Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421030 | sp|Q9ZPY9|P4KG4_ARATH | 58.319 | 595 | 207 | 9 | 1 | 588 | 1 | 561 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421030 | G8A2Y5 | 97.315 | 596 | 16 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1421030 | Msa1455140 | 0.950688 | 9.803201e-109 | -8.615850e-47 |
| Msa0706000 | Msa1421030 | 0.806864 | 6.688565e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421030 | MtrunA17_Chr8g0346901 | 97.315 | 596 | 16 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1206 |
| Msa1421030 | MtrunA17_Chr7g0275661 | 70.352 | 597 | 163 | 5 | 1 | 590 | 1 | 590 | 0.0 | 834 |
| Msa1421030 | MtrunA17_Chr8g0388301 | 58.070 | 570 | 223 | 8 | 36 | 591 | 25 | 592 | 0.0 | 658 |
| Msa1421030 | MtrunA17_Chr3g0126781 | 58.070 | 570 | 215 | 6 | 30 | 588 | 19 | 575 | 0.0 | 652 |
| Msa1421030 | MtrunA17_Chr5g0396531 | 55.075 | 601 | 240 | 10 | 1 | 591 | 1 | 581 | 0.0 | 647 |
| Msa1421030 | MtrunA17_Chr8g0366091 | 40.411 | 292 | 144 | 7 | 270 | 547 | 150 | 425 | 2.24e-62 | 217 |
| Msa1421030 | MtrunA17_Chr7g0255481 | 38.816 | 304 | 158 | 7 | 258 | 547 | 76 | 365 | 8.11e-59 | 202 |
| Msa1421030 | MtrunA17_Chr5g0420771 | 39.731 | 297 | 141 | 8 | 269 | 547 | 155 | 431 | 2.96e-58 | 206 |
| Msa1421030 | MtrunA17_Chr7g0220391 | 39.236 | 288 | 142 | 7 | 277 | 547 | 155 | 426 | 1.73e-55 | 198 |
| Msa1421030 | MtrunA17_Chr7g0274921 | 32.544 | 169 | 102 | 6 | 26 | 189 | 67 | 228 | 7.41e-17 | 80.1 |
| Msa1421030 | MtrunA17_Chr7g0274921 | 34.615 | 156 | 90 | 6 | 38 | 189 | 5 | 152 | 2.38e-16 | 78.6 |
| Msa1421030 | MtrunA17_Chr1g0181441 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 7.47e-17 | 80.1 |
| Msa1421030 | MtrunA17_Chr1g0181441 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.59e-16 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0041751 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.93e-16 | 79.0 |
| Msa1421030 | MtrunA17_Chr4g0041751 | 34.266 | 143 | 89 | 4 | 26 | 166 | 65 | 204 | 2.10e-11 | 64.3 |
| Msa1421030 | MtrunA17_Chr6g0475961 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 3.77e-16 | 77.4 |
| Msa1421030 | MtrunA17_Chr6g0475961 | 35.537 | 121 | 75 | 3 | 28 | 146 | 70 | 189 | 3.06e-12 | 65.9 |
| Msa1421030 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 73 | 234 | 5.76e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 149 | 310 | 5.76e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0377821 | 32.544 | 169 | 102 | 6 | 26 | 189 | 225 | 386 | 5.76e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0377821 | 34.615 | 156 | 90 | 6 | 38 | 189 | 11 | 158 | 1.88e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 9.04e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 9.04e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 9.04e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046801 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 9.04e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046801 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 2.72e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 69 | 230 | 9.08e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 145 | 306 | 9.08e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 221 | 382 | 9.08e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041641 | 32.544 | 169 | 102 | 6 | 26 | 189 | 297 | 458 | 9.08e-16 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041641 | 34.615 | 156 | 90 | 6 | 38 | 189 | 7 | 154 | 2.64e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 9.20e-16 | 80.5 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.12e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.12e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 1.12e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 3.32e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0048591 | 31.953 | 169 | 103 | 6 | 26 | 189 | 296 | 457 | 1.05e-14 | 77.0 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.30e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.30e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.30e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.30e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 32.544 | 169 | 102 | 6 | 26 | 189 | 369 | 530 | 1.30e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0041701 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.86e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.35e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.35e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 220 | 381 | 1.35e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 296 | 457 | 1.35e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 32.544 | 169 | 102 | 6 | 26 | 189 | 372 | 533 | 1.35e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr8g0342711 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 4.03e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 68 | 229 | 1.58e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 144 | 305 | 1.58e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 356 | 517 | 1.58e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046831 | 32.544 | 169 | 102 | 6 | 26 | 189 | 432 | 593 | 1.58e-15 | 80.1 |
| Msa1421030 | MtrunA17_Chr4g0046831 | 34.615 | 156 | 90 | 6 | 38 | 189 | 6 | 153 | 4.58e-15 | 78.6 |
| Msa1421030 | MtrunA17_Chr4g0037241 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 1.54e-14 | 71.2 |
| Msa1421030 | MtrunA17_Chr5g0444101 | 34.437 | 151 | 87 | 6 | 38 | 184 | 3 | 145 | 1.54e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421030 | AT2G46500.1 | 58.319 | 595 | 207 | 9 | 1 | 588 | 1 | 561 | 0.0 | 682 |
| Msa1421030 | AT2G46500.2 | 58.319 | 595 | 207 | 9 | 1 | 588 | 1 | 561 | 0.0 | 682 |
| Msa1421030 | AT5G24240.1 | 55.058 | 603 | 232 | 12 | 1 | 593 | 1 | 574 | 0.0 | 628 |
| Msa1421030 | AT5G24240.2 | 55.058 | 603 | 232 | 12 | 1 | 593 | 1 | 574 | 0.0 | 628 |
| Msa1421030 | AT2G46500.3 | 53.991 | 426 | 156 | 8 | 1 | 419 | 1 | 393 | 1.44e-144 | 425 |
| Msa1421030 | AT2G03890.1 | 39.871 | 311 | 154 | 8 | 254 | 547 | 139 | 433 | 3.38e-61 | 214 |
| Msa1421030 | AT1G13640.1 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 8.98e-61 | 213 |
| Msa1421030 | AT1G13640.2 | 40.741 | 297 | 139 | 7 | 272 | 547 | 149 | 429 | 8.98e-61 | 213 |
| Msa1421030 | AT1G26270.1 | 38.333 | 300 | 152 | 7 | 265 | 547 | 146 | 429 | 8.27e-57 | 202 |
| Msa1421030 | AT2G40850.1 | 38.636 | 308 | 161 | 6 | 280 | 572 | 120 | 414 | 1.68e-55 | 197 |
| Msa1421030 | AT3G56600.2 | 39.249 | 293 | 148 | 7 | 280 | 556 | 100 | 378 | 2.36e-54 | 193 |
| Msa1421030 | AT3G56600.1 | 39.249 | 293 | 148 | 7 | 280 | 556 | 103 | 381 | 2.45e-54 | 193 |
| Msa1421030 | AT3G56600.3 | 39.249 | 293 | 148 | 7 | 280 | 556 | 103 | 381 | 2.45e-54 | 193 |
| Msa1421030 | AT2G03890.2 | 42.174 | 230 | 102 | 6 | 334 | 547 | 99 | 313 | 5.24e-48 | 176 |
| Msa1421030 | AT1G27570.2 | 29.658 | 263 | 162 | 7 | 344 | 595 | 387 | 637 | 3.02e-25 | 110 |
| Msa1421030 | AT1G27570.1 | 32.227 | 211 | 125 | 5 | 344 | 543 | 396 | 599 | 3.16e-25 | 110 |
| Msa1421030 | AT4G02890.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.19e-16 | 80.1 |
| Msa1421030 | AT4G02890.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.82e-16 | 78.6 |
| Msa1421030 | AT4G02890.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.19e-16 | 80.1 |
| Msa1421030 | AT4G02890.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.82e-16 | 78.6 |
| Msa1421030 | AT4G05050.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.19e-16 | 80.1 |
| Msa1421030 | AT4G05050.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.82e-16 | 78.6 |
| Msa1421030 | AT4G05050.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.19e-16 | 80.1 |
| Msa1421030 | AT4G05050.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.82e-16 | 78.6 |
| Msa1421030 | AT4G05050.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.19e-16 | 80.1 |
| Msa1421030 | AT4G05050.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.82e-16 | 78.6 |
| Msa1421030 | AT4G05320.7 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.21e-16 | 77.8 |
| Msa1421030 | AT4G05050.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.21e-16 | 77.8 |
| Msa1421030 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G05320.5 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G05320.5 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.14e-15 | 78.6 |
| Msa1421030 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G05320.8 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G05320.8 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.14e-15 | 78.6 |
| Msa1421030 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G02890.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G02890.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.14e-15 | 78.6 |
| Msa1421030 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G02890.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.65e-16 | 80.1 |
| Msa1421030 | AT4G02890.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.14e-15 | 78.6 |
| Msa1421030 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.22e-15 | 78.6 |
| Msa1421030 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.22e-15 | 78.6 |
| Msa1421030 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G03240.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.22e-15 | 78.6 |
| Msa1421030 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G20620.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 3.95e-16 | 80.1 |
| Msa1421030 | AT5G20620.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 1.22e-15 | 78.6 |
| Msa1421030 | AT1G65350.1 | 34.641 | 153 | 93 | 5 | 38 | 189 | 3 | 149 | 4.94e-16 | 80.1 |
| Msa1421030 | AT1G65350.1 | 31.361 | 169 | 103 | 6 | 26 | 189 | 65 | 225 | 2.50e-14 | 74.7 |
| Msa1421030 | AT1G65350.1 | 33.099 | 142 | 90 | 4 | 26 | 165 | 140 | 278 | 1.28e-12 | 69.7 |
| Msa1421030 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.54e-15 | 78.6 |
| Msa1421030 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.6 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.6 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.54e-15 | 78.6 |
| Msa1421030 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.3 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 8.18e-16 | 80.1 |
| Msa1421030 | AT4G05320.3 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.54e-15 | 78.6 |
| Msa1421030 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 8.71e-16 | 80.1 |
| Msa1421030 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 8.71e-16 | 80.1 |
| Msa1421030 | AT5G20620.1 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 8.71e-16 | 80.1 |
| Msa1421030 | AT5G20620.1 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 2.60e-15 | 78.6 |
| Msa1421030 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.2 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.2 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.71e-15 | 78.6 |
| Msa1421030 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 65 | 226 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 141 | 302 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 217 | 378 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.4 | 32.544 | 169 | 102 | 6 | 26 | 189 | 293 | 454 | 1.23e-15 | 80.1 |
| Msa1421030 | AT4G05320.4 | 34.615 | 156 | 90 | 6 | 38 | 189 | 3 | 150 | 3.71e-15 | 78.6 |
| Msa1421030 | AT1G55060.1 | 33.333 | 156 | 92 | 6 | 38 | 189 | 79 | 226 | 4.89e-15 | 75.5 |
| Msa1421030 | AT1G55060.1 | 32.450 | 151 | 91 | 5 | 43 | 189 | 7 | 150 | 2.76e-14 | 73.2 |
| Msa1421030 | AT1G31340.1 | 35.099 | 151 | 86 | 6 | 38 | 184 | 3 | 145 | 8.06e-15 | 72.8 |
| Msa1421030 | AT2G35635.1 | 34.459 | 148 | 91 | 5 | 38 | 184 | 3 | 145 | 8.22e-15 | 72.8 |
| Msa1421030 | AT5G37640.1 | 35.461 | 141 | 80 | 5 | 53 | 189 | 19 | 152 | 1.82e-14 | 75.1 |
| Msa1421030 | AT5G37640.1 | 33.333 | 165 | 98 | 6 | 28 | 187 | 69 | 226 | 2.72e-14 | 74.7 |
| Msa1421030 | AT5G37640.1 | 31.361 | 169 | 105 | 6 | 26 | 189 | 143 | 305 | 3.26e-13 | 71.6 |
| Msa1421030 | AT3G09790.2 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 5.11e-12 | 69.3 |
| Msa1421030 | AT3G09790.2 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 2.75e-11 | 67.0 |
| Msa1421030 | AT3G09790.1 | 34.532 | 139 | 80 | 5 | 53 | 187 | 19 | 150 | 5.11e-12 | 69.3 |
| Msa1421030 | AT3G09790.1 | 32.692 | 156 | 92 | 6 | 26 | 171 | 67 | 219 | 2.75e-11 | 67.0 |
Find 198 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTAGGTTTGGTCTTC+TGG | 0.077920 | tig0024906:-31351 | Msa1421030:five_prime_UTR |
| TTTACACCAATCACAAAATT+AGG | 0.088539 | tig0024906:-31479 | Msa1421030:five_prime_UTR |
| AATTAAAGCTTAACTATATC+TGG | 0.127212 | tig0024906:+31308 | None:intergenic |
| CGGGAAGGAGTATACCTTTC+AGG | 0.160755 | tig0024906:-30793 | Msa1421030:CDS |
| GGAAGTTGCTGCTTATATTT+TGG | 0.175078 | tig0024906:-30118 | Msa1421030:CDS |
| GTACCTTTGAATGGCTTTAT+TGG | 0.207540 | tig0024906:-29101 | Msa1421030:CDS |
| AGTGGCCGCCGATCATTATT+TGG | 0.232723 | tig0024906:-30084 | Msa1421030:CDS |
| AGGGGAAAGGGTTTGTTAAT+TGG | 0.233382 | tig0024906:+31586 | None:intergenic |
| TACACCTCTTAATTAATTAT+AGG | 0.234160 | tig0024906:-28555 | Msa1421030:three_prime_UTR |
| TCTGAAGCTAGTTCAACTTT+AGG | 0.241682 | tig0024906:+30381 | None:intergenic |
| TAATGGAAGTTGTGAGGATA+TGG | 0.244475 | tig0024906:-29941 | Msa1421030:CDS |
| GGATGCTGTTTCTGAGATTA+TGG | 0.256316 | tig0024906:-28785 | Msa1421030:CDS |
| GATGCAGAGGAAGGTGATTA+TGG | 0.260708 | tig0024906:-30516 | Msa1421030:CDS |
| ATTGTAACATTGGTAGAATT+AGG | 0.262976 | tig0024906:-31248 | Msa1421030:five_prime_UTR |
| TGAAATGGGACATCACTTAT+TGG | 0.267435 | tig0024906:-28510 | Msa1421030:three_prime_UTR |
| GAGTTGGCCAAGGAGCTTTC+AGG | 0.267673 | tig0024906:-30140 | Msa1421030:CDS |
| CTGAAGCTAGTTCAACTTTA+GGG | 0.274765 | tig0024906:+30382 | None:intergenic |
| TCCTGGTAGAGGTCTTATTT+TGG | 0.283272 | tig0024906:-30421 | Msa1421030:CDS |
| TTGAATTCTGCTATAGGATT+TGG | 0.285711 | tig0024906:-28716 | Msa1421030:three_prime_UTR |
| ACGATGAGAAATTAAGCTTC+TGG | 0.294300 | tig0024906:-31443 | Msa1421030:five_prime_UTR |
| TTTAACAAAATATCACAAAA+AGG | 0.297736 | tig0024906:+31382 | None:intergenic |
| AATTCCTTGCTCAAGGATTA+TGG | 0.299085 | tig0024906:-30891 | Msa1421030:CDS |
| TTGATTAGGTTTGGTCTTCT+GGG | 0.300503 | tig0024906:-31350 | Msa1421030:five_prime_UTR |
| CACACAACCTCCTGCTGTTC+AGG | 0.306369 | tig0024906:+30702 | None:intergenic |
| TGAACTAGCTTCAGAGGTTT+GGG | 0.315716 | tig0024906:-30373 | Msa1421030:CDS |
| TTGAACTAGCTTCAGAGGTT+TGG | 0.321874 | tig0024906:-30374 | Msa1421030:CDS |
| ATTGCCCTTCTGAAGTTTCA+TGG | 0.323760 | tig0024906:-29009 | Msa1421030:CDS |
| TACTTTATGCTCGACTCAAC+AGG | 0.327135 | tig0024906:-30273 | Msa1421030:CDS |
| CGAAGGAAATGTATTGCATT+TGG | 0.327882 | tig0024906:-30862 | Msa1421030:CDS |
| AACAATTTCTCCCTTGAAAC+AGG | 0.332507 | tig0024906:+31125 | None:intergenic |
| TTACACCAATCACAAAATTA+GGG | 0.337991 | tig0024906:-31478 | Msa1421030:five_prime_UTR |
| TTGTAACATTGGTAGAATTA+GGG | 0.341971 | tig0024906:-31247 | Msa1421030:five_prime_UTR |
| AATTAAGAGGTGTAAATATA+AGG | 0.346662 | tig0024906:+28564 | None:intergenic |
| GAGGGTTTGGCTGCTAAGTT+TGG | 0.346981 | tig0024906:-29988 | Msa1421030:CDS |
| TCATTAAGAATTATAATTGC+TGG | 0.348757 | tig0024906:+28741 | None:intergenic |
| ATGAAGTTGAATTCTGCTAT+AGG | 0.360435 | tig0024906:-28722 | Msa1421030:three_prime_UTR |
| AGCAGGAGGTTGTGTGTAAC+GGG | 0.363517 | tig0024906:-30695 | Msa1421030:CDS |
| ATTTAACCATCCAGAGGGTT+TGG | 0.373470 | tig0024906:-30001 | Msa1421030:CDS |
| TGGTGTTCCTCCGACTGTTA+TGG | 0.392395 | tig0024906:-30043 | Msa1421030:CDS |
| TTGAAAGGTGTAAGGATGTT+TGG | 0.396056 | tig0024906:-30770 | Msa1421030:CDS |
| GAGTTGTTTGTTGTTGTTGT+TGG | 0.400253 | tig0024906:+31543 | None:intergenic |
| CGATGAGAAATTAAGCTTCT+GGG | 0.403201 | tig0024906:-31442 | Msa1421030:five_prime_UTR |
| ATGATAAACACTACATATGA+TGG | 0.407373 | tig0024906:-30348 | Msa1421030:CDS |
| CAAATGTTCGTGGAGAATAA+TGG | 0.408480 | tig0024906:-29958 | Msa1421030:CDS |
| ACTCTTTGTTCAATGATTCT+CGG | 0.410247 | tig0024906:+28878 | None:intergenic |
| TTCGTTTATCTTTCGTACTC+GGG | 0.410681 | tig0024906:-31041 | Msa1421030:CDS |
| ACTTTAGGGTTAACAACAAC+CGG | 0.411541 | tig0024906:+30396 | None:intergenic |
| TTGAAGATTGTACCTTTGAA+TGG | 0.413144 | tig0024906:-29110 | Msa1421030:CDS |
| CTGAAAGGTATACTCCTTCC+CGG | 0.413982 | tig0024906:+30794 | None:intergenic |
| AATGAATTGTGGAACAAGAT+AGG | 0.414296 | tig0024906:+31662 | None:intergenic |
| GAAATGGGACATCACTTATT+GGG | 0.414712 | tig0024906:-28509 | Msa1421030:three_prime_UTR |
| TTTCGTTTATCTTTCGTACT+CGG | 0.416740 | tig0024906:-31042 | Msa1421030:CDS |
| TCAATGATCTCTGGAGAGTA+TGG | 0.416964 | tig0024906:+29063 | None:intergenic |
| CACAAAATTAGGGTTTATAG+AGG | 0.417605 | tig0024906:-31468 | Msa1421030:five_prime_UTR |
| TAAGAAACAGATTGCGGAAA+AGG | 0.427549 | tig0024906:-30742 | Msa1421030:CDS |
| CCTTCTGAAGTTTCATGGAT+GGG | 0.429432 | tig0024906:-29004 | Msa1421030:CDS |
| AACAAAAGTTGGTTTGTAAC+GGG | 0.431768 | tig0024906:-30932 | Msa1421030:CDS |
| TCAGTGTGAGAACTTGTTCC+GGG | 0.431902 | tig0024906:-30812 | Msa1421030:CDS |
| GGCCATGAGAAAGGATTTGC+TGG | 0.432160 | tig0024906:-30063 | Msa1421030:CDS |
| TCAGAAGCATGGTCGAGATT+CGG | 0.435796 | tig0024906:+28953 | None:intergenic |
| AGTTGGCCAAGGAGCTTTCA+GGG | 0.436183 | tig0024906:-30139 | Msa1421030:CDS |
| CTCAAAATTCAGAGGAATGA+AGG | 0.437343 | tig0024906:-30966 | Msa1421030:CDS |
| TCATTATTTGGCCATGAGAA+AGG | 0.439250 | tig0024906:-30072 | Msa1421030:CDS |
| TATGCTTTGTAGAAGTGAAA+TGG | 0.442264 | tig0024906:-28525 | Msa1421030:three_prime_UTR |
| CCACTCTGAGTCCTGTTTCA+AGG | 0.444085 | tig0024906:-31136 | Msa1421030:CDS |
| AGGCAGTATCCATGATCAAT+TGG | 0.445883 | tig0024906:+29787 | None:intergenic |
| ATCAGGCTTCCAATGGCAAA+AGG | 0.446075 | tig0024906:+28904 | None:intergenic |
| TTTATGTAGTCAATGATCTC+TGG | 0.446436 | tig0024906:+29054 | None:intergenic |
| GTACCCTCTGCAGATCTGAT+TGG | 0.447790 | tig0024906:+30306 | None:intergenic |
| CTTTCAGGTTGAAAGGTGTA+AGG | 0.447803 | tig0024906:-30778 | Msa1421030:CDS |
| ATCAGTGTGAGAACTTGTTC+CGG | 0.450830 | tig0024906:-30813 | Msa1421030:CDS |
| ATAACCTATAATTAATTAAG+AGG | 0.453249 | tig0024906:+28551 | None:intergenic |
| TCCGATGCGTGTGCTACCTT+CGG | 0.458516 | tig0024906:-31009 | Msa1421030:CDS |
| TGTTGTTGGAATTCAAGATT+CGG | 0.463060 | tig0024906:+31557 | None:intergenic |
| CCCTTCTGAAGTTTCATGGA+TGG | 0.463805 | tig0024906:-29005 | Msa1421030:CDS |
| CAGTGATTTGTACAGATATG+TGG | 0.472757 | tig0024906:-31278 | Msa1421030:five_prime_UTR |
| ATGCAGAGGAAGGTGATTAT+GGG | 0.474524 | tig0024906:-30515 | Msa1421030:CDS |
| AGTGACAAACAAACAAAAGT+TGG | 0.478794 | tig0024906:-30943 | Msa1421030:CDS |
| TCAATGATTCTCGGCACATC+AGG | 0.479856 | tig0024906:+28887 | None:intergenic |
| AATTCAAGATTCGGAAAAGA+AGG | 0.480058 | tig0024906:+31566 | None:intergenic |
| GCACTCGATTCTGTTCTTCC+TGG | 0.480120 | tig0024906:-28829 | Msa1421030:CDS |
| AACTTAGCAGCCAAACCCTC+TGG | 0.480352 | tig0024906:+29991 | None:intergenic |
| CAATATCTTCTTCAGCATCA+AGG | 0.481634 | tig0024906:+29028 | None:intergenic |
| TAGCAAAGAAGATGCGAGAA+AGG | 0.482978 | tig0024906:-30481 | Msa1421030:CDS |
| GGATTACATAATCCATTGGT+TGG | 0.483000 | tig0024906:+31098 | None:intergenic |
| GAGAAGAGAAGAATGAATTG+TGG | 0.483865 | tig0024906:+31651 | None:intergenic |
| ATGCTTTGTAGAAGTGAAAT+GGG | 0.485180 | tig0024906:-28524 | Msa1421030:three_prime_UTR |
| CACTCTGAGTCCTGTTTCAA+GGG | 0.486062 | tig0024906:-31135 | Msa1421030:CDS |
| GCAAATGCAGATAGGCATGC+TGG | 0.489456 | tig0024906:-29859 | Msa1421030:CDS |
| CAACTTCCCTGAAAGCTCCT+TGG | 0.490176 | tig0024906:+30133 | None:intergenic |
| CAAATGCAATACATTTCCTT+CGG | 0.490209 | tig0024906:+30863 | None:intergenic |
| CATCACTTATTGGGAAATTG+TGG | 0.491653 | tig0024906:-28500 | Msa1421030:three_prime_UTR |
| TGGTGATCTCATCAAGGTGC+TGG | 0.493158 | tig0024906:+28761 | None:intergenic |
| AACAAAGAGTCTGTGATTGA+AGG | 0.493159 | tig0024906:-28865 | Msa1421030:CDS |
| TCAGGCTTCCAATGGCAAAA+GGG | 0.499240 | tig0024906:+28905 | None:intergenic |
| TTAGGTTTGGTCTTCTGGGT+TGG | 0.500181 | tig0024906:-31346 | Msa1421030:five_prime_UTR |
| ACCTTTGTCGTTAGACGGTG+AGG | 0.502471 | tig0024906:-30181 | Msa1421030:CDS |
| ACATATGATGGGCTAGATAG+TGG | 0.509383 | tig0024906:-30336 | Msa1421030:CDS |
| TGGTTCCTTGCAAATGTTCG+TGG | 0.511177 | tig0024906:-29968 | Msa1421030:CDS |
| AAATATGCGGATGTTAGTAC+AGG | 0.514113 | tig0024906:-30591 | Msa1421030:CDS |
| GGTGCATAAAATTACTGTGC+TGG | 0.516372 | tig0024906:-29893 | Msa1421030:CDS |
| CAGCAGGAGGTTGTGTGTAA+CGG | 0.517620 | tig0024906:-30696 | Msa1421030:CDS |
| AAACAAAAGTTGGTTTGTAA+CGG | 0.520140 | tig0024906:-30933 | Msa1421030:CDS |
| TCGAGAAATGCTCCTGGTAG+AGG | 0.521176 | tig0024906:-30432 | Msa1421030:CDS |
| ATTAAAGCTTAACTATATCT+GGG | 0.522718 | tig0024906:+31309 | None:intergenic |
| TGAGACTTGCAAATGCAGAT+AGG | 0.524034 | tig0024906:-29867 | Msa1421030:CDS |
| AACGACAAAGGTAAACCTCT+AGG | 0.535148 | tig0024906:+30192 | None:intergenic |
| GTTTGCTGATCCTGAACAGC+AGG | 0.535234 | tig0024906:-30712 | Msa1421030:CDS |
| ATCAGATCTGCAGAGGGTAC+AGG | 0.535943 | tig0024906:-30303 | Msa1421030:CDS |
| TGATCTCTGGAGAGTATGGC+TGG | 0.536526 | tig0024906:+29067 | None:intergenic |
| AGTATACCTTTCAGGTTGAA+AGG | 0.537419 | tig0024906:-30785 | Msa1421030:CDS |
| TAAAGTTGAACTAGCTTCAG+AGG | 0.543230 | tig0024906:-30379 | Msa1421030:CDS |
| AATGGAAGTTGTGAGGATAT+GGG | 0.547910 | tig0024906:-29940 | Msa1421030:CDS |
| TCTCGACATAATCCGTTCGA+TGG | 0.553249 | tig0024906:+30449 | None:intergenic |
| GCGGAGCAATTCCTTGCTCA+AGG | 0.554560 | tig0024906:-30898 | Msa1421030:CDS |
| GGTCGAGATTCGGAGAGTGC+GGG | 0.554690 | tig0024906:+28963 | None:intergenic |
| AAATGAAGTGCTTACACTAG+TGG | 0.555410 | tig0024906:+29762 | None:intergenic |
| CTTACACCTTTCAACCTGAA+AGG | 0.556700 | tig0024906:+30779 | None:intergenic |
| AATGAAGTGCTTACACTAGT+GGG | 0.557248 | tig0024906:+29763 | None:intergenic |
| CCTTTGTCGTTAGACGGTGA+GGG | 0.557986 | tig0024906:-30180 | Msa1421030:CDS |
| GAGTATGGCTGGCGAGCTTG+AGG | 0.559426 | tig0024906:+29078 | None:intergenic |
| GGTTTACCTTTGTCGTTAGA+CGG | 0.560560 | tig0024906:-30186 | Msa1421030:CDS |
| AATATCTTCTTCAGCATCAA+GGG | 0.561373 | tig0024906:+29029 | None:intergenic |
| AAATTGTTGTCTCCAACCAA+TGG | 0.562278 | tig0024906:-31110 | Msa1421030:CDS |
| TCCTTCACCGGAAAAGCACC+AGG | 0.562505 | tig0024906:+29916 | None:intergenic |
| CAAATGCAGATAGGCATGCT+GGG | 0.565622 | tig0024906:-29858 | Msa1421030:CDS |
| GCCTATGGATGAAGAGCCGA+TGG | 0.567919 | tig0024906:-30226 | Msa1421030:CDS |
| GATTCGGAAAAGAAGGGGAA+AGG | 0.568192 | tig0024906:+31573 | None:intergenic |
| CAGTGGATTACATAATCCAT+TGG | 0.571392 | tig0024906:+31094 | None:intergenic |
| ATTCAAGATTCGGAAAAGAA+GGG | 0.572787 | tig0024906:+31567 | None:intergenic |
| ACGACAAAGGTAAACCTCTA+GGG | 0.574374 | tig0024906:+30193 | None:intergenic |
| AAAGTTGGTTTGTAACGGGC+GGG | 0.575171 | tig0024906:-30928 | Msa1421030:CDS |
| ATTCTCCACGAACATTTGCA+AGG | 0.577079 | tig0024906:+29963 | None:intergenic |
| ATTCGGAAAAGAAGGGGAAA+GGG | 0.577319 | tig0024906:+31574 | None:intergenic |
| CTAGGGTTATTCACAGCCAT+CGG | 0.577439 | tig0024906:+30210 | None:intergenic |
| TGATAAACACTACATATGAT+GGG | 0.578850 | tig0024906:-30347 | Msa1421030:CDS |
| TGGCTTTAGAATTGTAACAT+TGG | 0.583903 | tig0024906:-31258 | Msa1421030:five_prime_UTR |
| AAGAATTCTGATGCAGAGGA+AGG | 0.584591 | tig0024906:-30525 | Msa1421030:CDS |
| TGTTCTTCCTGGTACTAGTG+AGG | 0.584732 | tig0024906:-28818 | Msa1421030:CDS |
| CAGGCTTCCAATGGCAAAAG+GGG | 0.586520 | tig0024906:+28906 | None:intergenic |
| GAAAGAATGTGTTAAGACCA+AGG | 0.588376 | tig0024906:+28597 | None:intergenic |
| GTAACGGGCGGGAGTTGTCG+CGG | 0.589575 | tig0024906:-30917 | Msa1421030:CDS |
| CACCAGCAAATCCTTTCTCA+TGG | 0.593275 | tig0024906:+30061 | None:intergenic |
| AGAGTGCGGGCGCATTCGAG+TGG | 0.593444 | tig0024906:+28976 | None:intergenic |
| CCCATCCATGAAACTTCAGA+AGG | 0.594790 | tig0024906:+29004 | None:intergenic |
| ATCTGCAGAGGGTACAGGTG+GGG | 0.594998 | tig0024906:-30298 | Msa1421030:CDS |
| TTCAAGATTCGGAAAAGAAG+GGG | 0.595412 | tig0024906:+31568 | None:intergenic |
| TCGGCACATCAGGCTTCCAA+TGG | 0.595760 | tig0024906:+28897 | None:intergenic |
| ACTGACTCAATTGTATCCGA+AGG | 0.597171 | tig0024906:+30993 | None:intergenic |
| AGATCTGCAGAGGGTACAGG+TGG | 0.599302 | tig0024906:-30300 | Msa1421030:CDS |
| AAAGTAGCCTCACTAGTACC+AGG | 0.600234 | tig0024906:+28811 | None:intergenic |
| CAGAGGAAGGTGATTATGGG+AGG | 0.601611 | tig0024906:-30512 | Msa1421030:CDS |
| ATTGCATTTGGTGATTCGAC+TGG | 0.602103 | tig0024906:-30850 | Msa1421030:CDS |
| AAAGAATGTGTTAAGACCAA+GGG | 0.602876 | tig0024906:+28598 | None:intergenic |
| CAATTGGAATCAAAACAGCC+TGG | 0.604227 | tig0024906:+29803 | None:intergenic |
| TCCGAAGGTAGCACACGCAT+CGG | 0.605294 | tig0024906:+31008 | None:intergenic |
| TGCTGATCCTGAACAGCAGG+AGG | 0.606146 | tig0024906:-30709 | Msa1421030:CDS |
| TTCTCCAATCAGATCTGCAG+AGG | 0.606887 | tig0024906:-30310 | Msa1421030:CDS |
| TCTCATGGCCAAATAATGAT+CGG | 0.609397 | tig0024906:+30076 | None:intergenic |
| AATTGCTGGTGATCTCATCA+AGG | 0.609496 | tig0024906:+28755 | None:intergenic |
| TGGTCGAGATTCGGAGAGTG+CGG | 0.613622 | tig0024906:+28962 | None:intergenic |
| GCCATCGGCTCTTCATCCAT+AGG | 0.614196 | tig0024906:+30225 | None:intergenic |
| TCGTTTATCTTTCGTACTCG+GGG | 0.614739 | tig0024906:-31040 | Msa1421030:CDS |
| TCCAAAATAAGACCTCTACC+AGG | 0.616093 | tig0024906:+30420 | None:intergenic |
| AGGCCAATAAAGCCATTCAA+AGG | 0.616797 | tig0024906:+29098 | None:intergenic |
| TATGAAGAATTCTGATGCAG+AGG | 0.617375 | tig0024906:-30529 | Msa1421030:CDS |
| AAAAGTTGGTTTGTAACGGG+CGG | 0.617558 | tig0024906:-30929 | Msa1421030:CDS |
| GGAACAAGTTCTCACACTGA+TGG | 0.618065 | tig0024906:+30815 | None:intergenic |
| AACTCCATAATCCTTGAGCA+AGG | 0.619740 | tig0024906:+30887 | None:intergenic |
| AAGGATTATGGAGTTACCGA+AGG | 0.621322 | tig0024906:-30879 | Msa1421030:CDS |
| TGTGAGAACTTGTTCCGGGA+AGG | 0.622079 | tig0024906:-30808 | Msa1421030:CDS |
| AGGAGTATGAAGCCATCGAA+CGG | 0.625133 | tig0024906:-30461 | Msa1421030:CDS |
| AAAGCATTTAACCATCCAGA+GGG | 0.626201 | tig0024906:-30006 | Msa1421030:CDS |
| CAGTGAAACTCAAAATTCAG+AGG | 0.628770 | tig0024906:-30974 | Msa1421030:CDS |
| ACTTTATGCTCGACTCAACA+GGG | 0.629476 | tig0024906:-30272 | Msa1421030:CDS |
| AAGATAGGAGGAGCGCGTAG+TGG | 0.631735 | tig0024906:+31677 | None:intergenic |
| TAGCAGCCAAACCCTCTGGA+TGG | 0.631866 | tig0024906:+29995 | None:intergenic |
| GTAATGGGTAATGACTCCCT+TGG | 0.634850 | tig0024906:-28614 | Msa1421030:three_prime_UTR |
| CCCTCACCGTCTAACGACAA+AGG | 0.638858 | tig0024906:+30180 | None:intergenic |
| GTATGTTAAGAAACAGATTG+CGG | 0.640425 | tig0024906:-30748 | Msa1421030:CDS |
| GAATTGTGGAACAAGATAGG+AGG | 0.640471 | tig0024906:+31665 | None:intergenic |
| AAGGGTACAAGAGTTGGCCA+AGG | 0.641585 | tig0024906:-30150 | Msa1421030:CDS |
| AAGCACTTTGCCATAACAGT+CGG | 0.642352 | tig0024906:+30033 | None:intergenic |
| GGAGAATAATGGAAGTTGTG+AGG | 0.648120 | tig0024906:-29947 | Msa1421030:CDS |
| TCTCCAATCAGATCTGCAGA+GGG | 0.648500 | tig0024906:-30309 | Msa1421030:CDS |
| ATTATGTCGAGAAATGCTCC+TGG | 0.652932 | tig0024906:-30438 | Msa1421030:CDS |
| AAGTGCTTACACTAGTGGGA+AGG | 0.656001 | tig0024906:+29767 | None:intergenic |
| GATCTGCAGAGGGTACAGGT+GGG | 0.656279 | tig0024906:-30299 | Msa1421030:CDS |
| AGTTGTGAGGATATGGGACC+TGG | 0.656793 | tig0024906:-29934 | Msa1421030:CDS |
| CACTTTGCCATAACAGTCGG+AGG | 0.659075 | tig0024906:+30036 | None:intergenic |
| CCATCCATGAAACTTCAGAA+GGG | 0.666106 | tig0024906:+29005 | None:intergenic |
| CAAAGCATTTAACCATCCAG+AGG | 0.671281 | tig0024906:-30007 | Msa1421030:CDS |
| AGATTCGAAGACAAGTGCAG+TGG | 0.674817 | tig0024906:+31077 | None:intergenic |
| CCTTGAAACAGGACTCAGAG+TGG | 0.679484 | tig0024906:+31136 | None:intergenic |
| CATGGCCAAATAATGATCGG+CGG | 0.694496 | tig0024906:+30079 | None:intergenic |
| AATATGCGGATGTTAGTACA+GGG | 0.697062 | tig0024906:-30590 | Msa1421030:CDS |
| GCAGGAGGTTGTGTGTAACG+GGG | 0.717392 | tig0024906:-30694 | Msa1421030:CDS |
| ATGGCTGTGAATAACCCTAG+AGG | 0.736670 | tig0024906:-30207 | Msa1421030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATTTGATTTTGATT+AGG | - | tig0024906:28844-28863 | Msa1421030:CDS | 10.0% |
| !!! | AAAGTTAAACATTATTTTAT+TGG | - | tig0024906:30921-30940 | Msa1421030:CDS | 10.0% |
| !! | TTTAACAAAATATCACAAAA+AGG | + | tig0024906:28829-28848 | None:intergenic | 15.0% |
| !! | AATAAAAGTTGTAATATCTA+AGG | - | tig0024906:30657-30676 | Msa1421030:CDS | 15.0% |
| !! | AAAAAAAAAAAGACAATCAT+TGG | + | tig0024906:31559-31578 | None:intergenic | 15.0% |
| !! | ATAACCTATAATTAATTAAG+AGG | + | tig0024906:31660-31679 | None:intergenic | 15.0% |
| !!! | AACAATCTTTTTGATTGAAA+AGG | + | tig0024906:28806-28825 | None:intergenic | 20.0% |
| !!! | AATTTGATTTTGATTAGGTT+TGG | - | tig0024906:28849-28868 | Msa1421030:CDS | 20.0% |
| !! | ATTAAAGCTTAACTATATCT+GGG | + | tig0024906:28902-28921 | None:intergenic | 20.0% |
| !! | AATTAAAGCTTAACTATATC+TGG | + | tig0024906:28903-28922 | None:intergenic | 20.0% |
| !! | CAAATTCAATGAAAAACTAA+AGG | + | tig0024906:29007-29026 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGAACAAAATATG+CGG | - | tig0024906:29604-29623 | Msa1421030:intron | 20.0% |
| !!! | GTTAAACATTATTTTATTGG+TGG | - | tig0024906:30924-30943 | Msa1421030:CDS | 20.0% |
| !!! | TTTTTTTCTCTTGATGTTTA+GGG | - | tig0024906:30979-30998 | Msa1421030:CDS | 20.0% |
| !! | TCATTAAGAATTATAATTGC+TGG | + | tig0024906:31470-31489 | None:intergenic | 20.0% |
| !!! | TTTAATTGTTTTCACAGTAA+TGG | - | tig0024906:31578-31597 | Msa1421030:five_prime_UTR | 20.0% |
| !!! | TTAATTGTTTTCACAGTAAT+GGG | - | tig0024906:31579-31598 | Msa1421030:five_prime_UTR | 20.0% |
| !!! | AATTAAGAGGTGTAAATATA+AGG | + | tig0024906:31647-31666 | None:intergenic | 20.0% |
| !! | TACACCTCTTAATTAATTAT+AGG | - | tig0024906:31653-31672 | Msa1421030:five_prime_UTR | 20.0% |
| ! | TTTACACCAATCACAAAATT+AGG | - | tig0024906:28729-28748 | Msa1421030:exon | 25.0% |
| ! | TTACACCAATCACAAAATTA+GGG | - | tig0024906:28730-28749 | Msa1421030:exon | 25.0% |
| !! | ATAAACCCTAATTTTGTGAT+TGG | + | tig0024906:28738-28757 | None:intergenic | 25.0% |
| ! | ATTGTAACATTGGTAGAATT+AGG | - | tig0024906:28960-28979 | Msa1421030:CDS | 25.0% |
| ! | TTGTAACATTGGTAGAATTA+GGG | - | tig0024906:28961-28980 | Msa1421030:CDS | 25.0% |
| !!! | AAACAAAAGTTGGTTTGTAA+CGG | - | tig0024906:29275-29294 | Msa1421030:intron | 25.0% |
| ! | ATGATAAACACTACATATGA+TGG | - | tig0024906:29860-29879 | Msa1421030:CDS | 25.0% |
| ! | TGATAAACACTACATATGAT+GGG | - | tig0024906:29861-29880 | Msa1421030:CDS | 25.0% |
| ! | GTTATAACTTAATCAGTTGT+AGG | - | tig0024906:30548-30567 | Msa1421030:CDS | 25.0% |
| ! | AACTATACTTAATGCCATAA+TGG | + | tig0024906:30622-30641 | None:intergenic | 25.0% |
| ! | AATCTGAAAAACAATCCAAA+AGG | + | tig0024906:30686-30705 | None:intergenic | 25.0% |
| ! | TAACACCAAAGTTAATGATT+TGG | - | tig0024906:30831-30850 | Msa1421030:CDS | 25.0% |
| ! | TCTATCCAAATCATTAACTT+TGG | + | tig0024906:30839-30858 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCTCTTGATGTTT+AGG | - | tig0024906:30978-30997 | Msa1421030:CDS | 25.0% |
| !!! | TTTTTTCTCTTGATGTTTAG+GGG | - | tig0024906:30980-30999 | Msa1421030:CDS | 25.0% |
| AATGAATTGTGGAACAAGAT+AGG | + | tig0024906:28549-28568 | None:intergenic | 30.0% | |
| ! | TGAAATTTCTCTCTCGTTTT+TGG | - | tig0024906:28586-28605 | Msa1421030:three_prime_UTR | 30.0% |
| ATTCAAGATTCGGAAAAGAA+GGG | + | tig0024906:28644-28663 | None:intergenic | 30.0% | |
| AATTCAAGATTCGGAAAAGA+AGG | + | tig0024906:28645-28664 | None:intergenic | 30.0% | |
| TGTTGTTGGAATTCAAGATT+CGG | + | tig0024906:28654-28673 | None:intergenic | 30.0% | |
| CACAAAATTAGGGTTTATAG+AGG | - | tig0024906:28740-28759 | Msa1421030:exon | 30.0% | |
| !! | TGGCTTTAGAATTGTAACAT+TGG | - | tig0024906:28950-28969 | Msa1421030:CDS | 30.0% |
| ! | ATTGGTAGAATTAGGGTTTT+TGG | - | tig0024906:28968-28987 | Msa1421030:CDS | 30.0% |
| TTTCGTTTATCTTTCGTACT+CGG | - | tig0024906:29166-29185 | Msa1421030:intron | 30.0% | |
| AGTGACAAACAAACAAAAGT+TGG | - | tig0024906:29265-29284 | Msa1421030:intron | 30.0% | |
| !! | AACAAAAGTTGGTTTGTAAC+GGG | - | tig0024906:29276-29295 | Msa1421030:intron | 30.0% |
| CAAATGCAATACATTTCCTT+CGG | + | tig0024906:29348-29367 | None:intergenic | 30.0% | |
| GTATGTTAAGAAACAGATTG+CGG | - | tig0024906:29460-29479 | Msa1421030:intron | 30.0% | |
| AACAGGGCAAAAATATGTAT+CGG | - | tig0024906:29952-29971 | Msa1421030:CDS | 30.0% | |
| ! | TTAAAAAAGGGTACAAGAGT+TGG | - | tig0024906:30052-30071 | Msa1421030:CDS | 30.0% |
| !!! | GTTTTGATTCCAATTGATCA+TGG | - | tig0024906:30412-30431 | Msa1421030:CDS | 30.0% |
| GATTAAGTTATAACCAGACA+AGG | + | tig0024906:30542-30561 | None:intergenic | 30.0% | |
| ATGAAGGTAATATCATGCTA+GGG | + | tig0024906:30760-30779 | None:intergenic | 30.0% | |
| AACAAAGAGAATAGTAGCAT+CGG | + | tig0024906:30804-30823 | None:intergenic | 30.0% | |
| !! | ACTGCATGTATTTTGAGTAA+TGG | - | tig0024906:30880-30899 | Msa1421030:CDS | 30.0% |
| GAGTAATGGCAATTGTAATT+AGG | - | tig0024906:30894-30913 | Msa1421030:CDS | 30.0% | |
| GGCATTATTTACCTATTTGA+AGG | - | tig0024906:30945-30964 | Msa1421030:CDS | 30.0% | |
| GAATGCAAAATCCTTCAAAT+AGG | + | tig0024906:30959-30978 | None:intergenic | 30.0% | |
| TTGAAGATTGTACCTTTGAA+TGG | - | tig0024906:31098-31117 | Msa1421030:CDS | 30.0% | |
| TTTATGTAGTCAATGATCTC+TGG | + | tig0024906:31157-31176 | None:intergenic | 30.0% | |
| AATATCTTCTTCAGCATCAA+GGG | + | tig0024906:31182-31201 | None:intergenic | 30.0% | |
| ACTCTTTGTTCAATGATTCT+CGG | + | tig0024906:31333-31352 | None:intergenic | 30.0% | |
| ATGAAGTTGAATTCTGCTAT+AGG | - | tig0024906:31486-31505 | Msa1421030:five_prime_UTR | 30.0% | |
| TTGAATTCTGCTATAGGATT+TGG | - | tig0024906:31492-31511 | Msa1421030:five_prime_UTR | 30.0% | |
| AAAGAATGTGTTAAGACCAA+GGG | + | tig0024906:31613-31632 | None:intergenic | 30.0% | |
| TATGCTTTGTAGAAGTGAAA+TGG | - | tig0024906:31683-31702 | Msa1421030:five_prime_UTR | 30.0% | |
| ATGCTTTGTAGAAGTGAAAT+GGG | - | tig0024906:31684-31703 | Msa1421030:five_prime_UTR | 30.0% | |
| GAGAAGAGAAGAATGAATTG+TGG | + | tig0024906:28560-28579 | None:intergenic | 35.0% | |
| TTCAAGATTCGGAAAAGAAG+GGG | + | tig0024906:28643-28662 | None:intergenic | 35.0% | |
| !! | GAGTTGTTTGTTGTTGTTGT+TGG | + | tig0024906:28668-28687 | None:intergenic | 35.0% |
| ACAACTCTTCTTCTTCTTCT+CGG | - | tig0024906:28681-28700 | Msa1421030:three_prime_UTR | 35.0% | |
| ACGATGAGAAATTAAGCTTC+TGG | - | tig0024906:28765-28784 | Msa1421030:CDS | 35.0% | |
| CGATGAGAAATTAAGCTTCT+GGG | - | tig0024906:28766-28785 | Msa1421030:CDS | 35.0% | |
| ! | TTTGATTAGGTTTGGTCTTC+TGG | - | tig0024906:28857-28876 | Msa1421030:CDS | 35.0% |
| ! | TTGATTAGGTTTGGTCTTCT+GGG | - | tig0024906:28858-28877 | Msa1421030:CDS | 35.0% |
| ! | CAGTGATTTGTACAGATATG+TGG | - | tig0024906:28930-28949 | Msa1421030:CDS | 35.0% |
| AGTTGAAAAATGTCTTCTGC+TGG | - | tig0024906:29044-29063 | Msa1421030:CDS | 35.0% | |
| AACAATTTCTCCCTTGAAAC+AGG | + | tig0024906:29086-29105 | None:intergenic | 35.0% | |
| AAATTGTTGTCTCCAACCAA+TGG | - | tig0024906:29098-29117 | Msa1421030:CDS | 35.0% | |
| GGATTACATAATCCATTGGT+TGG | + | tig0024906:29113-29132 | None:intergenic | 35.0% | |
| !! | CAGTGGATTACATAATCCAT+TGG | + | tig0024906:29117-29136 | None:intergenic | 35.0% |
| TTCGTTTATCTTTCGTACTC+GGG | - | tig0024906:29167-29186 | Msa1421030:intron | 35.0% | |
| CAGTGAAACTCAAAATTCAG+AGG | - | tig0024906:29234-29253 | Msa1421030:intron | 35.0% | |
| CTCAAAATTCAGAGGAATGA+AGG | - | tig0024906:29242-29261 | Msa1421030:intron | 35.0% | |
| AATTCCTTGCTCAAGGATTA+TGG | - | tig0024906:29317-29336 | Msa1421030:intron | 35.0% | |
| CGAAGGAAATGTATTGCATT+TGG | - | tig0024906:29346-29365 | Msa1421030:intron | 35.0% | |
| !! | AGTATACCTTTCAGGTTGAA+AGG | - | tig0024906:29423-29442 | Msa1421030:intron | 35.0% |
| ! | TTGAAAGGTGTAAGGATGTT+TGG | - | tig0024906:29438-29457 | Msa1421030:intron | 35.0% |
| TAAGAAACAGATTGCGGAAA+AGG | - | tig0024906:29466-29485 | Msa1421030:intron | 35.0% | |
| AAATATGCGGATGTTAGTAC+AGG | - | tig0024906:29617-29636 | Msa1421030:intron | 35.0% | |
| AATATGCGGATGTTAGTACA+GGG | - | tig0024906:29618-29637 | Msa1421030:intron | 35.0% | |
| TATGAAGAATTCTGATGCAG+AGG | - | tig0024906:29679-29698 | Msa1421030:intron | 35.0% | |
| !! | ACTTTAGGGTTAACAACAAC+CGG | + | tig0024906:29815-29834 | None:intergenic | 35.0% |
| CTGAAGCTAGTTCAACTTTA+GGG | + | tig0024906:29829-29848 | None:intergenic | 35.0% | |
| ! | TCTGAAGCTAGTTCAACTTT+AGG | + | tig0024906:29830-29849 | None:intergenic | 35.0% |
| ! | TAAAGTTGAACTAGCTTCAG+AGG | - | tig0024906:29829-29848 | Msa1421030:CDS | 35.0% |
| !! | GGAAGTTGCTGCTTATATTT+TGG | - | tig0024906:30090-30109 | Msa1421030:CDS | 35.0% |
| ! | ATTTTGGATCATCCAATGAG+TGG | - | tig0024906:30106-30125 | Msa1421030:CDS | 35.0% |
| TCTCATGGCCAAATAATGAT+CGG | + | tig0024906:30135-30154 | None:intergenic | 35.0% | |
| TCATTATTTGGCCATGAGAA+AGG | - | tig0024906:30136-30155 | Msa1421030:CDS | 35.0% | |
| ! | AAAGCATTTAACCATCCAGA+GGG | - | tig0024906:30202-30221 | Msa1421030:CDS | 35.0% |
| CAAATGTTCGTGGAGAATAA+TGG | - | tig0024906:30250-30269 | Msa1421030:CDS | 35.0% | |
| TAATGGAAGTTGTGAGGATA+TGG | - | tig0024906:30267-30286 | Msa1421030:CDS | 35.0% | |
| AATGGAAGTTGTGAGGATAT+GGG | - | tig0024906:30268-30287 | Msa1421030:CDS | 35.0% | |
| CTTGGCAAAGAGAAGAAAAA+TGG | - | tig0024906:30382-30401 | Msa1421030:CDS | 35.0% | |
| ! | AATGAAGTGCTTACACTAGT+GGG | + | tig0024906:30448-30467 | None:intergenic | 35.0% |
| ! | AAATGAAGTGCTTACACTAG+TGG | + | tig0024906:30449-30468 | None:intergenic | 35.0% |
| ! | GCTTTATTGTTCTCTTGATG+TGG | - | tig0024906:30498-30517 | Msa1421030:CDS | 35.0% |
| !!! | AACTTTTGTTTTGCCTTGTC+TGG | - | tig0024906:30526-30545 | Msa1421030:CDS | 35.0% |
| !! | TAATATCTAAGGCCTCCTTT+TGG | - | tig0024906:30668-30687 | Msa1421030:CDS | 35.0% |
| CTGAAAAACAATCCAAAAGG+AGG | + | tig0024906:30683-30702 | None:intergenic | 35.0% | |
| TATGAGTGAGTAATGTAACC+TGG | - | tig0024906:30713-30732 | Msa1421030:CDS | 35.0% | |
| !! | AATGTAACCTGGAGTGTTTT+TGG | - | tig0024906:30724-30743 | Msa1421030:CDS | 35.0% |
| ATAACTACCAAAAACACTCC+AGG | + | tig0024906:30734-30753 | None:intergenic | 35.0% | |
| CATGAAGGTAATATCATGCT+AGG | + | tig0024906:30761-30780 | None:intergenic | 35.0% | |
| CAAAAAAAACCTTGAGTGAG+TGG | + | tig0024906:31065-31084 | None:intergenic | 35.0% | |
| !! | GTACCTTTGAATGGCTTTAT+TGG | - | tig0024906:31107-31126 | Msa1421030:CDS | 35.0% |
| CAATATCTTCTTCAGCATCA+AGG | + | tig0024906:31183-31202 | None:intergenic | 35.0% | |
| ! | ATGCTTCTGAAAAAAGGAGT+GGG | - | tig0024906:31268-31287 | Msa1421030:five_prime_UTR | 35.0% |
| AACAAAGAGTCTGTGATTGA+AGG | - | tig0024906:31343-31362 | Msa1421030:five_prime_UTR | 35.0% | |
| !!! | TACTAGTGAGGCTACTTTTA+TGG | - | tig0024906:31402-31421 | Msa1421030:five_prime_UTR | 35.0% |
| GAAAGAATGTGTTAAGACCA+AGG | + | tig0024906:31614-31633 | None:intergenic | 35.0% | |
| TGAAATGGGACATCACTTAT+TGG | - | tig0024906:31698-31717 | Msa1421030:five_prime_UTR | 35.0% | |
| GAAATGGGACATCACTTATT+GGG | - | tig0024906:31699-31718 | Msa1421030:five_prime_UTR | 35.0% | |
| CATCACTTATTGGGAAATTG+TGG | - | tig0024906:31708-31727 | Msa1421030:five_prime_UTR | 35.0% | |
| GAATTGTGGAACAAGATAGG+AGG | + | tig0024906:28546-28565 | None:intergenic | 40.0% | |
| !! | AGGGGAAAGGGTTTGTTAAT+TGG | + | tig0024906:28625-28644 | None:intergenic | 40.0% |
| ATTCGGAAAAGAAGGGGAAA+GGG | + | tig0024906:28637-28656 | None:intergenic | 40.0% | |
| TCGTTTATCTTTCGTACTCG+GGG | - | tig0024906:29168-29187 | Msa1421030:intron | 40.0% | |
| ! | ACTGACTCAATTGTATCCGA+AGG | + | tig0024906:29218-29237 | None:intergenic | 40.0% |
| !! | AAAAGTTGGTTTGTAACGGG+CGG | - | tig0024906:29279-29298 | Msa1421030:intron | 40.0% |
| AACTCCATAATCCTTGAGCA+AGG | + | tig0024906:29324-29343 | None:intergenic | 40.0% | |
| AAGGATTATGGAGTTACCGA+AGG | - | tig0024906:29329-29348 | Msa1421030:intron | 40.0% | |
| ! | ATTGCATTTGGTGATTCGAC+TGG | - | tig0024906:29358-29377 | Msa1421030:intron | 40.0% |
| ! | ATCAGTGTGAGAACTTGTTC+CGG | - | tig0024906:29395-29414 | Msa1421030:intron | 40.0% |
| CTTACACCTTTCAACCTGAA+AGG | + | tig0024906:29432-29451 | None:intergenic | 40.0% | |
| !! | CTTTCAGGTTGAAAGGTGTA+AGG | - | tig0024906:29430-29449 | Msa1421030:intron | 40.0% |
| AAGAATTCTGATGCAGAGGA+AGG | - | tig0024906:29683-29702 | Msa1421030:intron | 40.0% | |
| ATGCAGAGGAAGGTGATTAT+GGG | - | tig0024906:29693-29712 | Msa1421030:intron | 40.0% | |
| TAGCAAAGAAGATGCGAGAA+AGG | - | tig0024906:29727-29746 | Msa1421030:intron | 40.0% | |
| ATTATGTCGAGAAATGCTCC+TGG | - | tig0024906:29770-29789 | Msa1421030:intron | 40.0% | |
| !!! | TCCTGGTAGAGGTCTTATTT+TGG | - | tig0024906:29787-29806 | Msa1421030:CDS | 40.0% |
| TCCAAAATAAGACCTCTACC+AGG | + | tig0024906:29791-29810 | None:intergenic | 40.0% | |
| !!! | TAGAGGTCTTATTTTGGAGC+CGG | - | tig0024906:29793-29812 | Msa1421030:CDS | 40.0% |
| ! | TTGAACTAGCTTCAGAGGTT+TGG | - | tig0024906:29834-29853 | Msa1421030:CDS | 40.0% |
| ! | TGAACTAGCTTCAGAGGTTT+GGG | - | tig0024906:29835-29854 | Msa1421030:CDS | 40.0% |
| !! | ACATATGATGGGCTAGATAG+TGG | - | tig0024906:29872-29891 | Msa1421030:CDS | 40.0% |
| TACTTTATGCTCGACTCAAC+AGG | - | tig0024906:29935-29954 | Msa1421030:CDS | 40.0% | |
| ACTTTATGCTCGACTCAACA+GGG | - | tig0024906:29936-29955 | Msa1421030:CDS | 40.0% | |
| !!! | TGTATCGGTTTTCAAGCCTA+TGG | - | tig0024906:29967-29986 | Msa1421030:CDS | 40.0% |
| ACGACAAAGGTAAACCTCTA+GGG | + | tig0024906:30018-30037 | None:intergenic | 40.0% | |
| AACGACAAAGGTAAACCTCT+AGG | + | tig0024906:30019-30038 | None:intergenic | 40.0% | |
| GGTTTACCTTTGTCGTTAGA+CGG | - | tig0024906:30022-30041 | Msa1421030:CDS | 40.0% | |
| AAGCACTTTGCCATAACAGT+CGG | + | tig0024906:30178-30197 | None:intergenic | 40.0% | |
| ! | CAAAGCATTTAACCATCCAG+AGG | - | tig0024906:30201-30220 | Msa1421030:CDS | 40.0% |
| ATTTAACCATCCAGAGGGTT+TGG | - | tig0024906:30207-30226 | Msa1421030:CDS | 40.0% | |
| ATTCTCCACGAACATTTGCA+AGG | + | tig0024906:30248-30267 | None:intergenic | 40.0% | |
| ! | GGAGAATAATGGAAGTTGTG+AGG | - | tig0024906:30261-30280 | Msa1421030:CDS | 40.0% |
| ! | ATTTTATGCACCTCCTTCAC+CGG | + | tig0024906:30307-30326 | None:intergenic | 40.0% |
| GGTGCATAAAATTACTGTGC+TGG | - | tig0024906:30315-30334 | Msa1421030:CDS | 40.0% | |
| TGAGACTTGCAAATGCAGAT+AGG | - | tig0024906:30341-30360 | Msa1421030:CDS | 40.0% | |
| ! | CATGCTGGGAATATTTTGCT+TGG | - | tig0024906:30364-30383 | Msa1421030:CDS | 40.0% |
| CAAAGAGAAGAAAAATGGCC+AGG | - | tig0024906:30387-30406 | Msa1421030:CDS | 40.0% | |
| CAATTGGAATCAAAACAGCC+TGG | + | tig0024906:30408-30427 | None:intergenic | 40.0% | |
| AGGCAGTATCCATGATCAAT+TGG | + | tig0024906:30424-30443 | None:intergenic | 40.0% | |
| GCAAGTCGTTGTAATCATGA+AGG | + | tig0024906:30776-30795 | None:intergenic | 40.0% | |
| ! | GAGAATAGTAGCATCGGAAA+AGG | + | tig0024906:30798-30817 | None:intergenic | 40.0% |
| GTCTTCAAGATTGACAGCTT+TGG | + | tig0024906:30862-30881 | None:intergenic | 40.0% | |
| TTTCTCTTGATGTTTAGGGG+AGG | - | tig0024906:30983-31002 | Msa1421030:CDS | 40.0% | |
| AACTCTAAACCACTCACTCA+AGG | - | tig0024906:31053-31072 | Msa1421030:CDS | 40.0% | |
| AGGCCAATAAAGCCATTCAA+AGG | + | tig0024906:31113-31132 | None:intergenic | 40.0% | |
| ! | TCAATGATCTCTGGAGAGTA+TGG | + | tig0024906:31148-31167 | None:intergenic | 40.0% |
| !! | ATTGCCCTTCTGAAGTTTCA+TGG | - | tig0024906:31199-31218 | Msa1421030:five_prime_UTR | 40.0% |
| CCATCCATGAAACTTCAGAA+GGG | + | tig0024906:31206-31225 | None:intergenic | 40.0% | |
| !! | CCTTCTGAAGTTTCATGGAT+GGG | - | tig0024906:31204-31223 | Msa1421030:five_prime_UTR | 40.0% |
| ! | TCGACCATGCTTCTGAAAAA+AGG | - | tig0024906:31262-31281 | Msa1421030:five_prime_UTR | 40.0% |
| !!! | CACTCCTTTTTTCAGAAGCA+TGG | + | tig0024906:31269-31288 | None:intergenic | 40.0% |
| ! | CATGCTTCTGAAAAAAGGAG+TGG | - | tig0024906:31267-31286 | Msa1421030:five_prime_UTR | 40.0% |
| ! | TGCTTCTGAAAAAAGGAGTG+GGG | - | tig0024906:31269-31288 | Msa1421030:five_prime_UTR | 40.0% |
| TGAAAAAAGGAGTGGGGAAA+GGG | - | tig0024906:31275-31294 | Msa1421030:five_prime_UTR | 40.0% | |
| !! | GGATGCTGTTTCTGAGATTA+TGG | - | tig0024906:31423-31442 | Msa1421030:five_prime_UTR | 40.0% |
| AATTGCTGGTGATCTCATCA+AGG | + | tig0024906:31456-31475 | None:intergenic | 40.0% | |
| GATTCGGAAAAGAAGGGGAA+AGG | + | tig0024906:28638-28657 | None:intergenic | 45.0% | |
| ! | TTAGGTTTGGTCTTCTGGGT+TGG | - | tig0024906:28862-28881 | Msa1421030:CDS | 45.0% |
| CACTCTGAGTCCTGTTTCAA+GGG | - | tig0024906:29073-29092 | Msa1421030:CDS | 45.0% | |
| AGATTCGAAGACAAGTGCAG+TGG | + | tig0024906:29134-29153 | None:intergenic | 45.0% | |
| !! | AAAGTTGGTTTGTAACGGGC+GGG | - | tig0024906:29280-29299 | Msa1421030:intron | 45.0% |
| GGAACAAGTTCTCACACTGA+TGG | + | tig0024906:29396-29415 | None:intergenic | 45.0% | |
| ! | TCAGTGTGAGAACTTGTTCC+GGG | - | tig0024906:29396-29415 | Msa1421030:intron | 45.0% |
| ! | CTGAAAGGTATACTCCTTCC+CGG | + | tig0024906:29417-29436 | None:intergenic | 45.0% |
| GATGCAGAGGAAGGTGATTA+TGG | - | tig0024906:29692-29711 | Msa1421030:intron | 45.0% | |
| ! | AGGAGTATGAAGCCATCGAA+CGG | - | tig0024906:29747-29766 | Msa1421030:intron | 45.0% |
| TCTCGACATAATCCGTTCGA+TGG | + | tig0024906:29762-29781 | None:intergenic | 45.0% | |
| TTCTCCAATCAGATCTGCAG+AGG | - | tig0024906:29898-29917 | Msa1421030:CDS | 45.0% | |
| TCTCCAATCAGATCTGCAGA+GGG | - | tig0024906:29899-29918 | Msa1421030:CDS | 45.0% | |
| CTAGGGTTATTCACAGCCAT+CGG | + | tig0024906:30001-30020 | None:intergenic | 45.0% | |
| ATGGCTGTGAATAACCCTAG+AGG | - | tig0024906:30001-30020 | Msa1421030:CDS | 45.0% | |
| AGACGGTGAGGGCTTAAAAA+AGG | - | tig0024906:30039-30058 | Msa1421030:CDS | 45.0% | |
| GACGGTGAGGGCTTAAAAAA+GGG | - | tig0024906:30040-30059 | Msa1421030:CDS | 45.0% | |
| CATGGCCAAATAATGATCGG+CGG | + | tig0024906:30132-30151 | None:intergenic | 45.0% | |
| CACCAGCAAATCCTTTCTCA+TGG | + | tig0024906:30150-30169 | None:intergenic | 45.0% | |
| TGGTTCCTTGCAAATGTTCG+TGG | - | tig0024906:30240-30259 | Msa1421030:CDS | 45.0% | |
| CAAATGCAGATAGGCATGCT+GGG | - | tig0024906:30350-30369 | Msa1421030:CDS | 45.0% | |
| AAGTGCTTACACTAGTGGGA+AGG | + | tig0024906:30444-30463 | None:intergenic | 45.0% | |
| ! | AATGCTGCTCTGAGCCATTA+TGG | - | tig0024906:30605-30624 | Msa1421030:CDS | 45.0% |
| !! | CCCTTCTGAAGTTTCATGGA+TGG | - | tig0024906:31203-31222 | Msa1421030:five_prime_UTR | 45.0% |
| CCCATCCATGAAACTTCAGA+AGG | + | tig0024906:31207-31226 | None:intergenic | 45.0% | |
| ! | TCAGAAGCATGGTCGAGATT+CGG | + | tig0024906:31258-31277 | None:intergenic | 45.0% |
| CTGAAAAAAGGAGTGGGGAA+AGG | - | tig0024906:31274-31293 | Msa1421030:five_prime_UTR | 45.0% | |
| TCAGGCTTCCAATGGCAAAA+GGG | + | tig0024906:31306-31325 | None:intergenic | 45.0% | |
| ATCAGGCTTCCAATGGCAAA+AGG | + | tig0024906:31307-31326 | None:intergenic | 45.0% | |
| TCAATGATTCTCGGCACATC+AGG | + | tig0024906:31324-31343 | None:intergenic | 45.0% | |
| TGTTCTTCCTGGTACTAGTG+AGG | - | tig0024906:31390-31409 | Msa1421030:five_prime_UTR | 45.0% | |
| AAAGTAGCCTCACTAGTACC+AGG | + | tig0024906:31400-31419 | None:intergenic | 45.0% | |
| !! | GTAATGGGTAATGACTCCCT+TGG | - | tig0024906:31594-31613 | Msa1421030:five_prime_UTR | 45.0% |
| CCTTGAAACAGGACTCAGAG+TGG | + | tig0024906:29075-29094 | None:intergenic | 50.0% | |
| CCACTCTGAGTCCTGTTTCA+AGG | - | tig0024906:29072-29091 | Msa1421030:CDS | 50.0% | |
| ! | TGTGAGAACTTGTTCCGGGA+AGG | - | tig0024906:29400-29419 | Msa1421030:intron | 50.0% |
| ! | CGGGAAGGAGTATACCTTTC+AGG | - | tig0024906:29415-29434 | Msa1421030:intron | 50.0% |
| ! | GTTTGCTGATCCTGAACAGC+AGG | - | tig0024906:29496-29515 | Msa1421030:intron | 50.0% |
| CAGCAGGAGGTTGTGTGTAA+CGG | - | tig0024906:29512-29531 | Msa1421030:intron | 50.0% | |
| AGCAGGAGGTTGTGTGTAAC+GGG | - | tig0024906:29513-29532 | Msa1421030:intron | 50.0% | |
| CAGAGGAAGGTGATTATGGG+AGG | - | tig0024906:29696-29715 | Msa1421030:intron | 50.0% | |
| TCGAGAAATGCTCCTGGTAG+AGG | - | tig0024906:29776-29795 | Msa1421030:intron | 50.0% | |
| GTACCCTCTGCAGATCTGAT+TGG | + | tig0024906:29905-29924 | None:intergenic | 50.0% | |
| ! | ATCAGATCTGCAGAGGGTAC+AGG | - | tig0024906:29905-29924 | Msa1421030:CDS | 50.0% |
| ACCTTTGTCGTTAGACGGTG+AGG | - | tig0024906:30027-30046 | Msa1421030:CDS | 50.0% | |
| CCTTTGTCGTTAGACGGTGA+GGG | - | tig0024906:30028-30047 | Msa1421030:CDS | 50.0% | |
| ! | AAGGGTACAAGAGTTGGCCA+AGG | - | tig0024906:30058-30077 | Msa1421030:CDS | 50.0% |
| AGTTGGCCAAGGAGCTTTCA+GGG | - | tig0024906:30069-30088 | Msa1421030:CDS | 50.0% | |
| CAACTTCCCTGAAAGCTCCT+TGG | + | tig0024906:30078-30097 | None:intergenic | 50.0% | |
| AGTGGCCGCCGATCATTATT+TGG | - | tig0024906:30124-30143 | Msa1421030:CDS | 50.0% | |
| GGCCATGAGAAAGGATTTGC+TGG | - | tig0024906:30145-30164 | Msa1421030:CDS | 50.0% | |
| TGGTGTTCCTCCGACTGTTA+TGG | - | tig0024906:30165-30184 | Msa1421030:CDS | 50.0% | |
| CACTTTGCCATAACAGTCGG+AGG | + | tig0024906:30175-30194 | None:intergenic | 50.0% | |
| AACTTAGCAGCCAAACCCTC+TGG | + | tig0024906:30220-30239 | None:intergenic | 50.0% | |
| GAGGGTTTGGCTGCTAAGTT+TGG | - | tig0024906:30220-30239 | Msa1421030:CDS | 50.0% | |
| AGTTGTGAGGATATGGGACC+TGG | - | tig0024906:30274-30293 | Msa1421030:CDS | 50.0% | |
| ! | TATGGGACCTGGTGCTTTTC+CGG | - | tig0024906:30285-30304 | Msa1421030:CDS | 50.0% |
| GCAAATGCAGATAGGCATGC+TGG | - | tig0024906:30349-30368 | Msa1421030:CDS | 50.0% | |
| CTCTTGATGTTTAGGGGAGG+AGG | - | tig0024906:30986-31005 | Msa1421030:CDS | 50.0% | |
| ! | TGATCTCTGGAGAGTATGGC+TGG | + | tig0024906:31144-31163 | None:intergenic | 50.0% |
| CAGGCTTCCAATGGCAAAAG+GGG | + | tig0024906:31305-31324 | None:intergenic | 50.0% | |
| GCACTCGATTCTGTTCTTCC+TGG | - | tig0024906:31379-31398 | Msa1421030:five_prime_UTR | 50.0% | |
| TGGTGATCTCATCAAGGTGC+TGG | + | tig0024906:31450-31469 | None:intergenic | 50.0% | |
| ! | AAGATAGGAGGAGCGCGTAG+TGG | + | tig0024906:28534-28553 | None:intergenic | 55.0% |
| TCCGATGCGTGTGCTACCTT+CGG | - | tig0024906:29199-29218 | Msa1421030:intron | 55.0% | |
| TCCGAAGGTAGCACACGCAT+CGG | + | tig0024906:29203-29222 | None:intergenic | 55.0% | |
| GCGGAGCAATTCCTTGCTCA+AGG | - | tig0024906:29310-29329 | Msa1421030:intron | 55.0% | |
| TGCTGATCCTGAACAGCAGG+AGG | - | tig0024906:29499-29518 | Msa1421030:intron | 55.0% | |
| CACACAACCTCCTGCTGTTC+AGG | + | tig0024906:29509-29528 | None:intergenic | 55.0% | |
| GCAGGAGGTTGTGTGTAACG+GGG | - | tig0024906:29514-29533 | Msa1421030:intron | 55.0% | |
| ! | AGATCTGCAGAGGGTACAGG+TGG | - | tig0024906:29908-29927 | Msa1421030:CDS | 55.0% |
| ! | GATCTGCAGAGGGTACAGGT+GGG | - | tig0024906:29909-29928 | Msa1421030:CDS | 55.0% |
| ! | ATCTGCAGAGGGTACAGGTG+GGG | - | tig0024906:29910-29929 | Msa1421030:CDS | 55.0% |
| GCCTATGGATGAAGAGCCGA+TGG | - | tig0024906:29982-30001 | Msa1421030:CDS | 55.0% | |
| !! | GCCATCGGCTCTTCATCCAT+AGG | + | tig0024906:29986-30005 | None:intergenic | 55.0% |
| CCCTCACCGTCTAACGACAA+AGG | + | tig0024906:30031-30050 | None:intergenic | 55.0% | |
| GAGTTGGCCAAGGAGCTTTC+AGG | - | tig0024906:30068-30087 | Msa1421030:CDS | 55.0% | |
| AATGATCGGCGGCCACTCAT+TGG | + | tig0024906:30121-30140 | None:intergenic | 55.0% | |
| TAGCAGCCAAACCCTCTGGA+TGG | + | tig0024906:30216-30235 | None:intergenic | 55.0% | |
| ! | ACCTGGTGCTTTTCCGGTGA+AGG | - | tig0024906:30291-30310 | Msa1421030:CDS | 55.0% |
| !! | TCCTTCACCGGAAAAGCACC+AGG | + | tig0024906:30295-30314 | None:intergenic | 55.0% |
| ! | TGGTGCTTTTCCGGTGAAGG+AGG | - | tig0024906:30294-30313 | Msa1421030:CDS | 55.0% |
| TGGTCGAGATTCGGAGAGTG+CGG | + | tig0024906:31249-31268 | None:intergenic | 55.0% | |
| ! | GGGATGACCCCTTTTGCCAT+TGG | - | tig0024906:31295-31314 | Msa1421030:five_prime_UTR | 55.0% |
| TCGGCACATCAGGCTTCCAA+TGG | + | tig0024906:31314-31333 | None:intergenic | 55.0% | |
| GAGTATGGCTGGCGAGCTTG+AGG | + | tig0024906:31133-31152 | None:intergenic | 60.0% | |
| ! | GGTCGAGATTCGGAGAGTGC+GGG | + | tig0024906:31248-31267 | None:intergenic | 60.0% |
| !! | GTAACGGGCGGGAGTTGTCG+CGG | - | tig0024906:29291-29310 | Msa1421030:intron | 65.0% |
| AGAGTGCGGGCGCATTCGAG+TGG | + | tig0024906:31235-31254 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024906 | gene | 28480 | 31750 | 28480 | ID=Msa1421030;Name=Msa1421030 |
| tig0024906 | mRNA | 28480 | 31750 | 28480 | ID=Msa1421030-mRNA-1;Parent=Msa1421030;Name=Msa1421030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=573|1|1|1|1|1|2|264|596 |
| tig0024906 | exon | 28480 | 29133 | 28480 | ID=Msa1421030-mRNA-1:exon:1884;Parent=Msa1421030-mRNA-1 |
| tig0024906 | exon | 29777 | 31750 | 29777 | ID=Msa1421030-mRNA-1:exon:1883;Parent=Msa1421030-mRNA-1 |
| tig0024906 | five_prime_UTR | 31178 | 31750 | 31178 | ID=Msa1421030-mRNA-1:five_prime_utr;Parent=Msa1421030-mRNA-1 |
| tig0024906 | CDS | 29777 | 31177 | 29777 | ID=Msa1421030-mRNA-1:cds;Parent=Msa1421030-mRNA-1 |
| tig0024906 | CDS | 28744 | 29133 | 28744 | ID=Msa1421030-mRNA-1:cds;Parent=Msa1421030-mRNA-1 |
| tig0024906 | three_prime_UTR | 28480 | 28743 | 28480 | ID=Msa1421030-mRNA-1:three_prime_utr;Parent=Msa1421030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
