:intron 30.0%
ACGAAATGGTTTACTTTAGA+GGG - chr5_3:6849438-6849457 Msa0794950:intron 30.0%
AAACTATTCTCTCCATTTAG+GGG + chr5_3:6849504-6849523 None:intergenic 30.0%
ACATTCCATCATTTGATTAG+TGG - chr5_3:6849575-6849594 Msa0794950:CDS 30.0%
AGCACATTGACATATGATAT+TGG - chr5_3:6849607-6849626 Msa0794950:CDS 30.0%
TCAATATAATATACTCCCTC+CGG - chr5_3:6849904-6849923 Msa0794950:CDS 30.0%
CTGAAATGTCTCTTGTAAAT+AGG + chr5_3:6849931-6849950 None:intergenic 30.0%
TCAACAAAAGCTAATGTATC+TGG + chr5_3:6849990-6850009 None:intergenic 30.0%
! TAACTATAAAGTACTACCTC+CGG + chr5_3:6850037-6850056 None:intergenic 30.0%
CATCATGTACCAGTAAAAAA+TGG - chr5_3:6850073-6850092 Msa0794950:CDS 30.0%
TCATGTACCAGTAAAAAATG+GGG - chr5_3:6850075-6850094 Msa0794950:CDS 30.0%
CATCTTAGAAGAAAAAGAAC+AGG + chr5_3:6850166-6850185 None:intergenic 30.0%
TTTGTTTGCTTAAATGCAGA+AGG - chr5_3:6850359-6850378 Msa0794950:intron 30.0%
TTGTTTGCTTAAATGCAGAA+GGG - chr5_3:6850360-6850379 Msa0794950:intron 30.0%
! AATGATGATTGGTCAAGATA+GGG + chr5_3:6850406-6850425 None:intergenic 30.0%
! AAATGATGATTGGTCAAGAT+AGG + chr5_3:6850407-6850426 None:intergenic 30.0%
CTGATTACCAGAATTATTCA+TGG - chr5_3:6850475-6850494 Msa0794950:intron 30.0%
! TTTCAATGCATTTTCAGCTA+TGG - chr5_3:6850506-6850525 Msa0794950:intron 30.0%
! TTCAATGCATTTTCAGCTAT+GGG - chr5_3:6850507-6850526 Msa0794950:intron 30.0%
AATACAGTGAACATGAAAAG+AGG - chr5_3:6850557-6850576 Msa0794950:intron 30.0%
ATACAGTGAACATGAAAAGA+GGG - chr5_3:6850558-6850577 Msa0794950:intron 30.0%
TCAATAGCCAACAAAAAACT+AGG - chr5_3:6850765-6850784 Msa0794950:intron 30.0%
CAATAGCCAACAAAAAACTA+GGG - chr5_3:6850766-6850785 Msa0794950:intron 30.0%
!!! TTGTAACCCTAGTTTTTTGT+TGG + chr5_3:6850775-6850794 None:intergenic 30.0%
!! GTGTTTTTGATGCATATGAA+CGG + chr5_3:6851042-6851061 None:intergenic 30.0%
!! TTGGTCTTCTTTTCTTTACA+GGG + chr5_3:6851080-6851099 None:intergenic 30.0%
!!! ATTGGTCTTCTTTTCTTTAC+AGG + chr5_3:6851081-6851100 None:intergenic 30.0%
TAAAAAGAAGACGAAAAAGC+TGG - chr5_3:6851101-6851120 Msa0794950:intron 30.0%
AAATTAGCAAGTTAAGAGAG+TGG - chr5_3:6851285-6851304 Msa0794950:intron 30.0%
! ATTTTTCTTCCACTCCAATT+TGG + chr5_3:6851328-6851347 None:intergenic 30.0%
ATTGGAGTGGAAGAAAAATT+AGG - chr5_3:6851329-6851348 Msa0794950:intron 30.0%
TTGGAGTGGAAGAAAAATTA+GGG - chr5_3:6851330-6851349 Msa0794950:intron 30.0%
AAAAAATGAATGGAATGGAG+TGG + chr5_3:6851394-6851413 None:intergenic 30.0%
TAGGGTGAAATGAAATGAAA+TGG + chr5_3:6851460-6851479 None:intergenic 30.0%
! TGGAAAGACTGAATTTTTCT+CGG + chr5_3:6851504-6851523 None:intergenic 30.0%
CTGATAATTCATTGAAGATC+TGG - chr5_3:6851887-6851906 Msa0794950:intron 30.0%
GACATACTAATGAAAAGGTA+TGG - chr5_3:6851971-6851990 Msa0794950:intron 30.0%
TTACTTATTTGGGCGTTAAA+TGG - chr5_3:6852084-6852103 Msa0794950:intron 30.0%
TACTTATTTGGGCGTTAAAT+GGG - chr5_3:6852085-6852104 Msa0794950:intron 30.0%
TTTGTGATGAACAACTACTT+TGG - chr5_3:6852189-6852208 Msa0794950:intron 30.0%
!! TTCTAGCTTATAGGTGTTTA+TGG - chr5_3:6852274-6852293 Msa0794950:CDS 30.0%
AACTATCTTGCAATAACCAT+GGG + chr5_3:6852397-6852416 None:intergenic 30.0%
AAACTATCTTGCAATAACCA+TGG + chr5_3:6852398-6852417 None:intergenic 30.0%
AGTTCTCGTAAAAAAAGAAC+AGG + chr5_3:6852465-6852484 None:intergenic 30.0%
!! ATTCAAGTTAGCTCTATATC+TGG - chr5_3:6852498-6852517 Msa0794950:CDS 30.0%
TAATAACACAAACGAAACAC+AGG + chr5_3:6852537-6852556 None:intergenic 30.0%
TTCTGACCAATGTTTGTTTA+TGG - chr5_3:6852557-6852576 Msa0794950:CDS 30.0%
ATGGTATAGTCCTTCTAAAT+AGG + chr5_3:6852931-6852950 None:intergenic 30.0%
TATGCAGAAGTCATATTCAT+TGG - chr5_3:6852968-6852987 Msa0794950:CDS 30.0%
ATGCAGAAGTCATATTCATT+GGG - chr5_3:6852969-6852988 Msa0794950:CDS 30.0%
CAAAACTCGAGATGTATAAA+GGG + chr5_3:6853293-6853312 None:intergenic 30.0%
AATATGACATAATGACAGTG+TGG + chr5_3:6853453-6853472 None:intergenic 30.0%
! TCTTTTCCATATTTGATACC+AGG + chr5_3:6853504-6853523 None:intergenic 30.0%
! AACTAAATGCTTCCCTTTTA+TGG + chr5_3:6853699-6853718 None:intergenic 30.0%
GTAGAGACAAAAAACAAAGA+AGG + chr5_3:6853737-6853756 None:intergenic 30.0%
!! AAAGTCGGTTTGGAAAGAAA+AGG + chr5_3:6844988-6845007 None:intergenic 35.0%
TACATGAACAAAAGTCGGTT+TGG + chr5_3:6844998-6845017 None:intergenic 35.0%
GGACTTACATGAACAAAAGT+CGG + chr5_3:6845003-6845022 None:intergenic 35.0%
GTCGTAAAATCCCAATATGA+TGG - chr5_3:6845278-6845297 Msa0794950:three_prime_UTR 35.0%
TGATGGTAAAAATGTAGCTG+AGG - chr5_3:6845295-6845314 Msa0794950:three_prime_UTR 35.0%
TGGCAGAATCTTTATCAGAT+TGG - chr5_3:6845446-6845465 Msa0794950:three_prime_UTR 35.0%
!! GATATTGGGTTGATTAGTAG+TGG - chr5_3:6845500-6845519 Msa0794950:three_prime_UTR 35.0%
GAGTAATGCAGTTGAACATT+TGG - chr5_3:6845610-6845629 Msa0794950:CDS 35.0%
TAATGCAGTTGAACATTTGG+CGG - chr5_3:6845613-6845632 Msa0794950:CDS 35.0%
! TCTGATTTTGCTCTCTAGAT+TGG + chr5_3:6845799-6845818 None:intergenic 35.0%
TAGAGAGCAAAATCAGACAA+AGG - chr5_3:6845802-6845821 Msa0794950:intron 35.0%
AATCAGAATTGGGGTAAGAT+CGG - chr5_3:6845839-6845858 Msa0794950:intron 35.0%
! ATTTTGCAATCTTGGAACCA+CGG + chr5_3:6845967-6845986 None:intergenic 35.0%
TAGGAAAATTGTGGATTTGG+TGG - chr5_3:6846111-6846130 Msa0794950:intron 35.0%
TAAATTGCTACCATCAAACC+AGG - chr5_3:6846186-6846205 Msa0794950:intron 35.0%
AAAAACAAACGGCAGGTAAA+AGG - chr5_3:6846233-6846252 Msa0794950:intron 35.0%
AAAACAAACGGCAGGTAAAA+GGG - chr5_3:6846234-6846253 Msa0794950:intron 35.0%
AACATCTTCCTCTGTTGATA+TGG - chr5_3:6846270-6846289 Msa0794950:intron 35.0%
ACATCTTCCTCTGTTGATAT+GGG - chr5_3:6846271-6846290 Msa0794950:intron 35.0%
TCATGATTATTAGCAGTCTC+AGG + chr5_3:6846352-6846371 None:intergenic 35.0%
GAAGTTCAAATGCCTTCAAT+TGG - chr5_3:6846370-6846389 Msa0794950:intron 35.0%
GTGAAAGATGGGAAAATAAG+TGG - chr5_3:6846518-6846537 Msa0794950:intron 35.0%
!! TGAACAAAGGTATCATGAAC+GGG + chr5_3:6846622-6846641 None:intergenic 35.0%
TATCTGAATTGGAGTCTTAC+GGG + chr5_3:6846902-6846921 None:intergenic 35.0%
ACGTACATTTCTTAGTAACG+TGG - chr5_3:6846924-6846943 Msa0794950:CDS 35.0%
TCTATACTAAACACCCACAT+GGG + chr5_3:6846977-6846996 None:intergenic 35.0%
ATCTATACTAAACACCCACA+TGG + chr5_3:6846978-6846997 None:intergenic 35.0%
CAATGTCTGATCTTCATCAT+AGG - chr5_3:6847207-6847226 Msa0794950:intron 35.0%
TTTCCTATCAGAACATCCTA+AGG - chr5_3:6847244-6847263 Msa0794950:intron 35.0%
TTTCAATAGTACCCTGTTGT+TGG + chr5_3:6847317-6847336 None:intergenic 35.0%
ACCCACATTAGATAGCAATA+TGG - chr5_3:6847516-6847535 Msa0794950:intron 35.0%
GCCATATTGCTATCTAATGT+GGG + chr5_3:6847520-6847539 None:intergenic 35.0%
TATGGCCTGAATTATAAGTG+GGG - chr5_3:6847534-6847553 Msa0794950:intron 35.0%
TCCTTAAATGGAAATGTGGA+GGG + chr5_3:6847563-6847582 None:intergenic 35.0%
AGTCTCCTTAAATGGAAATG+TGG + chr5_3:6847567-6847586 None:intergenic 35.0%
!!! GTTTTATTTATGCAGACGCA+TGG - chr5_3:6847593-6847612 Msa0794950:intron 35.0%
TTATAGGGACTAAAAGTCGA+AGG + chr5_3:6847843-6847862 None:intergenic 35.0%
TCAATAAGGTATGACGTTTG+TGG + chr5_3:6848407-6848426 None:intergenic 35.0%
ATTACAGGAGTTGTGTAATG+AGG - chr5_3:6848526-6848545 Msa0794950:intron 35.0%
! TCTTCTCTTTTGATGAGATG+AGG + chr5_3:6848607-6848626 None:intergenic 35.0%
TCATCAAAAGAGAAGAAGCA+GGG - chr5_3:6848611-6848630 Msa0794950:intron 35.0%
TAATTGTTCAACCAACTTGG+AGG + chr5_3:6848642-6848661 None:intergenic 35.0%
CTCTAATTGTTCAACCAACT+TGG + chr5_3:6848645-6848664 None:intergenic 35.0%
CTTGGAATCAGATATAGAAG+AGG - chr5_3:6848667-6848686 Msa0794950:intron 35.0%
! AGAGATTTTGCCTCTTCAAA+AGG - chr5_3:6848760-6848779 Msa0794950:intron 35.0%
!! CTCAAAACTTCCTTTTGAAG+AGG + chr5_3:6848773-6848792 None:intergenic 35.0%
AATCTGAACTTTGGATCTCA+TGG + chr5_3:6848888-6848907 None:intergenic 35.0%
! AGAGAGCATATAACATTTGC+AGG + chr5_3:6849106-6849125 None:intergenic 35.0%
AAGCAAAGTAATCTTCATCC+CGG + chr5_3:6849138-6849157 None:intergenic 35.0%
AAGATTACTTTGCTTCTGCT+GGG - chr5_3:6849143-6849162 Msa0794950:intron 35.0%
GTATCCCTTAGTGATATATG+TGG - chr5_3:6849394-6849413 Msa0794950:intron 35.0%
GTTATAACATTGCCCCTAAA+TGG - chr5_3:6849489-6849508 Msa0794950:CDS 35.0%
! TTAATTTTCTCAAGAGTGGC+TGG - chr5_3:6849523-6849542 Msa0794950:CDS 35.0%
ACTTGCCACTAATCAAATGA+TGG + chr5_3:6849583-6849602 None:intergenic 35.0%
ATGTCTCTTGTAAATAGGAC+CGG + chr5_3:6849926-6849945 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr5_3:6850018-6850037 Msa0794950:CDS 35.0%
!!! TAGAAGTCCCCATTTTTTAC+TGG + chr5_3:6850085-6850104 None:intergenic 35.0%
AAAGAGTAGATTAACCGTCT+AGG - chr5_3:6850132-6850151 Msa0794950:CDS 35.0%
TATTGTACCAACATCGTACA+TGG - chr5_3:6850223-6850242 Msa0794950:CDS 35.0%
ATGTATTCCATGTACGATGT+TGG + chr5_3:6850233-6850252 None:intergenic 35.0%
! TTCCACTGGCAAATTTTGTA+GGG + chr5_3:6850612-6850631 None:intergenic 35.0%
!!! TTGGCTATTGATTTTCTGTG+AGG + chr5_3:6850756-6850775 None:intergenic 35.0%
!! TAATCTGCTTTTGATAGCAG+TGG + chr5_3:6850855-6850874 None:intergenic 35.0%
CTGCTATCAAAAGCAGATTA+TGG - chr5_3:6850855-6850874 Msa0794950:intron 35.0%
CTATCAAAAGCAGATTATGG+TGG - chr5_3:6850858-6850877 Msa0794950:intron 35.0%
!!! TTATATGGCGATTTTTTGGC+TGG + chr5_3:6850884-6850903 None:intergenic 35.0%
CTGTCTGTTGTGGATATAAT+AGG - chr5_3:6850915-6850934 Msa0794950:intron 35.0%
! TTTTTGATGCATATGAACGG+TGG + chr5_3:6851039-6851058 None:intergenic 35.0%
! TCCTAATAGCCCCTTTTATT+GGG + chr5_3:6851130-6851149 None:intergenic 35.0%
! TTCCTAATAGCCCCTTTTAT+TGG + chr5_3:6851131-6851150 None:intergenic 35.0%
TCGAGAGCTATAATTTCATG+AGG - chr5_3:6851222-6851241 Msa0794950:intron 35.0%
AAAGTGGTTGTTGTACAGTA+TGG - chr5_3:6851254-6851273 Msa0794950:intron 35.0%
! CCAATTTGGAGTATATAGGA+TGG + chr5_3:6851314-6851333 None:intergenic 35.0%
CCATCCTATATACTCCAAAT+TGG - chr5_3:6851311-6851330 Msa0794950:intron 35.0%
! CACTCCAATTTGGAGTATAT+AGG + chr5_3:6851318-6851337 None:intergenic 35.0%
CTATATACTCCAAATTGGAG+TGG - chr5_3:6851316-6851335 Msa0794950:intron 35.0%
TGGAAGAAAAATTAGGGAAG+AGG - chr5_3:6851336-6851355 Msa0794950:intron 35.0%
AAGAAAAATTAGGGAAGAGG+AGG - chr5_3:6851339-6851358 Msa0794950:intron 35.0%
TGAAATGAAATGGAATGGAG+TGG + chr5_3:6851450-6851469 None:intergenic 35.0%
! GGAAAGACTGAATTTTTCTC+GGG + chr5_3:6851503-6851522 None:intergenic 35.0%
! GCACTATATTAGCTCTTCAA+TGG + chr5_3:6851637-6851656 None:intergenic 35.0%
GGATCTCAATAAAACCTCTT+CGG - chr5_3:6851909-6851928 Msa0794950:intron 35.0%
TTCATTAGTATGTCCAGACA+GGG + chr5_3:6851965-6851984 None:intergenic 35.0%
TTTCATTAGTATGTCCAGAC+AGG + chr5_3:6851966-6851985 None:intergenic 35.0%
GTCTGGACATACTAATGAAA+AGG - chr5_3:6851966-6851985 Msa0794950:intron 35.0%
TTATGTTTGTGGAACCTGTA+AGG - chr5_3:6852022-6852041 Msa0794950:intron 35.0%
ACTTATTTGGGCGTTAAATG+GGG - chr5_3:6852086-6852105 Msa0794950:intron 35.0%
! TTTGACTAGCCATTCAGATA+AGG + chr5_3:6852125-6852144 None:intergenic 35.0%
! ACAACTACTTTGGTTCAGTT+TGG - chr5_3:6852199-6852218 Msa0794950:CDS 35.0%
! ACTTTGGTTCAGTTTGGAAT+TGG - chr5_3:6852205-6852224 Msa0794950:CDS 35.0%
TTGCAATAACCATGGGTAAT+AGG + chr5_3:6852390-6852409 None:intergenic 35.0%
! TCGCTTTGACAGAATTTTGT+GGG - chr5_3:6852613-6852632 Msa0794950:CDS 35.0%
ATCATCACAAAATTACCGCA+TGG + chr5_3:6852840-6852859 None:intergenic 35.0%
ATGACTTCTGCATAAAACTC+AGG + chr5_3:6852962-6852981 None:intergenic 35.0%
TTGTGTGAAGTAATTGGCAT+GGG + chr5_3:6853042-6853061 None:intergenic 35.0%
CCAAACTTGTGTGAAGTAAT+TGG + chr5_3:6853048-6853067 None:intergenic 35.0%
CCAATTACTTCACACAAGTT+TGG - chr5_3:6853045-6853064 Msa0794950:CDS 35.0%
CCAAAACTCGAGATGTATAA+AGG + chr5_3:6853294-6853313 None:intergenic 35.0%
! CCTTTATACATCTCGAGTTT+TGG - chr5_3:6853291-6853310 Msa0794950:CDS 35.0%
CATTCTCCACAATACTTGAA+TGG - chr5_3:6853338-6853357 Msa0794950:CDS 35.0%
! ATTGCTCCATTCAAGTATTG+TGG + chr5_3:6853347-6853366 None:intergenic 35.0%
AATCCTGATCTTCTTGAAGT+CGG - chr5_3:6853381-6853400 Msa0794950:CDS 35.0%
ATAATGACAGTGTGGAATTC+TGG + chr5_3:6853445-6853464 None:intergenic 35.0%
AGCCTATGGAAATTGTATTG+TGG - chr5_3:6853579-6853598 Msa0794950:CDS 35.0%
GACCACAATACAATTTCCAT+AGG + chr5_3:6853584-6853603 None:intergenic 35.0%
!! ACTAGCAATTGCAGTTTTGT+AGG - chr5_3:6853633-6853652 Msa0794950:five_prime_UTR 35.0%
! TAAATGCTTCCCTTTTATGG+TGG + chr5_3:6853696-6853715 None:intergenic 35.0%
GAGACAAAAAACAAAGAAGG+AGG + chr5_3:6853734-6853753 None:intergenic 35.0%
!! TCGGTTTGGAAAGAAAAGGT+TGG + chr5_3:6844984-6845003 None:intergenic 40.0%
AATTCAGTTAGAGGCTGTTG+AGG - chr5_3:6845226-6845245 Msa0794950:three_prime_UTR 40.0%
GCTAGAAAATCGCATAGTGA+TGG - chr5_3:6845584-6845603 Msa0794950:exon 40.0%
GTGATGTTCATCGAGGAATA+CGG - chr5_3:6845669-6845688 Msa0794950:CDS 40.0%
ATACTCAGCAAACCCTGATT+TGG + chr5_3:6845708-6845727 None:intergenic 40.0%
!! AGTAAGGGTGTTGTACGTAA+AGG - chr5_3:6845749-6845768 Msa0794950:CDS 40.0%
TCTAATGTTTCAGTGAACCG+TGG - chr5_3:6845947-6845966 Msa0794950:intron 40.0%
CATTCAGTCGTGCTAGATTT+AGG + chr5_3:6846016-6846035 None:intergenic 40.0%
ACGGTGTAACATTGAGAGAA+TGG - chr5_3:6846038-6846057 Msa0794950:intron 40.0%
! ATGTACATGACCTGGTTTGA+TGG + chr5_3:6846199-6846218 None:intergenic 40.0%
TCAAACCAGGTCATGTACAT+TGG - chr5_3:6846199-6846218 Msa0794950:intron 40.0%
CAAACCAGGTCATGTACATT+GGG - chr5_3:6846200-6846219 Msa0794950:intron 40.0%
! AGAGGAAGATGTTACTTGCT+CGG + chr5_3:6846263-6846282 None:intergenic 40.0%
CATCTTCCTCTGTTGATATG+GGG - chr5_3:6846272-6846291 Msa0794950:intron 40.0%
! AAAAATTTGACGAGAGTGCG+AGG - chr5_3:6846305-6846324 Msa0794950:intron 40.0%
! AAAATTTGACGAGAGTGCGA+GGG - chr5_3:6846306-6846325 Msa0794950:intron 40.0%
ATCCCTCGTGTATCTAATTC+AGG - chr5_3:6846466-6846485 Msa0794950:intron 40.0%
GACCTGAATTAGATACACGA+GGG + chr5_3:6846471-6846490 None:intergenic 40.0%
TGACCTGAATTAGATACACG+AGG + chr5_3:6846472-6846491 None:intergenic 40.0%
TCATCAAACATCTACTGCCT+CGG - chr5_3:6846571-6846590 Msa0794950:intron 40.0%
ATCTGAATTGGAGTCTTACG+GGG + chr5_3:6846901-6846920 None:intergenic 40.0%
CTTCTAATCAACCTGAAACG+AGG + chr5_3:6846953-6846972 None:intergenic 40.0%
GTTGATTAGAAGTCCCATGT+GGG - chr5_3:6846961-6846980 Msa0794950:CDS 40.0%
TTGTTCTCAGTCATTCTCAC+TGG - chr5_3:6847095-6847114 Msa0794950:CDS 40.0%
CTTCCTTAGGATGTTCTGAT+AGG + chr5_3:6847250-6847269 None:intergenic 40.0%
AGACAAAATCCAGCTTCCTT+AGG + chr5_3:6847263-6847282 None:intergenic 40.0%
GGCCATATTGCTATCTAATG+TGG + chr5_3:6847521-6847540 None:intergenic 40.0%
ACCCTCCACATTTCCATTTA+AGG - chr5_3:6847559-6847578 Msa0794950:intron 40.0%
CTCCTTAAATGGAAATGTGG+AGG + chr5_3:6847564-6847583 None:intergenic 40.0%
AGACCAAGAAGATGCAGAAT+CGG - chr5_3:6848565-6848584 Msa0794950:intron 40.0%
ATTCCGATTCTGCATCTTCT+TGG + chr5_3:6848571-6848590 None:intergenic 40.0%
CTCATCAAAAGAGAAGAAGC+AGG - chr5_3:6848610-6848629 Msa0794950:intron 40.0%
! GGTTGAACAATTAGAGTGCT+TGG - chr5_3:6848649-6848668 Msa0794950:intron 40.0%
GCATGGCTTAAGAAAATCCT+TGG - chr5_3:6848700-6848719 Msa0794950:intron 40.0%
AGAAAATCCTTGGTTTCCTC+TGG - chr5_3:6848710-6848729 Msa0794950:intron 40.0%
ATCTTTATCTGGGTGATCTG+TGG + chr5_3:6848924-6848943 None:intergenic 40.0%
TACTAAGAACTCGCGAGAAT+TGG - chr5_3:6848945-6848964 Msa0794950:intron 40.0%
! AATTGGTCTGTGACCCAAAA+AGG - chr5_3:6848962-6848981 Msa0794950:intron 40.0%
!! GCTTTAGGAACCTTCTTTGA+TGG - chr5_3:6849010-6849029 Msa0794950:intron 40.0%
CTTGCACAAACCATCAAAGA+AGG + chr5_3:6849023-6849042 None:intergenic 40.0%
GTTACAACAAGCTTGAAGTG+CGG - chr5_3:6849050-6849069 Msa0794950:intron 40.0%
TTACAACAAGCTTGAAGTGC+GGG - chr5_3:6849051-6849070 Msa0794950:intron 40.0%
! TATGCTCTCTAAGCTTTGAC+CGG - chr5_3:6849116-6849135 Msa0794950:intron 40.0%
GAAGATTACTTTGCTTCTGC+TGG - chr5_3:6849142-6849161 Msa0794950:intron 40.0%
ACATCTCAACAGCAGGATAA+TGG + chr5_3:6849228-6849247 None:intergenic 40.0%
CTTTCTCTTGTCTGTTTGAG+TGG - chr5_3:6849688-6849707 Msa0794950:CDS 40.0%
!! GTACTCTGAAACAGTCGTAT+TGG - chr5_3:6849737-6849756 Msa0794950:CDS 40.0%
! GAAACAGTCGTATTGGTACT+AGG - chr5_3:6849744-6849763 Msa0794950:CDS 40.0%
AACAGGACTTTCAACCTAGA+CGG + chr5_3:6850149-6850168 None:intergenic 40.0%
TGTGCTTCCTACATTGTTGT+AGG - chr5_3:6850273-6850292 Msa0794950:CDS 40.0%
! GCAAATTTTGTAGGGCATAC+TGG + chr5_3:6850604-6850623 None:intergenic 40.0%
! CTTCCACTGGCAAATTTTGT+AGG + chr5_3:6850613-6850632 None:intergenic 40.0%
AGTACAATCATCACTTCCAC+TGG + chr5_3:6850626-6850645 None:intergenic 40.0%
ATGATTGTACTGTCAAGCTG+TGG - chr5_3:6850635-6850654 Msa0794950:intron 40.0%
ACAGCTGGGTCATGTTTATA+TGG + chr5_3:6850899-6850918 None:intergenic 40.0%
TATATCCACAACAGACAGCT+GGG + chr5_3:6850913-6850932 None:intergenic 40.0%
TTATATCCACAACAGACAGC+TGG + chr5_3:6850914-6850933 None:intergenic 40.0%
! TATAATAGGTGTTGTGCCTC+TGG - chr5_3:6850929-6850948 Msa0794950:intron 40.0%
AAAGCTGGCAACCCAATAAA+AGG - chr5_3:6851116-6851135 Msa0794950:intron 40.0%
AAGCTGGCAACCCAATAAAA+GGG - chr5_3:6851117-6851136 Msa0794950:intron 40.0%
ACCCAATAAAAGGGGCTATT+AGG - chr5_3:6851126-6851145 Msa0794950:intron 40.0%
CATGAGGCAGTAGATAAAAG+TGG - chr5_3:6851238-6851257 Msa0794950:intron 40.0%
AATTAGGGAAGAGGAGGAAA+TGG - chr5_3:6851345-6851364 Msa0794950:intron 40.0%
ATTAGGGAAGAGGAGGAAAT+GGG - chr5_3:6851346-6851365 Msa0794950:intron 40.0%
GGAATGGAGTGGTATATGAT+GGG + chr5_3:6851383-6851402 None:intergenic 40.0%
TGGAATGGAGTGGTATATGA+TGG + chr5_3:6851384-6851403 None:intergenic 40.0%
TGAAATGGAATGGAGTGGTA+TGG + chr5_3:6851445-6851464 None:intergenic 40.0%
AATATCTGTCACTCTGCTGA+TGG + chr5_3:6851524-6851543 None:intergenic 40.0%
GCAGAGTGACAGATATTGAA+TGG - chr5_3:6851527-6851546 Msa0794950:CDS 40.0%
GAAATTCTTTGGGCACAATC+AGG - chr5_3:6851671-6851690 Msa0794950:intron 40.0%
TGAGTAATTCGCAGATCCAA+AGG + chr5_3:6851752-6851771 None:intergenic 40.0%
CATAGCTTACAGCTTTACGA+TGG + chr5_3:6851828-6851847 None:intergenic 40.0%
CTCAATAAAACCTCTTCGGT+TGG - chr5_3:6851913-6851932 Msa0794950:intron 40.0%
GTAATAGGCATGAGCATTCT+AGG + chr5_3:6852375-6852394 None:intergenic 40.0%
AAAATTCTGTCAAAGCGAGG+TGG + chr5_3:6852611-6852630 None:intergenic 40.0%
CACAAAATTCTGTCAAAGCG+AGG + chr5_3:6852614-6852633 None:intergenic 40.0%
! CTCGCTTTGACAGAATTTTG+TGG - chr5_3:6852612-6852631 Msa0794950:CDS 40.0%
! GCTGATGGATATATTGCATG+CGG - chr5_3:6852646-6852665 Msa0794950:CDS 40.0%
TCACAAAATTACCGCATGGT+AGG + chr5_3:6852836-6852855 None:intergenic 40.0%
GAAGGACTATACCATGATGA+AGG - chr5_3:6852936-6852955 Msa0794950:CDS 40.0%
TAAAACTCAGGCCTTCATCA+TGG + chr5_3:6852950-6852969 None:intergenic 40.0%
CTTGTGTGAAGTAATTGGCA+TGG + chr5_3:6853043-6853062 None:intergenic 40.0%
TCAGTCTCTTTACCAGAGAT+GGG + chr5_3:6853081-6853100 None:intergenic 40.0%
ATCAGTCTCTTTACCAGAGA+TGG + chr5_3:6853082-6853101 None:intergenic 40.0%
! AAAGAGACTGATGATGACCA+TGG - chr5_3:6853090-6853109 Msa0794950:CDS 40.0%
CACTTGAAACAAACTGACCA+TGG + chr5_3:6853110-6853129 None:intergenic 40.0%
! AGTTTGTTTCAAGTGTGTGC+TGG - chr5_3:6853115-6853134 Msa0794950:CDS 40.0%
ACAATCCCCAGCAAATTGAT+TGG + chr5_3:6853264-6853283 None:intergenic 40.0%
GCTTAAGATTTGACGCAGAA+AGG - chr5_3:6853313-6853332 Msa0794950:CDS 40.0%
AATCCGACTTCAAGAAGATC+AGG + chr5_3:6853387-6853406 None:intergenic 40.0%
AATAGCTTCGCCACCATAAA+AGG - chr5_3:6853683-6853702 Msa0794950:intron 40.0%
ATAGCTTCGCCACCATAAAA+GGG - chr5_3:6853684-6853703 Msa0794950:intron 40.0%
TAATAACTCCGGAAACGAGG+TGG + chr5_3:6845564-6845583 None:intergenic 45.0%
AGCTAATAACTCCGGAAACG+AGG + chr5_3:6845567-6845586 None:intergenic 45.0%
ACATAAACGCGATCAGAAGC+TGG + chr5_3:6845776-6845795 None:intergenic 45.0%
GAGCAAAATCAGACAAAGGC+AGG - chr5_3:6845806-6845825 Msa0794950:intron 45.0%
CAAAATCAGACAAAGGCAGG+CGG - chr5_3:6845809-6845828 Msa0794950:intron 45.0%
CGGTGATGCGAATCAGAATT+GGG - chr5_3:6845829-6845848 Msa0794950:intron 45.0%
GGTGATGCGAATCAGAATTG+GGG - chr5_3:6845830-6845849 Msa0794950:intron 45.0%
TCTAGCACGACTGAATGTGA+CGG - chr5_3:6846019-6846038 Msa0794950:intron 45.0%
GTAACCCAATGTACATGACC+TGG + chr5_3:6846207-6846226 None:intergenic 45.0%
!!! CCTGCCGTTTGTTTTTGAGT+AGG + chr5_3:6846229-6846248 None:intergenic 45.0%
CCTACTCAAAAACAAACGGC+AGG - chr5_3:6846226-6846245 Msa0794950:intron 45.0%
GGTTGATTAGAAGTCCCATG+TGG - chr5_3:6846960-6846979 Msa0794950:CDS 45.0%
TGTTCTGATAGGAAAGCTGG+AGG + chr5_3:6847239-6847258 None:intergenic 45.0%
GGATGTTCTGATAGGAAAGC+TGG + chr5_3:6847242-6847261 None:intergenic 45.0%
TCAGAACATCCTAAGGAAGC+TGG - chr5_3:6847251-6847270 Msa0794950:intron 45.0%
! AGGAAGCTGGATTTTGTCTC+TGG - chr5_3:6847264-6847283 Msa0794950:intron 45.0%
CATCATCACGTCCAACAACA+GGG - chr5_3:6847303-6847322 Msa0794950:intron 45.0%
GGGTCACTCAACAATACCTA+TGG + chr5_3:6847500-6847519 None:intergenic 45.0%
GGTTGCCCCACTTATAATTC+AGG + chr5_3:6847542-6847561 None:intergenic 45.0%
CAGATATAGAAGAGGCAGAG+AGG - chr5_3:6848675-6848694 Msa0794950:intron 45.0%
ATATAGAAGAGGCAGAGAGG+AGG - chr5_3:6848678-6848697 Msa0794950:intron 45.0%
TACAACAAGCTTGAAGTGCG+GGG - chr5_3:6849052-6849071 Msa0794950:intron 45.0%
! ATGCTCTCTAAGCTTTGACC+GGG - chr5_3:6849117-6849136 Msa0794950:intron 45.0%
CTGTTTGACATCTCAACAGC+AGG + chr5_3:6849235-6849254 None:intergenic 45.0%
CAAAGCTTAGCTGTGTTTGC+TGG - chr5_3:6849257-6849276 Msa0794950:intron 45.0%
GAATGTGATGTTAGCATGCG+AGG + chr5_3:6849561-6849580 None:intergenic 45.0%
GGTAACAATCATGTTGCTCG+TGG - chr5_3:6849878-6849897 Msa0794950:CDS 45.0%
CTCTTGTAAATAGGACCGGA+GGG + chr5_3:6849922-6849941 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + chr5_3:6849923-6849942 None:intergenic 45.0%
AATCATGCCACGCACAATCT+TGG + chr5_3:6850303-6850322 None:intergenic 45.0%
!! CAGAAGGGCATTAGTTCACA+TGG - chr5_3:6850375-6850394 Msa0794950:intron 45.0%
TCAGCTATGGGATGCTAGTA+CGG - chr5_3:6850519-6850538 Msa0794950:intron 45.0%
GTGAACATGAAAAGAGGGCT+TGG - chr5_3:6850563-6850582 Msa0794950:intron 45.0%
TGCCCTACAAAATTTGCCAG+TGG - chr5_3:6850607-6850626 Msa0794950:intron 45.0%
AGCTGGCAACCCAATAAAAG+GGG - chr5_3:6851118-6851137 Msa0794950:intron 45.0%
GAACATGCAAGTTTGAGCGT+TGG - chr5_3:6851189-6851208 Msa0794950:intron 45.0%
!! TGCAAGTTTGAGCGTTGGAT+AGG - chr5_3:6851194-6851213 Msa0794950:intron 45.0%
TGGCAGTAGTTTGAGCTGAA+CGG + chr5_3:6851586-6851605 None:intergenic 45.0%
TCCTCTCATTTGCTTGCCTT+TGG - chr5_3:6851733-6851752 Msa0794950:intron 45.0%
TCCAAAGGCAAGCAAATGAG+AGG + chr5_3:6851737-6851756 None:intergenic 45.0%
TTCGCAATCTTAGAAGTCCC+TGG - chr5_3:6851788-6851807 Msa0794950:intron 45.0%
TAGAAGTCCCTGGTGTGTAT+TGG - chr5_3:6851798-6851817 Msa0794950:intron 45.0%
TAGTATGTCCAGACAGGGTT+AGG + chr5_3:6851960-6851979 None:intergenic 45.0%
CTCTGACAGACAAACCTTAC+AGG + chr5_3:6852039-6852058 None:intergenic 45.0%
TTATGAAGTGTGCACGCGTT+CGG - chr5_3:6852146-6852165 Msa0794950:intron 45.0%
ATGCTCATGCCTATTACCCA+TGG - chr5_3:6852378-6852397 Msa0794950:CDS 45.0%
ATGCGGTTCAGAATCAAACG+AGG - chr5_3:6852663-6852682 Msa0794950:CDS 45.0%
AGTTCGCAAATCCTACCATG+CGG - chr5_3:6852822-6852841 Msa0794950:CDS 45.0%
CATGGGAAGCGACTTATAGT+AGG + chr5_3:6853025-6853044 None:intergenic 45.0%
GGATCTATTGATCCCATCTC+TGG - chr5_3:6853066-6853085 Msa0794950:CDS 45.0%
! TTTCAAGTGTGTGCTGGAGA+GGG - chr5_3:6853121-6853140 Msa0794950:CDS 45.0%
CTTCTTGCTGCCAATTCAAG+TGG - chr5_3:6853156-6853175 Msa0794950:CDS 45.0%
! GGAAAGTTTTCCCTTGACGA+TGG - chr5_3:6853207-6853226 Msa0794950:CDS 45.0%
AGTGACCAGGGCAAAAATGT+AGG + chr5_3:6853237-6853256 None:intergenic 45.0%
! ACATTTTTGCCCTGGTCACT+CGG - chr5_3:6853237-6853256 Msa0794950:CDS 45.0%
CATCGCAATGAGCATAAGCA+AGG - chr5_3:6853407-6853426 Msa0794950:CDS 45.0%
CTCAAAGTCTGCTAAGTGCT+TGG - chr5_3:6853553-6853572 Msa0794950:CDS 45.0%
!! CAAAAATTAAATTAAAAATA+GGG + chr5_3:6847889-6847908 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG + chr5_3:6847890-6847909 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+AGG + chr5_3:6847963-6847982 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + chr5_3:6848016-6848035 None:intergenic 5.0%
TCTAGTGCTTGGGAGGATGT+TGG - chr5_3:6845536-6845555 Msa0794950:three_prime_UTR 50.0%
TGTTGGATCCACCTCGTTTC+CGG - chr5_3:6845553-6845572 Msa0794950:three_prime_UTR 50.0%
AGTTGAACATTTGGCGGCTG+CGG - chr5_3:6845619-6845638 Msa0794950:CDS 50.0%
TCCTCGATGAACATCACCTG+CGG + chr5_3:6845666-6845685 None:intergenic 50.0%
GCGGTGATGCGAATCAGAAT+TGG - chr5_3:6845828-6845847 Msa0794950:intron 50.0%
AATTGGGGTAAGATCGGCGT+TGG - chr5_3:6845845-6845864 Msa0794950:intron 50.0%
ACTGCAGCATCGCTGTGAAT+CGG + chr5_3:6845992-6846011 None:intergenic 50.0%
AAATCTGGCCAGCGCAAATC+AGG - chr5_3:6846064-6846083 Msa0794950:intron 50.0%
! TGGTGGATGACTCACACTCT+CGG - chr5_3:6846128-6846147 Msa0794950:CDS 50.0%
CTTGGACCCCATATCAACAG+AGG + chr5_3:6846281-6846300 None:intergenic 50.0%
TAAGTGGTATGCGAGTCCTG+AGG - chr5_3:6846534-6846553 Msa0794950:intron 50.0%
AAGTGGTATGCGAGTCCTGA+GGG - chr5_3:6846535-6846554 Msa0794950:intron 50.0%
GATATTGTGCAACCTCCCTC+AGG + chr5_3:6846553-6846572 None:intergenic 50.0%
GTCTACACACCTCGAAAAGG+AGG + chr5_3:6846600-6846619 None:intergenic 50.0%
TGAATTGGAGTCTTACGGGG+AGG + chr5_3:6846898-6846917 None:intergenic 50.0%
!! GTTGGACGTGATGATGGTTC+AGG + chr5_3:6847299-6847318 None:intergenic 50.0%
CCTGTTGTTGGACGTGATGA+TGG + chr5_3:6847305-6847324 None:intergenic 50.0%
CCATCATCACGTCCAACAAC+AGG - chr5_3:6847302-6847321 Msa0794950:intron 50.0%
ATCATGGCATGCCCTTACGT+TGG - chr5_3:6847471-6847490 Msa0794950:intron 50.0%
ACCTATGGCCACCAACGTAA+GGG + chr5_3:6847485-6847504 None:intergenic 50.0%
TACCTATGGCCACCAACGTA+AGG + chr5_3:6847486-6847505 None:intergenic 50.0%
AATCCTTGGTTTCCTCTGGC+TGG - chr5_3:6848714-6848733 Msa0794950:intron 50.0%
GTAATTGTTCTGCCAGCCAG+AGG + chr5_3:6848729-6848748 None:intergenic 50.0%
TTGGAGATTGGGGACACTGT+GGG + chr5_3:6848809-6848828 None:intergenic 50.0%
ATTGGAGATTGGGGACACTG+TGG + chr5_3:6848810-6848829 None:intergenic 50.0%
TGGTCTGTGACCCAAAAAGG+TGG - chr5_3:6848965-6848984 Msa0794950:intron 50.0%
GGTCTGTGACCCAAAAAGGT+GGG - chr5_3:6848966-6848985 Msa0794950:intron 50.0%
GTCTGTGACCCAAAAAGGTG+GGG - chr5_3:6848967-6848986 Msa0794950:intron 50.0%
! ATGCTGCTCCCCACCTTTTT+GGG + chr5_3:6848978-6848997 None:intergenic 50.0%
! TATGCTGCTCCCCACCTTTT+TGG + chr5_3:6848979-6848998 None:intergenic 50.0%
CTTGCCTCTACAGACTACGA+CGG - chr5_3:6849301-6849320 Msa0794950:intron 50.0%
TACACCGTCGTAGTCTGTAG+AGG + chr5_3:6849308-6849327 None:intergenic 50.0%
AGACTACGACGGTGTAGTGA+AGG - chr5_3:6849312-6849331 Msa0794950:intron 50.0%
!! TGGCTGGCCTACAACAATGT+AGG + chr5_3:6850283-6850302 None:intergenic 50.0%
CAGCTATGGGATGCTAGTAC+GGG - chr5_3:6850520-6850539 Msa0794950:intron 50.0%
GTGCATCAGTGCATGGGAAA+GGG + chr5_3:6850678-6850697 None:intergenic 50.0%
AAATCCGCCATGCCATAGTG+CGG - chr5_3:6850963-6850982 Msa0794950:intron 50.0%
TTTCATCCACCACCGCACTA+TGG + chr5_3:6850978-6850997 None:intergenic 50.0%
!! GTTTGAGCGTTGGATAGGCA+AGG - chr5_3:6851199-6851218 Msa0794950:intron 50.0%
GAGGAGGAAATGGGATGGAA+TGG - chr5_3:6851355-6851374 Msa0794950:intron 50.0%
AGTGGATGAACCAACCGAAG+AGG + chr5_3:6851926-6851945 None:intergenic 50.0%
ATTCTGTCAAAGCGAGGTGG+AGG + chr5_3:6852608-6852627 None:intergenic 50.0%
GTGGGTTTGTCTGTTGCTGA+TGG - chr5_3:6852631-6852650 Msa0794950:CDS 50.0%
! GTTTCAAGTGTGTGCTGGAG+AGG - chr5_3:6853120-6853139 Msa0794950:CDS 50.0%
TGTAGGAGAGCCATCGTCAA+GGG + chr5_3:6853220-6853239 None:intergenic 50.0%
ATGTAGGAGAGCCATCGTCA+AGG + chr5_3:6853221-6853240 None:intergenic 50.0%
! GCTCTCCTACATTTTTGCCC+TGG - chr5_3:6853229-6853248 Msa0794950:CDS 50.0%
! CATTTTTGCCCTGGTCACTC+GGG - chr5_3:6853238-6853257 Msa0794950:CDS 50.0%
ACTCGGGCCAATCAATTTGC+TGG - chr5_3:6853254-6853273 Msa0794950:CDS 50.0%
! CTCGGGCCAATCAATTTGCT+GGG - chr5_3:6853255-6853274 Msa0794950:CDS 50.0%
!! TCGGGCCAATCAATTTGCTG+GGG - chr5_3:6853256-6853275 Msa0794950:CDS 50.0%
TAAGTGCTTGGCTGAGCCTA+TGG - chr5_3:6853565-6853584 Msa0794950:CDS 50.0%
CAAGCACTAGACGTAGCTGC+GGG + chr5_3:6845527-6845546 None:intergenic 55.0%
CCAAGCACTAGACGTAGCTG+CGG + chr5_3:6845528-6845547 None:intergenic 55.0%
CGCAGCTACGTCTAGTGCTT+GGG - chr5_3:6845526-6845545 Msa0794950:three_prime_UTR 55.0%
AGCTACGTCTAGTGCTTGGG+AGG - chr5_3:6845529-6845548 Msa0794950:three_prime_UTR 55.0%
TTTGGCGGCTGCGGAAAGTA+AGG - chr5_3:6845628-6845647 Msa0794950:CDS 55.0%
! GCGGAAAGTAAGGAGGGTGT+AGG - chr5_3:6845638-6845657 Msa0794950:CDS 55.0%
CCTCGATGAACATCACCTGC+GGG + chr5_3:6845665-6845684 None:intergenic 55.0%
! CCACTTTGCCTGATTTGCGC+TGG + chr5_3:6846075-6846094 None:intergenic 55.0%
CCAGCGCAAATCAGGCAAAG+TGG - chr5_3:6846072-6846091 Msa0794950:intron 55.0%
GGTGGATGACTCACACTCTC+GGG - chr5_3:6846129-6846148 Msa0794950:CDS 55.0%
GTGGATGACTCACACTCTCG+GGG - chr5_3:6846130-6846149 Msa0794950:CDS 55.0%
! ACGAGAGTGCGAGGGTTACT+GGG - chr5_3:6846314-6846333 Msa0794950:intron 55.0%
CGGGTCTACACACCTCGAAA+AGG + chr5_3:6846603-6846622 None:intergenic 55.0%
TAACGTGGCTGCCTCGTTTC+AGG - chr5_3:6846939-6846958 Msa0794950:CDS 55.0%
ATGGCATGCCCTTACGTTGG+TGG - chr5_3:6847474-6847493 Msa0794950:intron 55.0%
ATGCCACGCACAATCTTGGC+TGG + chr5_3:6850299-6850318 None:intergenic 55.0%
! CAAGCTGTGGAGCATCAGTG+AGG - chr5_3:6850648-6850667 Msa0794950:intron 55.0%
CGTGCATCAGTGCATGGGAA+AGG + chr5_3:6850679-6850698 None:intergenic 55.0%
ACGTGCGTGCATCAGTGCAT+GGG + chr5_3:6850684-6850703 None:intergenic 55.0%
TACGTGCGTGCATCAGTGCA+TGG + chr5_3:6850685-6850704 None:intergenic 55.0%
TGCACGCACGTACTCACACA+CGG - chr5_3:6850693-6850712 Msa0794950:intron 55.0%
CATGACCCAGCTGTCTGTTG+TGG - chr5_3:6850905-6850924 Msa0794950:intron 55.0%
GGGAAGAGGAGGAAATGGGA+TGG - chr5_3:6851350-6851369 Msa0794950:intron 55.0%
! AGTCCCTGGTGTGTATTGGC+TGG - chr5_3:6851802-6851821 Msa0794950:intron 55.0%
TGGCCAGCCAATACACACCA+GGG + chr5_3:6851808-6851827 None:intergenic 55.0%
ATGGCCAGCCAATACACACC+AGG + chr5_3:6851809-6851828 None:intergenic 55.0%
! TTGATTGGCCCGAGTGACCA+GGG + chr5_3:6853249-6853268 None:intergenic 55.0%
! ATTGATTGGCCCGAGTGACC+AGG + chr5_3:6853250-6853269 None:intergenic 55.0%
CCGCAGCTACGTCTAGTGCT+TGG - chr5_3:6845525-6845544 Msa0794950:three_prime_UTR 60.0%
GCGGCTGCGGAAAGTAAGGA+GGG - chr5_3:6845632-6845651 Msa0794950:CDS 60.0%
CCCGCAGGTGATGTTCATCG+AGG - chr5_3:6845662-6845681 Msa0794950:CDS 60.0%
! GACGAGAGTGCGAGGGTTAC+TGG - chr5_3:6846313-6846332 Msa0794950:intron 60.0%
TGGTATGCGAGTCCTGAGGG+AGG - chr5_3:6846538-6846557 Msa0794950:intron 60.0%
CCTCGAAAAGGAGGACACCG+AGG + chr5_3:6846591-6846610 None:intergenic 60.0%
!!! CCTCGGTGTCCTCCTTTTCG+AGG - chr5_3:6846588-6846607 Msa0794950:intron 60.0%
!! GCCCTTACGTTGGTGGCCAT+AGG - chr5_3:6847481-6847500 Msa0794950:intron 60.0%
GCAGGGTGATGCCTCCAAGT+TGG - chr5_3:6848628-6848647 Msa0794950:intron 60.0%
GAAGAGGCAGAGAGGAGGCA+TGG - chr5_3:6848683-6848702 Msa0794950:intron 60.0%
CTGCCAGCCAGAGGAAACCA+AGG + chr5_3:6848720-6848739 None:intergenic 60.0%
GAGATTGGGGACACTGTGGG+CGG + chr5_3:6848806-6848825 None:intergenic 60.0%
AGGCCAGCCAAGATTGTGCG+TGG - chr5_3:6850293-6850312 Msa0794950:intron 60.0%
GCACGCACGTACTCACACAC+GGG - chr5_3:6850694-6850713 Msa0794950:intron 60.0%
! AGGTGTTGTGCCTCTGGCAG+CGG - chr5_3:6850935-6850954 Msa0794950:intron 60.0%
! GATTTTGTGCCCGCTGCCAG+AGG + chr5_3:6850948-6850967 None:intergenic 60.0%
ACCACCGCACTATGGCATGG+CGG + chr5_3:6850970-6850989 None:intergenic 60.0%
TCCACCACCGCACTATGGCA+TGG + chr5_3:6850973-6850992 None:intergenic 60.0%
GGTTAGGCTGCGAGCACTAG+TGG + chr5_3:6851944-6851963 None:intergenic 60.0%
GGCGGCTGCGGAAAGTAAGG+AGG - chr5_3:6845631-6845650 Msa0794950:CDS 65.0%
! AAGGAGGGTGTAGGACCCGC+AGG - chr5_3:6845647-6845666 Msa0794950:CDS 65.0%
! GGTGTTGTGCCTCTGGCAGC+GGG - chr5_3:6850936-6850955 Msa0794950:intron 65.0%
TCCGCCATGCCATAGTGCGG+TGG - chr5_3:6850966-6850985 Msa0794950:intron 65.0%
GCCATGCCATAGTGCGGTGG+TGG - chr5_3:6850969-6850988 Msa0794950:intron 65.0%
GCTCGCAGCCTAACCCTGTC+TGG - chr5_3:6851949-6851968 Msa0794950:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6844954 6853846 6844954 ID=Msa0794950;Name=Msa0794950
chr5_3 mRNA 6844954 6853846 6844954 ID=Msa0794950-mRNA-1;Parent=Msa0794950;Name=Msa0794950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=119|1|1|1|0.85|0.75|8|640|1040
chr5_3 exon 6844954 6845785 6844954 ID=Msa0794950-mRNA-1:exon:2797;Parent=Msa0794950-mRNA-1
chr5_3 exon 6846116 6846175 6846116 ID=Msa0794950-mRNA-1:exon:2796;Parent=Msa0794950-mRNA-1
chr5_3 exon 6846813 6847130 6846813 ID=Msa0794950-mRNA-1:exon:2795;Parent=Msa0794950-mRNA-1
chr5_3 exon 6848131 6848277 6848131 ID=Msa0794950-mRNA-1:exon:2794;Parent=Msa0794950-mRNA-1
chr5_3 exon 6849467 6850304 6849467 ID=Msa0794950-mRNA-1:exon:2793;Parent=Msa0794950-mRNA-1
chr5_3 exon 6851476 6851633 6851476 ID=Msa0794950-mRNA-1:exon:2792;Parent=Msa0794950-mRNA-1
chr5_3 exon 6852191 6853658 6852191 ID=Msa0794950-mRNA-1:exon:2791;Parent=Msa0794950-mRNA-1
chr5_3 exon 6853786 6853846 6853786 ID=Msa0794950-mRNA-1:exon:2790;Parent=Msa0794950-mRNA-1
chr5_3 five_prime_UTR 6853786 6853846 6853786 ID=Msa0794950-mRNA-1:five_prime_utr;Parent=Msa0794950-mRNA-1
chr5_3 five_prime_UTR 6853601 6853658 6853601 ID=Msa0794950-mRNA-1:five_prime_utr;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6852191 6853600 6852191 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6851476 6851633 6851476 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6849467 6850304 6849467 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6848131 6848277 6848131 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6846813 6847130 6846813 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6846116 6846175 6846116 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 CDS 6845594 6845785 6845594 ID=Msa0794950-mRNA-1:cds;Parent=Msa0794950-mRNA-1
chr5_3 three_prime_UTR 6844954 6845593 6844954 ID=Msa0794950-mRNA-1:three_prime_utr;Parent=Msa0794950-mRNA-1
Gene Sequence

>Msa0794950

ATGGATGAAGAATTAGTTGATGAAAGAATTCAGTTAGAGGCTGTTGAGGATTCACAGCGTCAGAACAAAGACGACGTCGTCGTAAAATCCCAATATGATGGTAAAAATGTAGCTGAGGCTGTTAGTGAAGCAGCAGATACATCACAACAACATCCATATGAAACAGTTGAAGAATTAACAGTAAAAAGTTACAATGGTTTTAGTTTTGATATTGGTACTTCTACTACTCAAGTTCAACATAAACATTGGCAGAATCTTTATCAGATTGGAAATAATTCAGGGAATGGGAATTCAATTAGTGATATTGGGTTGATTAGTAGTGGGCCCGCAGCTACGTCTAGTGCTTGGGAGGATGTTGGATCCACCTCGTTTCCGGAGTTATTAGCTAGAAAATCGCATAGTGATGGTCAGAGTAATGCAGTTGAACATTTGGCGGCTGCGGAAAGTAAGGAGGGTGTAGGACCCGCAGGTGATGTTCATCGAGGAATACGGACAAAGATGATATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATACGTTGAAGAGTAAGGGTGTTGTACGTAAAGGTCCAGCTTCTGATCGCGTTTATGTCCAATCTAGAGAGCAAAATCAGACAAAGGCAGGCGGTGATGCGAATCAGAATTGGGGTAAGATCGGCGTTGGTGCAAATAAGAATCAGATGAAGACGAGCACTGATACAAATCAGAAACAAATGAAGACTGGTATTGGTGCTCAGTCAAACTCTAATGTTTCAGTGAACCGTGGTTCCAAGATTGCAAAATTTCCGATTCACAGCGATGCTGCAGTGCCTAAATCTAGCACGACTGAATGTGACGGTGTAACATTGAGAGAATGGTTAAAATCTGGCCAGCGCAAATCAGGCAAAGTGGAAAGTTTAAATATATTTAGGAAAATTGTGGATTTGGTGGATGACTCACACTCTCGGGGAATAGCGTTGCATAACCTTTATCCATCTTACATTAAATTGCTACCATCAAACCAGGTCATGTACATTGGGTTACCTACTCAAAAACAAACGGCAGGTAAAAGGGTGTCCGAGCAAGTAACATCTTCCTCTGTTGATATGGGGTCCAAGAAACAAAAATTTGACGAGAGTGCGAGGGTTACTGGGAGTGACTTGTGTCCTGAGACTGCTAATAATCATGAAGTTCAAATGCCTTCAATTGGATCACAAAATTATCGTAACAGATATGAGGAAGATAACCATTTTTCTGTGTATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTATCTAATTCAGGTCAATTGTCATCTACCAGTAATTCTATATGTGAAAGATGGGAAAATAAGTGGTATGCGAGTCCTGAGGGAGGTTGCACAATATCATCAAACATCTACTGCCTCGGTGTCCTCCTTTTCGAGCTACTAGGTCATTTTGACTCTGAAAGAGCGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAACATCCTAAGGAAGCTGGATTTTGTCTCTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAGGGGAAATCCTACAATCTGAAGTGATTAATGGATTACAGGAGTTGTGTAATGAGGAATTGTCATCATGTATAGACCAAGAAGATGCAGAATCGGAATTGTTATTGCATTTCCTCATCTCATCAAAAGAGAAGAAGCAGGGTGATGCCTCCAAGTTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGAAGAGGCAGAGAGGAGGCATGGCTTAAGAAAATCCTTGGTTTCCTCTGGCTGGCAGAACAATTACTCATGTCAGAAAGAGATTTTGCCTCTTCAAAAGGAAGTTTTGAGTGTAGAAAGACCGCCCACAGTGTCCCCAATCTCCAATACAAATGAACTGAGATTGATGAAAAATATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGATTTCTGAAACAGATGCCACAGATCACCCAGATAAAGATATACTAAGAACTCGCGAGAATTGGTCTGTGACCCAAAAAGGTGGGGAGCAGCATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTACAACAAGCTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCTGCAAATGTTATATGCTCTCTAAGCTTTGACCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTTGAGATGTCAAACAGATCAAAGCTTAGCTGTGTTTGCTGGAATAGCTATATTAAGAACTATCTTGCCTCTACAGACTACGACGGTGTAGTGAAGCTATGGGATGCTAGTACGGGTCAAGAATTTTCTCAATACAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAGAAATTCTTTGGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAATTTTCTGCTCATTCCTCTCATTTGCTTGCCTTTGGATCTGCGAATTACTCAACTTACTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGCTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCATCTACTGATAATTCATTGAAGATCTGGGATCTCAATAAAACCTCTTCGGTTGGTTCATCCACTAGTGCTCGCAGCCTAACCCTGTCTGGACATACTAATGAAAAGAATTTTGTGGGTTTGTCTGTTGCTGATGGATATATTGCATGCGGTTCAGAATCAAACGAGGTTTACACCTACTATAAGTCGCTTCCCATGCCAATTACTTCACACAAGTTTGGATCTATTGATCCCATCTCTGGTAAAGAGACTGATGATGACCATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAAACACGCTTCTTGCTGCCAATTCAAGTGGATGTATAAAAGTGTTACAAATGGTTTAA
Protein sequence

>Msa0794950

MDEELVDERIQLEAVEDSQRQNKDDVVVKSQYDGKNVAEAVSEAADTSQQHPYETVEELTVKSYNGFSFDIGTSTTQVQHKHWQNLYQIGNNSGNGNSISDIGLISSGPAATSSAWEDVGSTSFPELLARKSHSDGQSNAVEHLAAAESKEGVGPAGDVHRGIRTKMISKSGFAEYFIKNTLKSKGVVRKGPASDRVYVQSREQNQTKAGGDANQNWGKIGVGANKNQMKTSTDTNQKQMKTGIGAQSNSNVSVNRGSKIAKFPIHSDAAVPKSSTTECDGVTLREWLKSGQRKSGKVESLNIFRKIVDLVDDSHSRGIALHNLYPSYIKLLPSNQVMYIGLPTQKQTAGKRVSEQVTSSSVDMGSKKQKFDESARVTGSDLCPETANNHEVQMPSIGSQNYRNRYEEDNHFSVYNFGRMSSIPRVSNSGQLSSTSNSICERWENKWYASPEGGCTISSNIYCLGVLLFELLGHFDSERAHIAAMSDLHHRILPPAFLSEHPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCNEELSSCIDQEDAESELLLHFLISSKEKKQGDASKLVEQLECLESDIEEAERRHGLRKSLVSSGWQNNYSCQKEILPLQKEVLSVERPPTVSPISNTNELRLMKNIGHLESAYFSMRSKVQISETDATDHPDKDILRTRENWSVTQKGGEQHKSKDALGTFFDGLCKYARYNKLEVRGILRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNSYIKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIRNVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSVGSSTSARSLTLSGHTNEKNFVGLSVADGYIACGSESNEVYTYYKSLPMPITSHKFGSIDPISGKETDDDHGQFVSSVCWRGKSNTLLAANSSGCIKVLQMV*