AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0467560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467560 MtrunA17_Chr3g0121961 96.930 912 18 5 1 908 1 906 0.0 1805
Msa0467560 MtrunA17_Chr8g0377971 82.265 874 152 1 38 908 43 916 0.0 1500
Msa0467560 MtrunA17_Chr3g0118521 33.690 374 217 8 549 898 3 369 1.95e-52 188
Msa0467560 MtrunA17_Chr7g0252051 28.395 486 298 13 81 546 81 536 8.02e-50 185
Msa0467560 MtrunA17_Chr6g0461951 27.329 483 309 10 81 547 83 539 2.73e-46 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467560 AT4G19710.2 77.883 841 184 1 68 908 78 916 0.0 1367
Msa0467560 AT1G31230.1 75.501 849 206 1 60 908 65 911 0.0 1318
Msa0467560 AT4G19710.1 76.873 761 174 1 68 828 78 836 0.0 1222
Msa0467560 AT5G21060.3 34.584 373 211 10 554 900 8 373 2.67e-53 191
Msa0467560 AT5G21060.2 34.584 373 211 10 554 900 8 373 3.35e-53 190
Msa0467560 AT5G21060.1 34.133 375 208 11 554 900 8 371 3.54e-53 190
Msa0467560 AT5G13280.1 28.780 549 330 16 28 546 27 544 2.00e-47 179
Msa0467560 AT3G02020.1 28.405 514 313 14 70 563 80 558 5.76e-47 177
Msa0467560 AT5G14060.1 27.586 493 303 13 77 546 81 542 6.69e-46 174
Msa0467560 AT5G14060.2 27.586 493 303 13 77 546 81 542 6.69e-46 174
Msa0467560 AT5G14060.3 29.134 381 239 9 77 446 81 441 9.39e-38 148

Find 197 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTTCTTACTCTTAA+TGG 0.142845 3_3:-68951968 None:intergenic
GAAAACTCCTCGTCAAATTT+TGG 0.147615 3_3:-68952100 None:intergenic
CAATTATGGGCGCGATATTC+AGG 0.184677 3_3:+68947904 Msa0467560:CDS
CATCTTGTGCAGTCTTATTT+TGG 0.195740 3_3:+68948338 Msa0467560:intron
GTAATTGGACCTGGATTAAT+TGG 0.204631 3_3:+68949767 Msa0467560:CDS
TGACTTCTCTGCAGCAATTA+TGG 0.206581 3_3:+68947890 Msa0467560:CDS
AAAATATTCCTTATTATAAT+TGG 0.206918 3_3:-68948413 None:intergenic
AAAATACACTCTTCACTTAC+AGG 0.211167 3_3:+68945511 Msa0467560:CDS
GGAGCTGGTCTTCCCATTAT+TGG 0.217397 3_3:+68951073 Msa0467560:CDS
CATTTCAAATTGCAGTATTT+TGG 0.217640 3_3:+68949163 Msa0467560:CDS
ACCATGGCAATGGGCGTAAT+TGG 0.217906 3_3:+68949752 Msa0467560:CDS
CCTTGTGTCCATCCATTTGC+AGG 0.225260 3_3:-68947694 None:intergenic
ACATGGTCAGTTAACAAATT+TGG 0.239474 3_3:+68945668 Msa0467560:CDS
TCAAGATGTTGGAAATTTAA+AGG 0.245840 3_3:+68945946 Msa0467560:CDS
CATCCATTTGCACAATTATC+TGG 0.246596 3_3:+68952334 Msa0467560:CDS
TTTGACAGCGCTTTGTTTGC+TGG 0.257116 3_3:+68948966 Msa0467560:CDS
TTCCCATTATTGGCACTTTA+CGG 0.257376 3_3:+68951083 Msa0467560:CDS
ACTGACCATGTTTCTCCTTT+TGG 0.271253 3_3:-68945656 None:intergenic
GGCAGCTGTTGGCCAGAAAA+TGG 0.279914 3_3:+68949184 Msa0467560:CDS
ACTGGAATGGCTGGTGTTCC+AGG 0.296123 3_3:+68948704 Msa0467560:CDS
TGTAAGTGAAGAGTGTATTT+TGG 0.296404 3_3:-68945509 None:intergenic
TTGCGACTTGCCTCGTATCT+TGG 0.299837 3_3:+68952469 Msa0467560:CDS
AACATTGATTTGCGTGTAAT+GGG 0.300206 3_3:+68950033 Msa0467560:CDS
TCCCATTATTGGCACTTTAC+GGG 0.305246 3_3:+68951084 Msa0467560:CDS
AAAAGGTGAAGCGGCTGATT+TGG 0.310156 3_3:+68950513 Msa0467560:CDS
CTGAACAGAGACTTAATAAA+TGG 0.319803 3_3:+68947775 Msa0467560:CDS
ATAATTCTTGCGAGGGAATC+TGG 0.325746 3_3:+68951896 Msa0467560:CDS
TCTCTTGCTTCTAGTATTTG+AGG 0.330083 3_3:+68950996 Msa0467560:intron
ATGGCATACCAATTATAATA+AGG 0.331452 3_3:+68948405 Msa0467560:CDS
GTAGCAATGATTACCTTAGA+TGG 0.335226 3_3:-68947810 None:intergenic
TCTTAGTGTAACATTAGTTC+TGG 0.347448 3_3:+68952558 Msa0467560:intron
GACTTCTCTGCAGCAATTAT+GGG 0.347805 3_3:+68947891 Msa0467560:CDS
GTACTCTCTTAATCCATCTA+AGG 0.351418 3_3:+68947797 Msa0467560:CDS
GTTCTTACTCTTAATGGTTC+CGG 0.356717 3_3:-68951962 None:intergenic
GCCCCGTAAAGTGCCAATAA+TGG 0.358952 3_3:-68951086 None:intergenic
TAAGCGAGAAGATTCTATAA+AGG 0.360058 3_3:+68949688 Msa0467560:CDS
TTGGCACTTGTAAATGTAGA+AGG 0.362262 3_3:+68948542 Msa0467560:CDS
TGCAAATTGAAGGAATCTTC+AGG 0.364806 3_3:+68951134 Msa0467560:CDS
AAACATTGATTTGCGTGTAA+TGG 0.370904 3_3:+68950032 Msa0467560:CDS
GTTTGCTGGGCGTATTTCTC+AGG 0.372575 3_3:+68948980 Msa0467560:CDS
TGTTCAGTTTCCAAGTAATC+AGG 0.373131 3_3:-68947759 None:intergenic
TTACGGGGCCTTCTCGAAAC+TGG 0.387949 3_3:+68951100 Msa0467560:CDS
TTGTGATAATATATATATCT+TGG 0.392342 3_3:+68952770 Msa0467560:three_prime_UTR
TGGAAAATGTGGAAGGGAAA+TGG 0.393165 3_3:-68945284 None:intergenic
TTACATCTTTAATAACTTCA+AGG 0.405718 3_3:+68951401 Msa0467560:CDS
TTGACAGCGCTTTGTTTGCT+GGG 0.407848 3_3:+68948967 Msa0467560:CDS
GGTATGCCATAGCGAATAAC+AGG 0.407991 3_3:-68948392 None:intergenic
TCAAGTTGATCCTGATTACT+TGG 0.408876 3_3:+68947749 Msa0467560:CDS
GTGACTTGTGCACCAGCTCC+TGG 0.411867 3_3:-68952421 None:intergenic
CCCCGTAAAGTGCCAATAAT+GGG 0.412176 3_3:-68951085 None:intergenic
GGGCTCGTCAAGTCACCATT+TGG 0.412189 3_3:+68947925 Msa0467560:CDS
TCAAATTTGCATCAAGATGT+TGG 0.416184 3_3:+68945935 Msa0467560:CDS
TATCAGAAAGCTCTAGCTTT+AGG 0.416840 3_3:-68951919 None:intergenic
CACATTCACATTCACATTCA+CGG 0.423112 3_3:-68945236 None:intergenic
AGAGAAATTCGAGAGGAAAA+AGG 0.432621 3_3:+68950496 Msa0467560:CDS
CTTGGTGAGTCTTTCCTCCA+TGG 0.434571 3_3:-68945484 None:intergenic
ACGGCACAAGAATTGTTTGA+TGG 0.436063 3_3:+68945890 Msa0467560:CDS
ACATTCACATTCACATTCAC+GGG 0.437701 3_3:-68945235 None:intergenic
CAAGAAGAGGCTGACACTGC+TGG 0.444680 3_3:+68952130 Msa0467560:CDS
AAAAGCAAAACAACACCATT+TGG 0.446657 3_3:-68945210 None:intergenic
TCCTTTACTGACTTAGTTGT+GGG 0.448104 3_3:+68947445 Msa0467560:CDS
AAAAGGGTGGCACTAACTCC+TGG 0.451346 3_3:-68949215 None:intergenic
TGAAGAGAAGCATAGCTTAA+CGG 0.451830 3_3:+68945871 Msa0467560:CDS
CAGAAAATGGCAAGTACTCC+AGG 0.457783 3_3:+68949197 Msa0467560:CDS
CAGTCTACTAAAACCGTGTT+TGG 0.459411 3_3:-68950574 None:intergenic
CATCCACAAGGCTGAAGCTC+AGG 0.460872 3_3:+68945817 Msa0467560:CDS
GGTAGACGTGACTAATCAAA+AGG 0.462124 3_3:+68952279 Msa0467560:CDS
TACTTCTATGAAGCTACTGT+TGG 0.467919 3_3:+68951052 Msa0467560:CDS
GACAGATCATCCCTTGGATC+TGG 0.468935 3_3:-68951480 None:intergenic
GAGCCAGATAATTGTGCAAA+TGG 0.471377 3_3:-68952337 None:intergenic
TCTAAGGTAATCATTGCTAC+TGG 0.476290 3_3:+68947813 Msa0467560:CDS
ATTTGACTTACAAATTATCA+AGG 0.477095 3_3:-68950080 None:intergenic
CCCATTATTGGCACTTTACG+GGG 0.477220 3_3:+68951085 Msa0467560:CDS
ACCATCAACATCGGTCCAAA+TGG 0.477547 3_3:-68947940 None:intergenic
CCTGAGCCAATGCATTGAAA+AGG 0.477917 3_3:-68949232 None:intergenic
TCACAAACCACCATGGCAAT+GGG 0.479632 3_3:+68949743 Msa0467560:CDS
CAATGTTATTATGATATCTC+AGG 0.481310 3_3:+68948769 Msa0467560:CDS
CTCACTCACTCACTGCCAAA+TGG 0.481540 3_3:+68945195 Msa0467560:exon
AATAGAAGGATGGCAGATCT+TGG 0.482872 3_3:-68948456 None:intergenic
GGGAAATGGAGAAGAAAGAT+TGG 0.483371 3_3:-68945270 None:intergenic
AATCTTCTTCACATTCCCTC+AGG 0.486767 3_3:+68945329 Msa0467560:CDS
TTTAGCGCAGTAAAAGAGGT+TGG 0.488466 3_3:+68948743 Msa0467560:CDS
TGCGCAGCCAGTCATCATAA+TGG 0.489412 3_3:-68950621 None:intergenic
GACAAAATATTGCAAATTGA+AGG 0.491595 3_3:+68951124 Msa0467560:CDS
ATTAGTCCTGTTATTCGCTA+TGG 0.491955 3_3:+68948386 Msa0467560:CDS
ACTGACTTAGTTGTGGGACA+TGG 0.492278 3_3:+68947451 Msa0467560:CDS
TTTGCGTGTAATGGGGATCA+TGG 0.494518 3_3:+68950041 Msa0467560:CDS
CTTGTGTCCATCCATTTGCA+GGG 0.495349 3_3:-68947693 None:intergenic
AAAATAGTACTGGCGGTACC+TGG 0.498155 3_3:-68948722 None:intergenic
ATCCTTTACTGACTTAGTTG+TGG 0.498349 3_3:+68947444 Msa0467560:CDS
AGATTCTATAAAGGCTCTGC+GGG 0.501469 3_3:+68949697 Msa0467560:CDS
TATCCTGAGCTTCAGCCTTG+TGG 0.505692 3_3:-68945820 None:intergenic
ACCATTTGGACCGATGTTGA+TGG 0.508173 3_3:+68947939 Msa0467560:CDS
TCCAATTACGCCCATTGCCA+TGG 0.508383 3_3:-68949753 None:intergenic
GTTGCTGAAGCAAAGGAAGC+AGG 0.509400 3_3:+68951447 Msa0467560:CDS
GATCCAAGGGATGATCTGTC+TGG 0.511718 3_3:+68951483 Msa0467560:CDS
ACTTGATCAGCTAAGGGATC+AGG 0.512149 3_3:+68949799 Msa0467560:CDS
AATTATGGGCGCGATATTCA+GGG 0.512887 3_3:+68947905 Msa0467560:CDS
TTCAGTAGATGTAGCTGTAG+AGG 0.513353 3_3:+68945622 Msa0467560:intron
TATCAGCCTCTGATAGTTCG+TGG 0.514794 3_3:+68952397 Msa0467560:CDS
GGTTTGTGAGTCATAAAATC+TGG 0.515634 3_3:-68949729 None:intergenic
CACTGTCTTATCAAGAGGCA+TGG 0.517169 3_3:+68948232 Msa0467560:CDS
CCTCTGATAGTTCGTGGACC+AGG 0.519247 3_3:+68952403 Msa0467560:CDS
ATCATAATGGCTTGCTATGG+CGG 0.519320 3_3:-68950608 None:intergenic
AAAAGCTGTAGCTGAGGTGT+TGG 0.521132 3_3:+68948935 Msa0467560:CDS
GCTAGAGCTTTCTGATATCC+CGG 0.521402 3_3:+68951925 Msa0467560:CDS
CTGACTTAGTTGTGGGACAT+GGG 0.523976 3_3:+68947452 Msa0467560:CDS
CTGAGCCAATGCATTGAAAA+GGG 0.524842 3_3:-68949231 None:intergenic
GCACACTACTTGATCAGCTA+AGG 0.525209 3_3:+68949792 Msa0467560:CDS
TGGAACTGATGTTGCAAGAA+AGG 0.525559 3_3:+68951503 Msa0467560:CDS
AGAAAGGGACTCCCTGCAAA+TGG 0.528240 3_3:+68947682 Msa0467560:intron
GAAGACACTGTCTTATCAAG+AGG 0.529922 3_3:+68948227 Msa0467560:CDS
CTCACAAACCACCATGGCAA+TGG 0.529985 3_3:+68949742 Msa0467560:CDS
CCCGGTTGAAAATCTTGTGC+CGG 0.532233 3_3:+68951943 Msa0467560:CDS
TAATTGGACCTGGATTAATT+GGG 0.533451 3_3:+68949768 Msa0467560:CDS
TGGTCAGTTAACAAATTTGG+TGG 0.533594 3_3:+68945671 Msa0467560:CDS
CCATCTCTCTTGAGAGTAGT+GGG 0.533662 3_3:-68947864 None:intergenic
CTTTACAACGATAGACAACT+TGG 0.533740 3_3:+68948523 Msa0467560:CDS
ATAGTTCGTGGACCAGGAGC+TGG 0.533819 3_3:+68952409 Msa0467560:CDS
TTGTTGTGGCGTGGAAAATG+TGG 0.534573 3_3:-68945295 None:intergenic
TAGCAAGCCATTATGATGAC+TGG 0.539883 3_3:+68950614 Msa0467560:CDS
TATAGCAAGGATATTTATGT+TGG 0.541082 3_3:-68949627 None:intergenic
TATAGTGCAGATCCTAGAAA+AGG 0.542051 3_3:+68947966 Msa0467560:CDS
ATATTAAAAGATTATGTCAA+AGG 0.543405 3_3:+68948500 Msa0467560:CDS
TGAGGTTAAGAGCTCTTCAA+AGG 0.543432 3_3:+68951014 Msa0467560:CDS
TCCCACAACTAAGTCAGTAA+AGG 0.544287 3_3:-68947446 None:intergenic
ATCTTTAATAACTTCAAGGA+TGG 0.546627 3_3:+68951405 Msa0467560:CDS
TTGTGGGACATGGGGAGCTG+TGG 0.547165 3_3:+68947461 Msa0467560:CDS
TCCATCTCTCTTGAGAGTAG+TGG 0.550339 3_3:-68947865 None:intergenic
GTGAGTCATAAAATCTGGAA+TGG 0.551255 3_3:-68949724 None:intergenic
TATGAAGCTACTGTTGGAGC+TGG 0.552013 3_3:+68951058 Msa0467560:CDS
TGAGGTAGTTGCTGAAGCAA+AGG 0.555717 3_3:+68951440 Msa0467560:CDS
TTATGATGACTGGCTGCGCA+AGG 0.556068 3_3:+68950624 Msa0467560:CDS
AGGGACTCCCTGCAAATGGA+TGG 0.556923 3_3:+68947686 Msa0467560:CDS
AGTGTGCTCCCAATTAATCC+AGG 0.560803 3_3:-68949776 None:intergenic
GCTGGTGCACAAGTCACAGC+TGG 0.561903 3_3:+68952427 Msa0467560:CDS
CCCACTACTCTCAAGAGAGA+TGG 0.565006 3_3:+68947864 Msa0467560:CDS
GTCATCATAATGGCTTGCTA+TGG 0.567164 3_3:-68950611 None:intergenic
TTATCAAGAGGCATGGGAGA+TGG 0.567207 3_3:+68948239 Msa0467560:CDS
GGTATTGAGATACGTGGGAG+TGG 0.569260 3_3:+68952258 Msa0467560:intron
ATGCTTCAAGCTATTGACAT+AGG 0.569687 3_3:+68945971 Msa0467560:CDS
AGCATTGCAGATTAGCTACA+AGG 0.570430 3_3:+68952623 Msa0467560:three_prime_UTR
CCTGCAAATGGATGGACACA+AGG 0.574446 3_3:+68947694 Msa0467560:CDS
ACAGGTGATAATTCTTGCGA+GGG 0.575424 3_3:+68951889 Msa0467560:intron
AGAAGTAAAAGCTGTAGCTG+AGG 0.575535 3_3:+68948929 Msa0467560:CDS
CTGAGATATCATAATAACAT+TGG 0.576835 3_3:-68948768 None:intergenic
AAATGGAGAAGAAAGATTGG+TGG 0.577922 3_3:-68945267 None:intergenic
AACAACCTTGTGCTATAGCA+AGG 0.580471 3_3:-68949640 None:intergenic
TTGCGTGTAATGGGGATCAT+GGG 0.583341 3_3:+68950042 Msa0467560:CDS
GGTGCACAAGTCACAGCTGG+TGG 0.583364 3_3:+68952430 Msa0467560:CDS
TACAGGTGATAATTCTTGCG+AGG 0.589324 3_3:+68951888 Msa0467560:intron
CAAATTTGGTGGAACATGTG+TGG 0.590269 3_3:+68945682 Msa0467560:CDS
CGTGACTAATCAAAAGGGAA+TGG 0.593201 3_3:+68952285 Msa0467560:CDS
GTTCCAGACAGATCATCCCT+TGG 0.593893 3_3:-68951486 None:intergenic
GCAATGGGCGTAATTGGACC+TGG 0.598641 3_3:+68949758 Msa0467560:CDS
AATTACGCCCATTGCCATGG+TGG 0.598897 3_3:-68949750 None:intergenic
TGACTTAGTTGTGGGACATG+GGG 0.601011 3_3:+68947453 Msa0467560:CDS
ACTGTCTTATCAAGAGGCAT+GGG 0.602739 3_3:+68948233 Msa0467560:CDS
GGGGAATCGACTTAGTAAAG+TGG 0.602813 3_3:+68950473 Msa0467560:intron
CACACTACTTGATCAGCTAA+GGG 0.604044 3_3:+68949793 Msa0467560:CDS
GTTATACTGAACCAGATCCA+AGG 0.604842 3_3:+68951469 Msa0467560:CDS
TATGATGACTGGCTGCGCAA+GGG 0.608656 3_3:+68950625 Msa0467560:CDS
GGAATGTGAAGAAGATTGAA+AGG 0.609635 3_3:-68945323 None:intergenic
ATTGAAAGGTGAAGTTGTTG+TGG 0.609959 3_3:-68945309 None:intergenic
AAATCATGTTATACCAAACA+CGG 0.611522 3_3:+68950561 Msa0467560:CDS
TTCTGAGAGAAAATTAGTAG+TGG 0.611561 3_3:+68945754 Msa0467560:CDS
GTAGACGTGACTAATCAAAA+GGG 0.615782 3_3:+68952280 Msa0467560:CDS
TGGCACTTGTAAATGTAGAA+GGG 0.620113 3_3:+68948543 Msa0467560:CDS
TTGAAGGTATTGAGATACGT+GGG 0.620162 3_3:+68952253 Msa0467560:intron
ATCGTGTTTACCTCACTAAG+TGG 0.622148 3_3:-68950688 None:intergenic
AAATTTGGTGGAACATGTGT+GGG 0.622850 3_3:+68945683 Msa0467560:CDS
TTATACTGAACCAGATCCAA+GGG 0.626685 3_3:+68951470 Msa0467560:CDS
TCAACTTGATCATCACGAGT+AGG 0.630309 3_3:-68947735 None:intergenic
ACATTGATTTGCGTGTAATG+GGG 0.630578 3_3:+68950034 Msa0467560:CDS
AAAGTGGAGAGAAATTCGAG+AGG 0.631796 3_3:+68950489 Msa0467560:CDS
CGAGCTACGAAGATACAAGA+AGG 0.634713 3_3:+68952309 Msa0467560:CDS
AAGGTGAAGTTGTTGTGGCG+TGG 0.636050 3_3:-68945304 None:intergenic
GATCTTGGTTCCAGAAGCAG+AGG 0.638422 3_3:-68948441 None:intergenic
CCTGGTCCACGAACTATCAG+AGG 0.638898 3_3:-68952403 None:intergenic
CACGAGTAGGATTTACAATG+AGG 0.639826 3_3:-68947722 None:intergenic
AAATTCAGGACCACTTAGTG+AGG 0.640316 3_3:+68950678 Msa0467560:CDS
AAATTTGTTCAAAATGTACA+CGG 0.641865 3_3:+68950538 Msa0467560:CDS
AATATCCTTGCTATAGCACA+AGG 0.642453 3_3:+68949635 Msa0467560:CDS
TTTGAAGGTATTGAGATACG+TGG 0.650454 3_3:+68952252 Msa0467560:intron
CATTCACATTCACATTCACG+GGG 0.650697 3_3:-68945234 None:intergenic
AGCCAATGCATTGAAAAGGG+TGG 0.652774 3_3:-68949228 None:intergenic
TGTGGCGTGGAAAATGTGGA+AGG 0.659056 3_3:-68945291 None:intergenic
CTGCAAATGGATGGACACAA+GGG 0.659166 3_3:+68947695 Msa0467560:CDS
AGCTACCAAAAGGAGAAACA+TGG 0.661800 3_3:+68945651 Msa0467560:CDS
ATAACAGGACTAATTGTGCG+TGG 0.667475 3_3:-68948377 None:intergenic
ACTATACACACCATCAACAT+CGG 0.667842 3_3:-68947949 None:intergenic
GTGGCGTGGAAAATGTGGAA+GGG 0.670336 3_3:-68945290 None:intergenic
AGATGGAGCACCAAGATACG+AGG 0.670465 3_3:-68952479 None:intergenic
AAGATTCTATAAAGGCTCTG+CGG 0.671564 3_3:+68949696 Msa0467560:CDS
TTATGACTCACAAACCACCA+TGG 0.683309 3_3:+68949736 Msa0467560:CDS
GATGTATGATCTCATCCACA+AGG 0.691167 3_3:+68945805 Msa0467560:CDS
GAAATTACCAAAATTTGACG+AGG 0.695620 3_3:+68952093 Msa0467560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAATTTAAAAAATTT+CGG + chr3_3:68946503-68946522 Msa0467560:intron 0.0%
!! TAAATAAATAGATAGTTATT+TGG - chr3_3:68946460-68946479 None:intergenic 10.0%
!! AAAATATTCCTTATTATAAT+TGG - chr3_3:68948416-68948435 None:intergenic 10.0%
!!! TTTTTAGTACTATATATTTT+TGG + chr3_3:68952669-68952688 Msa0467560:three_prime_UTR 10.0%
!!! TTTTAGTACTATATATTTTT+GGG + chr3_3:68952670-68952689 Msa0467560:three_prime_UTR 10.0%
!!! AATTTTATATCAAAAAAAGA+TGG - chr3_3:68952722-68952741 None:intergenic 10.0%
!! TTTGTAGTATTTAGTAAAAT+TGG - chr3_3:68946320-68946339 None:intergenic 15.0%
!! AAAAAGAAAAGACAATAATT+AGG - chr3_3:68947216-68947235 None:intergenic 15.0%
!! ATATTAAAAGATTATGTCAA+AGG + chr3_3:68948500-68948519 Msa0467560:CDS 15.0%
!! TATTCTAAACTTAACAAAAA+CGG - chr3_3:68949274-68949293 None:intergenic 15.0%
!!! ATTTTGTTATCAATTCAATT+TGG + chr3_3:68950232-68950251 Msa0467560:intron 15.0%
!!! ATTCACAAATTATTCATTTT+GGG + chr3_3:68950947-68950966 Msa0467560:intron 15.0%
!! AATTATAAGTTATAAGCTAC+AGG - chr3_3:68946191-68946210 None:intergenic 20.0%
!! AATAGATAGTTATTTGGTTA+AGG - chr3_3:68946454-68946473 None:intergenic 20.0%
!!! TAAAAAATTTCGGCTTTTTT+TGG + chr3_3:68946513-68946532 Msa0467560:intron 20.0%
!!! GAAGTGTTTAGTAAAATTAA+CGG + chr3_3:68946592-68946611 Msa0467560:intron 20.0%
!! TTTATATCATATAGACACTA+AGG - chr3_3:68946717-68946736 None:intergenic 20.0%
!!! AACGACAAATATTTTTGATA+TGG + chr3_3:68947128-68947147 Msa0467560:intron 20.0%
!!! TATTAAGTGTGTTATTAGTT+GGG - chr3_3:68947400-68947419 None:intergenic 20.0%
!!! TATTTTTTATCTTAACCCTA+TGG - chr3_3:68947612-68947631 None:intergenic 20.0%
!!! TCTTCATTTTCAATAATAGA+AGG - chr3_3:68948473-68948492 None:intergenic 20.0%
!!! AAGGAAATGTTTTAATATGT+TGG + chr3_3:68949543-68949562 Msa0467560:intron 20.0%
!!! TGCTTTCAAGTATTATAAAT+TGG + chr3_3:68949870-68949889 Msa0467560:intron 20.0%
!! ACAAATGTTATGTTTATGTA+GGG + chr3_3:68949924-68949943 Msa0467560:intron 20.0%
!!! ATTTGACTTACAAATTATCA+AGG - chr3_3:68950083-68950102 None:intergenic 20.0%
!! CTCTATTAGTCATATTAATT+TGG + chr3_3:68950411-68950430 Msa0467560:intron 20.0%
!!! AAATTTGTTCAAAATGTACA+CGG + chr3_3:68950538-68950557 Msa0467560:CDS 20.0%
!!! GATTCACAAATTATTCATTT+TGG + chr3_3:68950946-68950965 Msa0467560:intron 20.0%
!!! AAATTAAAAGTACCAATTCA+AGG + chr3_3:68951292-68951311 Msa0467560:intron 20.0%
!! TTACATCTTTAATAACTTCA+AGG + chr3_3:68951401-68951420 Msa0467560:CDS 20.0%
!! TATATAGTACTAAAAACAGT+AGG - chr3_3:68952665-68952684 None:intergenic 20.0%
! ATATATGTGGTATATAGTCA+AGG - chr3_3:68945387-68945406 None:intergenic 25.0%
! AAACAAGAAAATGTTATGCA+GGG - chr3_3:68945448-68945467 None:intergenic 25.0%
! AAAACAAGAAAATGTTATGC+AGG - chr3_3:68945449-68945468 None:intergenic 25.0%
! TCAAGATGTTGGAAATTTAA+AGG + chr3_3:68945946-68945965 Msa0467560:CDS 25.0%
!!! CTTTTTTTGGTAAAAAGTAG+TGG + chr3_3:68946526-68946545 Msa0467560:intron 25.0%
!! AAATATGCATGCTTTTCTTA+GGG - chr3_3:68946839-68946858 None:intergenic 25.0%
!! TAAATATGCATGCTTTTCTT+AGG - chr3_3:68946840-68946859 None:intergenic 25.0%
!!! GATGAATTTTTTGTGATCAA+AGG + chr3_3:68946892-68946911 Msa0467560:intron 25.0%
! TGTTTAGATTTCATGATTGA+TGG + chr3_3:68946957-68946976 Msa0467560:intron 25.0%
! ACCTTAGGTCTAAATAAAAA+GGG - chr3_3:68947166-68947185 None:intergenic 25.0%
! TTGCCTTACTTAAAATTCTT+TGG + chr3_3:68947248-68947267 Msa0467560:intron 25.0%
! CCAAAATATTAAGCTTAACA+TGG - chr3_3:68947314-68947333 None:intergenic 25.0%
!! CCATGTTAAGCTTAATATTT+TGG + chr3_3:68947311-68947330 Msa0467560:intron 25.0%
!! TGTTGCTTAAAAGAAATTTC+TGG + chr3_3:68947365-68947384 Msa0467560:intron 25.0%
!! GTATTAAGTGTGTTATTAGT+TGG - chr3_3:68947401-68947420 None:intergenic 25.0%
!!! ATTGTCTTTTGTTGTTAAGA+AGG + chr3_3:68947495-68947514 Msa0467560:CDS 25.0%
! TAAATGAAGAATAAATGCCA+TGG - chr3_3:68948091-68948110 None:intergenic 25.0%
!! GTTAATCTCCTGAATTTTAA+GGG - chr3_3:68948308-68948327 None:intergenic 25.0%
!! AGTTAATCTCCTGAATTTTA+AGG - chr3_3:68948309-68948328 None:intergenic 25.0%
! ATGGCATACCAATTATAATA+AGG + chr3_3:68948405-68948424 Msa0467560:CDS 25.0%
!! CATTTTCAATAATAGAAGGA+TGG - chr3_3:68948469-68948488 None:intergenic 25.0%
! CATTATAGTCTACAACATTT+GGG - chr3_3:68948658-68948677 None:intergenic 25.0%
! ACATTATAGTCTACAACATT+TGG - chr3_3:68948659-68948678 None:intergenic 25.0%
!!! ATTGTTTTGTTTTGTAGAAC+TGG + chr3_3:68948686-68948705 Msa0467560:intron 25.0%
! CTGAGATATCATAATAACAT+TGG - chr3_3:68948771-68948790 None:intergenic 25.0%
! CAATGTTATTATGATATCTC+AGG + chr3_3:68948769-68948788 Msa0467560:CDS 25.0%
! TGAACAAAAGAAGAAGAATT+TGG - chr3_3:68949057-68949076 None:intergenic 25.0%
!! CATTTCAAATTGCAGTATTT+TGG + chr3_3:68949163-68949182 Msa0467560:CDS 25.0%
! CTAAAGTAATAGAATTTCGA+TGG + chr3_3:68949366-68949385 Msa0467560:intron 25.0%
! AAATCAGGTGAAATACATTA+AGG + chr3_3:68949471-68949490 Msa0467560:intron 25.0%
! AAATACATTAAGGAAGAAGA+GGG + chr3_3:68949481-68949500 Msa0467560:intron 25.0%
! AAGATATCAAAGAAAGATGA+AGG + chr3_3:68949524-68949543 Msa0467560:intron 25.0%
!!! TCATTTGTCTAACTTGTTTA+TGG + chr3_3:68949582-68949601 Msa0467560:intron 25.0%
! TATAGCAAGGATATTTATGT+TGG - chr3_3:68949630-68949649 None:intergenic 25.0%
! CTACATAAACATAACATTTG+TGG - chr3_3:68949925-68949944 None:intergenic 25.0%
! CACAAATGTTATGTTTATGT+AGG + chr3_3:68949923-68949942 Msa0467560:intron 25.0%
! CCAAAAAGTTAAAGTGAAAA+GGG - chr3_3:68950264-68950283 None:intergenic 25.0%
! ACCAAAAAGTTAAAGTGAAA+AGG - chr3_3:68950265-68950284 None:intergenic 25.0%
!!! TTTCACTTTAACTTTTTGGT+AGG + chr3_3:68950265-68950284 Msa0467560:intron 25.0%
!! AAAGAACTTTTCATATCAAC+AGG - chr3_3:68950336-68950355 None:intergenic 25.0%
! AACTATAGTTTCTTATTGCA+GGG + chr3_3:68950453-68950472 Msa0467560:intron 25.0%
! AAATCATGTTATACCAAACA+CGG + chr3_3:68950561-68950580 Msa0467560:CDS 25.0%
! GACAAAATATTGCAAATTGA+AGG + chr3_3:68951124-68951143 Msa0467560:CDS 25.0%
! GATAATGATAATCCTTGAAT+TGG - chr3_3:68951307-68951326 None:intergenic 25.0%
! ATCTTTAATAACTTCAAGGA+TGG + chr3_3:68951405-68951424 Msa0467560:CDS 25.0%
! AAAACTGTGAGAATAAAATG+TGG - chr3_3:68951555-68951574 None:intergenic 25.0%
! CAAGCTTATACATAAATTTG+AGG - chr3_3:68951632-68951651 None:intergenic 25.0%
!! ATTTGATTTCAAGCTTAGAA+TGG + chr3_3:68951672-68951691 Msa0467560:intron 25.0%
!! GTGTATTTCAAATGTTTCTA+AGG - chr3_3:68951721-68951740 None:intergenic 25.0%
!!! AAATACACAAGTTGATTTCA+TGG + chr3_3:68951733-68951752 Msa0467560:intron 25.0%
! TACTATAATGACAGATTTCT+TGG + chr3_3:68951815-68951834 Msa0467560:intron 25.0%
! AACTGCATAATTCATGAAAT+CGG - chr3_3:68951987-68952006 None:intergenic 25.0%
!!! ATACATTGTTGATTTTATGC+AGG + chr3_3:68952042-68952061 Msa0467560:intron 25.0%
!! TGGAAAAACTAATAGTTTGT+AGG - chr3_3:68952186-68952205 None:intergenic 25.0%
! ATACTATGAAGAAAATGTCA+TGG - chr3_3:68952209-68952228 None:intergenic 25.0%
! AGAACATTTGTAATGTTTGA+AGG + chr3_3:68952237-68952256 Msa0467560:intron 25.0%
! AATGTTACACTAAGAAGAAA+GGG - chr3_3:68952553-68952572 None:intergenic 25.0%
! TAATGTTACACTAAGAAGAA+AGG - chr3_3:68952554-68952573 None:intergenic 25.0%
! TATATCAAAAAAAGATGGAC+TGG - chr3_3:68952717-68952736 None:intergenic 25.0%
AAAAGCAAAACAACACCATT+TGG - chr3_3:68945213-68945232 None:intergenic 30.0%
GTAAAAGAAAAGATACCTGA+GGG - chr3_3:68945347-68945366 None:intergenic 30.0%
AGTAAAAGAAAAGATACCTG+AGG - chr3_3:68945348-68945367 None:intergenic 30.0%
AACAAGAAAATGTTATGCAG+GGG - chr3_3:68945447-68945466 None:intergenic 30.0%
!!! TTCTTGCTTTTAGTTTACCA+TGG + chr3_3:68945467-68945486 Msa0467560:intron 30.0%
!! TGTAAGTGAAGAGTGTATTT+TGG - chr3_3:68945512-68945531 None:intergenic 30.0%
AAAATACACTCTTCACTTAC+AGG + chr3_3:68945511-68945530 Msa0467560:CDS 30.0%
ACATGGTCAGTTAACAAATT+TGG + chr3_3:68945668-68945687 Msa0467560:CDS 30.0%
! TTCTGAGAGAAAATTAGTAG+TGG + chr3_3:68945754-68945773 Msa0467560:CDS 30.0%
TCAAATTTGCATCAAGATGT+TGG + chr3_3:68945935-68945954 Msa0467560:CDS 30.0%
ACAACTAAAATAGACCTGTT+TGG + chr3_3:68946079-68946098 Msa0467560:intron 30.0%
CAACTAAAATAGACCTGTTT+GGG + chr3_3:68946080-68946099 Msa0467560:intron 30.0%
AACTAAAATAGACCTGTTTG+GGG + chr3_3:68946081-68946100 Msa0467560:intron 30.0%
AATAAATCAATACCCCAAAC+AGG - chr3_3:68946096-68946115 None:intergenic 30.0%
! CACAAATAAGCTAGTTGATA+GGG - chr3_3:68946362-68946381 None:intergenic 30.0%
ACACAAATAAGCTAGTTGAT+AGG - chr3_3:68946363-68946382 None:intergenic 30.0%
!! TATTTGGTTAAGGCTTTGTT+TGG - chr3_3:68946444-68946463 None:intergenic 30.0%
ATTTGCAAAGAGCAAAAAGT+AGG - chr3_3:68946794-68946813 None:intergenic 30.0%
! AATATGCATGCTTTTCTTAG+GGG - chr3_3:68946838-68946857 None:intergenic 30.0%
!! TCCCTTTTTATTTAGACCTA+AGG + chr3_3:68947162-68947181 Msa0467560:intron 30.0%
GACCTTAGGTCTAAATAAAA+AGG - chr3_3:68947167-68947186 None:intergenic 30.0%
GACAATAATTAGGAGTTAAC+AGG - chr3_3:68947206-68947225 None:intergenic 30.0%
!! CAGCCAAAGAATTTTAAGTA+AGG - chr3_3:68947254-68947273 None:intergenic 30.0%
TACTTAAAATTCTTTGGCTG+AGG + chr3_3:68947254-68947273 Msa0467560:intron 30.0%
!! AGAAGGTATGTTCAAGTTTT+AGG + chr3_3:68947512-68947531 Msa0467560:intron 30.0%
CTGAACAGAGACTTAATAAA+TGG + chr3_3:68947775-68947794 Msa0467560:CDS 30.0%
CATCATATAATATCCACTGA+TGG - chr3_3:68948026-68948045 None:intergenic 30.0%
CATCAGTGGATATTATATGA+TGG + chr3_3:68948024-68948043 Msa0467560:intron 30.0%
ACTTATATCGATACATACCA+TGG + chr3_3:68948071-68948090 Msa0467560:intron 30.0%
!!! TTTGTTTTGTAGAACTGGAA+TGG + chr3_3:68948691-68948710 Msa0467560:intron 30.0%
!!! TATTTTTAGCGCAGTAAAAG+AGG + chr3_3:68948739-68948758 Msa0467560:CDS 30.0%
ATGTAACTGTGGATAAACAA+GGG - chr3_3:68948823-68948842 None:intergenic 30.0%
ATGTTTAACTGTGTTTGTGT+AGG + chr3_3:68948866-68948885 Msa0467560:intron 30.0%
!!! AGTTGTTTTTTGACAAGAAG+TGG - chr3_3:68949101-68949120 None:intergenic 30.0%
AGAGAAACAAGACTTAAATC+AGG + chr3_3:68949456-68949475 Msa0467560:intron 30.0%
GAAATACATTAAGGAAGAAG+AGG + chr3_3:68949480-68949499 Msa0467560:intron 30.0%
AATACATTAAGGAAGAAGAG+GGG + chr3_3:68949482-68949501 Msa0467560:intron 30.0%
GTCAAACTTGTAAATGAAAC+AGG + chr3_3:68949604-68949623 Msa0467560:intron 30.0%
TAAGCGAGAAGATTCTATAA+AGG + chr3_3:68949688-68949707 Msa0467560:CDS 30.0%
TAATTGGACCTGGATTAATT+GGG + chr3_3:68949768-68949787 Msa0467560:CDS 30.0%
! CATGAATTAATCCATCGATT+GGG - chr3_3:68949971-68949990 None:intergenic 30.0%
ACATGAATTAATCCATCGAT+TGG - chr3_3:68949972-68949991 None:intergenic 30.0%
!!! CATGTAACATTTTTTCATGC+AGG + chr3_3:68949987-68950006 Msa0467560:intron 30.0%
!! AAACATTGATTTGCGTGTAA+TGG + chr3_3:68950032-68950051 Msa0467560:CDS 30.0%
!! AACATTGATTTGCGTGTAAT+GGG + chr3_3:68950033-68950052 Msa0467560:CDS 30.0%
GTTAATTCCTTAGCATTCAA+GGG - chr3_3:68950121-68950140 None:intergenic 30.0%
TGTTAATTCCTTAGCATTCA+AGG - chr3_3:68950122-68950141 None:intergenic 30.0%
AATCGCTTAATCAACAATGA+AGG + chr3_3:68950146-68950165 Msa0467560:intron 30.0%
!! CCCTTTTCACTTTAACTTTT+TGG + chr3_3:68950261-68950280 Msa0467560:intron 30.0%
GAACTATAGTTTCTTATTGC+AGG + chr3_3:68950452-68950471 Msa0467560:intron 30.0%
ACTATAGTTTCTTATTGCAG+GGG + chr3_3:68950454-68950473 Msa0467560:intron 30.0%
! TGAATTTGCCTTTTTATTGG+GGG - chr3_3:68950665-68950684 None:intergenic 30.0%
! CTGAATTTGCCTTTTTATTG+GGG - chr3_3:68950666-68950685 None:intergenic 30.0%
! CCTGAATTTGCCTTTTTATT+GGG - chr3_3:68950667-68950686 None:intergenic 30.0%
! TCCTGAATTTGCCTTTTTAT+TGG - chr3_3:68950668-68950687 None:intergenic 30.0%
! TAGTAATGAGTGTGTTATTC+AGG - chr3_3:68950923-68950942 None:intergenic 30.0%
TTTATTTGTCCCTTGAACAA+GGG - chr3_3:68951275-68951294 None:intergenic 30.0%
ATTTATTTGTCCCTTGAACA+AGG - chr3_3:68951276-68951295 None:intergenic 30.0%
ATCTTATGCTTTCAAACTGA+AGG + chr3_3:68951346-68951365 Msa0467560:intron 30.0%
! TATTACTTCTGATTTTGCAG+TGG + chr3_3:68951369-68951388 Msa0467560:intron 30.0%
! ATTACTTCTGATTTTGCAGT+GGG + chr3_3:68951370-68951389 Msa0467560:intron 30.0%
! CATGCAATATGCATATTTTG+AGG - chr3_3:68951769-68951788 None:intergenic 30.0%
!! CACTTAGCTTTAAATTTCTG+TGG + chr3_3:68951862-68951881 Msa0467560:intron 30.0%
! TTAAATTTCTGTGGTTCTAC+AGG + chr3_3:68951871-68951890 Msa0467560:intron 30.0%
! AAATCGGTTCTTACTCTTAA+TGG - chr3_3:68951971-68951990 None:intergenic 30.0%
! ATGTACTTTTGCACTAAACA+TGG + chr3_3:68952019-68952038 Msa0467560:intron 30.0%
GAAATTACCAAAATTTGACG+AGG + chr3_3:68952093-68952112 Msa0467560:CDS 30.0%
CAAAAAGACAGTATCTAAGA+TGG - chr3_3:68952499-68952518 None:intergenic 30.0%
TCTTAGTGTAACATTAGTTC+TGG + chr3_3:68952558-68952577 Msa0467560:intron 30.0%
! ACTGGACTTCTAAAAAAAGA+TGG - chr3_3:68952699-68952718 None:intergenic 30.0%
ACATTCACATTCACATTCAC+GGG - chr3_3:68945238-68945257 None:intergenic 35.0%
CACATTCACATTCACATTCA+CGG - chr3_3:68945239-68945258 None:intergenic 35.0%
AAATGGAGAAGAAAGATTGG+TGG - chr3_3:68945270-68945289 None:intergenic 35.0%
ATTGAAAGGTGAAGTTGTTG+TGG - chr3_3:68945312-68945331 None:intergenic 35.0%
GGAATGTGAAGAAGATTGAA+AGG - chr3_3:68945326-68945345 None:intergenic 35.0%
GAGATTGTTGAGCATATATG+TGG - chr3_3:68945400-68945419 None:intergenic 35.0%
!!! TTGCTTTTAGTTTACCATGG+AGG + chr3_3:68945470-68945489 Msa0467560:intron 35.0%
!!! GAAGAGTGTATTTTGGTTCT+TGG - chr3_3:68945505-68945524 None:intergenic 35.0%
GAGGAAAAAAAGCTACCAAA+AGG + chr3_3:68945641-68945660 Msa0467560:CDS 35.0%
TGGTCAGTTAACAAATTTGG+TGG + chr3_3:68945671-68945690 Msa0467560:CDS 35.0%
! AAATTTGGTGGAACATGTGT+GGG + chr3_3:68945683-68945702 Msa0467560:CDS 35.0%
! TGAAGAGAAGCATAGCTTAA+CGG + chr3_3:68945871-68945890 Msa0467560:CDS 35.0%
ATGCTTCAAGCTATTGACAT+AGG + chr3_3:68945971-68945990 Msa0467560:CDS 35.0%
AAAGAAGCAGAACAAAAGAG+AGG - chr3_3:68946001-68946020 None:intergenic 35.0%
!! AAGTAGAAGCTAGTTGATAG+TGG - chr3_3:68946417-68946436 None:intergenic 35.0%
!! TGGTAAAAAGTAGTGGATGA+TGG + chr3_3:68946533-68946552 Msa0467560:intron 35.0%
! GCAAAACTGTTAGCTTATAG+TGG - chr3_3:68946681-68946700 None:intergenic 35.0%
!! TATAGACACTAAGGCACTTT+TGG - chr3_3:68946708-68946727 None:intergenic 35.0%
! GCAAAACTGTTAGCTTATAG+TGG - chr3_3:68946681-68946700 None:intergenic 35.0%
AAAAGTAGGTACAGACACTA+AGG - chr3_3:68946780-68946799 None:intergenic 35.0%
! GCATGCATATTTACCTGTTT+TGG + chr3_3:68946847-68946866 Msa0467560:intron 35.0%
TTCATTTCTCTCATCATGCA+TGG + chr3_3:68946996-68947015 Msa0467560:intron 35.0%
TGCTGAACAAGAAATACTGT+TGG - chr3_3:68947055-68947074 None:intergenic 35.0%
AACAGGATCACAGTTAAGAA+AGG - chr3_3:68947189-68947208 None:intergenic 35.0%
!! ATCCTTTACTGACTTAGTTG+TGG + chr3_3:68947444-68947463 Msa0467560:CDS 35.0%
!! TCCTTTACTGACTTAGTTGT+GGG + chr3_3:68947445-68947464 Msa0467560:CDS 35.0%
TAGGTAGAACAATTCTTAGC+CGG + chr3_3:68947531-68947550 Msa0467560:intron 35.0%
!! TCAAGTTGATCCTGATTACT+TGG + chr3_3:68947749-68947768 Msa0467560:CDS 35.0%
TGTTCAGTTTCCAAGTAATC+AGG - chr3_3:68947762-68947781 None:intergenic 35.0%
GTACTCTCTTAATCCATCTA+AGG + chr3_3:68947797-68947816 Msa0467560:CDS 35.0%
GTAGCAATGATTACCTTAGA+TGG - chr3_3:68947813-68947832 None:intergenic 35.0%
! TCTAAGGTAATCATTGCTAC+TGG + chr3_3:68947813-68947832 Msa0467560:CDS 35.0%
ACTATACACACCATCAACAT+CGG - chr3_3:68947952-68947971 None:intergenic 35.0%
TATAGTGCAGATCCTAGAAA+AGG + chr3_3:68947966-68947985 Msa0467560:CDS 35.0%
! AAGCAGAACAAACCTTTTCT+AGG - chr3_3:68947981-68948000 None:intergenic 35.0%
AAAATCACAGCATCACTAAC+TGG - chr3_3:68948207-68948226 None:intergenic 35.0%
TTCTTGTGCCCTTAAAATTC+AGG + chr3_3:68948297-68948316 Msa0467560:intron 35.0%
!!! CATCTTGTGCAGTCTTATTT+TGG + chr3_3:68948338-68948357 Msa0467560:intron 35.0%
ATTAGTCCTGTTATTCGCTA+TGG + chr3_3:68948386-68948405 Msa0467560:CDS 35.0%
CTTTACAACGATAGACAACT+TGG + chr3_3:68948523-68948542 Msa0467560:CDS 35.0%
TTGGCACTTGTAAATGTAGA+AGG + chr3_3:68948542-68948561 Msa0467560:CDS 35.0%
TGGCACTTGTAAATGTAGAA+GGG + chr3_3:68948543-68948562 Msa0467560:CDS 35.0%
TACTGCGCTAAAAATAGTAC+TGG - chr3_3:68948735-68948754 None:intergenic 35.0%
CATGTAACTGTGGATAAACA+AGG - chr3_3:68948824-68948843 None:intergenic 35.0%
CAGTTTCATACATGTAACTG+TGG - chr3_3:68948834-68948853 None:intergenic 35.0%
! ACAGCTTTTACTTCTTTCTC+AGG - chr3_3:68948924-68948943 None:intergenic 35.0%
TGTTATAGCAGAATTGGAGT+TGG - chr3_3:68949008-68949027 None:intergenic 35.0%
GCATGTTGTTATAGCAGAAT+TGG - chr3_3:68949014-68949033 None:intergenic 35.0%
AAAGTATGTAACCACTTCTC+AGG + chr3_3:68949133-68949152 Msa0467560:intron 35.0%
TTCCCTTTCTTTAATGTCCA+GGG - chr3_3:68949403-68949422 None:intergenic 35.0%
GACATTAAAGAAAGGGAACA+AGG + chr3_3:68949405-68949424 Msa0467560:intron 35.0%
! AATATCCTTGCTATAGCACA+AGG + chr3_3:68949635-68949654 Msa0467560:CDS 35.0%
AAGATTCTATAAAGGCTCTG+CGG + chr3_3:68949696-68949715 Msa0467560:CDS 35.0%
GTGAGTCATAAAATCTGGAA+TGG - chr3_3:68949727-68949746 None:intergenic 35.0%
GGTTTGTGAGTCATAAAATC+TGG - chr3_3:68949732-68949751 None:intergenic 35.0%
GTAATTGGACCTGGATTAAT+TGG + chr3_3:68949767-68949786 Msa0467560:CDS 35.0%
!! ACATTGATTTGCGTGTAATG+GGG + chr3_3:68950034-68950053 Msa0467560:CDS 35.0%
GACATCAGTTAACAAATTCC+AGG - chr3_3:68950375-68950394 None:intergenic 35.0%
AGAGAAATTCGAGAGGAAAA+AGG + chr3_3:68950496-68950515 Msa0467560:CDS 35.0%
TGTTATCACCCCCAATAAAA+AGG + chr3_3:68950654-68950673 Msa0467560:CDS 35.0%
CCCAATAAAAAGGCAAATTC+AGG + chr3_3:68950664-68950683 Msa0467560:CDS 35.0%
ACAGCAAGGTTACATAACAA+TGG - chr3_3:68950727-68950746 None:intergenic 35.0%
! TATGTTGATTGAAGACAGCA+AGG - chr3_3:68950741-68950760 None:intergenic 35.0%
AAATCAACAACATTTGCCAC+TGG - chr3_3:68950798-68950817 None:intergenic 35.0%
TCTCTTGCTTCTAGTATTTG+AGG + chr3_3:68950996-68951015 Msa0467560:intron 35.0%
TACTTCTATGAAGCTACTGT+TGG + chr3_3:68951052-68951071 Msa0467560:CDS 35.0%
TTCCCATTATTGGCACTTTA+CGG + chr3_3:68951083-68951102 Msa0467560:CDS 35.0%
TGCAAATTGAAGGAATCTTC+AGG + chr3_3:68951134-68951153 Msa0467560:CDS 35.0%
TGATCCACAAAAAAGACAAG+TGG - chr3_3:68951186-68951205 None:intergenic 35.0%
TTATACTGAACCAGATCCAA+GGG + chr3_3:68951470-68951489 Msa0467560:CDS 35.0%
ACAACAAACTACCACACATT+TGG - chr3_3:68951590-68951609 None:intergenic 35.0%
!! TACACAAGTTGATTTCATGG+TGG + chr3_3:68951736-68951755 Msa0467560:intron 35.0%
ATGATTTCATGAGAACTAGC+TGG + chr3_3:68951786-68951805 Msa0467560:intron 35.0%
!! TATCAGAAAGCTCTAGCTTT+AGG - chr3_3:68951922-68951941 None:intergenic 35.0%
GTTCTTACTCTTAATGGTTC+CGG - chr3_3:68951965-68951984 None:intergenic 35.0%
! GAAAACTCCTCGTCAAATTT+TGG - chr3_3:68952103-68952122 None:intergenic 35.0%
! GTTTTCAAAGAGACAAGAAG+AGG + chr3_3:68952117-68952136 Msa0467560:CDS 35.0%
TGAGTAACTAGACAGTATTC+TGG + chr3_3:68952158-68952177 Msa0467560:intron 35.0%
CTATGAAGAAAATGTCATGG+TGG - chr3_3:68952206-68952225 None:intergenic 35.0%
!! TTTGAAGGTATTGAGATACG+TGG + chr3_3:68952252-68952271 Msa0467560:intron 35.0%
!! TTGAAGGTATTGAGATACGT+GGG + chr3_3:68952253-68952272 Msa0467560:intron 35.0%
GTAGACGTGACTAATCAAAA+GGG + chr3_3:68952280-68952299 Msa0467560:CDS 35.0%
CATCCATTTGCACAATTATC+TGG + chr3_3:68952334-68952353 Msa0467560:CDS 35.0%
CATTCACATTCACATTCACG+GGG - chr3_3:68945237-68945256 None:intergenic 40.0%
GGGAAATGGAGAAGAAAGAT+TGG - chr3_3:68945273-68945292 None:intergenic 40.0%
TGGAAAATGTGGAAGGGAAA+TGG - chr3_3:68945287-68945306 None:intergenic 40.0%
AATCTTCTTCACATTCCCTC+AGG + chr3_3:68945329-68945348 Msa0467560:CDS 40.0%
TTCAGTAGATGTAGCTGTAG+AGG + chr3_3:68945622-68945641 Msa0467560:intron 40.0%
AGCTACCAAAAGGAGAAACA+TGG + chr3_3:68945651-68945670 Msa0467560:CDS 40.0%
! ACTGACCATGTTTCTCCTTT+TGG - chr3_3:68945659-68945678 None:intergenic 40.0%
! CAAATTTGGTGGAACATGTG+TGG + chr3_3:68945682-68945701 Msa0467560:CDS 40.0%
GATGTATGATCTCATCCACA+AGG + chr3_3:68945805-68945824 Msa0467560:CDS 40.0%
ACGGCACAAGAATTGTTTGA+TGG + chr3_3:68945890-68945909 Msa0467560:CDS 40.0%
TCTTTAGTCTCTGTCTCGTA+AGG + chr3_3:68946024-68946043 Msa0467560:intron 40.0%
ACGATCAAAGTAGAGCAACT+TGG - chr3_3:68946634-68946653 None:intergenic 40.0%
!! TACAGACACTAAGGCACTTT+TGG - chr3_3:68946771-68946790 None:intergenic 40.0%
TTGGTGTACTTGTGTGCATA+TGG + chr3_3:68946866-68946885 Msa0467560:intron 40.0%
GATCAAAGGAGTTTCTGTCT+TGG + chr3_3:68946906-68946925 Msa0467560:intron 40.0%
!! CGTGGAAGAGCATTACAAAA+AGG + chr3_3:68947097-68947116 Msa0467560:intron 40.0%
CACAGTTAAGAAAGGACCTT+AGG - chr3_3:68947181-68947200 None:intergenic 40.0%
TCCCACAACTAAGTCAGTAA+AGG - chr3_3:68947449-68947468 None:intergenic 40.0%
AGTCCTGGCAATCCAAAATT+TGG - chr3_3:68947575-68947594 None:intergenic 40.0%
TGATTTCCCTGAGAACCATA+GGG + chr3_3:68947594-68947613 Msa0467560:intron 40.0%
TCTTAACCCTATGGTTCTCA+GGG - chr3_3:68947603-68947622 None:intergenic 40.0%
ATCTTAACCCTATGGTTCTC+AGG - chr3_3:68947604-68947623 None:intergenic 40.0%
TTCCTTTCTACTGTGCAGAA+AGG + chr3_3:68947666-68947685 Msa0467560:intron 40.0%
TCCTTTCTACTGTGCAGAAA+GGG + chr3_3:68947667-68947686 Msa0467560:intron 40.0%
CACGAGTAGGATTTACAATG+AGG - chr3_3:68947725-68947744 None:intergenic 40.0%
TCAACTTGATCATCACGAGT+AGG - chr3_3:68947738-68947757 None:intergenic 40.0%
!! AGAGTAGTGGGAATGTTTTG+AGG - chr3_3:68947855-68947874 None:intergenic 40.0%
TGACTTCTCTGCAGCAATTA+TGG + chr3_3:68947890-68947909 Msa0467560:CDS 40.0%
GACTTCTCTGCAGCAATTAT+GGG + chr3_3:68947891-68947910 Msa0467560:CDS 40.0%
AATTATGGGCGCGATATTCA+GGG + chr3_3:68947905-68947924 Msa0467560:CDS 40.0%
! CTGCTTCTTATTTCATGTGC+TGG + chr3_3:68947995-68948014 Msa0467560:intron 40.0%
GAAGACACTGTCTTATCAAG+AGG + chr3_3:68948227-68948246 Msa0467560:CDS 40.0%
! ACTGTCTTATCAAGAGGCAT+GGG + chr3_3:68948233-68948252 Msa0467560:CDS 40.0%
ATAACAGGACTAATTGTGCG+TGG - chr3_3:68948380-68948399 None:intergenic 40.0%
! ATTTTCAACACCTCTGCTTC+TGG + chr3_3:68948431-68948450 Msa0467560:CDS 40.0%
AATAGAAGGATGGCAGATCT+TGG - chr3_3:68948459-68948478 None:intergenic 40.0%
! TTTTGTAGAACTGGAATGGC+TGG + chr3_3:68948695-68948714 Msa0467560:intron 40.0%
! TGCGCTAAAAATAGTACTGG+CGG - chr3_3:68948732-68948751 None:intergenic 40.0%
TTTAGCGCAGTAAAAGAGGT+TGG + chr3_3:68948743-68948762 Msa0467560:CDS 40.0%
AACTGTGGATAAACAAGGGA+GGG - chr3_3:68948819-68948838 None:intergenic 40.0%
TAACTGTGGATAAACAAGGG+AGG - chr3_3:68948820-68948839 None:intergenic 40.0%
AGAAGTAAAAGCTGTAGCTG+AGG + chr3_3:68948929-68948948 Msa0467560:CDS 40.0%
CTGAGCCAATGCATTGAAAA+GGG - chr3_3:68949234-68949253 None:intergenic 40.0%
TCCCTTTCTTTAATGTCCAG+GGG - chr3_3:68949402-68949421 None:intergenic 40.0%
GTTCCCTTTCTTTAATGTCC+AGG - chr3_3:68949404-68949423 None:intergenic 40.0%
AACAACCTTGTGCTATAGCA+AGG - chr3_3:68949643-68949662 None:intergenic 40.0%
AGATTCTATAAAGGCTCTGC+GGG + chr3_3:68949697-68949716 Msa0467560:CDS 40.0%
TTATGACTCACAAACCACCA+TGG + chr3_3:68949736-68949755 Msa0467560:CDS 40.0%
CACACTACTTGATCAGCTAA+GGG + chr3_3:68949793-68949812 Msa0467560:CDS 40.0%
TAGGGATCCAACAAGCATAA+TGG + chr3_3:68949942-68949961 Msa0467560:intron 40.0%
GCTAAATCCCTTGAATGCTA+AGG + chr3_3:68950111-68950130 Msa0467560:intron 40.0%
AAAGTGGAGAGAAATTCGAG+AGG + chr3_3:68950489-68950508 Msa0467560:CDS 40.0%
CAGTCTACTAAAACCGTGTT+TGG - chr3_3:68950577-68950596 None:intergenic 40.0%
!! ATCATAATGGCTTGCTATGG+CGG - chr3_3:68950611-68950630 None:intergenic 40.0%
!! GTCATCATAATGGCTTGCTA+TGG - chr3_3:68950614-68950633 None:intergenic 40.0%
TAGCAAGCCATTATGATGAC+TGG + chr3_3:68950614-68950633 Msa0467560:CDS 40.0%
AAATTCAGGACCACTTAGTG+AGG + chr3_3:68950678-68950697 Msa0467560:CDS 40.0%
ATCGTGTTTACCTCACTAAG+TGG - chr3_3:68950691-68950710 None:intergenic 40.0%
TAAACACGATTTCCTTTCGC+TGG + chr3_3:68950701-68950720 Msa0467560:intron 40.0%
AAATTGAGATCCCATACCAG+TGG + chr3_3:68950779-68950798 Msa0467560:intron 40.0%
ACAACATTTGCCACTGGTAT+GGG - chr3_3:68950792-68950811 None:intergenic 40.0%
AACAACATTTGCCACTGGTA+TGG - chr3_3:68950793-68950812 None:intergenic 40.0%
TGAGGTTAAGAGCTCTTCAA+AGG + chr3_3:68951014-68951033 Msa0467560:CDS 40.0%
TCCCATTATTGGCACTTTAC+GGG + chr3_3:68951084-68951103 Msa0467560:CDS 40.0%
! TTTTGTCACCAGTTTCGAGA+AGG - chr3_3:68951111-68951130 None:intergenic 40.0%
!!! TCCTCCACTTGTCTTTTTTG+TGG + chr3_3:68951179-68951198 Msa0467560:intron 40.0%
TCCACAAAAAAGACAAGTGG+AGG - chr3_3:68951183-68951202 None:intergenic 40.0%
! GAAAAGTGTGGATAGACAGT+TGG - chr3_3:68951253-68951272 None:intergenic 40.0%
! CACACTTTTCCCTTGTTCAA+GGG + chr3_3:68951263-68951282 Msa0467560:intron 40.0%
GTTATACTGAACCAGATCCA+AGG + chr3_3:68951469-68951488 Msa0467560:CDS 40.0%
TGGAACTGATGTTGCAAGAA+AGG + chr3_3:68951503-68951522 Msa0467560:CDS 40.0%
GTCGAATTAAGCCAAATGTG+TGG + chr3_3:68951576-68951595 Msa0467560:intron 40.0%
TACAGGTGATAATTCTTGCG+AGG + chr3_3:68951888-68951907 Msa0467560:intron 40.0%
ACAGGTGATAATTCTTGCGA+GGG + chr3_3:68951889-68951908 Msa0467560:intron 40.0%
ATAATTCTTGCGAGGGAATC+TGG + chr3_3:68951896-68951915 Msa0467560:CDS 40.0%
GGTAGACGTGACTAATCAAA+AGG + chr3_3:68952279-68952298 Msa0467560:CDS 40.0%
CGTGACTAATCAAAAGGGAA+TGG + chr3_3:68952285-68952304 Msa0467560:CDS 40.0%
GAGCCAGATAATTGTGCAAA+TGG - chr3_3:68952340-68952359 None:intergenic 40.0%
! AGCATTGCAGATTAGCTACA+AGG + chr3_3:68952623-68952642 Msa0467560:three_prime_UTR 40.0%
TTGTTGTGGCGTGGAAAATG+TGG - chr3_3:68945298-68945317 None:intergenic 45.0%
!! ACACTAAGGCACTTTTGGCA+AGG - chr3_3:68946703-68946722 None:intergenic 45.0%
!! ACACTAAGGCACTTTTGGCA+AGG - chr3_3:68946703-68946722 None:intergenic 45.0%
GCACACAAGTACACCAAAAC+AGG - chr3_3:68946863-68946882 None:intergenic 45.0%
CACACTTAATACCTTGCAGC+TGG + chr3_3:68947409-68947428 Msa0467560:intron 45.0%
! ACTGACTTAGTTGTGGGACA+TGG + chr3_3:68947451-68947470 Msa0467560:CDS 45.0%
CTGACTTAGTTGTGGGACAT+GGG + chr3_3:68947452-68947471 Msa0467560:CDS 45.0%
TGACTTAGTTGTGGGACATG+GGG + chr3_3:68947453-68947472 Msa0467560:CDS 45.0%
! CTTACCTCTCGGCCAAATTT+TGG + chr3_3:68947560-68947579 Msa0467560:intron 45.0%
CAATCCAAAATTTGGCCGAG+AGG - chr3_3:68947567-68947586 None:intergenic 45.0%
CTGATTTCCCTGAGAACCAT+AGG + chr3_3:68947593-68947612 Msa0467560:intron 45.0%
TCCCTTTCTGCACAGTAGAA+AGG - chr3_3:68947671-68947690 None:intergenic 45.0%
CTTGTGTCCATCCATTTGCA+GGG - chr3_3:68947696-68947715 None:intergenic 45.0%
CTGCAAATGGATGGACACAA+GGG + chr3_3:68947695-68947714 Msa0467560:CDS 45.0%
CCATCTCTCTTGAGAGTAGT+GGG - chr3_3:68947867-68947886 None:intergenic 45.0%
TCCATCTCTCTTGAGAGTAG+TGG - chr3_3:68947868-68947887 None:intergenic 45.0%
CAATTATGGGCGCGATATTC+AGG + chr3_3:68947904-68947923 Msa0467560:CDS 45.0%
ACCATTTGGACCGATGTTGA+TGG + chr3_3:68947939-68947958 Msa0467560:CDS 45.0%
ACCATCAACATCGGTCCAAA+TGG - chr3_3:68947943-68947962 None:intergenic 45.0%
!! TGTGCTGGTTTAACCATCAG+TGG + chr3_3:68948010-68948029 Msa0467560:intron 45.0%
CACTGTCTTATCAAGAGGCA+TGG + chr3_3:68948232-68948251 Msa0467560:CDS 45.0%
! TTATCAAGAGGCATGGGAGA+TGG + chr3_3:68948239-68948258 Msa0467560:CDS 45.0%
GTAAGTTGCACACTGGATAG+TGG + chr3_3:68948261-68948280 Msa0467560:intron 45.0%
GGTATGCCATAGCGAATAAC+AGG - chr3_3:68948395-68948414 None:intergenic 45.0%
!! AAAATAGTACTGGCGGTACC+TGG - chr3_3:68948725-68948744 None:intergenic 45.0%
AAAAGCTGTAGCTGAGGTGT+TGG + chr3_3:68948935-68948954 Msa0467560:CDS 45.0%
!! TTTGACAGCGCTTTGTTTGC+TGG + chr3_3:68948966-68948985 Msa0467560:CDS 45.0%
!! TTGACAGCGCTTTGTTTGCT+GGG + chr3_3:68948967-68948986 Msa0467560:CDS 45.0%
AATGACTGCAACCTGAGAAG+TGG - chr3_3:68949147-68949166 None:intergenic 45.0%
!!! TGCAGTATTTTGGCAGCTGT+TGG + chr3_3:68949173-68949192 Msa0467560:CDS 45.0%
!!! CTGGAGTACTTGCCATTTTC+TGG - chr3_3:68949199-68949218 None:intergenic 45.0%
CAGAAAATGGCAAGTACTCC+AGG + chr3_3:68949197-68949216 Msa0467560:CDS 45.0%
! TGCCACCCTTTTCAATGCAT+TGG + chr3_3:68949226-68949245 Msa0467560:CDS 45.0%
AGCCAATGCATTGAAAAGGG+TGG - chr3_3:68949231-68949250 None:intergenic 45.0%
CCTGAGCCAATGCATTGAAA+AGG - chr3_3:68949235-68949254 None:intergenic 45.0%
!!! CCTTTTCAATGCATTGGCTC+AGG + chr3_3:68949232-68949251 Msa0467560:CDS 45.0%
TTTCTTTAATGTCCAGGGGC+TGG - chr3_3:68949398-68949417 None:intergenic 45.0%
AGCCCCTGGACATTAAAGAA+AGG + chr3_3:68949397-68949416 Msa0467560:intron 45.0%
GCCCCTGGACATTAAAGAAA+GGG + chr3_3:68949398-68949417 Msa0467560:intron 45.0%
TCACAAACCACCATGGCAAT+GGG + chr3_3:68949743-68949762 Msa0467560:CDS 45.0%
AGTGTGCTCCCAATTAATCC+AGG - chr3_3:68949779-68949798 None:intergenic 45.0%
GCACACTACTTGATCAGCTA+AGG + chr3_3:68949792-68949811 Msa0467560:CDS 45.0%
ACTTGATCAGCTAAGGGATC+AGG + chr3_3:68949799-68949818 Msa0467560:CDS 45.0%
TGGGAAGCCATTATGCTTGT+TGG - chr3_3:68949952-68949971 None:intergenic 45.0%
CATAATGGCTTCCCAATCGA+TGG + chr3_3:68949957-68949976 Msa0467560:intron 45.0%
! TTTGCGTGTAATGGGGATCA+TGG + chr3_3:68950041-68950060 Msa0467560:CDS 45.0%
! TTGCGTGTAATGGGGATCAT+GGG + chr3_3:68950042-68950061 Msa0467560:CDS 45.0%
!! TCACAGCGATAAGGGTACTT+TGG - chr3_3:68950291-68950310 None:intergenic 45.0%
AAGGAGAGTCACAGCGATAA+GGG - chr3_3:68950299-68950318 None:intergenic 45.0%
TAAGGAGAGTCACAGCGATA+AGG - chr3_3:68950300-68950319 None:intergenic 45.0%
ACAGGTGAGTATCCAGAGTA+AGG - chr3_3:68950318-68950337 None:intergenic 45.0%
TTGATATGCAGTGTGCATCC+TGG + chr3_3:68950354-68950373 Msa0467560:intron 45.0%
! GGGGAATCGACTTAGTAAAG+TGG + chr3_3:68950473-68950492 Msa0467560:intron 45.0%
TCGAGAGGAAAAAGGTGAAG+CGG + chr3_3:68950504-68950523 Msa0467560:CDS 45.0%
AAAAGGTGAAGCGGCTGATT+TGG + chr3_3:68950513-68950532 Msa0467560:CDS 45.0%
ACATAACAATGGCCAGCGAA+AGG - chr3_3:68950716-68950735 None:intergenic 45.0%
TATGAAGCTACTGTTGGAGC+TGG + chr3_3:68951058-68951077 Msa0467560:CDS 45.0%
! CCCCGTAAAGTGCCAATAAT+GGG - chr3_3:68951088-68951107 None:intergenic 45.0%
CCCATTATTGGCACTTTACG+GGG + chr3_3:68951085-68951104 Msa0467560:CDS 45.0%
CCTTGAACAAGGGAAAAGTG+TGG - chr3_3:68951265-68951284 None:intergenic 45.0%
! CCACACTTTTCCCTTGTTCA+AGG + chr3_3:68951262-68951281 Msa0467560:intron 45.0%
!!! GGATGGCAGAGTTTTTAGTG+AGG + chr3_3:68951422-68951441 Msa0467560:CDS 45.0%
TGAGGTAGTTGCTGAAGCAA+AGG + chr3_3:68951440-68951459 Msa0467560:CDS 45.0%
GCTAGAGCTTTCTGATATCC+CGG + chr3_3:68951925-68951944 Msa0467560:CDS 45.0%
! TCCGGCACAAGATTTTCAAC+CGG - chr3_3:68951947-68951966 None:intergenic 45.0%
CGAGCTACGAAGATACAAGA+AGG + chr3_3:68952309-68952328 Msa0467560:CDS 45.0%
TATCAGCCTCTGATAGTTCG+TGG + chr3_3:68952397-68952416 Msa0467560:CDS 45.0%
CTCACTCACTCACTGCCAAA+TGG + chr3_3:68945195-68945214 Msa0467560:exon 50.0%
GTGGCGTGGAAAATGTGGAA+GGG - chr3_3:68945293-68945312 None:intergenic 50.0%
TGTGGCGTGGAAAATGTGGA+AGG - chr3_3:68945294-68945313 None:intergenic 50.0%
AAGGTGAAGTTGTTGTGGCG+TGG - chr3_3:68945307-68945326 None:intergenic 50.0%
CTTGGTGAGTCTTTCCTCCA+TGG - chr3_3:68945487-68945506 None:intergenic 50.0%
TATCCTGAGCTTCAGCCTTG+TGG - chr3_3:68945823-68945842 None:intergenic 50.0%
ACAGACATGTGCAGTTGACG+TGG + chr3_3:68947079-68947098 Msa0467560:intron 50.0%
GCCGGACTTTACTTACCTCT+CGG + chr3_3:68947549-68947568 Msa0467560:intron 50.0%
GCCGAGAGGTAAGTAAAGTC+CGG - chr3_3:68947553-68947572 None:intergenic 50.0%
! CGGCCAAATTTTGGATTGCC+AGG + chr3_3:68947569-68947588 Msa0467560:intron 50.0%
GTTCTCAGGGAAATCAGTCC+TGG - chr3_3:68947590-68947609 None:intergenic 50.0%
AGAAAGGGACTCCCTGCAAA+TGG + chr3_3:68947682-68947701 Msa0467560:intron 50.0%
CCTTGTGTCCATCCATTTGC+AGG - chr3_3:68947697-68947716 None:intergenic 50.0%
CCTGCAAATGGATGGACACA+AGG + chr3_3:68947694-68947713 Msa0467560:CDS 50.0%
CCCACTACTCTCAAGAGAGA+TGG + chr3_3:68947864-68947883 Msa0467560:CDS 50.0%
GGAGATGGTAAGTTGCACAC+TGG + chr3_3:68948254-68948273 Msa0467560:intron 50.0%
GATCTTGGTTCCAGAAGCAG+AGG - chr3_3:68948444-68948463 None:intergenic 50.0%
GGGAGGGAAACAACAAAAGC+TGG - chr3_3:68948803-68948822 None:intergenic 50.0%
! GTTTGCTGGGCGTATTTCTC+AGG + chr3_3:68948980-68948999 Msa0467560:CDS 50.0%
AAAAGGGTGGCACTAACTCC+TGG - chr3_3:68949218-68949237 None:intergenic 50.0%
CTCACAAACCACCATGGCAA+TGG + chr3_3:68949742-68949761 Msa0467560:CDS 50.0%
AATTACGCCCATTGCCATGG+TGG - chr3_3:68949753-68949772 None:intergenic 50.0%
ACCATGGCAATGGGCGTAAT+TGG + chr3_3:68949752-68949771 Msa0467560:CDS 50.0%
TCCAATTACGCCCATTGCCA+TGG - chr3_3:68949756-68949775 None:intergenic 50.0%
TGCGCAGCCAGTCATCATAA+TGG - chr3_3:68950624-68950643 None:intergenic 50.0%
! TTATGATGACTGGCTGCGCA+AGG + chr3_3:68950624-68950643 Msa0467560:CDS 50.0%
! TATGATGACTGGCTGCGCAA+GGG + chr3_3:68950625-68950644 Msa0467560:CDS 50.0%
!! GGAGCTGGTCTTCCCATTAT+TGG + chr3_3:68951073-68951092 Msa0467560:CDS 50.0%
! GCCCCGTAAAGTGCCAATAA+TGG - chr3_3:68951089-68951108 None:intergenic 50.0%
GTTGCTGAAGCAAAGGAAGC+AGG + chr3_3:68951447-68951466 Msa0467560:CDS 50.0%
GACAGATCATCCCTTGGATC+TGG - chr3_3:68951483-68951502 None:intergenic 50.0%
GATCCAAGGGATGATCTGTC+TGG + chr3_3:68951483-68951502 Msa0467560:CDS 50.0%
GTTCCAGACAGATCATCCCT+TGG - chr3_3:68951489-68951508 None:intergenic 50.0%
! CCGGCACAAGATTTTCAACC+GGG - chr3_3:68951946-68951965 None:intergenic 50.0%
CCCGGTTGAAAATCTTGTGC+CGG + chr3_3:68951943-68951962 Msa0467560:CDS 50.0%
! GGTATTGAGATACGTGGGAG+TGG + chr3_3:68952258-68952277 Msa0467560:intron 50.0%
TTGCGACTTGCCTCGTATCT+TGG + chr3_3:68952469-68952488 Msa0467560:CDS 50.0%
! AGATGGAGCACCAAGATACG+AGG - chr3_3:68952482-68952501 None:intergenic 50.0%
CATCCACAAGGCTGAAGCTC+AGG + chr3_3:68945817-68945836 Msa0467560:CDS 55.0%
CTGTAGCATGACCAGCTGCA+AGG - chr3_3:68947423-68947442 None:intergenic 55.0%
AGGGACTCCCTGCAAATGGA+TGG + chr3_3:68947686-68947705 Msa0467560:CDS 55.0%
GGGCTCGTCAAGTCACCATT+TGG + chr3_3:68947925-68947944 Msa0467560:CDS 55.0%
ACTGGAATGGCTGGTGTTCC+AGG + chr3_3:68948704-68948723 Msa0467560:CDS 55.0%
GGCAGCTGTTGGCCAGAAAA+TGG + chr3_3:68949184-68949203 Msa0467560:CDS 55.0%
GCAATGGGCGTAATTGGACC+TGG + chr3_3:68949758-68949777 Msa0467560:CDS 55.0%
CGCTGTGACTCTCCTTACTC+TGG + chr3_3:68950303-68950322 Msa0467560:intron 55.0%
TTACGGGGCCTTCTCGAAAC+TGG + chr3_3:68951100-68951119 Msa0467560:CDS 55.0%
CAAGAAGAGGCTGACACTGC+TGG + chr3_3:68952130-68952149 Msa0467560:CDS 55.0%
CCTGGTCCACGAACTATCAG+AGG - chr3_3:68952406-68952425 None:intergenic 55.0%
CCTCTGATAGTTCGTGGACC+AGG + chr3_3:68952403-68952422 Msa0467560:CDS 55.0%
ATAGTTCGTGGACCAGGAGC+TGG + chr3_3:68952409-68952428 Msa0467560:CDS 55.0%
TTGTGGGACATGGGGAGCTG+TGG + chr3_3:68947461-68947480 Msa0467560:CDS 60.0%
!! CGATGGACTATACCAGCCCC+TGG + chr3_3:68949383-68949402 Msa0467560:intron 60.0%
! GTGACTTGTGCACCAGCTCC+TGG - chr3_3:68952424-68952443 None:intergenic 60.0%
GCTGGTGCACAAGTCACAGC+TGG + chr3_3:68952427-68952446 Msa0467560:CDS 60.0%
GGTGCACAAGTCACAGCTGG+TGG + chr3_3:68952430-68952449 Msa0467560:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 68945146 68952791 68945146 ID=Msa0467560;Name=Msa0467560
chr3_3 mRNA 68945146 68952791 68945146 ID=Msa0467560-mRNA-1;Parent=Msa0467560;Name=Msa0467560-mRNA-1;_AED=0.13;_eAED=0.13;_QI=68|0.94|0.94|1|0.94|0.89|19|256|908
chr3_3 exon 68945146 68945350 68945146 ID=Msa0467560-mRNA-1:exon:16120;Parent=Msa0467560-mRNA-1
chr3_3 exon 68945480 68945532 68945480 ID=Msa0467560-mRNA-1:exon:16121;Parent=Msa0467560-mRNA-1
chr3_3 exon 68945627 68945992 68945627 ID=Msa0467560-mRNA-1:exon:16122;Parent=Msa0467560-mRNA-1
chr3_3 exon 68947428 68947516 68947428 ID=Msa0467560-mRNA-1:exon:16123;Parent=Msa0467560-mRNA-1
chr3_3 exon 68947684 68947987 68947684 ID=Msa0467560-mRNA-1:exon:16124;Parent=Msa0467560-mRNA-1
chr3_3 exon 68948208 68948260 68948208 ID=Msa0467560-mRNA-1:exon:16125;Parent=Msa0467560-mRNA-1
chr3_3 exon 68948350 68948564 68948350 ID=Msa0467560-mRNA-1:exon:16126;Parent=Msa0467560-mRNA-1
chr3_3 exon 68948703 68948790 68948703 ID=Msa0467560-mRNA-1:exon:16127;Parent=Msa0467560-mRNA-1
chr3_3 exon 68948888 68949001 68948888 ID=Msa0467560-mRNA-1:exon:16128;Parent=Msa0467560-mRNA-1
chr3_3 exon 68949155 68949253 68949155 ID=Msa0467560-mRNA-1:exon:16129;Parent=Msa0467560-mRNA-1
chr3_3 exon 68949626 68949820 68949626 ID=Msa0467560-mRNA-1:exon:16130;Parent=Msa0467560-mRNA-1
chr3_3 exon 68950009 68950091 68950009 ID=Msa0467560-mRNA-1:exon:16131;Parent=Msa0467560-mRNA-1
chr3_3 exon 68950474 68950699 68950474 ID=Msa0467560-mRNA-1:exon:16132;Parent=Msa0467560-mRNA-1
chr3_3 exon 68951010 68951155 68951010 ID=Msa0467560-mRNA-1:exon:16133;Parent=Msa0467560-mRNA-1
chr3_3 exon 68951389 68951524 68951389 ID=Msa0467560-mRNA-1:exon:16134;Parent=Msa0467560-mRNA-1
chr3_3 exon 68951893 68951976 68951893 ID=Msa0467560-mRNA-1:exon:16135;Parent=Msa0467560-mRNA-1
chr3_3 exon 68952064 68952156 68952064 ID=Msa0467560-mRNA-1:exon:16136;Parent=Msa0467560-mRNA-1
chr3_3 exon 68952259 68952532 68952259 ID=Msa0467560-mRNA-1:exon:16137;Parent=Msa0467560-mRNA-1
chr3_3 exon 68952564 68952791 68952564 ID=Msa0467560-mRNA-1:exon:16138;Parent=Msa0467560-mRNA-1
chr3_3 five_prime_UTR 68945146 68945213 68945146 ID=Msa0467560-mRNA-1:five_prime_utr;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68945214 68945350 68945214 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68945480 68945532 68945480 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68945627 68945992 68945627 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68947428 68947516 68947428 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68947684 68947987 68947684 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68948208 68948260 68948208 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68948350 68948564 68948350 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68948703 68948790 68948703 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68948888 68949001 68948888 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68949155 68949253 68949155 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68949626 68949820 68949626 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68950009 68950091 68950009 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68950474 68950699 68950474 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68951010 68951155 68951010 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68951389 68951524 68951389 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68951893 68951976 68951893 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68952064 68952156 68952064 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 CDS 68952259 68952504 68952259 ID=Msa0467560-mRNA-1:cds;Parent=Msa0467560-mRNA-1
chr3_3 three_prime_UTR 68952505 68952532 68952505 ID=Msa0467560-mRNA-1:three_prime_utr;Parent=Msa0467560-mRNA-1
chr3_3 three_prime_UTR 68952564 68952791 68952564 ID=Msa0467560-mRNA-1:three_prime_utr;Parent=Msa0467560-mRNA-1
Gene Sequence

>Msa0467560

ATGGTGTTGTTTTGCTTTTGCCCCGTGAATGTGAATGTGAATGTGAATGTGATCCACCAATCTTTCTTCTCCATTTCCCTTCCACATTTTCCACGCCACAACAACTTCACCTTTCAATCTTCTTCACATTCCCTCAGTTTACCATGGAGGAAAGACTCACCAAGAACCAAAATACACTCTTCACTTACAGTAGATGTAGCTGTAGAGGAAAAAAAGCTACCAAAAGGAGAAACATGGTCAGTTAACAAATTTGGTGGAACATGTGTGGGAAGTTCAGCAAGAATAAATAATGTTGCAGATGTAATAATCAATGATGATTCTGAGAGAAAATTAGTAGTGGTTTCTGCTATGTCAAAAGTAACAGATATGATGTATGATCTCATCCACAAGGCTGAAGCTCAGGATAAGTCTTATATATCTGCACTTGATGCTGTTGAAGAGAAGCATAGCTTAACGGCACAAGAATTGTTTGATGGAGATGATCTTGCTACTTTCTTGTCAAATTTGCATCAAGATGTTGGAAATTTAAAGGCAATGCTTCAAGCTATTGACATAGCTGGTCATGCTACAGAATCCTTTACTGACTTAGTTGTGGGACATGGGGAGCTGTGGTCTGCACAGATATTGTCTTTTGTTGTTAAGAAGAAAGGGACTCCCTGCAAATGGATGGACACAAGGGAAGTCCTCATTGTAAATCCTACTCGTGATGATCAAGTTGATCCTGATTACTTGGAAACTGAACAGAGACTTAATAAATGGTACTCTCTTAATCCATCTAAGGTAATCATTGCTACTGGATTTATAGCAAGCACACCTCAAAACATTCCCACTACTCTCAAGAGAGATGGAAGTGACTTCTCTGCAGCAATTATGGGCGCGATATTCAGGGCTCGTCAAGTCACCATTTGGACCGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGATGCTGTGATTTTGAAGACACTGTCTTATCAAGAGGCATGGGAGATGTCTTATTTTGGTGCAAATGTCTTACATCCACGCACAATTAGTCCTGTTATTCGCTATGGCATACCAATTATAATAAGGAATATTTTCAACACCTCTGCTTCTGGAACCAAGATCTGCCATCCTTCTATTATTGAAAATGAAGATAAGAAGATATTAAAAGATTATGTCAAAGGCTTTACAACGATAGACAACTTGGCACTTGTAAATGTAGAAGGAACTGGAATGGCTGGTGTTCCAGGTACCGCCAGTACTATTTTTAGCGCAGTAAAAGAGGTTGGAGCCAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGTTTTGCTGTGCCTGAGAAAGAAGTAAAAGCTGTAGCTGAGGTGTTGGAATCTATATTTGACAGCGCTTTGTTTGCTGGGCGTATTTCTCAGGTTGCAGTCATTTCAAATTGCAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGTACTCCAGGAGTTAGTGCCACCCTTTTCAATGCATTGGCTCAGGCCAACATAAATATCCTTGCTATAGCACAAGGTTGTTCTGAGTACAATGTTACTGTTGTTCTTAAGCGAGAAGATTCTATAAAGGCTCTGCGGGCTGTCCATTCCAGATTTTATGACTCACAAACCACCATGGCAATGGGCGTAATTGGACCTGGATTAATTGGGAGCACACTACTTGATCAGCTAAGGGATCAGGCAGCAACTTTGAAAGAAGAATCAAACATTGATTTGCGTGTAATGGGGATCATGGGTTCAAAGTCGATGCTCCTTGATAATTTGGGAATCGACTTAGTAAAGTGGAGAGAAATTCGAGAGGAAAAAGGTGAAGCGGCTGATTTGGAAAAATTTGTTCAAAATGTACACGGAAATCATGTTATACCAAACACGGTTTTAGTAGACTGCACAGCTGACTCCGCCATAGCAAGCCATTATGATGACTGGCTGCGCAAGGGAATACATGTTATCACCCCCAATAAAAAGGCAAATTCAGGACCACTTAGTGAGTATTTGAGGTTAAGAGCTCTTCAAAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCCATTATTGGCACTTTACGGGGCCTTCTCGAAACTGGTGACAAAATATTGCAAATTGAAGGAATCTTCAGTGGGACATTGAGTTACATCTTTAATAACTTCAAGGATGGCAGAGTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAACCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCAAGAAAGGTGATAATTCTTGCGAGGGAATCTGGCCTAAAGCTAGAGCTTTCTGATATCCCGGTTGAAAATCTTGTGCCGGAACCATTAAGAGTTAGCGCATCAACTCAAGAGTTTATGCAGAAATTACCAAAATTTGACGAGGAGTTTTCAAAGAGACAAGAAGAGGCTGACACTGCTGGAGAAGTATTGAGATACGTGGGAGTGGTAGACGTGACTAATCAAAAGGGAATGGTCGAGCTACGAAGATACAAGAAGGATCATCCATTTGCACAATTATCTGGCTCAGATAACATCATTGCATTCAGAACAAGAAGATATAGATATCAGCCTCTGATAGTTCGTGGACCAGGAGCTGGTGCACAAGTCACAGCTGGTGGAATATTCAGCGACATTTTGCGACTTGCCTCGTATCTTGGTGCTCCATCTTAG

Protein sequence

>Msa0467560

MVLFCFCPVNVNVNVNVIHQSFFSISLPHFPRHNNFTFQSSSHSLSLPWRKDSPRTKIHSSLTVDVAVEEKKLPKGETWSVNKFGGTCVGSSARINNVADVIINDDSERKLVVVSAMSKVTDMMYDLIHKAEAQDKSYISALDAVEEKHSLTAQELFDGDDLATFLSNLHQDVGNLKAMLQAIDIAGHATESFTDLVVGHGELWSAQILSFVVKKKGTPCKWMDTREVLIVNPTRDDQVDPDYLETEQRLNKWYSLNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGAIFRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTISPVIRYGIPIIIRNIFNTSASGTKICHPSIIENEDKKILKDYVKGFTTIDNLALVNVEGTGMAGVPGTASTIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLESIFDSALFAGRISQVAVISNCSILAAVGQKMASTPGVSATLFNALAQANINILAIAQGCSEYNVTVVLKREDSIKALRAVHSRFYDSQTTMAMGVIGPGLIGSTLLDQLRDQAATLKEESNIDLRVMGIMGSKSMLLDNLGIDLVKWREIREEKGEAADLEKFVQNVHGNHVIPNTVLVDCTADSAIASHYDDWLRKGIHVITPNKKANSGPLSEYLRLRALQRQSYTHYFYEATVGAGLPIIGTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRVFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRVSASTQEFMQKLPKFDEEFSKRQEEADTAGEVLRYVGVVDVTNQKGMVELRRYKKDHPFAQLSGSDNIIAFRTRRYRYQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS*