AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1455140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455140 MtrunA17_Chr8g0346901 97.315 596 16 0 1 596 1 596 0.0 1206
Msa1455140 MtrunA17_Chr7g0275661 70.352 597 163 5 1 590 1 590 0.0 834
Msa1455140 MtrunA17_Chr8g0388301 58.070 570 223 8 36 591 25 592 0.0 658
Msa1455140 MtrunA17_Chr3g0126781 58.070 570 215 6 30 588 19 575 0.0 652
Msa1455140 MtrunA17_Chr5g0396531 55.075 601 240 10 1 591 1 581 0.0 647
Msa1455140 MtrunA17_Chr8g0366091 40.411 292 144 7 270 547 150 425 2.24e-62 217
Msa1455140 MtrunA17_Chr7g0255481 38.816 304 158 7 258 547 76 365 8.11e-59 202
Msa1455140 MtrunA17_Chr5g0420771 39.731 297 141 8 269 547 155 431 2.96e-58 206
Msa1455140 MtrunA17_Chr7g0220391 39.236 288 142 7 277 547 155 426 1.73e-55 198
Msa1455140 MtrunA17_Chr7g0274921 32.544 169 102 6 26 189 67 228 7.41e-17 80.1
Msa1455140 MtrunA17_Chr7g0274921 34.615 156 90 6 38 189 5 152 2.38e-16 78.6
Msa1455140 MtrunA17_Chr1g0181441 32.544 169 102 6 26 189 65 226 7.47e-17 80.1
Msa1455140 MtrunA17_Chr1g0181441 34.615 156 90 6 38 189 3 150 2.59e-16 78.6
Msa1455140 MtrunA17_Chr4g0041751 34.615 156 90 6 38 189 3 150 1.93e-16 79.0
Msa1455140 MtrunA17_Chr4g0041751 34.266 143 89 4 26 166 65 204 2.10e-11 64.3
Msa1455140 MtrunA17_Chr6g0475961 34.615 156 90 6 38 189 6 153 3.77e-16 77.4
Msa1455140 MtrunA17_Chr6g0475961 35.537 121 75 3 28 146 70 189 3.06e-12 65.9
Msa1455140 MtrunA17_Chr8g0377821 32.544 169 102 6 26 189 73 234 5.76e-16 80.1
Msa1455140 MtrunA17_Chr8g0377821 32.544 169 102 6 26 189 149 310 5.76e-16 80.1
Msa1455140 MtrunA17_Chr8g0377821 32.544 169 102 6 26 189 225 386 5.76e-16 80.1
Msa1455140 MtrunA17_Chr8g0377821 34.615 156 90 6 38 189 11 158 1.88e-15 78.6
Msa1455140 MtrunA17_Chr4g0046801 32.544 169 102 6 26 189 68 229 9.04e-16 80.1
Msa1455140 MtrunA17_Chr4g0046801 32.544 169 102 6 26 189 144 305 9.04e-16 80.1
Msa1455140 MtrunA17_Chr4g0046801 32.544 169 102 6 26 189 220 381 9.04e-16 80.1
Msa1455140 MtrunA17_Chr4g0046801 32.544 169 102 6 26 189 296 457 9.04e-16 80.1
Msa1455140 MtrunA17_Chr4g0046801 34.615 156 90 6 38 189 6 153 2.72e-15 78.6
Msa1455140 MtrunA17_Chr4g0041641 32.544 169 102 6 26 189 69 230 9.08e-16 80.1
Msa1455140 MtrunA17_Chr4g0041641 32.544 169 102 6 26 189 145 306 9.08e-16 80.1
Msa1455140 MtrunA17_Chr4g0041641 32.544 169 102 6 26 189 221 382 9.08e-16 80.1
Msa1455140 MtrunA17_Chr4g0041641 32.544 169 102 6 26 189 297 458 9.08e-16 80.1
Msa1455140 MtrunA17_Chr4g0041641 34.615 156 90 6 38 189 7 154 2.64e-15 78.6
Msa1455140 MtrunA17_Chr4g0048591 32.544 169 102 6 26 189 220 381 9.20e-16 80.5
Msa1455140 MtrunA17_Chr4g0048591 32.544 169 102 6 26 189 68 229 1.12e-15 80.1
Msa1455140 MtrunA17_Chr4g0048591 32.544 169 102 6 26 189 144 305 1.12e-15 80.1
Msa1455140 MtrunA17_Chr4g0048591 32.544 169 102 6 26 189 372 533 1.12e-15 80.1
Msa1455140 MtrunA17_Chr4g0048591 34.615 156 90 6 38 189 6 153 3.32e-15 78.6
Msa1455140 MtrunA17_Chr4g0048591 31.953 169 103 6 26 189 296 457 1.05e-14 77.0
Msa1455140 MtrunA17_Chr4g0041701 32.544 169 102 6 26 189 65 226 1.30e-15 80.1
Msa1455140 MtrunA17_Chr4g0041701 32.544 169 102 6 26 189 141 302 1.30e-15 80.1
Msa1455140 MtrunA17_Chr4g0041701 32.544 169 102 6 26 189 217 378 1.30e-15 80.1
Msa1455140 MtrunA17_Chr4g0041701 32.544 169 102 6 26 189 293 454 1.30e-15 80.1
Msa1455140 MtrunA17_Chr4g0041701 32.544 169 102 6 26 189 369 530 1.30e-15 80.1
Msa1455140 MtrunA17_Chr4g0041701 34.615 156 90 6 38 189 3 150 3.86e-15 78.6
Msa1455140 MtrunA17_Chr8g0342711 32.544 169 102 6 26 189 68 229 1.35e-15 80.1
Msa1455140 MtrunA17_Chr8g0342711 32.544 169 102 6 26 189 144 305 1.35e-15 80.1
Msa1455140 MtrunA17_Chr8g0342711 32.544 169 102 6 26 189 220 381 1.35e-15 80.1
Msa1455140 MtrunA17_Chr8g0342711 32.544 169 102 6 26 189 296 457 1.35e-15 80.1
Msa1455140 MtrunA17_Chr8g0342711 32.544 169 102 6 26 189 372 533 1.35e-15 80.1
Msa1455140 MtrunA17_Chr8g0342711 34.615 156 90 6 38 189 6 153 4.03e-15 78.6
Msa1455140 MtrunA17_Chr4g0046831 32.544 169 102 6 26 189 68 229 1.58e-15 80.1
Msa1455140 MtrunA17_Chr4g0046831 32.544 169 102 6 26 189 144 305 1.58e-15 80.1
Msa1455140 MtrunA17_Chr4g0046831 32.544 169 102 6 26 189 356 517 1.58e-15 80.1
Msa1455140 MtrunA17_Chr4g0046831 32.544 169 102 6 26 189 432 593 1.58e-15 80.1
Msa1455140 MtrunA17_Chr4g0046831 34.615 156 90 6 38 189 6 153 4.58e-15 78.6
Msa1455140 MtrunA17_Chr4g0037241 34.437 151 87 6 38 184 3 145 1.54e-14 71.2
Msa1455140 MtrunA17_Chr5g0444101 34.437 151 87 6 38 184 3 145 1.54e-14 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455140 AT2G46500.1 58.319 595 207 9 1 588 1 561 0.0 682
Msa1455140 AT2G46500.2 58.319 595 207 9 1 588 1 561 0.0 682
Msa1455140 AT5G24240.1 55.058 603 232 12 1 593 1 574 0.0 628
Msa1455140 AT5G24240.2 55.058 603 232 12 1 593 1 574 0.0 628
Msa1455140 AT2G46500.3 53.991 426 156 8 1 419 1 393 1.44e-144 425
Msa1455140 AT2G03890.1 39.871 311 154 8 254 547 139 433 3.38e-61 214
Msa1455140 AT1G13640.1 40.741 297 139 7 272 547 149 429 8.98e-61 213
Msa1455140 AT1G13640.2 40.741 297 139 7 272 547 149 429 8.98e-61 213
Msa1455140 AT1G26270.1 38.333 300 152 7 265 547 146 429 8.27e-57 202
Msa1455140 AT2G40850.1 38.636 308 161 6 280 572 120 414 1.68e-55 197
Msa1455140 AT3G56600.2 39.249 293 148 7 280 556 100 378 2.36e-54 193
Msa1455140 AT3G56600.1 39.249 293 148 7 280 556 103 381 2.45e-54 193
Msa1455140 AT3G56600.3 39.249 293 148 7 280 556 103 381 2.45e-54 193
Msa1455140 AT2G03890.2 42.174 230 102 6 334 547 99 313 5.24e-48 176
Msa1455140 AT1G27570.2 29.658 263 162 7 344 595 387 637 3.02e-25 110
Msa1455140 AT1G27570.1 32.227 211 125 5 344 543 396 599 3.16e-25 110
Msa1455140 AT4G02890.2 32.544 169 102 6 26 189 65 226 1.19e-16 80.1
Msa1455140 AT4G02890.2 34.615 156 90 6 38 189 3 150 3.82e-16 78.6
Msa1455140 AT4G02890.1 32.544 169 102 6 26 189 65 226 1.19e-16 80.1
Msa1455140 AT4G02890.1 34.615 156 90 6 38 189 3 150 3.82e-16 78.6
Msa1455140 AT4G05050.2 32.544 169 102 6 26 189 65 226 1.19e-16 80.1
Msa1455140 AT4G05050.2 34.615 156 90 6 38 189 3 150 3.82e-16 78.6
Msa1455140 AT4G05050.1 32.544 169 102 6 26 189 65 226 1.19e-16 80.1
Msa1455140 AT4G05050.1 34.615 156 90 6 38 189 3 150 3.82e-16 78.6
Msa1455140 AT4G05050.3 32.544 169 102 6 26 189 65 226 1.19e-16 80.1
Msa1455140 AT4G05050.3 34.615 156 90 6 38 189 3 150 3.82e-16 78.6
Msa1455140 AT4G05320.7 34.615 156 90 6 38 189 3 150 1.21e-16 77.8
Msa1455140 AT4G05050.4 34.615 156 90 6 38 189 3 150 1.21e-16 77.8
Msa1455140 AT4G05320.5 32.544 169 102 6 26 189 65 226 3.65e-16 80.1
Msa1455140 AT4G05320.5 32.544 169 102 6 26 189 141 302 3.65e-16 80.1
Msa1455140 AT4G05320.5 34.615 156 90 6 38 189 3 150 1.14e-15 78.6
Msa1455140 AT4G05320.8 32.544 169 102 6 26 189 65 226 3.65e-16 80.1
Msa1455140 AT4G05320.8 32.544 169 102 6 26 189 141 302 3.65e-16 80.1
Msa1455140 AT4G05320.8 34.615 156 90 6 38 189 3 150 1.14e-15 78.6
Msa1455140 AT4G02890.3 32.544 169 102 6 26 189 65 226 3.65e-16 80.1
Msa1455140 AT4G02890.3 32.544 169 102 6 26 189 141 302 3.65e-16 80.1
Msa1455140 AT4G02890.3 34.615 156 90 6 38 189 3 150 1.14e-15 78.6
Msa1455140 AT4G02890.4 32.544 169 102 6 26 189 65 226 3.65e-16 80.1
Msa1455140 AT4G02890.4 32.544 169 102 6 26 189 141 302 3.65e-16 80.1
Msa1455140 AT4G02890.4 34.615 156 90 6 38 189 3 150 1.14e-15 78.6
Msa1455140 AT5G03240.3 32.544 169 102 6 26 189 65 226 3.95e-16 80.1
Msa1455140 AT5G03240.3 32.544 169 102 6 26 189 141 302 3.95e-16 80.1
Msa1455140 AT5G03240.3 34.615 156 90 6 38 189 3 150 1.22e-15 78.6
Msa1455140 AT5G03240.2 32.544 169 102 6 26 189 65 226 3.95e-16 80.1
Msa1455140 AT5G03240.2 32.544 169 102 6 26 189 141 302 3.95e-16 80.1
Msa1455140 AT5G03240.2 34.615 156 90 6 38 189 3 150 1.22e-15 78.6
Msa1455140 AT5G03240.1 32.544 169 102 6 26 189 65 226 3.95e-16 80.1
Msa1455140 AT5G03240.1 32.544 169 102 6 26 189 141 302 3.95e-16 80.1
Msa1455140 AT5G03240.1 34.615 156 90 6 38 189 3 150 1.22e-15 78.6
Msa1455140 AT5G20620.2 32.544 169 102 6 26 189 65 226 3.95e-16 80.1
Msa1455140 AT5G20620.2 32.544 169 102 6 26 189 141 302 3.95e-16 80.1
Msa1455140 AT5G20620.2 34.615 156 90 6 38 189 3 150 1.22e-15 78.6
Msa1455140 AT1G65350.1 34.641 153 93 5 38 189 3 149 4.94e-16 80.1
Msa1455140 AT1G65350.1 31.361 169 103 6 26 189 65 225 2.50e-14 74.7
Msa1455140 AT1G65350.1 33.099 142 90 4 26 165 140 278 1.28e-12 69.7
Msa1455140 AT4G05320.1 32.544 169 102 6 26 189 65 226 8.18e-16 80.1
Msa1455140 AT4G05320.1 32.544 169 102 6 26 189 141 302 8.18e-16 80.1
Msa1455140 AT4G05320.1 32.544 169 102 6 26 189 217 378 8.18e-16 80.1
Msa1455140 AT4G05320.1 34.615 156 90 6 38 189 3 150 2.54e-15 78.6
Msa1455140 AT4G05320.6 32.544 169 102 6 26 189 65 226 8.18e-16 80.1
Msa1455140 AT4G05320.6 32.544 169 102 6 26 189 141 302 8.18e-16 80.1
Msa1455140 AT4G05320.6 32.544 169 102 6 26 189 217 378 8.18e-16 80.1
Msa1455140 AT4G05320.6 34.615 156 90 6 38 189 3 150 2.54e-15 78.6
Msa1455140 AT4G05320.3 32.544 169 102 6 26 189 65 226 8.18e-16 80.1
Msa1455140 AT4G05320.3 32.544 169 102 6 26 189 141 302 8.18e-16 80.1
Msa1455140 AT4G05320.3 32.544 169 102 6 26 189 217 378 8.18e-16 80.1
Msa1455140 AT4G05320.3 34.615 156 90 6 38 189 3 150 2.54e-15 78.6
Msa1455140 AT5G20620.1 32.544 169 102 6 26 189 65 226 8.71e-16 80.1
Msa1455140 AT5G20620.1 32.544 169 102 6 26 189 141 302 8.71e-16 80.1
Msa1455140 AT5G20620.1 32.544 169 102 6 26 189 217 378 8.71e-16 80.1
Msa1455140 AT5G20620.1 34.615 156 90 6 38 189 3 150 2.60e-15 78.6
Msa1455140 AT4G05320.2 32.544 169 102 6 26 189 65 226 1.23e-15 80.1
Msa1455140 AT4G05320.2 32.544 169 102 6 26 189 141 302 1.23e-15 80.1
Msa1455140 AT4G05320.2 32.544 169 102 6 26 189 217 378 1.23e-15 80.1
Msa1455140 AT4G05320.2 32.544 169 102 6 26 189 293 454 1.23e-15 80.1
Msa1455140 AT4G05320.2 34.615 156 90 6 38 189 3 150 3.71e-15 78.6
Msa1455140 AT4G05320.4 32.544 169 102 6 26 189 65 226 1.23e-15 80.1
Msa1455140 AT4G05320.4 32.544 169 102 6 26 189 141 302 1.23e-15 80.1
Msa1455140 AT4G05320.4 32.544 169 102 6 26 189 217 378 1.23e-15 80.1
Msa1455140 AT4G05320.4 32.544 169 102 6 26 189 293 454 1.23e-15 80.1
Msa1455140 AT4G05320.4 34.615 156 90 6 38 189 3 150 3.71e-15 78.6
Msa1455140 AT1G55060.1 33.333 156 92 6 38 189 79 226 4.89e-15 75.5
Msa1455140 AT1G55060.1 32.450 151 91 5 43 189 7 150 2.76e-14 73.2
Msa1455140 AT1G31340.1 35.099 151 86 6 38 184 3 145 8.06e-15 72.8
Msa1455140 AT2G35635.1 34.459 148 91 5 38 184 3 145 8.22e-15 72.8
Msa1455140 AT5G37640.1 35.461 141 80 5 53 189 19 152 1.82e-14 75.1
Msa1455140 AT5G37640.1 33.333 165 98 6 28 187 69 226 2.72e-14 74.7
Msa1455140 AT5G37640.1 31.361 169 105 6 26 189 143 305 3.26e-13 71.6
Msa1455140 AT3G09790.2 34.532 139 80 5 53 187 19 150 5.11e-12 69.3
Msa1455140 AT3G09790.2 32.692 156 92 6 26 171 67 219 2.75e-11 67.0
Msa1455140 AT3G09790.1 34.532 139 80 5 53 187 19 150 5.11e-12 69.3
Msa1455140 AT3G09790.1 32.692 156 92 6 26 171 67 219 2.75e-11 67.0

Find 198 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTAGGTTTGGTCTTC+TGG 0.077920 tig0035590:+6888 Msa1455140:five_prime_UTR
TTTACACCAATCACAAAATT+AGG 0.088539 tig0035590:+6760 Msa1455140:five_prime_UTR
AATTAAAGCTTAACTATATC+TGG 0.127212 tig0035590:-6931 None:intergenic
CGGGAAGGAGTATACCTTTC+AGG 0.160755 tig0035590:+7447 Msa1455140:CDS
GGAAGTTGCTGCTTATATTT+TGG 0.175078 tig0035590:+8122 Msa1455140:CDS
GTACCTTTGAATGGCTTTAT+TGG 0.207540 tig0035590:+9138 Msa1455140:CDS
AGTGGCCGCCGATCATTATT+TGG 0.232723 tig0035590:+8156 Msa1455140:CDS
AGGGGAAAGGGTTTGTTAAT+TGG 0.233382 tig0035590:-6653 None:intergenic
TACACCTCTTAATTAATTAT+AGG 0.234160 tig0035590:+9685 Msa1455140:three_prime_UTR
TCTGAAGCTAGTTCAACTTT+AGG 0.241682 tig0035590:-7859 None:intergenic
TAATGGAAGTTGTGAGGATA+TGG 0.244475 tig0035590:+8299 Msa1455140:CDS
GGATGCTGTTTCTGAGATTA+TGG 0.256316 tig0035590:+9454 Msa1455140:CDS
GATGCAGAGGAAGGTGATTA+TGG 0.260708 tig0035590:+7724 Msa1455140:CDS
ATTGTAACATTGGTAGAATT+AGG 0.262976 tig0035590:+6991 Msa1455140:five_prime_UTR
TGAAATGGGACATCACTTAT+TGG 0.267435 tig0035590:+9730 Msa1455140:three_prime_UTR
GAGTTGGCCAAGGAGCTTTC+AGG 0.267673 tig0035590:+8100 Msa1455140:CDS
CTGAAGCTAGTTCAACTTTA+GGG 0.274765 tig0035590:-7858 None:intergenic
TCCTGGTAGAGGTCTTATTT+TGG 0.283272 tig0035590:+7819 Msa1455140:CDS
TTGAATTCTGCTATAGGATT+TGG 0.285711 tig0035590:+9523 Msa1455140:three_prime_UTR
ACGATGAGAAATTAAGCTTC+TGG 0.294300 tig0035590:+6796 Msa1455140:five_prime_UTR
TTTAACAAAATATCACAAAA+AGG 0.297736 tig0035590:-6857 None:intergenic
AATTCCTTGCTCAAGGATTA+TGG 0.299085 tig0035590:+7349 Msa1455140:CDS
TTGATTAGGTTTGGTCTTCT+GGG 0.300503 tig0035590:+6889 Msa1455140:five_prime_UTR
CACACAACCTCCTGCTGTTC+AGG 0.306369 tig0035590:-7538 None:intergenic
TGAACTAGCTTCAGAGGTTT+GGG 0.315716 tig0035590:+7867 Msa1455140:CDS
TTGAACTAGCTTCAGAGGTT+TGG 0.321874 tig0035590:+7866 Msa1455140:CDS
ATTGCCCTTCTGAAGTTTCA+TGG 0.323760 tig0035590:+9230 Msa1455140:CDS
TACTTTATGCTCGACTCAAC+AGG 0.327135 tig0035590:+7967 Msa1455140:CDS
CGAAGGAAATGTATTGCATT+TGG 0.327882 tig0035590:+7378 Msa1455140:CDS
AACAATTTCTCCCTTGAAAC+AGG 0.332507 tig0035590:-7115 None:intergenic
TTACACCAATCACAAAATTA+GGG 0.337991 tig0035590:+6761 Msa1455140:five_prime_UTR
TTGTAACATTGGTAGAATTA+GGG 0.341971 tig0035590:+6992 Msa1455140:five_prime_UTR
AATTAAGAGGTGTAAATATA+AGG 0.346662 tig0035590:-9676 None:intergenic
GAGGGTTTGGCTGCTAAGTT+TGG 0.346981 tig0035590:+8252 Msa1455140:CDS
TCATTAAGAATTATAATTGC+TGG 0.348757 tig0035590:-9498 None:intergenic
ATGAAGTTGAATTCTGCTAT+AGG 0.360435 tig0035590:+9517 Msa1455140:exon
AGCAGGAGGTTGTGTGTAAC+GGG 0.363517 tig0035590:+7545 Msa1455140:CDS
ATTTAACCATCCAGAGGGTT+TGG 0.373470 tig0035590:+8239 Msa1455140:CDS
TGGTGTTCCTCCGACTGTTA+TGG 0.392395 tig0035590:+8197 Msa1455140:CDS
TTGAAAGGTGTAAGGATGTT+TGG 0.396056 tig0035590:+7470 Msa1455140:CDS
GAGTTGTTTGTTGTTGTTGT+TGG 0.400253 tig0035590:-6696 None:intergenic
CGATGAGAAATTAAGCTTCT+GGG 0.403201 tig0035590:+6797 Msa1455140:five_prime_UTR
ATGATAAACACTACATATGA+TGG 0.407373 tig0035590:+7892 Msa1455140:CDS
CAAATGTTCGTGGAGAATAA+TGG 0.408480 tig0035590:+8282 Msa1455140:CDS
ACTCTTTGTTCAATGATTCT+CGG 0.410247 tig0035590:-9361 None:intergenic
TTCGTTTATCTTTCGTACTC+GGG 0.410681 tig0035590:+7199 Msa1455140:CDS
ACTTTAGGGTTAACAACAAC+CGG 0.411541 tig0035590:-7844 None:intergenic
TTGAAGATTGTACCTTTGAA+TGG 0.413144 tig0035590:+9129 Msa1455140:CDS
CTGAAAGGTATACTCCTTCC+CGG 0.413982 tig0035590:-7446 None:intergenic
AATGAATTGTGGAACAAGAT+AGG 0.414296 tig0035590:-6577 None:intergenic
GAAATGGGACATCACTTATT+GGG 0.414712 tig0035590:+9731 Msa1455140:three_prime_UTR
TTTCGTTTATCTTTCGTACT+CGG 0.416740 tig0035590:+7198 Msa1455140:CDS
TCAATGATCTCTGGAGAGTA+TGG 0.416964 tig0035590:-9176 None:intergenic
CACAAAATTAGGGTTTATAG+AGG 0.417605 tig0035590:+6771 Msa1455140:five_prime_UTR
TAAGAAACAGATTGCGGAAA+AGG 0.427549 tig0035590:+7498 Msa1455140:CDS
CCTTCTGAAGTTTCATGGAT+GGG 0.429432 tig0035590:+9235 Msa1455140:CDS
AACAAAAGTTGGTTTGTAAC+GGG 0.431768 tig0035590:+7308 Msa1455140:CDS
TCAGTGTGAGAACTTGTTCC+GGG 0.431902 tig0035590:+7428 Msa1455140:CDS
GGCCATGAGAAAGGATTTGC+TGG 0.432160 tig0035590:+8177 Msa1455140:CDS
TCAGAAGCATGGTCGAGATT+CGG 0.435796 tig0035590:-9286 None:intergenic
AGTTGGCCAAGGAGCTTTCA+GGG 0.436183 tig0035590:+8101 Msa1455140:CDS
CTCAAAATTCAGAGGAATGA+AGG 0.437343 tig0035590:+7274 Msa1455140:CDS
TCATTATTTGGCCATGAGAA+AGG 0.439250 tig0035590:+8168 Msa1455140:CDS
TATGCTTTGTAGAAGTGAAA+TGG 0.442264 tig0035590:+9715 Msa1455140:three_prime_UTR
CCACTCTGAGTCCTGTTTCA+AGG 0.444085 tig0035590:+7104 Msa1455140:CDS
AGGCAGTATCCATGATCAAT+TGG 0.445883 tig0035590:-8453 None:intergenic
ATCAGGCTTCCAATGGCAAA+AGG 0.446075 tig0035590:-9335 None:intergenic
TTTATGTAGTCAATGATCTC+TGG 0.446436 tig0035590:-9185 None:intergenic
GTACCCTCTGCAGATCTGAT+TGG 0.447790 tig0035590:-7934 None:intergenic
CTTTCAGGTTGAAAGGTGTA+AGG 0.447803 tig0035590:+7462 Msa1455140:CDS
ATCAGTGTGAGAACTTGTTC+CGG 0.450830 tig0035590:+7427 Msa1455140:CDS
ATAACCTATAATTAATTAAG+AGG 0.453249 tig0035590:-9689 None:intergenic
TCCGATGCGTGTGCTACCTT+CGG 0.458516 tig0035590:+7231 Msa1455140:CDS
TGTTGTTGGAATTCAAGATT+CGG 0.463060 tig0035590:-6682 None:intergenic
CCCTTCTGAAGTTTCATGGA+TGG 0.463805 tig0035590:+9234 Msa1455140:CDS
CAGTGATTTGTACAGATATG+TGG 0.472757 tig0035590:+6961 Msa1455140:five_prime_UTR
ATGCAGAGGAAGGTGATTAT+GGG 0.474524 tig0035590:+7725 Msa1455140:CDS
AGTGACAAACAAACAAAAGT+TGG 0.478794 tig0035590:+7297 Msa1455140:CDS
TCAATGATTCTCGGCACATC+AGG 0.479856 tig0035590:-9352 None:intergenic
AATTCAAGATTCGGAAAAGA+AGG 0.480058 tig0035590:-6673 None:intergenic
GCACTCGATTCTGTTCTTCC+TGG 0.480120 tig0035590:+9410 Msa1455140:CDS
AACTTAGCAGCCAAACCCTC+TGG 0.480352 tig0035590:-8249 None:intergenic
CAATATCTTCTTCAGCATCA+AGG 0.481634 tig0035590:-9211 None:intergenic
TAGCAAAGAAGATGCGAGAA+AGG 0.482978 tig0035590:+7759 Msa1455140:CDS
GGATTACATAATCCATTGGT+TGG 0.483000 tig0035590:-7142 None:intergenic
GAGAAGAGAAGAATGAATTG+TGG 0.483865 tig0035590:-6588 None:intergenic
ATGCTTTGTAGAAGTGAAAT+GGG 0.485180 tig0035590:+9716 Msa1455140:three_prime_UTR
CACTCTGAGTCCTGTTTCAA+GGG 0.486062 tig0035590:+7105 Msa1455140:CDS
GCAAATGCAGATAGGCATGC+TGG 0.489456 tig0035590:+8381 Msa1455140:CDS
CAACTTCCCTGAAAGCTCCT+TGG 0.490176 tig0035590:-8107 None:intergenic
CAAATGCAATACATTTCCTT+CGG 0.490209 tig0035590:-7377 None:intergenic
CATCACTTATTGGGAAATTG+TGG 0.491653 tig0035590:+9740 Msa1455140:three_prime_UTR
TGGTGATCTCATCAAGGTGC+TGG 0.493158 tig0035590:-9478 None:intergenic
AACAAAGAGTCTGTGATTGA+AGG 0.493159 tig0035590:+9374 Msa1455140:CDS
TCAGGCTTCCAATGGCAAAA+GGG 0.499240 tig0035590:-9334 None:intergenic
TTAGGTTTGGTCTTCTGGGT+TGG 0.500181 tig0035590:+6893 Msa1455140:five_prime_UTR
ACCTTTGTCGTTAGACGGTG+AGG 0.502471 tig0035590:+8059 Msa1455140:CDS
ACATATGATGGGCTAGATAG+TGG 0.509383 tig0035590:+7904 Msa1455140:CDS
TGGTTCCTTGCAAATGTTCG+TGG 0.511177 tig0035590:+8272 Msa1455140:CDS
AAATATGCGGATGTTAGTAC+AGG 0.514113 tig0035590:+7649 Msa1455140:CDS
GGTGCATAAAATTACTGTGC+TGG 0.516372 tig0035590:+8347 Msa1455140:CDS
CAGCAGGAGGTTGTGTGTAA+CGG 0.517620 tig0035590:+7544 Msa1455140:CDS
AAACAAAAGTTGGTTTGTAA+CGG 0.520140 tig0035590:+7307 Msa1455140:CDS
TCGAGAAATGCTCCTGGTAG+AGG 0.521176 tig0035590:+7808 Msa1455140:CDS
ATTAAAGCTTAACTATATCT+GGG 0.522718 tig0035590:-6930 None:intergenic
TGAGACTTGCAAATGCAGAT+AGG 0.524034 tig0035590:+8373 Msa1455140:CDS
AACGACAAAGGTAAACCTCT+AGG 0.535148 tig0035590:-8048 None:intergenic
GTTTGCTGATCCTGAACAGC+AGG 0.535234 tig0035590:+7528 Msa1455140:CDS
ATCAGATCTGCAGAGGGTAC+AGG 0.535943 tig0035590:+7937 Msa1455140:CDS
TGATCTCTGGAGAGTATGGC+TGG 0.536526 tig0035590:-9172 None:intergenic
AGTATACCTTTCAGGTTGAA+AGG 0.537419 tig0035590:+7455 Msa1455140:CDS
TAAAGTTGAACTAGCTTCAG+AGG 0.543230 tig0035590:+7861 Msa1455140:CDS
AATGGAAGTTGTGAGGATAT+GGG 0.547910 tig0035590:+8300 Msa1455140:CDS
TCTCGACATAATCCGTTCGA+TGG 0.553249 tig0035590:-7791 None:intergenic
GCGGAGCAATTCCTTGCTCA+AGG 0.554560 tig0035590:+7342 Msa1455140:CDS
GGTCGAGATTCGGAGAGTGC+GGG 0.554690 tig0035590:-9276 None:intergenic
AAATGAAGTGCTTACACTAG+TGG 0.555410 tig0035590:-8478 None:intergenic
CTTACACCTTTCAACCTGAA+AGG 0.556700 tig0035590:-7461 None:intergenic
AATGAAGTGCTTACACTAGT+GGG 0.557248 tig0035590:-8477 None:intergenic
CCTTTGTCGTTAGACGGTGA+GGG 0.557986 tig0035590:+8060 Msa1455140:CDS
GAGTATGGCTGGCGAGCTTG+AGG 0.559426 tig0035590:-9161 None:intergenic
GGTTTACCTTTGTCGTTAGA+CGG 0.560560 tig0035590:+8054 Msa1455140:CDS
AATATCTTCTTCAGCATCAA+GGG 0.561373 tig0035590:-9210 None:intergenic
AAATTGTTGTCTCCAACCAA+TGG 0.562278 tig0035590:+7130 Msa1455140:CDS
TCCTTCACCGGAAAAGCACC+AGG 0.562505 tig0035590:-8324 None:intergenic
CAAATGCAGATAGGCATGCT+GGG 0.565622 tig0035590:+8382 Msa1455140:CDS
GCCTATGGATGAAGAGCCGA+TGG 0.567919 tig0035590:+8014 Msa1455140:CDS
GATTCGGAAAAGAAGGGGAA+AGG 0.568192 tig0035590:-6666 None:intergenic
CAGTGGATTACATAATCCAT+TGG 0.571392 tig0035590:-7146 None:intergenic
ATTCAAGATTCGGAAAAGAA+GGG 0.572787 tig0035590:-6672 None:intergenic
ACGACAAAGGTAAACCTCTA+GGG 0.574374 tig0035590:-8047 None:intergenic
AAAGTTGGTTTGTAACGGGC+GGG 0.575171 tig0035590:+7312 Msa1455140:CDS
ATTCTCCACGAACATTTGCA+AGG 0.577079 tig0035590:-8277 None:intergenic
ATTCGGAAAAGAAGGGGAAA+GGG 0.577319 tig0035590:-6665 None:intergenic
CTAGGGTTATTCACAGCCAT+CGG 0.577439 tig0035590:-8030 None:intergenic
TGATAAACACTACATATGAT+GGG 0.578850 tig0035590:+7893 Msa1455140:CDS
TGGCTTTAGAATTGTAACAT+TGG 0.583903 tig0035590:+6981 Msa1455140:five_prime_UTR
AAGAATTCTGATGCAGAGGA+AGG 0.584591 tig0035590:+7715 Msa1455140:CDS
TGTTCTTCCTGGTACTAGTG+AGG 0.584732 tig0035590:+9421 Msa1455140:CDS
CAGGCTTCCAATGGCAAAAG+GGG 0.586520 tig0035590:-9333 None:intergenic
GAAAGAATGTGTTAAGACCA+AGG 0.588376 tig0035590:-9643 None:intergenic
GTAACGGGCGGGAGTTGTCG+CGG 0.589575 tig0035590:+7323 Msa1455140:CDS
CACCAGCAAATCCTTTCTCA+TGG 0.593275 tig0035590:-8179 None:intergenic
AGAGTGCGGGCGCATTCGAG+TGG 0.593444 tig0035590:-9263 None:intergenic
CCCATCCATGAAACTTCAGA+AGG 0.594790 tig0035590:-9235 None:intergenic
ATCTGCAGAGGGTACAGGTG+GGG 0.594998 tig0035590:+7942 Msa1455140:CDS
TTCAAGATTCGGAAAAGAAG+GGG 0.595412 tig0035590:-6671 None:intergenic
TCGGCACATCAGGCTTCCAA+TGG 0.595760 tig0035590:-9342 None:intergenic
ACTGACTCAATTGTATCCGA+AGG 0.597171 tig0035590:-7247 None:intergenic
AGATCTGCAGAGGGTACAGG+TGG 0.599302 tig0035590:+7940 Msa1455140:CDS
AAAGTAGCCTCACTAGTACC+AGG 0.600234 tig0035590:-9428 None:intergenic
CAGAGGAAGGTGATTATGGG+AGG 0.601611 tig0035590:+7728 Msa1455140:CDS
ATTGCATTTGGTGATTCGAC+TGG 0.602103 tig0035590:+7390 Msa1455140:CDS
AAAGAATGTGTTAAGACCAA+GGG 0.602876 tig0035590:-9642 None:intergenic
CAATTGGAATCAAAACAGCC+TGG 0.604227 tig0035590:-8437 None:intergenic
TCCGAAGGTAGCACACGCAT+CGG 0.605294 tig0035590:-7232 None:intergenic
TGCTGATCCTGAACAGCAGG+AGG 0.606146 tig0035590:+7531 Msa1455140:CDS
TTCTCCAATCAGATCTGCAG+AGG 0.606887 tig0035590:+7930 Msa1455140:CDS
TCTCATGGCCAAATAATGAT+CGG 0.609397 tig0035590:-8164 None:intergenic
AATTGCTGGTGATCTCATCA+AGG 0.609496 tig0035590:-9484 None:intergenic
TGGTCGAGATTCGGAGAGTG+CGG 0.613622 tig0035590:-9277 None:intergenic
GCCATCGGCTCTTCATCCAT+AGG 0.614196 tig0035590:-8015 None:intergenic
TCGTTTATCTTTCGTACTCG+GGG 0.614739 tig0035590:+7200 Msa1455140:CDS
TCCAAAATAAGACCTCTACC+AGG 0.616093 tig0035590:-7820 None:intergenic
AGGCCAATAAAGCCATTCAA+AGG 0.616797 tig0035590:-9141 None:intergenic
TATGAAGAATTCTGATGCAG+AGG 0.617375 tig0035590:+7711 Msa1455140:CDS
AAAAGTTGGTTTGTAACGGG+CGG 0.617558 tig0035590:+7311 Msa1455140:CDS
GGAACAAGTTCTCACACTGA+TGG 0.618065 tig0035590:-7425 None:intergenic
AACTCCATAATCCTTGAGCA+AGG 0.619740 tig0035590:-7353 None:intergenic
AAGGATTATGGAGTTACCGA+AGG 0.621322 tig0035590:+7361 Msa1455140:CDS
TGTGAGAACTTGTTCCGGGA+AGG 0.622079 tig0035590:+7432 Msa1455140:CDS
AGGAGTATGAAGCCATCGAA+CGG 0.625133 tig0035590:+7779 Msa1455140:CDS
AAAGCATTTAACCATCCAGA+GGG 0.626201 tig0035590:+8234 Msa1455140:CDS
CAGTGAAACTCAAAATTCAG+AGG 0.628770 tig0035590:+7266 Msa1455140:CDS
ACTTTATGCTCGACTCAACA+GGG 0.629476 tig0035590:+7968 Msa1455140:CDS
AAGATAGGAGGAGCGCGTAG+TGG 0.631735 tig0035590:-6562 None:intergenic
TAGCAGCCAAACCCTCTGGA+TGG 0.631866 tig0035590:-8245 None:intergenic
GTAATGGGTAATGACTCCCT+TGG 0.634850 tig0035590:+9626 Msa1455140:three_prime_UTR
CCCTCACCGTCTAACGACAA+AGG 0.638858 tig0035590:-8060 None:intergenic
GTATGTTAAGAAACAGATTG+CGG 0.640425 tig0035590:+7492 Msa1455140:CDS
GAATTGTGGAACAAGATAGG+AGG 0.640471 tig0035590:-6574 None:intergenic
AAGGGTACAAGAGTTGGCCA+AGG 0.641585 tig0035590:+8090 Msa1455140:CDS
AAGCACTTTGCCATAACAGT+CGG 0.642352 tig0035590:-8207 None:intergenic
GGAGAATAATGGAAGTTGTG+AGG 0.648120 tig0035590:+8293 Msa1455140:CDS
TCTCCAATCAGATCTGCAGA+GGG 0.648500 tig0035590:+7931 Msa1455140:CDS
ATTATGTCGAGAAATGCTCC+TGG 0.652932 tig0035590:+7802 Msa1455140:CDS
AAGTGCTTACACTAGTGGGA+AGG 0.656001 tig0035590:-8473 None:intergenic
GATCTGCAGAGGGTACAGGT+GGG 0.656279 tig0035590:+7941 Msa1455140:CDS
AGTTGTGAGGATATGGGACC+TGG 0.656793 tig0035590:+8306 Msa1455140:CDS
CACTTTGCCATAACAGTCGG+AGG 0.659075 tig0035590:-8204 None:intergenic
CCATCCATGAAACTTCAGAA+GGG 0.666106 tig0035590:-9234 None:intergenic
CAAAGCATTTAACCATCCAG+AGG 0.671281 tig0035590:+8233 Msa1455140:CDS
AGATTCGAAGACAAGTGCAG+TGG 0.674817 tig0035590:-7163 None:intergenic
CCTTGAAACAGGACTCAGAG+TGG 0.679484 tig0035590:-7104 None:intergenic
CATGGCCAAATAATGATCGG+CGG 0.694496 tig0035590:-8161 None:intergenic
AATATGCGGATGTTAGTACA+GGG 0.697062 tig0035590:+7650 Msa1455140:CDS
GCAGGAGGTTGTGTGTAACG+GGG 0.717392 tig0035590:+7546 Msa1455140:CDS
ATGGCTGTGAATAACCCTAG+AGG 0.736670 tig0035590:+8033 Msa1455140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAATTTGATTTTGATT+AGG + tig0035590:6875-6894 Msa1455140:five_prime_UTR 10.0%
!!! AAAGTTAAACATTATTTTAT+TGG + tig0035590:8953-8972 Msa1455140:intron 10.0%
!! TTTAACAAAATATCACAAAA+AGG - tig0035590:6860-6879 None:intergenic 15.0%
!! AATAAAAGTTGTAATATCTA+AGG + tig0035590:8689-8708 Msa1455140:intron 15.0%
!! AAAAAAAAAAAGACAATCAT+TGG - tig0035590:9590-9609 None:intergenic 15.0%
!! ATAACCTATAATTAATTAAG+AGG - tig0035590:9692-9711 None:intergenic 15.0%
!!! AACAATCTTTTTGATTGAAA+AGG - tig0035590:6837-6856 None:intergenic 20.0%
!!! AATTTGATTTTGATTAGGTT+TGG + tig0035590:6880-6899 Msa1455140:five_prime_UTR 20.0%
!! ATTAAAGCTTAACTATATCT+GGG - tig0035590:6933-6952 None:intergenic 20.0%
!! AATTAAAGCTTAACTATATC+TGG - tig0035590:6934-6953 None:intergenic 20.0%
!! CAAATTCAATGAAAAACTAA+AGG - tig0035590:7039-7058 None:intergenic 20.0%
!!! TTTTGTTAGAACAAAATATG+CGG + tig0035590:7636-7655 Msa1455140:CDS 20.0%
!!! GTTAAACATTATTTTATTGG+TGG + tig0035590:8956-8975 Msa1455140:intron 20.0%
!! TCATTAAGAATTATAATTGC+TGG - tig0035590:9501-9520 None:intergenic 20.0%
!!! TTTAATTGTTTTCACAGTAA+TGG + tig0035590:9610-9629 Msa1455140:three_prime_UTR 20.0%
!!! TTAATTGTTTTCACAGTAAT+GGG + tig0035590:9611-9630 Msa1455140:three_prime_UTR 20.0%
!!! AATTAAGAGGTGTAAATATA+AGG - tig0035590:9679-9698 None:intergenic 20.0%
!! TACACCTCTTAATTAATTAT+AGG + tig0035590:9685-9704 Msa1455140:three_prime_UTR 20.0%
! TTTACACCAATCACAAAATT+AGG + tig0035590:6760-6779 Msa1455140:five_prime_UTR 25.0%
! TTACACCAATCACAAAATTA+GGG + tig0035590:6761-6780 Msa1455140:five_prime_UTR 25.0%
!! ATAAACCCTAATTTTGTGAT+TGG - tig0035590:6769-6788 None:intergenic 25.0%
! ATTGTAACATTGGTAGAATT+AGG + tig0035590:6991-7010 Msa1455140:five_prime_UTR 25.0%
! TTGTAACATTGGTAGAATTA+GGG + tig0035590:6992-7011 Msa1455140:five_prime_UTR 25.0%
!!! AAACAAAAGTTGGTTTGTAA+CGG + tig0035590:7307-7326 Msa1455140:CDS 25.0%
! ATGATAAACACTACATATGA+TGG + tig0035590:7892-7911 Msa1455140:CDS 25.0%
! TGATAAACACTACATATGAT+GGG + tig0035590:7893-7912 Msa1455140:CDS 25.0%
! GTTATAACTTAATCAGTTGT+AGG + tig0035590:8580-8599 Msa1455140:intron 25.0%
! AACTATACTTAATGCCATAA+TGG - tig0035590:8654-8673 None:intergenic 25.0%
! AATCTGAAAAACAATCCAAA+AGG - tig0035590:8718-8737 None:intergenic 25.0%
! TAACACCAAAGTTAATGATT+TGG + tig0035590:8863-8882 Msa1455140:intron 25.0%
! TCTATCCAAATCATTAACTT+TGG - tig0035590:8871-8890 None:intergenic 25.0%
!!! TCTTTTTTCTCTTGATGTTT+AGG + tig0035590:9009-9028 Msa1455140:intron 25.0%
!!! CTTTTTTCTCTTGATGTTTA+GGG + tig0035590:9010-9029 Msa1455140:intron 25.0%
!!! TTTTTTCTCTTGATGTTTAG+GGG + tig0035590:9011-9030 Msa1455140:intron 25.0%
AATGAATTGTGGAACAAGAT+AGG - tig0035590:6580-6599 None:intergenic 30.0%
! TGAAATTTCTCTCTCGTTTT+TGG + tig0035590:6617-6636 Msa1455140:five_prime_UTR 30.0%
ATTCAAGATTCGGAAAAGAA+GGG - tig0035590:6675-6694 None:intergenic 30.0%
AATTCAAGATTCGGAAAAGA+AGG - tig0035590:6676-6695 None:intergenic 30.0%
TGTTGTTGGAATTCAAGATT+CGG - tig0035590:6685-6704 None:intergenic 30.0%
CACAAAATTAGGGTTTATAG+AGG + tig0035590:6771-6790 Msa1455140:five_prime_UTR 30.0%
!! TGGCTTTAGAATTGTAACAT+TGG + tig0035590:6981-7000 Msa1455140:five_prime_UTR 30.0%
!!! TTGGTAGAATTAGGGTTTTT+TGG + tig0035590:7000-7019 Msa1455140:five_prime_UTR 30.0%
TTTCGTTTATCTTTCGTACT+CGG + tig0035590:7198-7217 Msa1455140:CDS 30.0%
AGTGACAAACAAACAAAAGT+TGG + tig0035590:7297-7316 Msa1455140:CDS 30.0%
!! AACAAAAGTTGGTTTGTAAC+GGG + tig0035590:7308-7327 Msa1455140:CDS 30.0%
CAAATGCAATACATTTCCTT+CGG - tig0035590:7380-7399 None:intergenic 30.0%
GTATGTTAAGAAACAGATTG+CGG + tig0035590:7492-7511 Msa1455140:CDS 30.0%
AACAGGGCAAAAATATGTAT+CGG + tig0035590:7984-8003 Msa1455140:CDS 30.0%
! TTAAAAAAGGGTACAAGAGT+TGG + tig0035590:8084-8103 Msa1455140:CDS 30.0%
!!! GTTTTGATTCCAATTGATCA+TGG + tig0035590:8444-8463 Msa1455140:CDS 30.0%
GATTAAGTTATAACCAGACA+AGG - tig0035590:8574-8593 None:intergenic 30.0%
ATGAAGGTAATATCATGCTA+GGG - tig0035590:8792-8811 None:intergenic 30.0%
AACAAAGAGAATAGTAGCAT+CGG - tig0035590:8836-8855 None:intergenic 30.0%
!! ACTGCATGTATTTTGAGTAA+TGG + tig0035590:8912-8931 Msa1455140:intron 30.0%
GAGTAATGGCAATTGTAATT+AGG + tig0035590:8926-8945 Msa1455140:intron 30.0%
GGCATTATTTACCTATTTGA+AGG + tig0035590:8977-8996 Msa1455140:intron 30.0%
GAATGCAAAATCCTTCAAAT+AGG - tig0035590:8991-9010 None:intergenic 30.0%
TTGAAGATTGTACCTTTGAA+TGG + tig0035590:9129-9148 Msa1455140:CDS 30.0%
TTTATGTAGTCAATGATCTC+TGG - tig0035590:9188-9207 None:intergenic 30.0%
AATATCTTCTTCAGCATCAA+GGG - tig0035590:9213-9232 None:intergenic 30.0%
ACTCTTTGTTCAATGATTCT+CGG - tig0035590:9364-9383 None:intergenic 30.0%
ATGAAGTTGAATTCTGCTAT+AGG + tig0035590:9517-9536 Msa1455140:exon 30.0%
TTGAATTCTGCTATAGGATT+TGG + tig0035590:9523-9542 Msa1455140:three_prime_UTR 30.0%
AAAGAATGTGTTAAGACCAA+GGG - tig0035590:9645-9664 None:intergenic 30.0%
TATGCTTTGTAGAAGTGAAA+TGG + tig0035590:9715-9734 Msa1455140:three_prime_UTR 30.0%
ATGCTTTGTAGAAGTGAAAT+GGG + tig0035590:9716-9735 Msa1455140:three_prime_UTR 30.0%
GAGAAGAGAAGAATGAATTG+TGG - tig0035590:6591-6610 None:intergenic 35.0%
TTCAAGATTCGGAAAAGAAG+GGG - tig0035590:6674-6693 None:intergenic 35.0%
!! GAGTTGTTTGTTGTTGTTGT+TGG - tig0035590:6699-6718 None:intergenic 35.0%
ACAACTCTTCTTCTTCTTCT+CGG + tig0035590:6712-6731 Msa1455140:five_prime_UTR 35.0%
ACGATGAGAAATTAAGCTTC+TGG + tig0035590:6796-6815 Msa1455140:five_prime_UTR 35.0%
CGATGAGAAATTAAGCTTCT+GGG + tig0035590:6797-6816 Msa1455140:five_prime_UTR 35.0%
! TTTGATTAGGTTTGGTCTTC+TGG + tig0035590:6888-6907 Msa1455140:five_prime_UTR 35.0%
! TTGATTAGGTTTGGTCTTCT+GGG + tig0035590:6889-6908 Msa1455140:five_prime_UTR 35.0%
! CAGTGATTTGTACAGATATG+TGG + tig0035590:6961-6980 Msa1455140:five_prime_UTR 35.0%
AGTTGAAAAATGTCTTCTGC+TGG + tig0035590:7076-7095 Msa1455140:exon 35.0%
AACAATTTCTCCCTTGAAAC+AGG - tig0035590:7118-7137 None:intergenic 35.0%
AAATTGTTGTCTCCAACCAA+TGG + tig0035590:7130-7149 Msa1455140:CDS 35.0%
GGATTACATAATCCATTGGT+TGG - tig0035590:7145-7164 None:intergenic 35.0%
!! CAGTGGATTACATAATCCAT+TGG - tig0035590:7149-7168 None:intergenic 35.0%
TTCGTTTATCTTTCGTACTC+GGG + tig0035590:7199-7218 Msa1455140:CDS 35.0%
CAGTGAAACTCAAAATTCAG+AGG + tig0035590:7266-7285 Msa1455140:CDS 35.0%
CTCAAAATTCAGAGGAATGA+AGG + tig0035590:7274-7293 Msa1455140:CDS 35.0%
AATTCCTTGCTCAAGGATTA+TGG + tig0035590:7349-7368 Msa1455140:CDS 35.0%
CGAAGGAAATGTATTGCATT+TGG + tig0035590:7378-7397 Msa1455140:CDS 35.0%
!! AGTATACCTTTCAGGTTGAA+AGG + tig0035590:7455-7474 Msa1455140:CDS 35.0%
! TTGAAAGGTGTAAGGATGTT+TGG + tig0035590:7470-7489 Msa1455140:CDS 35.0%
TAAGAAACAGATTGCGGAAA+AGG + tig0035590:7498-7517 Msa1455140:CDS 35.0%
AAATATGCGGATGTTAGTAC+AGG + tig0035590:7649-7668 Msa1455140:CDS 35.0%
AATATGCGGATGTTAGTACA+GGG + tig0035590:7650-7669 Msa1455140:CDS 35.0%
TATGAAGAATTCTGATGCAG+AGG + tig0035590:7711-7730 Msa1455140:CDS 35.0%
!! ACTTTAGGGTTAACAACAAC+CGG - tig0035590:7847-7866 None:intergenic 35.0%
CTGAAGCTAGTTCAACTTTA+GGG - tig0035590:7861-7880 None:intergenic 35.0%
! TCTGAAGCTAGTTCAACTTT+AGG - tig0035590:7862-7881 None:intergenic 35.0%
! TAAAGTTGAACTAGCTTCAG+AGG + tig0035590:7861-7880 Msa1455140:CDS 35.0%
!! GGAAGTTGCTGCTTATATTT+TGG + tig0035590:8122-8141 Msa1455140:CDS 35.0%
! ATTTTGGATCATCCAATGAG+TGG + tig0035590:8138-8157 Msa1455140:CDS 35.0%
TCTCATGGCCAAATAATGAT+CGG - tig0035590:8167-8186 None:intergenic 35.0%
TCATTATTTGGCCATGAGAA+AGG + tig0035590:8168-8187 Msa1455140:CDS 35.0%
! AAAGCATTTAACCATCCAGA+GGG + tig0035590:8234-8253 Msa1455140:CDS 35.0%
CAAATGTTCGTGGAGAATAA+TGG + tig0035590:8282-8301 Msa1455140:CDS 35.0%
TAATGGAAGTTGTGAGGATA+TGG + tig0035590:8299-8318 Msa1455140:CDS 35.0%
AATGGAAGTTGTGAGGATAT+GGG + tig0035590:8300-8319 Msa1455140:CDS 35.0%
CTTGGCAAAGAGAAGAAAAA+TGG + tig0035590:8414-8433 Msa1455140:CDS 35.0%
! AATGAAGTGCTTACACTAGT+GGG - tig0035590:8480-8499 None:intergenic 35.0%
! AAATGAAGTGCTTACACTAG+TGG - tig0035590:8481-8500 None:intergenic 35.0%
! GCTTTATTGTTCTCTTGATG+TGG + tig0035590:8530-8549 Msa1455140:intron 35.0%
!!! AACTTTTGTTTTGCCTTGTC+TGG + tig0035590:8558-8577 Msa1455140:intron 35.0%
!! TAATATCTAAGGCCTCCTTT+TGG + tig0035590:8700-8719 Msa1455140:intron 35.0%
CTGAAAAACAATCCAAAAGG+AGG - tig0035590:8715-8734 None:intergenic 35.0%
TATGAGTGAGTAATGTAACC+TGG + tig0035590:8745-8764 Msa1455140:intron 35.0%
!! AATGTAACCTGGAGTGTTTT+TGG + tig0035590:8756-8775 Msa1455140:intron 35.0%
ATAACTACCAAAAACACTCC+AGG - tig0035590:8766-8785 None:intergenic 35.0%
CATGAAGGTAATATCATGCT+AGG - tig0035590:8793-8812 None:intergenic 35.0%
CAAAAAAAACCTTGAGTGAG+TGG - tig0035590:9096-9115 None:intergenic 35.0%
!! GTACCTTTGAATGGCTTTAT+TGG + tig0035590:9138-9157 Msa1455140:CDS 35.0%
CAATATCTTCTTCAGCATCA+AGG - tig0035590:9214-9233 None:intergenic 35.0%
! ATGCTTCTGAAAAAAGGAGT+GGG + tig0035590:9299-9318 Msa1455140:CDS 35.0%
AACAAAGAGTCTGTGATTGA+AGG + tig0035590:9374-9393 Msa1455140:CDS 35.0%
!!! TACTAGTGAGGCTACTTTTA+TGG + tig0035590:9433-9452 Msa1455140:CDS 35.0%
GAAAGAATGTGTTAAGACCA+AGG - tig0035590:9646-9665 None:intergenic 35.0%
TGAAATGGGACATCACTTAT+TGG + tig0035590:9730-9749 Msa1455140:three_prime_UTR 35.0%
GAAATGGGACATCACTTATT+GGG + tig0035590:9731-9750 Msa1455140:three_prime_UTR 35.0%
CATCACTTATTGGGAAATTG+TGG + tig0035590:9740-9759 Msa1455140:three_prime_UTR 35.0%
GAATTGTGGAACAAGATAGG+AGG - tig0035590:6577-6596 None:intergenic 40.0%
!! AGGGGAAAGGGTTTGTTAAT+TGG - tig0035590:6656-6675 None:intergenic 40.0%
ATTCGGAAAAGAAGGGGAAA+GGG - tig0035590:6668-6687 None:intergenic 40.0%
TCGTTTATCTTTCGTACTCG+GGG + tig0035590:7200-7219 Msa1455140:CDS 40.0%
! ACTGACTCAATTGTATCCGA+AGG - tig0035590:7250-7269 None:intergenic 40.0%
!! AAAAGTTGGTTTGTAACGGG+CGG + tig0035590:7311-7330 Msa1455140:CDS 40.0%
AACTCCATAATCCTTGAGCA+AGG - tig0035590:7356-7375 None:intergenic 40.0%
AAGGATTATGGAGTTACCGA+AGG + tig0035590:7361-7380 Msa1455140:CDS 40.0%
! ATTGCATTTGGTGATTCGAC+TGG + tig0035590:7390-7409 Msa1455140:CDS 40.0%
! ATCAGTGTGAGAACTTGTTC+CGG + tig0035590:7427-7446 Msa1455140:CDS 40.0%
CTTACACCTTTCAACCTGAA+AGG - tig0035590:7464-7483 None:intergenic 40.0%
!! CTTTCAGGTTGAAAGGTGTA+AGG + tig0035590:7462-7481 Msa1455140:CDS 40.0%
AAGAATTCTGATGCAGAGGA+AGG + tig0035590:7715-7734 Msa1455140:CDS 40.0%
ATGCAGAGGAAGGTGATTAT+GGG + tig0035590:7725-7744 Msa1455140:CDS 40.0%
TAGCAAAGAAGATGCGAGAA+AGG + tig0035590:7759-7778 Msa1455140:CDS 40.0%
ATTATGTCGAGAAATGCTCC+TGG + tig0035590:7802-7821 Msa1455140:CDS 40.0%
!!! TCCTGGTAGAGGTCTTATTT+TGG + tig0035590:7819-7838 Msa1455140:CDS 40.0%
TCCAAAATAAGACCTCTACC+AGG - tig0035590:7823-7842 None:intergenic 40.0%
!!! TAGAGGTCTTATTTTGGAGC+CGG + tig0035590:7825-7844 Msa1455140:CDS 40.0%
! TTGAACTAGCTTCAGAGGTT+TGG + tig0035590:7866-7885 Msa1455140:CDS 40.0%
! TGAACTAGCTTCAGAGGTTT+GGG + tig0035590:7867-7886 Msa1455140:CDS 40.0%
!! ACATATGATGGGCTAGATAG+TGG + tig0035590:7904-7923 Msa1455140:CDS 40.0%
TACTTTATGCTCGACTCAAC+AGG + tig0035590:7967-7986 Msa1455140:CDS 40.0%
ACTTTATGCTCGACTCAACA+GGG + tig0035590:7968-7987 Msa1455140:CDS 40.0%
!!! TGTATCGGTTTTCAAGCCTA+TGG + tig0035590:7999-8018 Msa1455140:CDS 40.0%
ACGACAAAGGTAAACCTCTA+GGG - tig0035590:8050-8069 None:intergenic 40.0%
AACGACAAAGGTAAACCTCT+AGG - tig0035590:8051-8070 None:intergenic 40.0%
GGTTTACCTTTGTCGTTAGA+CGG + tig0035590:8054-8073 Msa1455140:CDS 40.0%
AAGCACTTTGCCATAACAGT+CGG - tig0035590:8210-8229 None:intergenic 40.0%
! CAAAGCATTTAACCATCCAG+AGG + tig0035590:8233-8252 Msa1455140:CDS 40.0%
ATTTAACCATCCAGAGGGTT+TGG + tig0035590:8239-8258 Msa1455140:CDS 40.0%
ATTCTCCACGAACATTTGCA+AGG - tig0035590:8280-8299 None:intergenic 40.0%
! GGAGAATAATGGAAGTTGTG+AGG + tig0035590:8293-8312 Msa1455140:CDS 40.0%
! ATTTTATGCACCTCCTTCAC+CGG - tig0035590:8339-8358 None:intergenic 40.0%
GGTGCATAAAATTACTGTGC+TGG + tig0035590:8347-8366 Msa1455140:CDS 40.0%
TGAGACTTGCAAATGCAGAT+AGG + tig0035590:8373-8392 Msa1455140:CDS 40.0%
! CATGCTGGGAATATTTTGCT+TGG + tig0035590:8396-8415 Msa1455140:CDS 40.0%
CAAAGAGAAGAAAAATGGCC+AGG + tig0035590:8419-8438 Msa1455140:CDS 40.0%
CAATTGGAATCAAAACAGCC+TGG - tig0035590:8440-8459 None:intergenic 40.0%
AGGCAGTATCCATGATCAAT+TGG - tig0035590:8456-8475 None:intergenic 40.0%
GCAAGTCGTTGTAATCATGA+AGG - tig0035590:8808-8827 None:intergenic 40.0%
! GAGAATAGTAGCATCGGAAA+AGG - tig0035590:8830-8849 None:intergenic 40.0%
GTCTTCAAGATTGACAGCTT+TGG - tig0035590:8894-8913 None:intergenic 40.0%
TTTCTCTTGATGTTTAGGGG+AGG + tig0035590:9014-9033 Msa1455140:intron 40.0%
AACTCTAAACCACTCACTCA+AGG + tig0035590:9084-9103 Msa1455140:intron 40.0%
AGGCCAATAAAGCCATTCAA+AGG - tig0035590:9144-9163 None:intergenic 40.0%
! TCAATGATCTCTGGAGAGTA+TGG - tig0035590:9179-9198 None:intergenic 40.0%
!! ATTGCCCTTCTGAAGTTTCA+TGG + tig0035590:9230-9249 Msa1455140:CDS 40.0%
CCATCCATGAAACTTCAGAA+GGG - tig0035590:9237-9256 None:intergenic 40.0%
!! CCTTCTGAAGTTTCATGGAT+GGG + tig0035590:9235-9254 Msa1455140:CDS 40.0%
! TCGACCATGCTTCTGAAAAA+AGG + tig0035590:9293-9312 Msa1455140:CDS 40.0%
!!! CACTCCTTTTTTCAGAAGCA+TGG - tig0035590:9300-9319 None:intergenic 40.0%
! CATGCTTCTGAAAAAAGGAG+TGG + tig0035590:9298-9317 Msa1455140:CDS 40.0%
! TGCTTCTGAAAAAAGGAGTG+GGG + tig0035590:9300-9319 Msa1455140:CDS 40.0%
TGAAAAAAGGAGTGGGGAAA+GGG + tig0035590:9306-9325 Msa1455140:CDS 40.0%
!! GGATGCTGTTTCTGAGATTA+TGG + tig0035590:9454-9473 Msa1455140:CDS 40.0%
AATTGCTGGTGATCTCATCA+AGG - tig0035590:9487-9506 None:intergenic 40.0%
GATTCGGAAAAGAAGGGGAA+AGG - tig0035590:6669-6688 None:intergenic 45.0%
! TTAGGTTTGGTCTTCTGGGT+TGG + tig0035590:6893-6912 Msa1455140:five_prime_UTR 45.0%
CACTCTGAGTCCTGTTTCAA+GGG + tig0035590:7105-7124 Msa1455140:CDS 45.0%
AGATTCGAAGACAAGTGCAG+TGG - tig0035590:7166-7185 None:intergenic 45.0%
!! AAAGTTGGTTTGTAACGGGC+GGG + tig0035590:7312-7331 Msa1455140:CDS 45.0%
GGAACAAGTTCTCACACTGA+TGG - tig0035590:7428-7447 None:intergenic 45.0%
! TCAGTGTGAGAACTTGTTCC+GGG + tig0035590:7428-7447 Msa1455140:CDS 45.0%
! CTGAAAGGTATACTCCTTCC+CGG - tig0035590:7449-7468 None:intergenic 45.0%
GATGCAGAGGAAGGTGATTA+TGG + tig0035590:7724-7743 Msa1455140:CDS 45.0%
! AGGAGTATGAAGCCATCGAA+CGG + tig0035590:7779-7798 Msa1455140:CDS 45.0%
TCTCGACATAATCCGTTCGA+TGG - tig0035590:7794-7813 None:intergenic 45.0%
TTCTCCAATCAGATCTGCAG+AGG + tig0035590:7930-7949 Msa1455140:CDS 45.0%
TCTCCAATCAGATCTGCAGA+GGG + tig0035590:7931-7950 Msa1455140:CDS 45.0%
CTAGGGTTATTCACAGCCAT+CGG - tig0035590:8033-8052 None:intergenic 45.0%
ATGGCTGTGAATAACCCTAG+AGG + tig0035590:8033-8052 Msa1455140:CDS 45.0%
AGACGGTGAGGGCTTAAAAA+AGG + tig0035590:8071-8090 Msa1455140:CDS 45.0%
GACGGTGAGGGCTTAAAAAA+GGG + tig0035590:8072-8091 Msa1455140:CDS 45.0%
CATGGCCAAATAATGATCGG+CGG - tig0035590:8164-8183 None:intergenic 45.0%
CACCAGCAAATCCTTTCTCA+TGG - tig0035590:8182-8201 None:intergenic 45.0%
TGGTTCCTTGCAAATGTTCG+TGG + tig0035590:8272-8291 Msa1455140:CDS 45.0%
CAAATGCAGATAGGCATGCT+GGG + tig0035590:8382-8401 Msa1455140:CDS 45.0%
AAGTGCTTACACTAGTGGGA+AGG - tig0035590:8476-8495 None:intergenic 45.0%
! AATGCTGCTCTGAGCCATTA+TGG + tig0035590:8637-8656 Msa1455140:intron 45.0%
!! CCCTTCTGAAGTTTCATGGA+TGG + tig0035590:9234-9253 Msa1455140:CDS 45.0%
CCCATCCATGAAACTTCAGA+AGG - tig0035590:9238-9257 None:intergenic 45.0%
! TCAGAAGCATGGTCGAGATT+CGG - tig0035590:9289-9308 None:intergenic 45.0%
CTGAAAAAAGGAGTGGGGAA+AGG + tig0035590:9305-9324 Msa1455140:CDS 45.0%
TCAGGCTTCCAATGGCAAAA+GGG - tig0035590:9337-9356 None:intergenic 45.0%
ATCAGGCTTCCAATGGCAAA+AGG - tig0035590:9338-9357 None:intergenic 45.0%
TCAATGATTCTCGGCACATC+AGG - tig0035590:9355-9374 None:intergenic 45.0%
TGTTCTTCCTGGTACTAGTG+AGG + tig0035590:9421-9440 Msa1455140:CDS 45.0%
AAAGTAGCCTCACTAGTACC+AGG - tig0035590:9431-9450 None:intergenic 45.0%
!! GTAATGGGTAATGACTCCCT+TGG + tig0035590:9626-9645 Msa1455140:three_prime_UTR 45.0%
CCTTGAAACAGGACTCAGAG+TGG - tig0035590:7107-7126 None:intergenic 50.0%
CCACTCTGAGTCCTGTTTCA+AGG + tig0035590:7104-7123 Msa1455140:CDS 50.0%
! TGTGAGAACTTGTTCCGGGA+AGG + tig0035590:7432-7451 Msa1455140:CDS 50.0%
! CGGGAAGGAGTATACCTTTC+AGG + tig0035590:7447-7466 Msa1455140:CDS 50.0%
! GTTTGCTGATCCTGAACAGC+AGG + tig0035590:7528-7547 Msa1455140:CDS 50.0%
CAGCAGGAGGTTGTGTGTAA+CGG + tig0035590:7544-7563 Msa1455140:CDS 50.0%
AGCAGGAGGTTGTGTGTAAC+GGG + tig0035590:7545-7564 Msa1455140:CDS 50.0%
CAGAGGAAGGTGATTATGGG+AGG + tig0035590:7728-7747 Msa1455140:CDS 50.0%
TCGAGAAATGCTCCTGGTAG+AGG + tig0035590:7808-7827 Msa1455140:CDS 50.0%
GTACCCTCTGCAGATCTGAT+TGG - tig0035590:7937-7956 None:intergenic 50.0%
! ATCAGATCTGCAGAGGGTAC+AGG + tig0035590:7937-7956 Msa1455140:CDS 50.0%
ACCTTTGTCGTTAGACGGTG+AGG + tig0035590:8059-8078 Msa1455140:CDS 50.0%
CCTTTGTCGTTAGACGGTGA+GGG + tig0035590:8060-8079 Msa1455140:CDS 50.0%
! AAGGGTACAAGAGTTGGCCA+AGG + tig0035590:8090-8109 Msa1455140:CDS 50.0%
AGTTGGCCAAGGAGCTTTCA+GGG + tig0035590:8101-8120 Msa1455140:CDS 50.0%
CAACTTCCCTGAAAGCTCCT+TGG - tig0035590:8110-8129 None:intergenic 50.0%
AGTGGCCGCCGATCATTATT+TGG + tig0035590:8156-8175 Msa1455140:CDS 50.0%
GGCCATGAGAAAGGATTTGC+TGG + tig0035590:8177-8196 Msa1455140:CDS 50.0%
TGGTGTTCCTCCGACTGTTA+TGG + tig0035590:8197-8216 Msa1455140:CDS 50.0%
CACTTTGCCATAACAGTCGG+AGG - tig0035590:8207-8226 None:intergenic 50.0%
AACTTAGCAGCCAAACCCTC+TGG - tig0035590:8252-8271 None:intergenic 50.0%
GAGGGTTTGGCTGCTAAGTT+TGG + tig0035590:8252-8271 Msa1455140:CDS 50.0%
AGTTGTGAGGATATGGGACC+TGG + tig0035590:8306-8325 Msa1455140:CDS 50.0%
! TATGGGACCTGGTGCTTTTC+CGG + tig0035590:8317-8336 Msa1455140:CDS 50.0%
GCAAATGCAGATAGGCATGC+TGG + tig0035590:8381-8400 Msa1455140:CDS 50.0%
CTCTTGATGTTTAGGGGAGG+AGG + tig0035590:9017-9036 Msa1455140:intron 50.0%
! TGATCTCTGGAGAGTATGGC+TGG - tig0035590:9175-9194 None:intergenic 50.0%
CAGGCTTCCAATGGCAAAAG+GGG - tig0035590:9336-9355 None:intergenic 50.0%
GCACTCGATTCTGTTCTTCC+TGG + tig0035590:9410-9429 Msa1455140:CDS 50.0%
TGGTGATCTCATCAAGGTGC+TGG - tig0035590:9481-9500 None:intergenic 50.0%
! AAGATAGGAGGAGCGCGTAG+TGG - tig0035590:6565-6584 None:intergenic 55.0%
TCCGATGCGTGTGCTACCTT+CGG + tig0035590:7231-7250 Msa1455140:CDS 55.0%
TCCGAAGGTAGCACACGCAT+CGG - tig0035590:7235-7254 None:intergenic 55.0%
GCGGAGCAATTCCTTGCTCA+AGG + tig0035590:7342-7361 Msa1455140:CDS 55.0%
TGCTGATCCTGAACAGCAGG+AGG + tig0035590:7531-7550 Msa1455140:CDS 55.0%
CACACAACCTCCTGCTGTTC+AGG - tig0035590:7541-7560 None:intergenic 55.0%
GCAGGAGGTTGTGTGTAACG+GGG + tig0035590:7546-7565 Msa1455140:CDS 55.0%
! AGATCTGCAGAGGGTACAGG+TGG + tig0035590:7940-7959 Msa1455140:CDS 55.0%
! GATCTGCAGAGGGTACAGGT+GGG + tig0035590:7941-7960 Msa1455140:CDS 55.0%
! ATCTGCAGAGGGTACAGGTG+GGG + tig0035590:7942-7961 Msa1455140:CDS 55.0%
GCCTATGGATGAAGAGCCGA+TGG + tig0035590:8014-8033 Msa1455140:CDS 55.0%
!! GCCATCGGCTCTTCATCCAT+AGG - tig0035590:8018-8037 None:intergenic 55.0%
CCCTCACCGTCTAACGACAA+AGG - tig0035590:8063-8082 None:intergenic 55.0%
GAGTTGGCCAAGGAGCTTTC+AGG + tig0035590:8100-8119 Msa1455140:CDS 55.0%
AATGATCGGCGGCCACTCAT+TGG - tig0035590:8153-8172 None:intergenic 55.0%
TAGCAGCCAAACCCTCTGGA+TGG - tig0035590:8248-8267 None:intergenic 55.0%
! ACCTGGTGCTTTTCCGGTGA+AGG + tig0035590:8323-8342 Msa1455140:CDS 55.0%
!! TCCTTCACCGGAAAAGCACC+AGG - tig0035590:8327-8346 None:intergenic 55.0%
! TGGTGCTTTTCCGGTGAAGG+AGG + tig0035590:8326-8345 Msa1455140:CDS 55.0%
TGGTCGAGATTCGGAGAGTG+CGG - tig0035590:9280-9299 None:intergenic 55.0%
! GGGATGACCCCTTTTGCCAT+TGG + tig0035590:9326-9345 Msa1455140:CDS 55.0%
TCGGCACATCAGGCTTCCAA+TGG - tig0035590:9345-9364 None:intergenic 55.0%
GAGTATGGCTGGCGAGCTTG+AGG - tig0035590:9164-9183 None:intergenic 60.0%
! GGTCGAGATTCGGAGAGTGC+GGG - tig0035590:9279-9298 None:intergenic 60.0%
!! GTAACGGGCGGGAGTTGTCG+CGG + tig0035590:7323-7342 Msa1455140:CDS 65.0%
AGAGTGCGGGCGCATTCGAG+TGG - tig0035590:9266-9285 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0035590 gene 6511 9782 6511 ID=Msa1455140;Name=Msa1455140
tig0035590 mRNA 6511 9782 6511 ID=Msa1455140-mRNA-1;Parent=Msa1455140;Name=Msa1455140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=574|1|1|1|1|1|2|265|596
tig0035590 exon 6511 8485 6511 ID=Msa1455140-mRNA-1:exon:20140;Parent=Msa1455140-mRNA-1
tig0035590 exon 9128 9782 9128 ID=Msa1455140-mRNA-1:exon:20141;Parent=Msa1455140-mRNA-1
tig0035590 five_prime_UTR 6511 7084 6511 ID=Msa1455140-mRNA-1:five_prime_utr;Parent=Msa1455140-mRNA-1
tig0035590 CDS 7085 8485 7085 ID=Msa1455140-mRNA-1:cds;Parent=Msa1455140-mRNA-1
tig0035590 CDS 9128 9517 9128 ID=Msa1455140-mRNA-1:cds;Parent=Msa1455140-mRNA-1
tig0035590 three_prime_UTR 9518 9782 9518 ID=Msa1455140-mRNA-1:three_prime_utr;Parent=Msa1455140-mRNA-1
Gene Sequence

>Msa1455140

ATGTCTTCTGCTGGTGTAACCACTCTGAGTCCTGTTTCAAGGGAGAAATTGTTGTCTCCAACCAATGGATTATGTAATCCACTGCACTTGTCTTCGAATCTTCATGATTTTATTTTCGTTTATCTTTCGTACTCGGGGTCTTTGTCTCCGATGCGTGTGCTACCTTCGGATACAATTGAGTCAGTGAAACTCAAAATTCAGAGGAATGAAGGAGTGACAAACAAACAAAAGTTGGTTTGTAACGGGCGGGAGTTGTCGCGGAGCAATTCCTTGCTCAAGGATTATGGAGTTACCGAAGGAAATGTATTGCATTTGGTGATTCGACTGGCAGATCTACAGACCATCAGTGTGAGAACTTGTTCCGGGAAGGAGTATACCTTTCAGGTTGAAAGGTGTAAGGATGTTTGGTATGTTAAGAAACAGATTGCGGAAAAGGAAAATGAGTTTGCTGATCCTGAACAGCAGGAGGTTGTGTGTAACGGGGAGCTGCTTGATGATCAGAAGCTTATTGATGATATCTGTAGCAAATATAATGATGCAGTGATACATCTTTTTGTTAGAACAAAATATGCGGATGTTAGTACAGGGCTTGATGAGTTGTCTATTGAAGCAAAAGAATTGAATGATATGAAGAATTCTGATGCAGAGGAAGGTGATTATGGGAGGAAATATGATAGCAAAGAAGATGCGAGAAAGGAGTATGAAGCCATCGAACGGATTATGTCGAGAAATGCTCCTGGTAGAGGTCTTATTTTGGAGCCGGTTGTTGTTAACCCTAAAGTTGAACTAGCTTCAGAGGTTTGGGATATGATAAACACTACATATGATGGGCTAGATAGTGGTAATTCTCCAATCAGATCTGCAGAGGGTACAGGTGGGGCTTACTTTATGCTCGACTCAACAGGGCAAAAATATGTATCGGTTTTCAAGCCTATGGATGAAGAGCCGATGGCTGTGAATAACCCTAGAGGTTTACCTTTGTCGTTAGACGGTGAGGGCTTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGATCATCCAATGAGTGGCCGCCGATCATTATTTGGCCATGAGAAAGGATTTGCTGGTGTTCCTCCGACTGTTATGGCAAAGTGCTTGCACAAAGCATTTAACCATCCAGAGGGTTTGGCTGCTAAGTTTGGTTCCTTGCAAATGTTCGTGGAGAATAATGGAAGTTGTGAGGATATGGGACCTGGTGCTTTTCCGGTGAAGGAGGTGCATAAAATTACTGTGCTGGACATGAGACTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTTGGCAAAGAGAAGAAAAATGGCCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCCTTCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCTCCAGAGATCATTGACTACATAAAGTCCCTTGATGCTGAAGAAGATATTGCCCTTCTGAAGTTTCATGGATGGGATCTGCCACTCGAATGCGCCCGCACTCTCCGAATCTCGACCATGCTTCTGAAAAAAGGAGTGGGGAAAGGGATGACCCCTTTTGCCATTGGAAGCCTGATGTGCCGAGAATCATTGAACAAAGAGTCTGTGATTGAAGGAATTTTTAAAGCAGCACTCGATTCTGTTCTTCCTGGTACTAGTGAGGCTACTTTTATGGATGCTGTTTCTGAGATTATGGACCAGCACCTTGATGAGATCACCAGCAATTATAATTCTTAA
Protein sequence

>Msa1455140

MSSAGVTTLSPVSREKLLSPTNGLCNPLHLSSNLHDFIFVYLSYSGSLSPMRVLPSDTIESVKLKIQRNEGVTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLADLQTISVRTCSGKEYTFQVERCKDVWYVKKQIAEKENEFADPEQQEVVCNGELLDDQKLIDDICSKYNDAVIHLFVRTKYADVSTGLDELSIEAKELNDMKNSDAEEGDYGRKYDSKEDARKEYEAIERIMSRNAPGRGLILEPVVVNPKVELASEVWDMINTTYDGLDSGNSPIRSAEGTGGAYFMLDSTGQKYVSVFKPMDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGHEKGFAGVPPTVMAKCLHKAFNHPEGLAAKFGSLQMFVENNGSCEDMGPGAFPVKEVHKITVLDMRLANADRHAGNILLGKEKKNGQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIKSLDAEEDIALLKFHGWDLPLECARTLRISTMLLKKGVGKGMTPFAIGSLMCRESLNKESVIEGIFKAALDSVLPGTSEATFMDAVSEIMDQHLDEITSNYNS*