AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454710 MtrunA17_Chr3g0121961 98.387 682 11 0 166 847 225 906 0.0 1383
Msa1454710 MtrunA17_Chr3g0121961 94.083 169 7 3 1 168 1 167 1.38e-95 319
Msa1454710 MtrunA17_Chr8g0377971 76.201 874 148 3 34 847 43 916 0.0 1353
Msa1454710 MtrunA17_Chr3g0118521 34.759 374 213 10 488 837 3 369 6.71e-53 189
Msa1454710 MtrunA17_Chr7g0252051 25.577 477 263 11 80 485 81 536 3.97e-38 150
Msa1454710 MtrunA17_Chr6g0461951 25.523 478 264 11 80 486 83 539 3.02e-36 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454710 AT4G19710.2 69.266 885 189 9 44 847 34 916 0.0 1201
Msa1454710 AT1G31230.1 69.732 859 196 6 49 847 57 911 0.0 1181
Msa1454710 AT4G19710.1 67.329 805 180 9 44 767 34 836 0.0 1053
Msa1454710 AT5G21060.3 34.584 373 211 10 493 839 8 373 2.23e-53 190
Msa1454710 AT5G21060.2 34.584 373 211 10 493 839 8 373 2.72e-53 190
Msa1454710 AT5G21060.1 34.133 375 208 11 493 839 8 371 4.87e-53 189
Msa1454710 AT5G13280.1 26.606 545 291 15 19 485 31 544 3.24e-36 145
Msa1454710 AT3G02020.1 25.974 539 303 14 38 502 42 558 1.26e-35 143
Msa1454710 AT5G14060.1 25.826 484 263 13 76 485 81 542 2.26e-34 139
Msa1454710 AT5G14060.2 25.826 484 263 13 76 485 81 542 2.26e-34 139
Msa1454710 AT5G14060.3 26.882 372 199 9 76 385 81 441 1.48e-26 114

Find 186 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTTCTTACTCTTAA+TGG 0.142845 tig0035382:-16359 None:intergenic
GAAAACTCCTCGTCAAATTT+TGG 0.147615 tig0035382:-16491 None:intergenic
ATAATTGGACCTGGATTAAT+TGG 0.182484 tig0035382:+14099 Msa1454710:CDS
CAATTATGGGCGCGATATTC+AGG 0.184677 tig0035382:+12236 Msa1454710:CDS
CATCTTGTGCAGTCTTATTT+TGG 0.195740 tig0035382:+12670 Msa1454710:intron
TGACTTCTCTGCAGCAATTA+TGG 0.206581 tig0035382:+12222 Msa1454710:CDS
AAAATATTCCTTATTATAAT+TGG 0.206918 tig0035382:-12745 None:intergenic
ACCATGGCAATGGGCATAAT+TGG 0.214004 tig0035382:+14084 Msa1454710:CDS
CATTTCAAATTGCAGTATTT+TGG 0.217640 tig0035382:+13495 Msa1454710:CDS
AAGATACACTCTTCACTTAC+AGG 0.239554 tig0035382:+9794 Msa1454710:CDS
ACATGGTCAGTTCACAAATT+TGG 0.240332 tig0035382:+9967 Msa1454710:CDS
CATCCATTTGCACAATTATC+TGG 0.246596 tig0035382:+16725 Msa1454710:CDS
TTTGACAGCGCTTTGTTTGC+TGG 0.257116 tig0035382:+13298 Msa1454710:CDS
TTCCCATTATTGGCACTTTA+CGG 0.257376 tig0035382:+15488 Msa1454710:CDS
CCCTATGCTTCTAGTATTTG+AGG 0.258311 tig0035382:+15401 Msa1454710:intron
GGAGCCGGTCTTCCCATTAT+TGG 0.267035 tig0035382:+15478 Msa1454710:CDS
GGCAGCTGTTGGCCAGAAAA+TGG 0.279914 tig0035382:+13516 Msa1454710:CDS
ACTGACCATGTTTCTCCTTT+TGG 0.282626 tig0035382:-9955 None:intergenic
ATAATTCTTGCAAGGGAATC+TGG 0.292875 tig0035382:+16287 Msa1454710:CDS
ACTGGAATGGCTGGTGTTCC+AGG 0.296123 tig0035382:+13036 Msa1454710:CDS
AACATTGATTTGCGTGTAAT+GGG 0.300206 tig0035382:+14367 Msa1454710:CDS
CTGAACAAAGACTTAATAAA+TGG 0.300282 tig0035382:+12107 Msa1454710:CDS
TCCCATTATTGGCACTTTAC+GGG 0.305246 tig0035382:+15489 Msa1454710:CDS
AAAAGGTGAAGCGGCTGATT+TGG 0.310156 tig0035382:+14936 Msa1454710:CDS
GCTAGACCTTTCTGATATTC+CGG 0.325511 tig0035382:+16316 Msa1454710:CDS
ATGGCATACCAATTATAATA+AGG 0.331452 tig0035382:+12737 Msa1454710:CDS
TTACGACTTGCCTCGTATCT+TGG 0.336666 tig0035382:+16860 Msa1454710:CDS
TGCAAATTGAAGGCATCTTC+AGG 0.337279 tig0035382:+15539 Msa1454710:CDS
TGGAAAATGTGGACGGGAAA+TGG 0.341140 tig0035382:-9550 None:intergenic
TGTTCAGTTTCCAAGTAATC+AGG 0.346596 tig0035382:-12091 None:intergenic
TCTTAGTGTAACATTAGTTC+TGG 0.347448 tig0035382:+16953 Msa1454710:three_prime_UTR
GACTTCTCTGCAGCAATTAT+GGG 0.347805 tig0035382:+12223 Msa1454710:CDS
GAAGAGTGTATCTTGATTCT+TGG 0.348004 tig0035382:-9785 None:intergenic
GTTCTTACTCTTAATGGTTC+CGG 0.356717 tig0035382:-16353 None:intergenic
GCCCCGTAAAGTGCCAATAA+TGG 0.358952 tig0035382:-15491 None:intergenic
TTGGCACTTGTAAATGTAGA+AGG 0.362262 tig0035382:+12874 Msa1454710:CDS
TAAGCGAGAGGATTCTATAA+AGG 0.363103 tig0035382:+14020 Msa1454710:CDS
AAACATTGATTTGCGTGTAA+TGG 0.370904 tig0035382:+14366 Msa1454710:CDS
GTTTGCTGGGCGTATTTCTC+AGG 0.372575 tig0035382:+13312 Msa1454710:CDS
GTACTCTCTTAATCCATCTA+AGG 0.379996 tig0035382:+12129 Msa1454710:CDS
TTACGGGGCCTTCTCGAAAC+TGG 0.387949 tig0035382:+15505 Msa1454710:CDS
TCATCACAAAGATTATATTA+TGG 0.390808 tig0035382:-17090 None:intergenic
AAGAAAGGGATCAAATTAGA+TGG 0.403070 tig0035382:-16931 None:intergenic
TTACATCTTTAATAACTTCA+AGG 0.405718 tig0035382:+15792 Msa1454710:CDS
TCAAGTTGATCCTGATTACT+TGG 0.406704 tig0035382:+12081 Msa1454710:CDS
TTGACAGCGCTTTGTTTGCT+GGG 0.407848 tig0035382:+13299 Msa1454710:CDS
AAAAGGGTGGCGCTAACTCC+TGG 0.409823 tig0035382:-13547 None:intergenic
GTGACTTGTGCACCAGCTCC+TGG 0.411867 tig0035382:-16812 None:intergenic
CCCCGTAAAGTGCCAATAAT+GGG 0.412176 tig0035382:-15490 None:intergenic
TGATGATTCTGAGAGAAAAT+TGG 0.414922 tig0035382:+10047 Msa1454710:CDS
CTCACTCACTCACTGCCAAA+TGG 0.418444 tig0035382:+9473 Msa1454710:exon
GTAGCAATGACTACCTTAGA+TGG 0.420146 tig0035382:-12142 None:intergenic
AGAGAAATTCGAGAGGAAAA+AGG 0.432621 tig0035382:+14919 Msa1454710:CDS
ACGGCACAAGAATTGTTTGA+TGG 0.436063 tig0035382:+10189 Msa1454710:CDS
TGGATCACATTCACATTCAC+GGG 0.441993 tig0035382:-9513 None:intergenic
CAAGAAGAGGCTGACACTGC+TGG 0.444680 tig0035382:+16521 Msa1454710:CDS
CTTTGTGATGATATATATCT+TGG 0.444767 tig0035382:+17102 Msa1454710:three_prime_UTR
GGTTTGTGAGTTATAAAATC+TGG 0.444825 tig0035382:-14061 None:intergenic
TGAAGAGAAGCATAGCTTAA+CGG 0.451830 tig0035382:+10170 Msa1454710:CDS
GGGCTCGTCAAGTCACCATC+TGG 0.454539 tig0035382:+12257 Msa1454710:CDS
CAGAAAATGGCAAGTACTCC+AGG 0.457783 tig0035382:+13529 Msa1454710:CDS
CAGTCTACTAAAACCGTGTT+TGG 0.459411 tig0035382:-14997 None:intergenic
CATCCACAAGGCTGAAGCTC+AGG 0.460872 tig0035382:+10116 Msa1454710:CDS
AAAAGCAAAACAAAACCATT+TGG 0.461534 tig0035382:-9488 None:intergenic
GACAGATCATCCCTTGGATC+TGG 0.468935 tig0035382:-15871 None:intergenic
ATCATAATGGCTTGCTATGA+CGG 0.470144 tig0035382:-15031 None:intergenic
TGCGCAACCAGTCATCATAA+TGG 0.471009 tig0035382:-15044 None:intergenic
GAGCCAGATAATTGTGCAAA+TGG 0.471377 tig0035382:-16728 None:intergenic
GGTATGCCATAGCGAATAAC+CGG 0.477121 tig0035382:-12724 None:intergenic
CCCATTATTGGCACTTTACG+GGG 0.477220 tig0035382:+15490 Msa1454710:CDS
CCTGAGCCAATGCATTGAAA+AGG 0.477917 tig0035382:-13564 None:intergenic
TCTAAGGTAGTCATTGCTAC+TGG 0.479941 tig0035382:+12145 Msa1454710:CDS
CAATGTTATTATGATATCTC+AGG 0.481310 tig0035382:+13101 Msa1454710:CDS
TCACAAACCACCATGGCAAT+GGG 0.486399 tig0035382:+14075 Msa1454710:CDS
AATCTTCTTCACATTCCCTC+AGG 0.486767 tig0035382:+9595 Msa1454710:CDS
TTTAGCGCAGTAAAAGAGGT+TGG 0.488466 tig0035382:+13075 Msa1454710:CDS
GACAAAATATTGCAAATTGA+AGG 0.491595 tig0035382:+15529 Msa1454710:CDS
GTGGATCACATTCACATTCA+CGG 0.493781 tig0035382:-9514 None:intergenic
TTTGCGTGTAATGGGGATCA+TGG 0.494518 tig0035382:+14375 Msa1454710:CDS
TAATGTTACACTAAGAAGAA+AGG 0.494640 tig0035382:-16946 None:intergenic
ATCTTTAATAACTTCAAGGA+TGG 0.496607 tig0035382:+15796 Msa1454710:CDS
GGTAGACGTAACGAATCAAA+AGG 0.497790 tig0035382:+16670 Msa1454710:CDS
AAAATAGTACTGGCGGTACC+TGG 0.498155 tig0035382:-13054 None:intergenic
GGGAAATGGAGAAGAAAGAT+TGG 0.498379 tig0035382:-9536 None:intergenic
AATGTTACACTAAGAAGAAA+GGG 0.498554 tig0035382:-16945 None:intergenic
GGATTCTATAAAGGCTCTGC+GGG 0.501469 tig0035382:+14029 Msa1454710:CDS
AATAGAAGGATAGCAGATCT+TGG 0.503861 tig0035382:-12788 None:intergenic
TATCCTGAGCTTCAGCCTTG+TGG 0.505692 tig0035382:-10119 None:intergenic
ACCATCTGGACCGACGTTGA+TGG 0.507631 tig0035382:+12271 Msa1454710:CDS
GTTGCTGAAGCAAAGGAAGC+AGG 0.509400 tig0035382:+15838 Msa1454710:CDS
GATCCAAGGGATGATCTGTC+TGG 0.511718 tig0035382:+15874 Msa1454710:CDS
ACTTGATCAGCTAAGGGATC+AGG 0.512149 tig0035382:+14131 Msa1454710:CDS
TCCAATTATGCCCATTGCCA+TGG 0.512803 tig0035382:-14085 None:intergenic
AATTATGGGCGCGATATTCA+GGG 0.512887 tig0035382:+12237 Msa1454710:CDS
TTCAGTGGATGTAGCTGTAG+AGG 0.513210 tig0035382:+9921 Msa1454710:CDS
TCCGGTTGAAAATCTTGTGC+CGG 0.514423 tig0035382:+16334 Msa1454710:CDS
TATCAGCCTCTGATAGTTCG+TGG 0.514794 tig0035382:+16788 Msa1454710:CDS
CACTGTCTTATCAAGAGGCA+TGG 0.517169 tig0035382:+12564 Msa1454710:CDS
ATTAGTCCGGTTATTCGCTA+TGG 0.518084 tig0035382:+12718 Msa1454710:CDS
CCTCTGATAGTTCGTGGACC+AGG 0.519247 tig0035382:+16794 Msa1454710:CDS
GTGAGTTATAAAATCTGGAA+TGG 0.520693 tig0035382:-14056 None:intergenic
AAAAGCTGTAGCTGAGGTGT+TGG 0.521132 tig0035382:+13267 Msa1454710:CDS
CTGAGCCAATGCATTGAAAA+GGG 0.524842 tig0035382:-13563 None:intergenic
GCACACTACTTGATCAGCTA+AGG 0.525209 tig0035382:+14124 Msa1454710:CDS
TGGAACTGATGTTGCAAGAA+AGG 0.525559 tig0035382:+15894 Msa1454710:CDS
CTTGGTGAGACTTTCCTCCA+TGG 0.526328 tig0035382:-9767 None:intergenic
GAAGACACTGTCTTATCAAG+AGG 0.529922 tig0035382:+12559 Msa1454710:CDS
CTCACAAACCACCATGGCAA+TGG 0.532523 tig0035382:+14074 Msa1454710:CDS
AAATTTGGTGGAACATGTGT+TGG 0.532530 tig0035382:+9982 Msa1454710:CDS
TAATTGGACCTGGATTAATT+GGG 0.533041 tig0035382:+14100 Msa1454710:CDS
CCATCTCTCTTGAGAGTAGT+GGG 0.533662 tig0035382:-12196 None:intergenic
CTTTACAACGATAGACAACT+TGG 0.533740 tig0035382:+12855 Msa1454710:CDS
ATAGTTCGTGGACCAGGAGC+TGG 0.533819 tig0035382:+16800 Msa1454710:CDS
ACATCCACGCACAATTAGTC+CGG 0.537690 tig0035382:+12705 Msa1454710:CDS
TAGCAAGCCATTATGATGAC+TGG 0.539173 tig0035382:+15037 Msa1454710:CDS
TATAGCAAGGATATTTATGT+TGG 0.541082 tig0035382:-13959 None:intergenic
TATAGTGCAGATCCTAGAAA+AGG 0.542051 tig0035382:+12298 Msa1454710:CDS
TACAGGTGATAATTCTTGCA+AGG 0.542908 tig0035382:+16279 Msa1454710:intron
ATATTAAAAGATTATGTCAA+AGG 0.543405 tig0035382:+12832 Msa1454710:CDS
AATTATGCCCATTGCCATGG+TGG 0.544162 tig0035382:-14082 None:intergenic
AGTGCCAATAATGGGAAGAC+CGG 0.544262 tig0035382:-15482 None:intergenic
TGGTCAGTTCACAAATTTGG+TGG 0.549254 tig0035382:+9970 Msa1454710:CDS
TCCATCTCTCTTGAGAGTAG+TGG 0.550339 tig0035382:-12197 None:intergenic
TGAGGTTGAGAGCTCTTCAA+AGG 0.554081 tig0035382:+15419 Msa1454710:CDS
TTTCAACCGGAATATCAGAA+AGG 0.555395 tig0035382:-16322 None:intergenic
TGAGGTAGTTGCTGAAGCAA+AGG 0.555717 tig0035382:+15831 Msa1454710:CDS
ATTTGACTTACAAATCATCA+AGG 0.556857 tig0035382:-14414 None:intergenic
TACTGTTGTTCTTAAGCGAG+AGG 0.558979 tig0035382:+14008 Msa1454710:CDS
AGTGTGCTCCCAATTAATCC+AGG 0.560803 tig0035382:-14108 None:intergenic
GCTGGTGCACAAGTCACAGC+TGG 0.561903 tig0035382:+16818 Msa1454710:CDS
ACAGGTGATAATTCTTGCAA+GGG 0.563545 tig0035382:+16280 Msa1454710:intron
CCCACTACTCTCAAGAGAGA+TGG 0.565006 tig0035382:+12196 Msa1454710:CDS
TTATCAAGAGGCATGGGAGA+TGG 0.567207 tig0035382:+12571 Msa1454710:CDS
TATGAAGCTACTGTTGGAGC+CGG 0.567702 tig0035382:+15463 Msa1454710:CDS
GGTATTGAGATACGTGGGAG+TGG 0.569260 tig0035382:+16649 Msa1454710:intron
TTATGATGACTGGTTGCGCA+AGG 0.569745 tig0035382:+15047 Msa1454710:CDS
AGAAGTAAAAGCTGTAGCTG+AGG 0.575535 tig0035382:+13261 Msa1454710:CDS
CTGAGATATCATAATAACAT+TGG 0.576835 tig0035382:-13100 None:intergenic
AACAACCTTGTGCTATAGCA+AGG 0.580471 tig0035382:-13972 None:intergenic
AGCATTGCAGATTAACTACA+AGG 0.581807 tig0035382:+17019 Msa1454710:three_prime_UTR
ACCATCAACGTCGGTCCAGA+TGG 0.582380 tig0035382:-12272 None:intergenic
TTGCGTGTAATGGGGATCAT+GGG 0.583341 tig0035382:+14376 Msa1454710:CDS
GGTGCACAAGTCACAGCTGG+TGG 0.583364 tig0035382:+16821 Msa1454710:CDS
TTGTTGTGGCGTGGAAAATG+TGG 0.586339 tig0035382:-9561 None:intergenic
GATCTTGGTTCCAGAAGCAG+AGG 0.589515 tig0035382:-12773 None:intergenic
GTTCCAGACAGATCATCCCT+TGG 0.593893 tig0035382:-15877 None:intergenic
AAATGGAGAAGAAAGATTGG+TGG 0.597550 tig0035382:-9533 None:intergenic
ATCGCATTTACCTCACTAAG+TGG 0.597865 tig0035382:-15111 None:intergenic
GCAATGGGCATAATTGGACC+TGG 0.598231 tig0035382:+14090 Msa1454710:CDS
ACTGTCTTATCAAGAGGCAT+GGG 0.602739 tig0035382:+12565 Msa1454710:CDS
GGGGAATCGACTTAGTAAAG+TGG 0.602813 tig0035382:+14896 Msa1454710:intron
CACACTACTTGATCAGCTAA+GGG 0.604044 tig0035382:+14125 Msa1454710:CDS
GTTATACTGAACCAGATCCA+AGG 0.604842 tig0035382:+15860 Msa1454710:CDS
GGAATGTGAAGAAGATTGAA+AGG 0.609635 tig0035382:-9589 None:intergenic
ATTGAAAGGTGAAGTTGTTG+TGG 0.609959 tig0035382:-9575 None:intergenic
AAATCATGTTATACCAAACA+CGG 0.611522 tig0035382:+14984 Msa1454710:CDS
TGGCACTTGTAAATGTAGAA+GGG 0.620113 tig0035382:+12875 Msa1454710:CDS
TTGAAGGTATTGAGATACGT+GGG 0.620162 tig0035382:+16644 Msa1454710:intron
TTATACTGAACCAGATCCAA+GGG 0.626685 tig0035382:+15861 Msa1454710:CDS
GTAGACGTAACGAATCAAAA+GGG 0.627263 tig0035382:+16671 Msa1454710:CDS
ACATTGATTTGCGTGTAATG+GGG 0.630578 tig0035382:+14368 Msa1454710:CDS
AAAGTGGAGAGAAATTCGAG+AGG 0.631796 tig0035382:+14912 Msa1454710:CDS
CGTAACGAATCAAAAGGGAA+TGG 0.634389 tig0035382:+16676 Msa1454710:CDS
CGAGCTACGAAGATACAAGA+AGG 0.634713 tig0035382:+16700 Msa1454710:CDS
TATGATGACTGGTTGCGCAA+GGG 0.635447 tig0035382:+15048 Msa1454710:CDS
AAGGTGAAGTTGTTGTGGCG+TGG 0.636050 tig0035382:-9570 None:intergenic
AAATTTGTTCAACATGTACA+CGG 0.636911 tig0035382:+14961 Msa1454710:CDS
CCTGGTCCACGAACTATCAG+AGG 0.638898 tig0035382:-16794 None:intergenic
AAATTCAGGACCACTTAGTG+AGG 0.640316 tig0035382:+15101 Msa1454710:CDS
TCAACTTGATCAGCACGAGT+AGG 0.640482 tig0035382:-12067 None:intergenic
AATATCCTTGCTATAGCACA+AGG 0.642453 tig0035382:+13967 Msa1454710:CDS
GTGGCGTGGAAAATGTGGAC+GGG 0.645608 tig0035382:-9556 None:intergenic
TTTGAAGGTATTGAGATACG+TGG 0.650454 tig0035382:+16643 Msa1454710:intron
AGCCAATGCATTGAAAAGGG+TGG 0.652774 tig0035382:-13560 None:intergenic
CACGAGTAGGATTTACAATG+AGG 0.660532 tig0035382:-12054 None:intergenic
AGCTACCAAAAGGAGAAACA+TGG 0.661800 tig0035382:+9950 Msa1454710:CDS
TGATTCTGAGAGAAAATTGG+TGG 0.666882 tig0035382:+10050 Msa1454710:CDS
AGGATTCTATAAAGGCTCTG+CGG 0.673860 tig0035382:+14028 Msa1454710:CDS
TTATAACTCACAAACCACCA+TGG 0.674251 tig0035382:+14068 Msa1454710:CDS
AGACGGAGCACCAAGATACG+AGG 0.682883 tig0035382:-16870 None:intergenic
ATAACCGGACTAATTGTGCG+TGG 0.684824 tig0035382:-12709 None:intergenic
GATGTATGATCTCATCCACA+AGG 0.691167 tig0035382:+10104 Msa1454710:CDS
ACTATACACACCATCAACGT+CGG 0.693688 tig0035382:-12281 None:intergenic
GAAATTACCAAAATTTGACG+AGG 0.695620 tig0035382:+16484 Msa1454710:CDS
TGTGGCGTGGAAAATGTGGA+CGG 0.699920 tig0035382:-9557 None:intergenic
GGATCACATTCACATTCACG+GGG 0.741804 tig0035382:-9512 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAATTTAAAAAATTT+CGG + tig0035382:10791-10810 Msa1454710:intron 0.0%
!! TAAATAAATAGATAGTTATT+TGG - tig0035382:10748-10767 None:intergenic 10.0%
!! AAAAAAAAAAGACAATAATT+AGG - tig0035382:11534-11553 None:intergenic 10.0%
!! AAAATATTCCTTATTATAAT+TGG - tig0035382:12748-12767 None:intergenic 10.0%
!! TCAACATAATAAAAAAATTA+AGG + tig0035382:15176-15195 Msa1454710:intron 10.0%
!! TTATGTTAAAACAAAAATTA+TGG + tig0035382:15260-15279 Msa1454710:intron 10.0%
!! TTTGTAGTATTTAGTAAAAT+TGG - tig0035382:10608-10627 None:intergenic 15.0%
!! ATATTAAAAGATTATGTCAA+AGG + tig0035382:12832-12851 Msa1454710:CDS 15.0%
!! TATTCTAAACTTAACAAAAA+CGG - tig0035382:13606-13625 None:intergenic 15.0%
!!! CTCTATTAGTAATTTTAATT+TGG + tig0035382:14834-14853 Msa1454710:intron 15.0%
!! ATGTGGTATATATATAGTTA+AGG - tig0035382:9653-9672 None:intergenic 20.0%
!! AATTATAAGTTATAAGCTAC+AGG - tig0035382:10479-10498 None:intergenic 20.0%
!! AATAGATAGTTATTTGGTTA+AGG - tig0035382:10742-10761 None:intergenic 20.0%
!!! TAAAAAATTTCGGCTTTATT+TGG + tig0035382:10801-10820 Msa1454710:intron 20.0%
!!! GAAGTGTTTAGTAAAATTAA+CGG + tig0035382:10880-10899 Msa1454710:intron 20.0%
!!! TTTTTCTTATTTTTTCGTGT+TGG - tig0035382:11424-11443 None:intergenic 20.0%
!!! AACGACAAATATTTTTGATA+TGG + tig0035382:11447-11466 Msa1454710:intron 20.0%
!! TTGTCTTACTTAAAATTCTT+TGG + tig0035382:11565-11584 Msa1454710:intron 20.0%
!!! CTATGTTAAGCTTAATTTTT+TGG + tig0035382:11628-11647 Msa1454710:intron 20.0%
!!! AAAGAAAGAAGTATTTATCA+TGG + tig0035382:11654-11673 Msa1454710:intron 20.0%
!!! TATTAAGTGTGTTATTAGTT+GGG - tig0035382:11734-11753 None:intergenic 20.0%
!!! TATTTTTTATCTTAACCCTA+TGG - tig0035382:11945-11964 None:intergenic 20.0%
!!! TCTTCATTTTCAATAATAGA+AGG - tig0035382:12805-12824 None:intergenic 20.0%
!! TAAAGTAATAGAATTTCGAT+GGG + tig0035382:13699-13718 Msa1454710:intron 20.0%
!! AAATCAGGTGAAATATATTA+AGG + tig0035382:13803-13822 Msa1454710:intron 20.0%
!! AAATATATTAAGGAAGAAGA+GGG + tig0035382:13813-13832 Msa1454710:intron 20.0%
!!! AAGGAAATGTTTTAATATGT+TGG + tig0035382:13875-13894 Msa1454710:intron 20.0%
!!! TGCTTTCAAGTATTATAAAT+TGG + tig0035382:14204-14223 Msa1454710:intron 20.0%
!! ACAAGTATTATGTTTATGTA+GGG + tig0035382:14258-14277 Msa1454710:intron 20.0%
!! ACATGAATTAATCTATCAAT+CGG - tig0035382:14306-14325 None:intergenic 20.0%
!! TTACATCTTTAATAACTTCA+AGG + tig0035382:15792-15811 Msa1454710:CDS 20.0%
!! TCATCACAAAGATTATATTA+TGG - tig0035382:17093-17112 None:intergenic 20.0%
! AAAAGCAAAACAAAACCATT+TGG - tig0035382:9491-9510 None:intergenic 25.0%
!!! TTTATGCTTTTAGTTTACCA+TGG + tig0035382:9750-9769 Msa1454710:intron 25.0%
! TCAAGATGTTGGAAATTTAA+AGG + tig0035382:10245-10264 Msa1454710:intron 25.0%
! AAGCTCGTAATAATAAATCA+AGG - tig0035382:10395-10414 None:intergenic 25.0%
!! CTTTATTTGGTAAAAAGTAG+TGG + tig0035382:10814-10833 Msa1454710:intron 25.0%
!! ACAAAATTGTTAGCTTATAG+AGG - tig0035382:10969-10988 None:intergenic 25.0%
!! TGATACATATTTACCTGTTT+TGG + tig0035382:11149-11168 Msa1454710:intron 25.0%
! TGTTAAGATTTCATGATTGA+TGG + tig0035382:11266-11285 Msa1454710:intron 25.0%
!! TGTTGCTTAAAAGAAATTTC+TGG + tig0035382:11699-11718 Msa1454710:intron 25.0%
!! GTATTAAGTGTGTTATTAGT+TGG - tig0035382:11735-11754 None:intergenic 25.0%
!!! ATTGTCTTTTGTTGTTAAGA+AGG + tig0035382:11829-11848 Msa1454710:intron 25.0%
! CTGAACAAAGACTTAATAAA+TGG + tig0035382:12107-12126 Msa1454710:CDS 25.0%
! TAAATGAAGAATAAATGCCA+TGG - tig0035382:12423-12442 None:intergenic 25.0%
!! GTTAATCTCCTGAATTTTAA+GGG - tig0035382:12640-12659 None:intergenic 25.0%
!! AGTTAATCTCCTGAATTTTA+AGG - tig0035382:12641-12660 None:intergenic 25.0%
! ATGGCATACCAATTATAATA+AGG + tig0035382:12737-12756 Msa1454710:CDS 25.0%
! CATTATAGTCTACAACATTT+GGG - tig0035382:12990-13009 None:intergenic 25.0%
! ACATTATAGTCTACAACATT+TGG - tig0035382:12991-13010 None:intergenic 25.0%
!!! ATTGTTTTGTTTTGTAGAAC+TGG + tig0035382:13018-13037 Msa1454710:intron 25.0%
! CTGAGATATCATAATAACAT+TGG - tig0035382:13103-13122 None:intergenic 25.0%
! CAATGTTATTATGATATCTC+AGG + tig0035382:13101-13120 Msa1454710:CDS 25.0%
! TGAACAAAAGAAGAAGAATT+TGG - tig0035382:13389-13408 None:intergenic 25.0%
!! CATTTCAAATTGCAGTATTT+TGG + tig0035382:13495-13514 Msa1454710:CDS 25.0%
! CTAAAGTAATAGAATTTCGA+TGG + tig0035382:13698-13717 Msa1454710:intron 25.0%
! GAAATATATTAAGGAAGAAG+AGG + tig0035382:13812-13831 Msa1454710:intron 25.0%
! AATATATTAAGGAAGAAGAG+GGG + tig0035382:13814-13833 Msa1454710:intron 25.0%
! AAGATATCAAAGAAAGATGA+AGG + tig0035382:13856-13875 Msa1454710:intron 25.0%
!!! TCATTTGTCTAACTTGTTTA+TGG + tig0035382:13914-13933 Msa1454710:intron 25.0%
! TATAGCAAGGATATTTATGT+TGG - tig0035382:13962-13981 None:intergenic 25.0%
! CTACATAAACATAATACTTG+TGG - tig0035382:14259-14278 None:intergenic 25.0%
! CACAAGTATTATGTTTATGT+AGG + tig0035382:14257-14276 Msa1454710:intron 25.0%
! CATGAATTAATCTATCAATC+GGG - tig0035382:14305-14324 None:intergenic 25.0%
!! TTTATCTTTTTGTTACACTC+AGG - tig0035382:14529-14548 None:intergenic 25.0%
!! GAATGAAACAAACACATTTT+TGG + tig0035382:14692-14711 Msa1454710:intron 25.0%
!!! ACACATTTTTGGAAAGTTAT+TGG + tig0035382:14703-14722 Msa1454710:intron 25.0%
! TAAAATTACTAATAGAGCAG+AGG - tig0035382:14831-14850 None:intergenic 25.0%
! AACTATAGTTTCTTATTGCA+GGG + tig0035382:14876-14895 Msa1454710:intron 25.0%
!! AAATTTGTTCAACATGTACA+CGG + tig0035382:14961-14980 Msa1454710:CDS 25.0%
! AAATCATGTTATACCAAACA+CGG + tig0035382:14984-15003 Msa1454710:CDS 25.0%
! GACAAAATATTGCAAATTGA+AGG + tig0035382:15529-15548 Msa1454710:CDS 25.0%
! AAATTCAAAGTAGCAATTCA+AGG + tig0035382:15683-15702 Msa1454710:intron 25.0%
!!! TATTACTTCTGATTTTTCAG+TGG + tig0035382:15760-15779 Msa1454710:intron 25.0%
!!! ATTACTTCTGATTTTTCAGT+GGG + tig0035382:15761-15780 Msa1454710:intron 25.0%
! ATCTTTAATAACTTCAAGGA+TGG + tig0035382:15796-15815 Msa1454710:CDS 25.0%
! AAAACTGTGAGAATAAAATG+TGG - tig0035382:15946-15965 None:intergenic 25.0%
! CAAGCTTATACATAAATTTG+AGG - tig0035382:16023-16042 None:intergenic 25.0%
!! ATTTGATTTCAAGCTTAGAA+TGG + tig0035382:16063-16082 Msa1454710:intron 25.0%
!! GTGTATTTCAAATGTTTCTA+AGG - tig0035382:16112-16131 None:intergenic 25.0%
!!! AAATACACAAGTTGATTTCA+TGG + tig0035382:16124-16143 Msa1454710:intron 25.0%
! AACTGCATAATTCATGAAAT+CGG - tig0035382:16378-16397 None:intergenic 25.0%
!! TGGAAAAACTAATAGTTTGT+AGG - tig0035382:16577-16596 None:intergenic 25.0%
! ATACTATGAAGAAAATGTCA+TGG - tig0035382:16600-16619 None:intergenic 25.0%
! AGAACATTTGTAATGTTTGA+AGG + tig0035382:16628-16647 Msa1454710:intron 25.0%
! AATGTTACACTAAGAAGAAA+GGG - tig0035382:16948-16967 None:intergenic 25.0%
! TAATGTTACACTAAGAAGAA+AGG - tig0035382:16949-16968 None:intergenic 25.0%
! CTTTGTGATGATATATATCT+TGG + tig0035382:17102-17121 Msa1454710:three_prime_UTR 25.0%
GTAAAAGAAAAGATACCTGA+GGG - tig0035382:9613-9632 None:intergenic 30.0%
AGTAAAAGAAAAGATACCTG+AGG - tig0035382:9614-9633 None:intergenic 30.0%
TTGTTGAGCATTTATTCATG+TGG - tig0035382:9670-9689 None:intergenic 30.0%
AAAACAAGAAAATGCAGTGA+AGG - tig0035382:9729-9748 None:intergenic 30.0%
!! GTCTTTATCAGATTTTTCAG+TGG + tig0035382:9906-9925 Msa1454710:intron 30.0%
! TGATGATTCTGAGAGAAAAT+TGG + tig0035382:10047-10066 Msa1454710:CDS 30.0%
TCAAATTTGCATCAAGATGT+TGG + tig0035382:10234-10253 Msa1454710:intron 30.0%
AAAACAACAGAACAAAAGAG+AGG - tig0035382:10300-10319 None:intergenic 30.0%
TTCTTTCTTTAGTCTCTGTT+TGG + tig0035382:10318-10337 Msa1454710:intron 30.0%
! CACAAATAAGCTAGTTGATA+GGG - tig0035382:10650-10669 None:intergenic 30.0%
ACACAAATAAGCTAGTTGAT+AGG - tig0035382:10651-10670 None:intergenic 30.0%
!! TATTTGGTTAAGGCTTTGTT+TGG - tig0035382:10732-10751 None:intergenic 30.0%
AAAAGTAGATACAGACACTA+AGG - tig0035382:11005-11024 None:intergenic 30.0%
! AGAACAAAAGTGTAAGTATC+TGG + tig0035382:11094-11113 Msa1454710:intron 30.0%
CAAATCAGAAAGAACAAAGA+TGG - tig0035382:11121-11140 None:intergenic 30.0%
CATCTTTGTTCTTTCTGATT+TGG + tig0035382:11119-11138 Msa1454710:intron 30.0%
ACCTCAGGTCTAAATAAAAA+GGG - tig0035382:11485-11504 None:intergenic 30.0%
AACCTCAGGTCTAAATAAAA+AGG - tig0035382:11486-11505 None:intergenic 30.0%
TCACAATTAAGAAAAACCTC+AGG - tig0035382:11500-11519 None:intergenic 30.0%
GACAATAATTAGGAGTTAAC+AGG - tig0035382:11524-11543 None:intergenic 30.0%
TACTTAAAATTCTTTGGCTG+AGG + tig0035382:11571-11590 Msa1454710:intron 30.0%
TAGGTAGAACAATTCTTATC+CGG + tig0035382:11865-11884 Msa1454710:intron 30.0%
CATCATATAATATCCACTGA+TGG - tig0035382:12358-12377 None:intergenic 30.0%
CATCAGTGGATATTATATGA+TGG + tig0035382:12356-12375 Msa1454710:intron 30.0%
ACTTATATCGATACATACCA+TGG + tig0035382:12403-12422 Msa1454710:intron 30.0%
!!! TTTGTTTTGTAGAACTGGAA+TGG + tig0035382:13023-13042 Msa1454710:intron 30.0%
!!! TATTTTTAGCGCAGTAAAAG+AGG + tig0035382:13071-13090 Msa1454710:CDS 30.0%
ATGTAACTGTGGATAAACAA+GGG - tig0035382:13155-13174 None:intergenic 30.0%
CAATTTCATACATGTAACTG+TGG - tig0035382:13166-13185 None:intergenic 30.0%
ATGTTTAACTGTGTTTGTGT+AGG + tig0035382:13198-13217 Msa1454710:intron 30.0%
!!! AGTTGTTTTTTGACAAGAAG+TGG - tig0035382:13433-13452 None:intergenic 30.0%
AGAGAAACAAGTCTTAAATC+AGG + tig0035382:13788-13807 Msa1454710:intron 30.0%
GTCAAACTTGTAAATGAAAC+AGG + tig0035382:13936-13955 Msa1454710:intron 30.0%
GTGAGTTATAAAATCTGGAA+TGG - tig0035382:14059-14078 None:intergenic 30.0%
GGTTTGTGAGTTATAAAATC+TGG - tig0035382:14064-14083 None:intergenic 30.0%
ATAATTGGACCTGGATTAAT+TGG + tig0035382:14099-14118 Msa1454710:CDS 30.0%
TAATTGGACCTGGATTAATT+GGG + tig0035382:14100-14119 Msa1454710:CDS 30.0%
!!! CATGTAACATTTTTTCATGC+AGG + tig0035382:14321-14340 Msa1454710:intron 30.0%
!! AAACATTGATTTGCGTGTAA+TGG + tig0035382:14366-14385 Msa1454710:CDS 30.0%
!! AACATTGATTTGCGTGTAAT+GGG + tig0035382:14367-14386 Msa1454710:CDS 30.0%
GTTAATTCCTTAGCATTCAA+GGG - tig0035382:14455-14474 None:intergenic 30.0%
TGTTAATTCCTTAGCATTCA+AGG - tig0035382:14456-14475 None:intergenic 30.0%
AATCGCTTAATCAACAATGA+AGG + tig0035382:14480-14499 Msa1454710:intron 30.0%
TATCAACAGATGAATATCGA+GGG - tig0035382:14746-14765 None:intergenic 30.0%
GAACTATAGTTTCTTATTGC+AGG + tig0035382:14875-14894 Msa1454710:intron 30.0%
ACTATAGTTTCTTATTGCAG+GGG + tig0035382:14877-14896 Msa1454710:intron 30.0%
! TGAATTTGCCTTTTTATTGG+GGG - tig0035382:15088-15107 None:intergenic 30.0%
! CTGAATTTGCCTTTTTATTG+GGG - tig0035382:15089-15108 None:intergenic 30.0%
! CCTGAATTTGCCTTTTTATT+GGG - tig0035382:15090-15109 None:intergenic 30.0%
! TCCTGAATTTGCCTTTTTAT+TGG - tig0035382:15091-15110 None:intergenic 30.0%
ACATAACAATAGCCAGTAAA+AGG - tig0035382:15139-15158 None:intergenic 30.0%
! TAGTAAAGAGTGTGTTAATC+AGG - tig0035382:15329-15348 None:intergenic 30.0%
! ATTCACAAGTTCCTCTTTTT+GGG + tig0035382:15353-15372 Msa1454710:intron 30.0%
! TACTTTTATGAAGCTACTGT+TGG + tig0035382:15457-15476 Msa1454710:CDS 30.0%
ATCTTATGCTTTCAAACTGA+AGG + tig0035382:15737-15756 Msa1454710:intron 30.0%
TGTCATTATAGTACATGTTC+CGG - tig0035382:16199-16218 None:intergenic 30.0%
TACTATAATGACAGCTTTCT+TGG + tig0035382:16206-16225 Msa1454710:intron 30.0%
!! CATTTAGCTTTAAATTCCTG+TGG + tig0035382:16253-16272 Msa1454710:intron 30.0%
! AAATCGGTTCTTACTCTTAA+TGG - tig0035382:16362-16381 None:intergenic 30.0%
! ATGTACTTTTGCACTAAACA+TGG + tig0035382:16410-16429 Msa1454710:intron 30.0%
!! ATACCTTGATGATTTTATGC+AGG + tig0035382:16433-16452 Msa1454710:intron 30.0%
TAACCTGCATAAAATCATCA+AGG - tig0035382:16439-16458 None:intergenic 30.0%
GAAATTACCAAAATTTGACG+AGG + tig0035382:16484-16503 Msa1454710:CDS 30.0%
TAAGTAACTAGACAGTATTC+TGG + tig0035382:16549-16568 Msa1454710:intron 30.0%
CAAAAAGACAGTATCTAAGA+CGG - tig0035382:16890-16909 None:intergenic 30.0%
AAGAAAGGGATCAAATTAGA+TGG - tig0035382:16934-16953 None:intergenic 30.0%
TCTTAGTGTAACATTAGTTC+TGG + tig0035382:16953-16972 Msa1454710:three_prime_UTR 30.0%
AAATGGAGAAGAAAGATTGG+TGG - tig0035382:9536-9555 None:intergenic 35.0%
ATTGAAAGGTGAAGTTGTTG+TGG - tig0035382:9578-9597 None:intergenic 35.0%
GGAATGTGAAGAAGATTGAA+AGG - tig0035382:9592-9611 None:intergenic 35.0%
!!! ATGCTTTTAGTTTACCATGG+AGG + tig0035382:9753-9772 Msa1454710:intron 35.0%
! GAAGAGTGTATCTTGATTCT+TGG - tig0035382:9788-9807 None:intergenic 35.0%
AAGATACACTCTTCACTTAC+AGG + tig0035382:9794-9813 Msa1454710:CDS 35.0%
GAGGAAAAAAAGCTACCAAA+AGG + tig0035382:9940-9959 Msa1454710:CDS 35.0%
ACATGGTCAGTTCACAAATT+TGG + tig0035382:9967-9986 Msa1454710:CDS 35.0%
! AAATTTGGTGGAACATGTGT+TGG + tig0035382:9982-10001 Msa1454710:CDS 35.0%
! TGATTCTGAGAGAAAATTGG+TGG + tig0035382:10050-10069 Msa1454710:CDS 35.0%
! TGAAGAGAAGCATAGCTTAA+CGG + tig0035382:10170-10189 Msa1454710:CDS 35.0%
ATGCTTCAAGCTATTGACAT+AGG + tig0035382:10270-10289 Msa1454710:intron 35.0%
TCTTTAGTCTCTGTTTGGTA+AGG + tig0035382:10323-10342 Msa1454710:intron 35.0%
!! AAGTAGAAGCTAGTTGATAG+TGG - tig0035382:10705-10724 None:intergenic 35.0%
!! TGGTAAAAAGTAGTGGATGA+TGG + tig0035382:10821-10840 Msa1454710:intron 35.0%
! CAACTTTGCATGCTTTTCTT+AGG - tig0035382:11065-11084 None:intergenic 35.0%
!! TTTTGGTGTACTTGTGCATA+TGG + tig0035382:11166-11185 Msa1454710:intron 35.0%
! TTTTGTGATCAAAGAGCTAG+AGG + tig0035382:11201-11220 Msa1454710:intron 35.0%
TTCATTTCTCTCATCATGCA+TGG + tig0035382:11305-11324 Msa1454710:intron 35.0%
TGCTGAACAAGAAATACTGT+TGG - tig0035382:11364-11383 None:intergenic 35.0%
!! TCCCTTTTTATTTAGACCTG+AGG + tig0035382:11481-11500 Msa1454710:intron 35.0%
!! ATCCTTTACTGACTTAGTTG+TGG + tig0035382:11778-11797 Msa1454710:intron 35.0%
!! TCCTTTACTGACTTAGTTGT+GGG + tig0035382:11779-11798 Msa1454710:intron 35.0%
!! AGAAGGTATGTTCGAGTTTT+AGG + tig0035382:11846-11865 Msa1454710:intron 35.0%
TTCCTTTCTACTTTGCAGAA+AGG + tig0035382:11998-12017 Msa1454710:intron 35.0%
TCCTTTCTACTTTGCAGAAA+GGG + tig0035382:11999-12018 Msa1454710:intron 35.0%
!! TCAAGTTGATCCTGATTACT+TGG + tig0035382:12081-12100 Msa1454710:CDS 35.0%
TGTTCAGTTTCCAAGTAATC+AGG - tig0035382:12094-12113 None:intergenic 35.0%
GTACTCTCTTAATCCATCTA+AGG + tig0035382:12129-12148 Msa1454710:CDS 35.0%
TATAGTGCAGATCCTAGAAA+AGG + tig0035382:12298-12317 Msa1454710:CDS 35.0%
! AAGCAGAACAAACCTTTTCT+AGG - tig0035382:12313-12332 None:intergenic 35.0%
AAAATCACAGCATCACTAAC+TGG - tig0035382:12539-12558 None:intergenic 35.0%
TTCTTGTGCCCTTAAAATTC+AGG + tig0035382:12629-12648 Msa1454710:intron 35.0%
!!! CATCTTGTGCAGTCTTATTT+TGG + tig0035382:12670-12689 Msa1454710:intron 35.0%
AATAGAAGGATAGCAGATCT+TGG - tig0035382:12791-12810 None:intergenic 35.0%
CTTTACAACGATAGACAACT+TGG + tig0035382:12855-12874 Msa1454710:CDS 35.0%
TTGGCACTTGTAAATGTAGA+AGG + tig0035382:12874-12893 Msa1454710:CDS 35.0%
TGGCACTTGTAAATGTAGAA+GGG + tig0035382:12875-12894 Msa1454710:CDS 35.0%
TACTGCGCTAAAAATAGTAC+TGG - tig0035382:13067-13086 None:intergenic 35.0%
CATGTAACTGTGGATAAACA+AGG - tig0035382:13156-13175 None:intergenic 35.0%
! ACAGCTTTTACTTCTTTCTC+AGG - tig0035382:13256-13275 None:intergenic 35.0%
TGTTATAGCAGAATTGGAGT+TGG - tig0035382:13340-13359 None:intergenic 35.0%
GCATGTTGTTATAGCAGAAT+TGG - tig0035382:13346-13365 None:intergenic 35.0%
AAAGTATGTAACCACTTCTC+AGG + tig0035382:13465-13484 Msa1454710:intron 35.0%
TTCCCTTTCTTTAATGTCCA+GGG - tig0035382:13735-13754 None:intergenic 35.0%
GACATTAAAGAAAGGGAACA+AGG + tig0035382:13737-13756 Msa1454710:intron 35.0%
! AATATCCTTGCTATAGCACA+AGG + tig0035382:13967-13986 Msa1454710:CDS 35.0%
TAAGCGAGAGGATTCTATAA+AGG + tig0035382:14020-14039 Msa1454710:CDS 35.0%
TTATAACTCACAAACCACCA+TGG + tig0035382:14068-14087 Msa1454710:CDS 35.0%
!! ACATTGATTTGCGTGTAATG+GGG + tig0035382:14368-14387 Msa1454710:CDS 35.0%
CTTCCAGAGATGATAGAAAT+TGG + tig0035382:14587-14606 Msa1454710:intron 35.0%
CCAAAAAGTTCGAGTGAAAT+GGG - tig0035382:14619-14638 None:intergenic 35.0%
ACCAAAAAGTTCGAGTGAAA+TGG - tig0035382:14620-14639 None:intergenic 35.0%
TCTCTGATTATTAGATCTCC+AGG + tig0035382:14667-14686 Msa1454710:intron 35.0%
CTATCAACAGATGAATATCG+AGG - tig0035382:14747-14766 None:intergenic 35.0%
CTCGATATTCATCTGTTGAT+AGG + tig0035382:14745-14764 Msa1454710:intron 35.0%
AGAGAAATTCGAGAGGAAAA+AGG + tig0035382:14919-14938 Msa1454710:CDS 35.0%
!! ATCATAATGGCTTGCTATGA+CGG - tig0035382:15034-15053 None:intergenic 35.0%
TGTAATCACCCCCAATAAAA+AGG + tig0035382:15077-15096 Msa1454710:CDS 35.0%
CCCAATAAAAAGGCAAATTC+AGG + tig0035382:15087-15106 Msa1454710:CDS 35.0%
! TAAATGCGATGTCCTTTTAC+TGG + tig0035382:15124-15143 Msa1454710:intron 35.0%
! GATTCACAAGTTCCTCTTTT+TGG + tig0035382:15352-15371 Msa1454710:intron 35.0%
! CCTCAAATACTAGAAGCATA+GGG - tig0035382:15404-15423 None:intergenic 35.0%
! ACCTCAAATACTAGAAGCAT+AGG - tig0035382:15405-15424 None:intergenic 35.0%
TTCCCATTATTGGCACTTTA+CGG + tig0035382:15488-15507 Msa1454710:CDS 35.0%
!!! TCTTCCACTTGTCTTTTTTG+TGG + tig0035382:15584-15603 Msa1454710:intron 35.0%
!!! CACTTGTCTTTTTTGTGGAT+CGG + tig0035382:15589-15608 Msa1454710:intron 35.0%
TTTATTTGTCCCTTCAGAGA+TGG - tig0035382:15666-15685 None:intergenic 35.0%
CAACTACCTCACTAAAAACT+CGG - tig0035382:15822-15841 None:intergenic 35.0%
TTATACTGAACCAGATCCAA+GGG + tig0035382:15861-15880 Msa1454710:CDS 35.0%
ACAACAAACTACGACACATT+TGG - tig0035382:15981-16000 None:intergenic 35.0%
!! TACACAAGTTGATTTCATGG+TGG + tig0035382:16127-16146 Msa1454710:intron 35.0%
! CATGCAATGTGCATATTTTG+AGG - tig0035382:16160-16179 None:intergenic 35.0%
ATGATTTCATGAGAACTAGC+CGG + tig0035382:16177-16196 Msa1454710:intron 35.0%
ACAGCTTTCTTGGTTTATGA+TGG + tig0035382:16216-16235 Msa1454710:intron 35.0%
! TTAAATTCCTGTGGTTCTAC+AGG + tig0035382:16262-16281 Msa1454710:intron 35.0%
TACAGGTGATAATTCTTGCA+AGG + tig0035382:16279-16298 Msa1454710:intron 35.0%
ACAGGTGATAATTCTTGCAA+GGG + tig0035382:16280-16299 Msa1454710:intron 35.0%
ATAATTCTTGCAAGGGAATC+TGG + tig0035382:16287-16306 Msa1454710:CDS 35.0%
TTTCAACCGGAATATCAGAA+AGG - tig0035382:16325-16344 None:intergenic 35.0%
GTTCTTACTCTTAATGGTTC+CGG - tig0035382:16356-16375 None:intergenic 35.0%
! GAAAACTCCTCGTCAAATTT+TGG - tig0035382:16494-16513 None:intergenic 35.0%
! GTTTTCAAAGAGACAAGAAG+AGG + tig0035382:16508-16527 Msa1454710:CDS 35.0%
CTATGAAGAAAATGTCATGG+TGG - tig0035382:16597-16616 None:intergenic 35.0%
!! TTTGAAGGTATTGAGATACG+TGG + tig0035382:16643-16662 Msa1454710:intron 35.0%
!! TTGAAGGTATTGAGATACGT+GGG + tig0035382:16644-16663 Msa1454710:intron 35.0%
GTAGACGTAACGAATCAAAA+GGG + tig0035382:16671-16690 Msa1454710:CDS 35.0%
CATCCATTTGCACAATTATC+TGG + tig0035382:16725-16744 Msa1454710:CDS 35.0%
AGCATTGCAGATTAACTACA+AGG + tig0035382:17019-17038 Msa1454710:three_prime_UTR 35.0%
TGGATCACATTCACATTCAC+GGG - tig0035382:9516-9535 None:intergenic 40.0%
GTGGATCACATTCACATTCA+CGG - tig0035382:9517-9536 None:intergenic 40.0%
GGGAAATGGAGAAGAAAGAT+TGG - tig0035382:9539-9558 None:intergenic 40.0%
AATCTTCTTCACATTCCCTC+AGG + tig0035382:9595-9614 Msa1454710:CDS 40.0%
AGCTACCAAAAGGAGAAACA+TGG + tig0035382:9950-9969 Msa1454710:CDS 40.0%
! ACTGACCATGTTTCTCCTTT+TGG - tig0035382:9958-9977 None:intergenic 40.0%
TGGTCAGTTCACAAATTTGG+TGG + tig0035382:9970-9989 Msa1454710:CDS 40.0%
GATGTATGATCTCATCCACA+AGG + tig0035382:10104-10123 Msa1454710:CDS 40.0%
ACGGCACAAGAATTGTTTGA+TGG + tig0035382:10189-10208 Msa1454710:CDS 40.0%
ACGATCAAAGTAGAGCAACT+TGG - tig0035382:10922-10941 None:intergenic 40.0%
!! TACAGACACTAAGGCACTTT+TGG - tig0035382:10996-11015 None:intergenic 40.0%
ATGCACAAGTACACCAAAAC+AGG - tig0035382:11165-11184 None:intergenic 40.0%
TCCCACAACTAAGTCAGTAA+AGG - tig0035382:11783-11802 None:intergenic 40.0%
TAATCCAAAATTTGGCCGAG+AGG - tig0035382:11901-11920 None:intergenic 40.0%
! TCGGCCAAATTTTGGATTAC+CGG + tig0035382:11902-11921 Msa1454710:intron 40.0%
CAGTCCGGTAATCCAAAATT+TGG - tig0035382:11909-11928 None:intergenic 40.0%
TGATTTCCCTGAGAACCATA+GGG + tig0035382:11927-11946 Msa1454710:intron 40.0%
TCTTAACCCTATGGTTCTCA+GGG - tig0035382:11936-11955 None:intergenic 40.0%
ATCTTAACCCTATGGTTCTC+AGG - tig0035382:11937-11956 None:intergenic 40.0%
TCCCTTTCTGCAAAGTAGAA+AGG - tig0035382:12003-12022 None:intergenic 40.0%
CTTGTATCCATCCATTTGCA+GGG - tig0035382:12028-12047 None:intergenic 40.0%
TCTTGTATCCATCCATTTGC+AGG - tig0035382:12029-12048 None:intergenic 40.0%
CACGAGTAGGATTTACAATG+AGG - tig0035382:12057-12076 None:intergenic 40.0%
GTAGCAATGACTACCTTAGA+TGG - tig0035382:12145-12164 None:intergenic 40.0%
! TCTAAGGTAGTCATTGCTAC+TGG + tig0035382:12145-12164 Msa1454710:CDS 40.0%
!! AGAGTAGTGGGAATGTTTTG+AGG - tig0035382:12187-12206 None:intergenic 40.0%
TGACTTCTCTGCAGCAATTA+TGG + tig0035382:12222-12241 Msa1454710:CDS 40.0%
GACTTCTCTGCAGCAATTAT+GGG + tig0035382:12223-12242 Msa1454710:CDS 40.0%
AATTATGGGCGCGATATTCA+GGG + tig0035382:12237-12256 Msa1454710:CDS 40.0%
ACTATACACACCATCAACGT+CGG - tig0035382:12284-12303 None:intergenic 40.0%
GAAGACACTGTCTTATCAAG+AGG + tig0035382:12559-12578 Msa1454710:CDS 40.0%
! ACTGTCTTATCAAGAGGCAT+GGG + tig0035382:12565-12584 Msa1454710:CDS 40.0%
ATTAGTCCGGTTATTCGCTA+TGG + tig0035382:12718-12737 Msa1454710:CDS 40.0%
! ATTTTCAACACCTCTGCTTC+TGG + tig0035382:12763-12782 Msa1454710:CDS 40.0%
! TTTTGTAGAACTGGAATGGC+TGG + tig0035382:13027-13046 Msa1454710:intron 40.0%
! TGCGCTAAAAATAGTACTGG+CGG - tig0035382:13064-13083 None:intergenic 40.0%
TTTAGCGCAGTAAAAGAGGT+TGG + tig0035382:13075-13094 Msa1454710:CDS 40.0%
AACTGTGGATAAACAAGGGA+GGG - tig0035382:13151-13170 None:intergenic 40.0%
TAACTGTGGATAAACAAGGG+AGG - tig0035382:13152-13171 None:intergenic 40.0%
AGAAGTAAAAGCTGTAGCTG+AGG + tig0035382:13261-13280 Msa1454710:CDS 40.0%
CTGAGCCAATGCATTGAAAA+GGG - tig0035382:13566-13585 None:intergenic 40.0%
TCCCTTTCTTTAATGTCCAG+GGG - tig0035382:13734-13753 None:intergenic 40.0%
GTTCCCTTTCTTTAATGTCC+AGG - tig0035382:13736-13755 None:intergenic 40.0%
AACAACCTTGTGCTATAGCA+AGG - tig0035382:13975-13994 None:intergenic 40.0%
TACTGTTGTTCTTAAGCGAG+AGG + tig0035382:14008-14027 Msa1454710:CDS 40.0%
AGGATTCTATAAAGGCTCTG+CGG + tig0035382:14028-14047 Msa1454710:CDS 40.0%
CACACTACTTGATCAGCTAA+GGG + tig0035382:14125-14144 Msa1454710:CDS 40.0%
!! TGAAAGCACTGAAAGAAGCA+CGG - tig0035382:14192-14211 None:intergenic 40.0%
TGTTTATGTAGGGATCCAAC+AGG + tig0035382:14268-14287 Msa1454710:intron 40.0%
TCTGAATCCCTTGAATGCTA+AGG + tig0035382:14445-14464 Msa1454710:intron 40.0%
TCGCCAATTTCTATCATCTC+TGG - tig0035382:14593-14612 None:intergenic 40.0%
! CCCATTTCACTCGAACTTTT+TGG + tig0035382:14616-14635 Msa1454710:intron 40.0%
TCAGAGATTCACTGTGATCA+GGG - tig0035382:14654-14673 None:intergenic 40.0%
ATCAGAGATTCACTGTGATC+AGG - tig0035382:14655-14674 None:intergenic 40.0%
CTGATTATTAGATCTCCAGG+TGG + tig0035382:14670-14689 Msa1454710:intron 40.0%
TGTGTTTGTTTCATTCCACC+TGG - tig0035382:14688-14707 None:intergenic 40.0%
ACAGATGAATATCGAGGGTA+AGG - tig0035382:14741-14760 None:intergenic 40.0%
TTTATATGCAGTGTGCATCC+TGG + tig0035382:14777-14796 Msa1454710:intron 40.0%
GGCATCAGTTAACAAATTCC+AGG - tig0035382:14798-14817 None:intergenic 40.0%
TAGAGCAGAGGTAATGCAAA+GGG - tig0035382:14819-14838 None:intergenic 40.0%
ATAGAGCAGAGGTAATGCAA+AGG - tig0035382:14820-14839 None:intergenic 40.0%
AAAGTGGAGAGAAATTCGAG+AGG + tig0035382:14912-14931 Msa1454710:CDS 40.0%
CAGTCTACTAAAACCGTGTT+TGG - tig0035382:15000-15019 None:intergenic 40.0%
TAGCAAGCCATTATGATGAC+TGG + tig0035382:15037-15056 Msa1454710:CDS 40.0%
AAATTCAGGACCACTTAGTG+AGG + tig0035382:15101-15120 Msa1454710:CDS 40.0%
ATCGCATTTACCTCACTAAG+TGG - tig0035382:15114-15133 None:intergenic 40.0%
ACAACATTTGCCACTGACAT+GGG - tig0035382:15206-15225 None:intergenic 40.0%
AACAACATTTGCCACTGACA+TGG - tig0035382:15207-15226 None:intergenic 40.0%
ATGTCAGTGGCAAATGTTGT+TGG + tig0035382:15206-15225 Msa1454710:intron 40.0%
GATGAGAAAGTCCCAAAAAG+AGG - tig0035382:15367-15386 None:intergenic 40.0%
CCCTATGCTTCTAGTATTTG+AGG + tig0035382:15401-15420 Msa1454710:intron 40.0%
TCCCATTATTGGCACTTTAC+GGG + tig0035382:15489-15508 Msa1454710:CDS 40.0%
! TTTTGTCACCAGTTTCGAGA+AGG - tig0035382:15516-15535 None:intergenic 40.0%
!! TGCAAATTGAAGGCATCTTC+AGG + tig0035382:15539-15558 Msa1454710:CDS 40.0%
CGATCCACAAAAAAGACAAG+TGG - tig0035382:15591-15610 None:intergenic 40.0%
GTTATACTGAACCAGATCCA+AGG + tig0035382:15860-15879 Msa1454710:CDS 40.0%
TGGAACTGATGTTGCAAGAA+AGG + tig0035382:15894-15913 Msa1454710:CDS 40.0%
TCTTGGTTTATGATGGCTTC+TGG + tig0035382:16223-16242 Msa1454710:intron 40.0%
ATTATCACCTGTAGAACCAC+AGG - tig0035382:16272-16291 None:intergenic 40.0%
GCTAGACCTTTCTGATATTC+CGG + tig0035382:16316-16335 Msa1454710:CDS 40.0%
GGTAGACGTAACGAATCAAA+AGG + tig0035382:16670-16689 Msa1454710:CDS 40.0%
CGTAACGAATCAAAAGGGAA+TGG + tig0035382:16676-16695 Msa1454710:CDS 40.0%
GAGCCAGATAATTGTGCAAA+TGG - tig0035382:16731-16750 None:intergenic 40.0%
GGATCACATTCACATTCACG+GGG - tig0035382:9515-9534 None:intergenic 45.0%
TGGAAAATGTGGACGGGAAA+TGG - tig0035382:9553-9572 None:intergenic 45.0%
TTGTTGTGGCGTGGAAAATG+TGG - tig0035382:9564-9583 None:intergenic 45.0%
TTCAGTGGATGTAGCTGTAG+AGG + tig0035382:9921-9940 Msa1454710:CDS 45.0%
AGCTAGAGGAGTTTCTGTCT+TGG + tig0035382:11215-11234 Msa1454710:intron 45.0%
CACACTTAATACCTTGCAGC+TGG + tig0035382:11743-11762 Msa1454710:intron 45.0%
! ACTGACTTAGTTGTGGGACA+TGG + tig0035382:11785-11804 Msa1454710:intron 45.0%
CTGACTTAGTTGTGGGACAT+GGG + tig0035382:11786-11805 Msa1454710:intron 45.0%
TGACTTAGTTGTGGGACATG+GGG + tig0035382:11787-11806 Msa1454710:intron 45.0%
TCCGGACTTTACTTACCTCT+CGG + tig0035382:11883-11902 Msa1454710:intron 45.0%
! CTTACCTCTCGGCCAAATTT+TGG + tig0035382:11894-11913 Msa1454710:intron 45.0%
CTGATTTCCCTGAGAACCAT+AGG + tig0035382:11926-11945 Msa1454710:intron 45.0%
AGAAAGGGATTCCCTGCAAA+TGG + tig0035382:12014-12033 Msa1454710:intron 45.0%
TCAACTTGATCAGCACGAGT+AGG - tig0035382:12070-12089 None:intergenic 45.0%
CCATCTCTCTTGAGAGTAGT+GGG - tig0035382:12199-12218 None:intergenic 45.0%
TCCATCTCTCTTGAGAGTAG+TGG - tig0035382:12200-12219 None:intergenic 45.0%
CAATTATGGGCGCGATATTC+AGG + tig0035382:12236-12255 Msa1454710:CDS 45.0%
TGTGCTCGTTTAACCATCAG+TGG + tig0035382:12342-12361 Msa1454710:intron 45.0%
CACTGTCTTATCAAGAGGCA+TGG + tig0035382:12564-12583 Msa1454710:CDS 45.0%
! TTATCAAGAGGCATGGGAGA+TGG + tig0035382:12571-12590 Msa1454710:CDS 45.0%
GTAAGTTGCACACTGGATAG+TGG + tig0035382:12593-12612 Msa1454710:intron 45.0%
ACATCCACGCACAATTAGTC+CGG + tig0035382:12705-12724 Msa1454710:CDS 45.0%
ATAACCGGACTAATTGTGCG+TGG - tig0035382:12712-12731 None:intergenic 45.0%
GGTATGCCATAGCGAATAAC+CGG - tig0035382:12727-12746 None:intergenic 45.0%
!! AAAATAGTACTGGCGGTACC+TGG - tig0035382:13057-13076 None:intergenic 45.0%
AAAAGCTGTAGCTGAGGTGT+TGG + tig0035382:13267-13286 Msa1454710:CDS 45.0%
!! TTTGACAGCGCTTTGTTTGC+TGG + tig0035382:13298-13317 Msa1454710:CDS 45.0%
!! TTGACAGCGCTTTGTTTGCT+GGG + tig0035382:13299-13318 Msa1454710:CDS 45.0%
AATGACTGCAACCTGAGAAG+TGG - tig0035382:13479-13498 None:intergenic 45.0%
!!! TGCAGTATTTTGGCAGCTGT+TGG + tig0035382:13505-13524 Msa1454710:CDS 45.0%
!!! CTGGAGTACTTGCCATTTTC+TGG - tig0035382:13531-13550 None:intergenic 45.0%
CAGAAAATGGCAAGTACTCC+AGG + tig0035382:13529-13548 Msa1454710:CDS 45.0%
AGCCAATGCATTGAAAAGGG+TGG - tig0035382:13563-13582 None:intergenic 45.0%
CCTGAGCCAATGCATTGAAA+AGG - tig0035382:13567-13586 None:intergenic 45.0%
!!! CCTTTTCAATGCATTGGCTC+AGG + tig0035382:13564-13583 Msa1454710:CDS 45.0%
TTTCTTTAATGTCCAGGGGC+TGG - tig0035382:13730-13749 None:intergenic 45.0%
AGCCCCTGGACATTAAAGAA+AGG + tig0035382:13729-13748 Msa1454710:intron 45.0%
GCCCCTGGACATTAAAGAAA+GGG + tig0035382:13730-13749 Msa1454710:intron 45.0%
GGATTCTATAAAGGCTCTGC+GGG + tig0035382:14029-14048 Msa1454710:CDS 45.0%
TCACAAACCACCATGGCAAT+GGG + tig0035382:14075-14094 Msa1454710:CDS 45.0%
AATTATGCCCATTGCCATGG+TGG - tig0035382:14085-14104 None:intergenic 45.0%
ACCATGGCAATGGGCATAAT+TGG + tig0035382:14084-14103 Msa1454710:CDS 45.0%
TCCAATTATGCCCATTGCCA+TGG - tig0035382:14088-14107 None:intergenic 45.0%
AGTGTGCTCCCAATTAATCC+AGG - tig0035382:14111-14130 None:intergenic 45.0%
GCACACTACTTGATCAGCTA+AGG + tig0035382:14124-14143 Msa1454710:CDS 45.0%
ACTTGATCAGCTAAGGGATC+AGG + tig0035382:14131-14150 Msa1454710:CDS 45.0%
TAGGGATCCAACAGGCATAA+TGG + tig0035382:14276-14295 Msa1454710:intron 45.0%
! TTTGCGTGTAATGGGGATCA+TGG + tig0035382:14375-14394 Msa1454710:CDS 45.0%
! TTGCGTGTAATGGGGATCAT+GGG + tig0035382:14376-14395 Msa1454710:CDS 45.0%
! GGGGAATCGACTTAGTAAAG+TGG + tig0035382:14896-14915 Msa1454710:intron 45.0%
TCGAGAGGAAAAAGGTGAAG+CGG + tig0035382:14927-14946 Msa1454710:CDS 45.0%
AAAAGGTGAAGCGGCTGATT+TGG + tig0035382:14936-14955 Msa1454710:CDS 45.0%
TGCGCAACCAGTCATCATAA+TGG - tig0035382:15047-15066 None:intergenic 45.0%
! TTATGATGACTGGTTGCGCA+AGG + tig0035382:15047-15066 Msa1454710:CDS 45.0%
! TATGATGACTGGTTGCGCAA+GGG + tig0035382:15048-15067 Msa1454710:CDS 45.0%
TTAAGGAGATCCCATGTCAG+TGG + tig0035382:15193-15212 Msa1454710:intron 45.0%
TGAGGTTGAGAGCTCTTCAA+AGG + tig0035382:15419-15438 Msa1454710:CDS 45.0%
TATGAAGCTACTGTTGGAGC+CGG + tig0035382:15463-15482 Msa1454710:CDS 45.0%
! AGTGCCAATAATGGGAAGAC+CGG - tig0035382:15485-15504 None:intergenic 45.0%
! CCCCGTAAAGTGCCAATAAT+GGG - tig0035382:15493-15512 None:intergenic 45.0%
CCCATTATTGGCACTTTACG+GGG + tig0035382:15490-15509 Msa1454710:CDS 45.0%
! GAAAGGTGTGGATAGACAGT+TGG - tig0035382:15644-15663 None:intergenic 45.0%
CACACCTTTCCATCTCTGAA+GGG + tig0035382:15654-15673 Msa1454710:intron 45.0%
TTGTCCCTTCAGAGATGGAA+AGG - tig0035382:15661-15680 None:intergenic 45.0%
TGAGGTAGTTGCTGAAGCAA+AGG + tig0035382:15831-15850 Msa1454710:CDS 45.0%
TCCGGTTGAAAATCTTGTGC+CGG + tig0035382:16334-16353 Msa1454710:CDS 45.0%
! TCCGGCACAAGATTTTCAAC+CGG - tig0035382:16338-16357 None:intergenic 45.0%
CGAGCTACGAAGATACAAGA+AGG + tig0035382:16700-16719 Msa1454710:CDS 45.0%
TATCAGCCTCTGATAGTTCG+TGG + tig0035382:16788-16807 Msa1454710:CDS 45.0%
TTACGACTTGCCTCGTATCT+TGG + tig0035382:16860-16879 Msa1454710:CDS 45.0%
CTCACTCACTCACTGCCAAA+TGG + tig0035382:9473-9492 Msa1454710:exon 50.0%
TGTGGCGTGGAAAATGTGGA+CGG - tig0035382:9560-9579 None:intergenic 50.0%
AAGGTGAAGTTGTTGTGGCG+TGG - tig0035382:9573-9592 None:intergenic 50.0%
CTTGGTGAGACTTTCCTCCA+TGG - tig0035382:9770-9789 None:intergenic 50.0%
TATCCTGAGCTTCAGCCTTG+TGG - tig0035382:10122-10141 None:intergenic 50.0%
ACAGACATGTGCAGTTGACG+TGG + tig0035382:11388-11407 Msa1454710:intron 50.0%
GCCGAGAGGTAAGTAAAGTC+CGG - tig0035382:11887-11906 None:intergenic 50.0%
GGTTCTCAGGGAAATCAGTC+CGG - tig0035382:11924-11943 None:intergenic 50.0%
AGGGATTCCCTGCAAATGGA+TGG + tig0035382:12018-12037 Msa1454710:intron 50.0%
CCCACTACTCTCAAGAGAGA+TGG + tig0035382:12196-12215 Msa1454710:CDS 50.0%
GGAGATGGTAAGTTGCACAC+TGG + tig0035382:12586-12605 Msa1454710:intron 50.0%
GATCTTGGTTCCAGAAGCAG+AGG - tig0035382:12776-12795 None:intergenic 50.0%
GGGAGGGAAACAACAAAAGC+TGG - tig0035382:13135-13154 None:intergenic 50.0%
! GTTTGCTGGGCGTATTTCTC+AGG + tig0035382:13312-13331 Msa1454710:CDS 50.0%
! CGCCACCCTTTTCAATGCAT+TGG + tig0035382:13558-13577 Msa1454710:CDS 50.0%
CTCACAAACCACCATGGCAA+TGG + tig0035382:14074-14093 Msa1454710:CDS 50.0%
GCAATGGGCATAATTGGACC+TGG + tig0035382:14090-14109 Msa1454710:CDS 50.0%
! GCCCCGTAAAGTGCCAATAA+TGG - tig0035382:15494-15513 None:intergenic 50.0%
CCTTCAGAGATGGAAAGGTG+TGG - tig0035382:15656-15675 None:intergenic 50.0%
CCACACCTTTCCATCTCTGA+AGG + tig0035382:15653-15672 Msa1454710:intron 50.0%
!!! GGATGGCCGAGTTTTTAGTG+AGG + tig0035382:15813-15832 Msa1454710:CDS 50.0%
GTTGCTGAAGCAAAGGAAGC+AGG + tig0035382:15838-15857 Msa1454710:CDS 50.0%
GACAGATCATCCCTTGGATC+TGG - tig0035382:15874-15893 None:intergenic 50.0%
GATCCAAGGGATGATCTGTC+TGG + tig0035382:15874-15893 Msa1454710:CDS 50.0%
GTTCCAGACAGATCATCCCT+TGG - tig0035382:15880-15899 None:intergenic 50.0%
! GGTATTGAGATACGTGGGAG+TGG + tig0035382:16649-16668 Msa1454710:intron 50.0%
GTGGCGTGGAAAATGTGGAC+GGG - tig0035382:9559-9578 None:intergenic 55.0%
CATCCACAAGGCTGAAGCTC+AGG + tig0035382:10116-10135 Msa1454710:CDS 55.0%
CTGTAGCATGACCAGCTGCA+AGG - tig0035382:11757-11776 None:intergenic 55.0%
ACCATCTGGACCGACGTTGA+TGG + tig0035382:12271-12290 Msa1454710:CDS 55.0%
ACCATCAACGTCGGTCCAGA+TGG - tig0035382:12275-12294 None:intergenic 55.0%
ACTGGAATGGCTGGTGTTCC+AGG + tig0035382:13036-13055 Msa1454710:CDS 55.0%
GGCAGCTGTTGGCCAGAAAA+TGG + tig0035382:13516-13535 Msa1454710:CDS 55.0%
AAAAGGGTGGCGCTAACTCC+TGG - tig0035382:13550-13569 None:intergenic 55.0%
CGGGAAGCCATTATGCCTGT+TGG - tig0035382:14286-14305 None:intergenic 55.0%
GGAGCCGGTCTTCCCATTAT+TGG + tig0035382:15478-15497 Msa1454710:CDS 55.0%
TTACGGGGCCTTCTCGAAAC+TGG + tig0035382:15505-15524 Msa1454710:CDS 55.0%
CAAGAAGAGGCTGACACTGC+TGG + tig0035382:16521-16540 Msa1454710:CDS 55.0%
CCTGGTCCACGAACTATCAG+AGG - tig0035382:16797-16816 None:intergenic 55.0%
CCTCTGATAGTTCGTGGACC+AGG + tig0035382:16794-16813 Msa1454710:CDS 55.0%
ATAGTTCGTGGACCAGGAGC+TGG + tig0035382:16800-16819 Msa1454710:CDS 55.0%
! AGACGGAGCACCAAGATACG+AGG - tig0035382:16873-16892 None:intergenic 55.0%
TTGTGGGACATGGGGAGCTG+TGG + tig0035382:11795-11814 Msa1454710:intron 60.0%
GGGCTCGTCAAGTCACCATC+TGG + tig0035382:12257-12276 Msa1454710:CDS 60.0%
! GTGACTTGTGCACCAGCTCC+TGG - tig0035382:16815-16834 None:intergenic 60.0%
GCTGGTGCACAAGTCACAGC+TGG + tig0035382:16818-16837 Msa1454710:CDS 60.0%
GGTGCACAAGTCACAGCTGG+TGG + tig0035382:16821-16840 Msa1454710:CDS 60.0%
!! CGATGGGCTATACCAGCCCC+TGG + tig0035382:13715-13734 Msa1454710:intron 65.0%
Chromosome Type Strat End Strand Name
tig0035382 gene 9428 17142 9428 ID=Msa1454710;Name=Msa1454710
tig0035382 mRNA 9428 17142 9428 ID=Msa1454710-mRNA-1;Parent=Msa1454710;Name=Msa1454710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=64|0.93|0.88|1|1|1|17|247|847
tig0035382 exon 9428 9616 9428 ID=Msa1454710-mRNA-1:exon:19895;Parent=Msa1454710-mRNA-1
tig0035382 exon 9763 9815 9763 ID=Msa1454710-mRNA-1:exon:19896;Parent=Msa1454710-mRNA-1
tig0035382 exon 9917 10232 9917 ID=Msa1454710-mRNA-1:exon:19897;Parent=Msa1454710-mRNA-1
tig0035382 exon 12048 12319 12048 ID=Msa1454710-mRNA-1:exon:19898;Parent=Msa1454710-mRNA-1
tig0035382 exon 12540 12592 12540 ID=Msa1454710-mRNA-1:exon:19899;Parent=Msa1454710-mRNA-1
tig0035382 exon 12682 12896 12682 ID=Msa1454710-mRNA-1:exon:19900;Parent=Msa1454710-mRNA-1
tig0035382 exon 13035 13122 13035 ID=Msa1454710-mRNA-1:exon:19901;Parent=Msa1454710-mRNA-1
tig0035382 exon 13220 13333 13220 ID=Msa1454710-mRNA-1:exon:19902;Parent=Msa1454710-mRNA-1
tig0035382 exon 13487 13585 13487 ID=Msa1454710-mRNA-1:exon:19903;Parent=Msa1454710-mRNA-1
tig0035382 exon 13958 14152 13958 ID=Msa1454710-mRNA-1:exon:19904;Parent=Msa1454710-mRNA-1
tig0035382 exon 14343 14425 14343 ID=Msa1454710-mRNA-1:exon:19905;Parent=Msa1454710-mRNA-1
tig0035382 exon 14897 15122 14897 ID=Msa1454710-mRNA-1:exon:19906;Parent=Msa1454710-mRNA-1
tig0035382 exon 15415 15560 15415 ID=Msa1454710-mRNA-1:exon:19907;Parent=Msa1454710-mRNA-1
tig0035382 exon 15780 15915 15780 ID=Msa1454710-mRNA-1:exon:19908;Parent=Msa1454710-mRNA-1
tig0035382 exon 16284 16367 16284 ID=Msa1454710-mRNA-1:exon:19909;Parent=Msa1454710-mRNA-1
tig0035382 exon 16455 16547 16455 ID=Msa1454710-mRNA-1:exon:19910;Parent=Msa1454710-mRNA-1
tig0035382 exon 16650 17142 16650 ID=Msa1454710-mRNA-1:exon:19911;Parent=Msa1454710-mRNA-1
tig0035382 five_prime_UTR 9428 9491 9428 ID=Msa1454710-mRNA-1:five_prime_utr;Parent=Msa1454710-mRNA-1
tig0035382 CDS 9492 9616 9492 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 9763 9815 9763 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 9917 10232 9917 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 12048 12319 12048 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 12540 12592 12540 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 12682 12896 12682 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 13035 13122 13035 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 13220 13333 13220 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 13487 13585 13487 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 13958 14152 13958 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 14343 14425 14343 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 14897 15122 14897 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 15415 15560 15415 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 15780 15915 15780 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 16284 16367 16284 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 16455 16547 16455 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 CDS 16650 16895 16650 ID=Msa1454710-mRNA-1:cds;Parent=Msa1454710-mRNA-1
tig0035382 three_prime_UTR 16896 17142 16896 ID=Msa1454710-mRNA-1:three_prime_utr;Parent=Msa1454710-mRNA-1
Gene Sequence

>Msa1454710

ATGGTTTTGTTTTGCTTTTGCCCCGTGAATGTGAATGTGATCCACCAATCTTTCTTCTCCATTTCCCGTCCACATTTTCCACGCCACAACAACTTCACCTTTCAATCTTCTTCACATTCCCTCAGTTTACCATGGAGGAAAGTCTCACCAAGAATCAAGATACACTCTTCACTTACAGATTTTTCAGTGGATGTAGCTGTAGAGGAAAAAAAGCTACCAAAAGGAGAAACATGGTCAGTTCACAAATTTGGTGGAACATGTGTTGGAAGTTCAGCAAGAATAAATAATGTTGCAGATGTAATAATCAATGATGATTCTGAGAGAAAATTGGTGGTAGTTTCTGCTATGTCAAAAGTAACAGATATGATGTATGATCTCATCCACAAGGCTGAAGCTCAGGATAAGTCTTATATATCTGCACTTGATGCTGTTGAAGAGAAGCATAGCTTAACGGCACAAGAATTGTTTGATGGAGATGATCTTGCTACTTTCTTAGAAGTCCTCATTGTAAATCCTACTCGTGCTGATCAAGTTGATCCTGATTACTTGGAAACTGAACAAAGACTTAATAAATGGTACTCTCTTAATCCATCTAAGGTAGTCATTGCTACTGGATTTATAGCAAGCACACCTCAAAACATTCCCACTACTCTCAAGAGAGATGGAAGTGACTTCTCTGCAGCAATTATGGGCGCGATATTCAGGGCTCGTCAAGTCACCATCTGGACCGACGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGATGCTGTGATTTTGAAGACACTGTCTTATCAAGAGGCATGGGAGATGTCTTATTTTGGTGCAAATGTCTTACATCCACGCACAATTAGTCCGGTTATTCGCTATGGCATACCAATTATAATAAGGAATATTTTCAACACCTCTGCTTCTGGAACCAAGATCTGCTATCCTTCTATTATTGAAAATGAAGATAAGAAGATATTAAAAGATTATGTCAAAGGCTTTACAACGATAGACAACTTGGCACTTGTAAATGTAGAAGGAACTGGAATGGCTGGTGTTCCAGGTACCGCCAGTACTATTTTTAGCGCAGTAAAAGAGGTTGGAGCCAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGTTTTGCTGTGCCTGAGAAAGAAGTAAAAGCTGTAGCTGAGGTGTTGGAATCTATATTTGACAGCGCTTTGTTTGCTGGGCGTATTTCTCAGGTTGCAGTCATTTCAAATTGCAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGTACTCCAGGAGTTAGCGCCACCCTTTTCAATGCATTGGCTCAGGCCAACATAAATATCCTTGCTATAGCACAAGGTTGTTCTGAGTACAATGTTACTGTTGTTCTTAAGCGAGAGGATTCTATAAAGGCTCTGCGGGCTGTCCATTCCAGATTTTATAACTCACAAACCACCATGGCAATGGGCATAATTGGACCTGGATTAATTGGGAGCACACTACTTGATCAGCTAAGGGATCAGGCAGCAACTTTGAAAGAAGAATCAAACATTGATTTGCGTGTAATGGGGATCATGGGTTCAAAGTCGATGCTCCTTGATGATTTGGGAATCGACTTAGTAAAGTGGAGAGAAATTCGAGAGGAAAAAGGTGAAGCGGCTGATTTGGAAAAATTTGTTCAACATGTACACGGAAATCATGTTATACCAAACACGGTTTTAGTAGACTGCACAGCTGATTCCGTCATAGCAAGCCATTATGATGACTGGTTGCGCAAGGGAATACATGTAATCACCCCCAATAAAAAGGCAAATTCAGGACCACTTAGTGAGTATTTGAGGTTGAGAGCTCTTCAAAGGCAATCATATACACATTACTTTTATGAAGCTACTGTTGGAGCCGGTCTTCCCATTATTGGCACTTTACGGGGCCTTCTCGAAACTGGTGACAAAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAGGATGGCCGAGTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAACCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCAAGAAAGGTGATAATTCTTGCAAGGGAATCTGGCTTAAAGCTAGACCTTTCTGATATTCCGGTTGAAAATCTTGTGCCGGAACCATTAAGAGTTAGCGCATCAACTAAAGAGTTTATGCAGAAATTACCAAAATTTGACGAGGAGTTTTCAAAGAGACAAGAAGAGGCTGACACTGCTGGAGAAGTATTGAGATACGTGGGAGTGGTAGACGTAACGAATCAAAAGGGAATGGTCGAGCTACGAAGATACAAGAAGGATCATCCATTTGCACAATTATCTGGCTCAGATAACATCATAGCATTCACAACAAGAAGATATAGATATCAGCCTCTGATAGTTCGTGGACCAGGAGCTGGTGCACAAGTCACAGCTGGTGGAATATTCAGCGACATTTTACGACTTGCCTCGTATCTTGGTGCTCCGTCTTAG

Protein sequence

>Msa1454710

MVLFCFCPVNVNVIHQSFFSISRPHFPRHNNFTFQSSSHSLSLPWRKVSPRIKIHSSLTDFSVDVAVEEKKLPKGETWSVHKFGGTCVGSSARINNVADVIINDDSERKLVVVSAMSKVTDMMYDLIHKAEAQDKSYISALDAVEEKHSLTAQELFDGDDLATFLEVLIVNPTRADQVDPDYLETEQRLNKWYSLNPSKVVIATGFIASTPQNIPTTLKRDGSDFSAAIMGAIFRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTISPVIRYGIPIIIRNIFNTSASGTKICYPSIIENEDKKILKDYVKGFTTIDNLALVNVEGTGMAGVPGTASTIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLESIFDSALFAGRISQVAVISNCSILAAVGQKMASTPGVSATLFNALAQANINILAIAQGCSEYNVTVVLKREDSIKALRAVHSRFYNSQTTMAMGIIGPGLIGSTLLDQLRDQAATLKEESNIDLRVMGIMGSKSMLLDDLGIDLVKWREIREEKGEAADLEKFVQHVHGNHVIPNTVLVDCTADSVIASHYDDWLRKGIHVITPNKKANSGPLSEYLRLRALQRQSYTHYFYEATVGAGLPIIGTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRVFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLDLSDIPVENLVPEPLRVSASTKEFMQKLPKFDEEFSKRQEEADTAGEVLRYVGVVDVTNQKGMVELRRYKKDHPFAQLSGSDNIIAFTTRRYRYQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS*