AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1460220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460220 MtrunA17_Chr3g0140961 90.134 1044 19 4 1 967 302 1338 0.0 1857
Msa1460220 MtrunA17_Chr4g0006401 48.566 558 257 10 380 923 689 1230 3.71e-152 484
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460220 AT1G27595.1 49.896 962 413 19 1 925 304 1233 0.0 786
Msa1460220 AT5G01400.2 44.891 597 286 12 335 922 443 1005 7.85e-146 467
Msa1460220 AT5G01400.3 44.891 597 286 12 335 922 609 1171 3.40e-144 466
Msa1460220 AT5G01400.1 44.040 604 288 13 335 922 603 1172 3.02e-141 458

Find 265 sgRNAs with CRISPR-Local

Find 948 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTATCTGGAGTTTAATTT+TGG 0.082623 tig0040757:+5260 Msa1460220:CDS
TGAATCTGCCTTGAAGATTT+TGG 0.117030 tig0040757:+5158 Msa1460220:CDS
TCAACTCAGTTGCCCGTTTC+AGG 0.136823 tig0040757:+620 Msa1460220:CDS
TCGATGAGCTCGTCAATTTC+TGG 0.151119 tig0040757:+12805 Msa1460220:three_prime_UTR
CAGATTGTATTTGATGTCTA+TGG 0.167560 tig0040757:+7925 Msa1460220:CDS
TCACCTTACTTTCCTGTTCT+TGG 0.168820 tig0040757:-1853 Msa1460220:intergenic
CCCTTCAAGAGCCTCTGTTT+TGG 0.221703 tig0040757:-1594 Msa1460220:intergenic
GATGAAACACTTTGACTTGA+TGG 0.228590 tig0040757:-7734 Msa1460220:intergenic
TCTTCACTCCTTGATGATAT+TGG 0.231628 tig0040757:+4898 Msa1460220:CDS
CCTGCTCAAGCTAATGATTC+TGG 0.246967 tig0040757:+752 Msa1460220:CDS
GTCACCTAATGTTCCTGTTT+TGG 0.269517 tig0040757:+802 Msa1460220:CDS
AACGAACCCTTAATCTTATT+CGG 0.269643 tig0040757:-13231 Msa1460220:intergenic
CGTCAATTTCTGGGGTTTCC+AGG 0.287185 tig0040757:+12815 Msa1460220:three_prime_UTR
GAAAGCCCCGAATAAGATTA+AGG 0.289617 tig0040757:+13224 Msa1460220:three_prime_UTR
AGCTGCATCGCCTGCATTCA+TGG 0.291532 tig0040757:-409 Msa1460220:intergenic
TTTAACACCTGTAGAAGTTT+TGG 0.293440 tig0040757:+10123 Msa1460220:CDS
TTTCCTGTTCTTGGGATAGT+TGG 0.293539 tig0040757:-1844 Msa1460220:intergenic
TTTCAATATAACCTCCGTTT+TGG 0.294625 tig0040757:-8923 Msa1460220:intergenic
GCTTACTTAATCTTGAATTC+AGG 0.306885 tig0040757:+11703 Msa1460220:CDS
CACCTTACTTTCCTGTTCTT+GGG 0.308681 tig0040757:-1852 Msa1460220:intergenic
TATAAGTATTTCAAGAGATT+TGG 0.317861 tig0040757:-897 Msa1460220:intergenic
CTCAAGGCCTTGGTGCTATC+TGG 0.321221 tig0040757:+5247 Msa1460220:CDS
TCCGAAGGCCCTCCAGTTCC+AGG 0.326306 tig0040757:+1554 Msa1460220:CDS
TTTCATGAGAACAATTATTC+AGG 0.327398 tig0040757:+11213 Msa1460220:CDS
CTTTCCAAAACAGGAACATT+AGG 0.327576 tig0040757:-806 Msa1460220:intergenic
TATGGAAGCAAATGCTTCTA+TGG 0.328353 tig0040757:+1634 Msa1460220:CDS
ACGAACCCTTAATCTTATTC+GGG 0.332397 tig0040757:-13230 Msa1460220:intergenic
GAGCCTCTTTCAAGTGCTTA+AGG 0.333661 tig0040757:+12995 Msa1460220:three_prime_UTR
AAAAGAATCCAATACAGTTT+TGG 0.335371 tig0040757:-5082 Msa1460220:intergenic
ACAAATTTCCTCTCCATGAT+TGG 0.335692 tig0040757:+12973 Msa1460220:three_prime_UTR
AAGCATTTGCTTCCATAATC+TGG 0.335851 tig0040757:-1628 Msa1460220:intergenic
TCTGAGTACAGCAAATCTTT+TGG 0.335982 tig0040757:+1694 Msa1460220:CDS
CCATGGCCCAATTGAAAATA+TGG 0.348984 tig0040757:+12782 Msa1460220:three_prime_UTR
AGATCAACTTTAGTTGTTCT+CGG 0.351647 tig0040757:+12638 Msa1460220:intron
GAGCAAATGATTGCCGTTAT+TGG 0.359243 tig0040757:+845 Msa1460220:CDS
CGATGAGCTCGTCAATTTCT+GGG 0.362117 tig0040757:+12806 Msa1460220:three_prime_UTR
ACAGATTCATCCTGATCTAT+TGG 0.362310 tig0040757:+922 Msa1460220:CDS
GCCTGGAGATCACCAGATTA+TGG 0.367221 tig0040757:+1616 Msa1460220:CDS
GTTAGTTCACTTTCCAAAAC+AGG 0.368373 tig0040757:-815 Msa1460220:intergenic
CCTAGGGCCCTCACAAGATT+AGG 0.373469 tig0040757:-8530 Msa1460220:intergenic
ATCAGGATTATCACATCCTT+TGG 0.374165 tig0040757:-13175 Msa1460220:intergenic
ATTGCTAAGCGGATTCGTTC+TGG 0.379417 tig0040757:+707 Msa1460220:CDS
TCCTGGAACTGGAGGGCCTT+CGG 0.385864 tig0040757:-1555 Msa1460220:intergenic
TTGGACGATAATGAAACAAA+TGG 0.385986 tig0040757:+1713 Msa1460220:CDS
TTGGAGAGCGATGACAATAA+TGG 0.386016 tig0040757:-8904 Msa1460220:intergenic
GTTTCAAATGCAGCGCAATC+TGG 0.386915 tig0040757:+5905 Msa1460220:CDS
CCTAATCTTGTGAGGGCCCT+AGG 0.400260 tig0040757:+8530 Msa1460220:CDS
CCGTTTCAGGGGAATCATCT+AGG 0.401592 tig0040757:+633 Msa1460220:CDS
TTTATATGATAACTTTCTCT+TGG 0.403853 tig0040757:+4952 Msa1460220:CDS
CAATGGAAGGTCCACAAGTC+GGG 0.405275 tig0040757:-9762 Msa1460220:intergenic
TATATGAACTATTAATTTGT+GGG 0.405805 tig0040757:-12853 Msa1460220:intergenic
AGTGTTCACTCAGCAGGTTT+TGG 0.406121 tig0040757:+11060 Msa1460220:CDS
TTGGTGGATCAGATATGATA+TGG 0.408462 tig0040757:-8574 Msa1460220:intergenic
AAGGCAGATTCAGGCAGAAA+TGG 0.417681 tig0040757:-5147 Msa1460220:intergenic
ACCCGGTCAGGTCCTGGAAC+TGG 0.417920 tig0040757:-1566 Msa1460220:intergenic
TAGTTGAAGGGACTTGTCCT+TGG 0.419123 tig0040757:-1111 Msa1460220:intergenic
CTAAAAGACTTGTCTGAAGC+TGG 0.419856 tig0040757:-5105 Msa1460220:intergenic
TGCAGGCGATGCAGCTGATC+AGG 0.420261 tig0040757:+416 Msa1460220:CDS
TCCTCATGATAATGAACAAT+TGG 0.422772 tig0040757:+667 Msa1460220:CDS
AAAATCTTCAAGGCAGATTC+AGG 0.423155 tig0040757:-5156 Msa1460220:intergenic
CTCTCAAGCCTTGCTAGTGG+TGG 0.426424 tig0040757:-989 Msa1460220:intergenic
CAAAACCGACAAGGCTGCTT+AGG 0.427110 tig0040757:+5291 Msa1460220:CDS
ACACTCAATAAGCTGCATTC+CGG 0.430580 tig0040757:-12904 Msa1460220:intergenic
GGGTTTCCACGTTAGTTGCC+TGG 0.432242 tig0040757:-12833 Msa1460220:intergenic
CTATTCCTAAGCAGCCTTGT+CGG 0.436197 tig0040757:-5296 Msa1460220:intergenic
ATGCACGCCTTTGATTCAAC+CGG 0.436943 tig0040757:-12936 Msa1460220:intergenic
CTAGATGATTCCCCTGAAAC+GGG 0.438246 tig0040757:-632 Msa1460220:intergenic
ATTAAGTAAGCATACCTGTT+TGG 0.439428 tig0040757:-11691 Msa1460220:intergenic
AGTTGAAGGGACTTGTCCTT+GGG 0.440168 tig0040757:-1110 Msa1460220:intergenic
TGTTCATTATCATGAGGAAC+AGG 0.440624 tig0040757:-662 Msa1460220:intergenic
CCTAGATGATTCCCCTGAAA+CGG 0.442282 tig0040757:-633 Msa1460220:intergenic
TTATATGATAACTTTCTCTT+GGG 0.445147 tig0040757:+4953 Msa1460220:CDS
CTGCTTAGGAATAGCATTGA+AGG 0.446034 tig0040757:+5305 Msa1460220:CDS
GCCTCTGTTCTTTGTTCAGT+AGG 0.446656 tig0040757:-5929 Msa1460220:intergenic
AGCCTGCGAGCCATGAATGC+AGG 0.447801 tig0040757:+399 Msa1460220:CDS
TCCATAATCTGGTGATCTCC+AGG 0.449301 tig0040757:-1617 Msa1460220:intergenic
GGACTAACCCGGTCAGGTCC+TGG 0.449448 tig0040757:-1572 Msa1460220:intergenic
AGTGCAAGGCCATCTTTCTC+AGG 0.449995 tig0040757:-10166 Msa1460220:intergenic
TGTGTAGGCCAAAACTGTAT+TGG 0.450401 tig0040757:+5074 Msa1460220:intron
CTATATGAACTATTAATTTG+TGG 0.452297 tig0040757:-12854 Msa1460220:intergenic
CTCCAGTTCCAGGACCTGAC+CGG 0.456151 tig0040757:+1564 Msa1460220:CDS
TTCTAAACGCGATCCACGCC+GGG 0.458123 tig0040757:+1201 Msa1460220:CDS
CTGCTCAAGCTAATGATTCT+GGG 0.458491 tig0040757:+753 Msa1460220:CDS
CTCAAAACTTGTGACCAAAC+AGG 0.458787 tig0040757:+11677 Msa1460220:CDS
GACAAATTGTTTGAACCAAC+CGG 0.459375 tig0040757:+12885 Msa1460220:three_prime_UTR
TCAAGCCTTGCTAGTGGTGG+GGG 0.459459 tig0040757:-986 Msa1460220:intergenic
AGATTCGAGCTAAAGCTATT+CGG 0.461335 tig0040757:+5702 Msa1460220:CDS
TCTCAAGCCTTGCTAGTGGT+GGG 0.461653 tig0040757:-988 Msa1460220:intergenic
CAACTCAGTTGCCCGTTTCA+GGG 0.461834 tig0040757:+621 Msa1460220:CDS
ATCCCAAGAACAGGAAAGTA+AGG 0.464619 tig0040757:+1850 Msa1460220:CDS
CCCAAAACAGAGGCTCTTGA+AGG 0.465503 tig0040757:+1593 Msa1460220:CDS
ACAGAGGCTCTTGAAGGGCC+TGG 0.465678 tig0040757:+1599 Msa1460220:CDS
CGCCTGCATTCATGGCTCGC+AGG 0.466546 tig0040757:-401 Msa1460220:intergenic
AAATACAATCTGTAGAAGAC+TGG 0.466676 tig0040757:-7914 Msa1460220:intergenic
GATGGTTTAGCAACTCCAGC+AGG 0.468983 tig0040757:-7716 Msa1460220:intergenic
CATCCAACTATCCCAAGAAC+AGG 0.470834 tig0040757:+1841 Msa1460220:CDS
GGTTTCATATAAATGTTTAA+CGG 0.472889 tig0040757:-8766 Msa1460220:intergenic
ATTAGGTGACACTCCGTTAA+CGG 0.476149 tig0040757:-789 Msa1460220:intergenic
TAGATCATCCAAAATCTTCA+AGG 0.477305 tig0040757:-5166 Msa1460220:intergenic
GAGACAAGTACTTCAGTTAG+TGG 0.479172 tig0040757:+12716 Msa1460220:CDS
TCGCTCCACGCCGCGGATCA+AGG 0.479222 tig0040757:-1364 Msa1460220:intergenic
GTAGAAATGGCTGTAGTTGA+AGG 0.479459 tig0040757:-1124 Msa1460220:intergenic
CTTTCTCAGGAACAATTCCA+TGG 0.480402 tig0040757:-10153 Msa1460220:intergenic
TGTTGAACATACTCTAAACT+TGG 0.481993 tig0040757:-8787 Msa1460220:intergenic
CTCAAGCCTTGCTAGTGGTG+GGG 0.483059 tig0040757:-987 Msa1460220:intergenic
TCCATTGGAAAAGTTTCAAA+GGG 0.485257 tig0040757:+9778 Msa1460220:CDS
CCGACTTGTGGACCTTCCAT+TGG 0.485463 tig0040757:+9763 Msa1460220:CDS
CTTGAAAGAGGCTCCAATCA+TGG 0.487486 tig0040757:-12986 Msa1460220:intergenic
AGGGATCATAGCTCCGTTAA+CGG 0.489160 tig0040757:+776 Msa1460220:CDS
GGTGAAGTAAAGTCAGAGTC+AGG 0.489514 tig0040757:-731 Msa1460220:intergenic
TGGGATAGTTGGATGTAAGG+TGG 0.491068 tig0040757:-1833 Msa1460220:intergenic
ACAATATCAGCCAATAGATC+AGG 0.494117 tig0040757:-932 Msa1460220:intergenic
ATATAACCCGGTTGAATCAA+AGG 0.494903 tig0040757:+12929 Msa1460220:three_prime_UTR
TCTTGGGATAGTTGGATGTA+AGG 0.495349 tig0040757:-1836 Msa1460220:intergenic
TGAAGAAGTGGCAGTAGAAA+TGG 0.498255 tig0040757:-1137 Msa1460220:intergenic
TTCCATTGGAAAAGTTTCAA+AGG 0.500358 tig0040757:+9777 Msa1460220:CDS
TTTCCTTAAGCACTTGAAAG+AGG 0.501283 tig0040757:-12998 Msa1460220:intergenic
TGGACGATAATGAAACAAAT+GGG 0.503436 tig0040757:+1714 Msa1460220:CDS
TGAAATAAGTGGTACTTCAC+AGG 0.503811 tig0040757:+7673 Msa1460220:CDS
AAAGCCCCGAATAAGATTAA+GGG 0.504261 tig0040757:+13225 Msa1460220:three_prime_UTR
TCCTTGACTGTTTCTGCCCA+AGG 0.504622 tig0040757:+1094 Msa1460220:CDS
GAAACGGGCAACTGAGTTGA+TGG 0.504802 tig0040757:-617 Msa1460220:intergenic
TCACATGTACCTGTAGTATG+TGG 0.507746 tig0040757:-9808 Msa1460220:intergenic
CGGCGTGGAGCGATAACTCC+TGG 0.508175 tig0040757:+1374 Msa1460220:CDS
AGCAATCAAAGCACCAATAA+CGG 0.508359 tig0040757:-858 Msa1460220:intergenic
GAATCAGTGGAATAGACCCC+GGG 0.508834 tig0040757:-1659 Msa1460220:intergenic
AGATTGTATTTGATGTCTAT+GGG 0.509763 tig0040757:+7926 Msa1460220:CDS
CAAATGCTTCTATGGATCCC+GGG 0.510944 tig0040757:+1642 Msa1460220:CDS
GCAAATGCTTCTATGGATCC+CGG 0.514389 tig0040757:+1641 Msa1460220:CDS
ATACAGTCATGGAAGGAAGC+TGG 0.517612 tig0040757:-13026 Msa1460220:intergenic
ACTGAGACAGCTGCTCCTCC+AGG 0.521413 tig0040757:-1392 Msa1460220:intergenic
ACTTCTACAGGTGTTAAAGC+TGG 0.523467 tig0040757:-10118 Msa1460220:intergenic
ACGTACAGTGTTCACTCAGC+AGG 0.524130 tig0040757:+11054 Msa1460220:CDS
CCAGAATCATTAGCTTGAGC+AGG 0.525338 tig0040757:-752 Msa1460220:intergenic
TTGATTGCTGAAGGAGAAAG+AGG 0.525960 tig0040757:+872 Msa1460220:CDS
CTTGCAACATGATGTGAGGC+AGG 0.526600 tig0040757:-1473 Msa1460220:intergenic
CCAATGGAAGGTCCACAAGT+CGG 0.527158 tig0040757:-9763 Msa1460220:intergenic
GCACGTGTGTTTCATTTGCA+AGG 0.527521 tig0040757:-12661 Msa1460220:intergenic
GACATTGAGCGTGTGACTCA+AGG 0.528515 tig0040757:+5231 Msa1460220:CDS
AGATGGCCTTGCACTTAAGA+AGG 0.529393 tig0040757:+10174 Msa1460220:CDS
AGACAAGTACTTCAGTTAGT+GGG 0.530639 tig0040757:+12717 Msa1460220:CDS
TCCAGTTCCAGGACCTGACC+GGG 0.531512 tig0040757:+1565 Msa1460220:CDS
AGTCAAGAGAAAGACTGATA+AGG 0.531746 tig0040757:+376 None:intergenic
ATCATATCTGATCCACCAAA+AGG 0.532728 tig0040757:+8578 Msa1460220:CDS
TGATAACTTTCTCTTGGGAG+TGG 0.532774 tig0040757:+4958 Msa1460220:CDS
TTCCCTCGTCAGTCAATCGC+AGG 0.533015 tig0040757:+1036 Msa1460220:CDS
AGCCTCAAGAACTGTAAAGC+AGG 0.534912 tig0040757:+7951 Msa1460220:CDS
TGGCAGGGTTCAGCTCATAC+AGG 0.535890 tig0040757:+10094 Msa1460220:intron
CTGAAGTACTTGTCTCAGAA+TGG 0.537201 tig0040757:-12709 Msa1460220:intergenic
GAGCGTGTGACTCAAGGCCT+TGG 0.537403 tig0040757:+5237 Msa1460220:CDS
CTAATCTTGTGAGGGCCCTA+GGG 0.537691 tig0040757:+8531 Msa1460220:CDS
GGGCAGAAACAGTCAAGGAT+TGG 0.538757 tig0040757:-1090 Msa1460220:intergenic
GAGCCCGAAAATGACCCTGC+TGG 0.539115 tig0040757:+7701 Msa1460220:CDS
ATTTGATTGGATATCGTCAT+CGG 0.539400 tig0040757:-1498 Msa1460220:intergenic
GGCCAAGGCATTGAATCAGA+TGG 0.544046 tig0040757:+11081 Msa1460220:CDS
ATTGTCATCGCTCTCCAAAA+CGG 0.545396 tig0040757:+8909 Msa1460220:CDS
CACATCAGAAGATACCTGTC+TGG 0.545422 tig0040757:+1796 Msa1460220:CDS
GACCATCTGATTCAATGCCT+TGG 0.546540 tig0040757:-11083 Msa1460220:intergenic
ATTCAGAATAAGATTGCCCT+AGG 0.547833 tig0040757:-8547 Msa1460220:intergenic
ATTGCAACCAAAACTTCTAC+AGG 0.551712 tig0040757:-10130 Msa1460220:intergenic
ATATCATCAAGGAGTGAAGA+TGG 0.551768 tig0040757:-4895 Msa1460220:intergenic
TACAGTCATGGAAGGAAGCT+GGG 0.552461 tig0040757:-13025 Msa1460220:intergenic
GTCGAAAGTCTTGAAATAAG+TGG 0.553999 tig0040757:+7662 Msa1460220:CDS
TCAATAAGCTGCATTCCGGT+TGG 0.556520 tig0040757:-12900 Msa1460220:intergenic
AGCAATCGCCTCATGACCAT+TGG 0.556542 tig0040757:-690 Msa1460220:intergenic
TAATATGAAGCACCTGCCTA+AGG 0.557879 tig0040757:+961 Msa1460220:CDS
GTAGATATCAAATCAGAAGA+TGG 0.559293 tig0040757:-8744 Msa1460220:intergenic
GAGTCATACAATCATTTGCA+AGG 0.560259 tig0040757:+1902 Msa1460220:CDS
GCCAATTGTTCATTATCATG+AGG 0.562320 tig0040757:-668 Msa1460220:intergenic
GTTACTGAAATTAGATGTGT+CGG 0.562421 tig0040757:-1167 Msa1460220:intergenic
AACTCAGTTGCCCGTTTCAG+GGG 0.563019 tig0040757:+622 Msa1460220:CDS
ACTAGCTAGACTTGTAGCTC+AGG 0.563064 tig0040757:+1955 Msa1460220:CDS
GACCTGCTTTACAGTTCTTG+AGG 0.567519 tig0040757:-7953 Msa1460220:intergenic
TATTGAGTGTTTATATAACC+CGG 0.570239 tig0040757:+12917 Msa1460220:three_prime_UTR
GGAATTGTTCCTGAGAAAGA+TGG 0.570610 tig0040757:+10157 Msa1460220:CDS
AAGCTGTGGCAACTCCAGAC+AGG 0.571466 tig0040757:-1810 Msa1460220:intergenic
GCAGTGTGCTGTTCATCCAC+AGG 0.572150 tig0040757:+5676 Msa1460220:intron
TGACTGACGAGGGAACCTAC+TGG 0.573123 tig0040757:-1028 Msa1460220:intergenic
TGCACGCCTTTGATTCAACC+GGG 0.575697 tig0040757:-12935 Msa1460220:intergenic
CTCATGAAAAGCAGAGGCAG+CGG 0.576352 tig0040757:-11199 Msa1460220:intergenic
CCCTCACAAGATTAGGAATG+TGG 0.576387 tig0040757:-8523 Msa1460220:intergenic
GGATCGCGTTTAGAATCAGC+AGG 0.576862 tig0040757:-1193 Msa1460220:intergenic
AACTATGATACAGTCATGGA+AGG 0.579865 tig0040757:-13033 Msa1460220:intergenic
GGCACTTGCCCACATACTAC+AGG 0.580791 tig0040757:+9799 Msa1460220:CDS
TTGATGATATTGGATTCAGC+AGG 0.582464 tig0040757:+4908 Msa1460220:CDS
AATGGAAGGTCCACAAGTCG+GGG 0.582529 tig0040757:-9761 Msa1460220:intergenic
AACACATTCTGGAAGACCAC+TGG 0.582941 tig0040757:+3712 Msa1460220:CDS
CCTACTGGTCGAGTTACTGA+TGG 0.583497 tig0040757:-1013 Msa1460220:intergenic
TGAATCAGTGGAATAGACCC+CGG 0.583503 tig0040757:-1660 Msa1460220:intergenic
GATGAGCTCGTCAATTTCTG+GGG 0.584009 tig0040757:+12807 Msa1460220:three_prime_UTR
AGTCATACAATCATTTGCAA+GGG 0.584350 tig0040757:+1903 Msa1460220:CDS
ACCCTCGTCGCCTTGATCCG+CGG 0.584850 tig0040757:+1354 Msa1460220:CDS
TCGAGCTAAAGCTATTCGGC+TGG 0.585782 tig0040757:+5706 Msa1460220:CDS
TGCTGAATCCAATATCATCA+AGG 0.585937 tig0040757:-4906 Msa1460220:intergenic
CGCGTTTAGAATCAGCAGGA+AGG 0.587767 tig0040757:-1189 Msa1460220:intergenic
TGACATGATAGTTGATTGAC+TGG 0.587820 tig0040757:+12747 Msa1460220:exon
CAGACAGGTATCTTCTGATG+TGG 0.590500 tig0040757:-1795 Msa1460220:intergenic
GATTGTATGACTCTATTATG+TGG 0.594844 tig0040757:-1892 Msa1460220:intergenic
ATTGGTGCTTTGATTGCTGA+AGG 0.595483 tig0040757:+863 Msa1460220:CDS
CCAAAACAGAGGCTCTTGAA+GGG 0.596755 tig0040757:+1594 Msa1460220:CDS
AAGTGAAAATCTTCTGACAC+TGG 0.597212 tig0040757:+8601 Msa1460220:CDS
TGAACAAAGAACAGAGGCAC+AGG 0.598309 tig0040757:+5934 Msa1460220:CDS
CACATGTACCTGTAGTATGT+GGG 0.598378 tig0040757:-9807 Msa1460220:intergenic
GAGTCACACGCTCAATGTCG+CGG 0.601042 tig0040757:-5227 Msa1460220:intergenic
TAGAAATGGCTGTAGTTGAA+GGG 0.601792 tig0040757:-1123 Msa1460220:intergenic
GGCAGGTTTAATTAAAGACA+CGG 0.605109 tig0040757:-1456 Msa1460220:intergenic
TCAAGGAGTGAAGATGGTAC+AGG 0.605272 tig0040757:-4889 Msa1460220:intergenic
ATTCTAAACGCGATCCACGC+CGG 0.605393 tig0040757:+1200 Msa1460220:CDS
GAAGAGGCACCTTTCGCCAG+TGG 0.606394 tig0040757:-3728 Msa1460220:intergenic
GATAATGAACAATTGGCCAA+TGG 0.606768 tig0040757:+674 Msa1460220:CDS
GGAAAGTGAACTAACTGCTG+TGG 0.606835 tig0040757:+823 Msa1460220:CDS
ATCCTCAGATTCTAAATGTG+TGG 0.606884 tig0040757:-1432 Msa1460220:intergenic
AATACAATCTGTAGAAGACT+GGG 0.607384 tig0040757:-7913 Msa1460220:intergenic
GACGTGCCTTCTTAAGTGCA+AGG 0.607750 tig0040757:-10180 Msa1460220:intergenic
CGTCGCCTTGATCCGCGGCG+TGG 0.608086 tig0040757:+1359 Msa1460220:CDS
CGGTCAGGTCCTGGAACTGG+AGG 0.609144 tig0040757:-1563 Msa1460220:intergenic
CGAACCCTTAATCTTATTCG+GGG 0.610759 tig0040757:-13229 Msa1460220:intergenic
AGACAGGTATCTTCTGATGT+GGG 0.614315 tig0040757:-1794 Msa1460220:intergenic
GCCGCGGATCAAGGCGACGA+GGG 0.615310 tig0040757:-1355 Msa1460220:intergenic
CGCCGCGGATCAAGGCGACG+AGG 0.617936 tig0040757:-1356 Msa1460220:intergenic
TTAGCTCGAATCTCGTCCTG+TGG 0.618171 tig0040757:-5692 Msa1460220:intergenic
GGTCAGGTCCTGGAACTGGA+GGG 0.619993 tig0040757:-1562 Msa1460220:intergenic
GGACTCTCAAGCCTTGCTAG+TGG 0.620299 tig0040757:-992 Msa1460220:intergenic
GGCCACACATTTAGAATCTG+AGG 0.620459 tig0040757:+1430 Msa1460220:CDS
GCCACATTCCTAATCTTGTG+AGG 0.622444 tig0040757:+8522 Msa1460220:CDS
TCCTTGGGCAGAAACAGTCA+AGG 0.622849 tig0040757:-1095 Msa1460220:intergenic
GCATGATCATCATTCTCCAA+AGG 0.626262 tig0040757:+13159 Msa1460220:three_prime_UTR
GGGTTTCCAGGCAACTAACG+TGG 0.629794 tig0040757:+12827 Msa1460220:three_prime_UTR
CCACATTCCTAATCTTGTGA+GGG 0.630440 tig0040757:+8523 Msa1460220:CDS
AATGATGACATGATCTCCGA+AGG 0.631648 tig0040757:+1539 Msa1460220:CDS
CAGTGCAGGAAAAGCATCAA+CGG 0.632576 tig0040757:-11236 Msa1460220:intergenic
TCTGGAAGACCACTGGCGAA+AGG 0.633937 tig0040757:+3719 Msa1460220:CDS
TCAAGCTAATGATTCTGGGA+GGG 0.637668 tig0040757:+757 Msa1460220:CDS
TCTGATGTTGTTGATCACGA+TGG 0.637701 tig0040757:+5195 Msa1460220:CDS
ACAATTGGCCAATGGTCATG+AGG 0.638167 tig0040757:+682 Msa1460220:CDS
ATTGTTCTCATGAAAAGCAG+AGG 0.639629 tig0040757:-11205 Msa1460220:intergenic
ATGGTTTAGCAACTCCAGCA+GGG 0.643234 tig0040757:-7715 Msa1460220:intergenic
GTCATACAATCATTTGCAAG+GGG 0.647195 tig0040757:+1904 Msa1460220:CDS
GCAGGTTTAATTAAAGACAC+GGG 0.650053 tig0040757:-1455 Msa1460220:intergenic
GACAAGTACTTCAGTTAGTG+GGG 0.655504 tig0040757:+12718 Msa1460220:CDS
GCTACAAGTCTAGCTAGTAG+TGG 0.657649 tig0040757:-1950 Msa1460220:intergenic
CTCAAGCTAATGATTCTGGG+AGG 0.658217 tig0040757:+756 Msa1460220:CDS
CCATCAGTAACTCGACCAGT+AGG 0.659750 tig0040757:+1013 Msa1460220:CDS
GTCGGATGGTGATGAAGAAG+TGG 0.659874 tig0040757:-1149 Msa1460220:intergenic
AAATGCTTCTATGGATCCCG+GGG 0.662782 tig0040757:+1643 Msa1460220:CDS
ATGGAAGGTCCACAAGTCGG+GGG 0.665364 tig0040757:-9760 Msa1460220:intergenic
TGGATGTAAGGTGGAAGCTG+TGG 0.670408 tig0040757:-1824 Msa1460220:intergenic
GGAGTTATCGCTCCACGCCG+CGG 0.671224 tig0040757:-1371 Msa1460220:intergenic
CTCAGTTACAGACGATACTG+CGG 0.672588 tig0040757:+1409 Msa1460220:CDS
AAGAGGCTCCAATCATGGAG+AGG 0.676088 tig0040757:-12981 Msa1460220:intergenic
AACCTGCGATTGACTGACGA+GGG 0.678494 tig0040757:-1038 Msa1460220:intergenic
GGAAAGTAAGGTGAAACACA+TGG 0.681435 tig0040757:+1862 Msa1460220:CDS
TCAGAATGGTGCAATGATGT+CGG 0.681746 tig0040757:-12695 Msa1460220:intergenic
TTCAGAATAAGATTGCCCTA+GGG 0.684942 tig0040757:-8546 Msa1460220:intergenic
GTCATGAGGCGATTGCTAAG+CGG 0.685793 tig0040757:+696 Msa1460220:CDS
CCGGGTTAGTCCCAAAACAG+AGG 0.687849 tig0040757:+1583 Msa1460220:CDS
TAACCTGCGATTGACTGACG+AGG 0.689561 tig0040757:-1039 Msa1460220:intergenic
CTGAAATTAGATGTGTCGGA+TGG 0.697435 tig0040757:-1163 Msa1460220:intergenic
GTCATCGCTCTCCAAAACGG+AGG 0.705973 tig0040757:+8912 Msa1460220:CDS
AGTCATGGAAGGAAGCTGGG+TGG 0.707944 tig0040757:-13022 Msa1460220:intergenic
GGTCGTCCACAAAACCGACA+AGG 0.708994 tig0040757:+5282 Msa1460220:CDS
ACCTACTGAACAAAGAACAG+AGG 0.712884 tig0040757:+5928 Msa1460220:CDS
CGTGGAGCGATAACTCCTGG+AGG 0.732925 tig0040757:+1377 Msa1460220:CDS
GGTGCTTGCAACATGATGTG+AGG 0.741811 tig0040757:-1477 None:intergenic
TTAAACTCCAGATAGCACCA+AGG 0.762201 tig0040757:-5254 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATATGAAAATATTAAA+TGG - tig0040757:1288-1307 Msa1460220:intergenic 10.0%
!! ACATTAAAATATTTAAAAAC+CGG + tig0040757:2430-2449 Msa1460220:intron 10.0%
!!! TTATTATTATGTAATTTGTT+TGG + tig0040757:3217-3236 Msa1460220:intron 10.0%
!! AATTAAAAATACAAAAGATA+AGG + tig0040757:4051-4070 Msa1460220:intron 10.0%
!! AAGAATTAAAAAAAAAATAG+TGG + tig0040757:4653-4672 Msa1460220:intron 10.0%
!!! ATATATTTTCAAGTTTTATA+GGG - tig0040757:7350-7369 Msa1460220:intergenic 10.0%
!!! AATATATTTTCAAGTTTTAT+AGG - tig0040757:7351-7370 Msa1460220:intergenic 10.0%
!! GAAAATTAAATAGTTATAAT+TGG - tig0040757:8396-8415 Msa1460220:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - tig0040757:10793-10812 Msa1460220:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - tig0040757:10794-10813 Msa1460220:intergenic 10.0%
!!! TAAATTTGTTTTTCAATTTT+GGG + tig0040757:11260-11279 Msa1460220:intron 10.0%
!! AACCATATTGAATAAATAAA+CGG - tig0040757:576-595 Msa1460220:intergenic 15.0%
!!! TTTTGATTGTTAAATTTGAT+TGG - tig0040757:1514-1533 Msa1460220:intergenic 15.0%
!!! ATTTATATGTTTTACATATG+TGG + tig0040757:2056-2075 Msa1460220:intron 15.0%
!! TAATTAAAATGATGTAGAAA+AGG - tig0040757:3260-3279 Msa1460220:intergenic 15.0%
!!! AGCATTATCATTTATTATTT+TGG + tig0040757:3639-3658 Msa1460220:intron 15.0%
!!! TTTTATTTATATTTTCAACG+AGG + tig0040757:3783-3802 Msa1460220:intron 15.0%
!! ATAATGATAATCAAACTAAT+GGG - tig0040757:3851-3870 Msa1460220:intergenic 15.0%
!! TATAATGATAATCAAACTAA+TGG - tig0040757:3852-3871 Msa1460220:intergenic 15.0%
!! CATATAATTAAAAATTGACA+AGG - tig0040757:4082-4101 Msa1460220:intergenic 15.0%
!! ACAATTAATGATAAAATCAA+GGG - tig0040757:4390-4409 Msa1460220:intergenic 15.0%
!! AACAATTAATGATAAAATCA+AGG - tig0040757:4391-4410 Msa1460220:intergenic 15.0%
!! AAATCTTTATTCAAAATCTT+TGG - tig0040757:4507-4526 Msa1460220:intergenic 15.0%
!!! AAAGATTTTGAATAAAGATT+TGG + tig0040757:4506-4525 Msa1460220:intron 15.0%
!!! TTTTTATGTCATTTAACATA+AGG + tig0040757:5021-5040 Msa1460220:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - tig0040757:6936-6955 Msa1460220:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + tig0040757:6935-6954 Msa1460220:intron 15.0%
!!! TATATTTTCAAGTTTTATAG+GGG - tig0040757:7349-7368 Msa1460220:intergenic 15.0%
!!! TCTAATTTTATTTATCCTAT+TGG - tig0040757:8217-8236 Msa1460220:intergenic 15.0%
!! TAACAATAATGTAAATCAAA+AGG - tig0040757:8967-8986 Msa1460220:intergenic 15.0%
!!! ACTTATTAATCTAACATTTT+CGG - tig0040757:9377-9396 Msa1460220:intergenic 15.0%
!! TGAAAAATTTGATTAAATCA+GGG - tig0040757:10597-10616 Msa1460220:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - tig0040757:10792-10811 Msa1460220:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG + tig0040757:10829-10848 Msa1460220:intron 15.0%
!!! ACCTGAATTTTTTAAAAATA+AGG - tig0040757:11169-11188 Msa1460220:intergenic 15.0%
!!! GTAAATTTGTTTTTCAATTT+TGG + tig0040757:11259-11278 Msa1460220:intron 15.0%
!!! ACATTTTTTGTTTAATATGA+AGG + tig0040757:12175-12194 Msa1460220:intron 15.0%
!!! TAATAATTTTGTAACTGTTA+CGG + tig0040757:12267-12286 Msa1460220:intron 15.0%
!!! TATATGAACTATTAATTTGT+GGG - tig0040757:12856-12875 Msa1460220:intergenic 15.0%
!! ACCATATTGAATAAATAAAC+GGG - tig0040757:575-594 Msa1460220:intergenic 20.0%
!!! CAATATGGTTTTTAATTTTC+AGG + tig0040757:586-605 Msa1460220:intron 20.0%
!! TATAAGTATTTCAAGAGATT+TGG - tig0040757:900-919 Msa1460220:intergenic 20.0%
!! GGAAACAATTTAAATATTGA+TGG - tig0040757:2086-2105 Msa1460220:intergenic 20.0%
!! ATACTAAATAACTAAACTTC+AGG - tig0040757:2112-2131 Msa1460220:intergenic 20.0%
!! TTAAAATATTTAAAAACCGG+TGG + tig0040757:2433-2452 Msa1460220:intron 20.0%
!! AGTGGTTATATATATTGTTA+TGG + tig0040757:2655-2674 Msa1460220:intron 20.0%
!! GTGGTTATATATATTGTTAT+GGG + tig0040757:2656-2675 Msa1460220:intron 20.0%
!! TGGTTATATATATTGTTATG+GGG + tig0040757:2657-2676 Msa1460220:intron 20.0%
!! ATAATCACACAAAATTACAA+CGG - tig0040757:3055-3074 Msa1460220:intergenic 20.0%
!!! TTGTAATTTTGTGTGATTAT+TGG + tig0040757:3055-3074 Msa1460220:intron 20.0%
!!! TTTAATTATTTTTGCCTTTC+CGG + tig0040757:3272-3291 Msa1460220:intron 20.0%
!! TAATGATAATCAAACTAATG+GGG - tig0040757:3850-3869 Msa1460220:intergenic 20.0%
!! TTCTATTAGATGATAATAAG+TGG + tig0040757:4178-4197 Msa1460220:intron 20.0%
!!! TATTTTTGTTTCAAGACAAA+GGG - tig0040757:4470-4489 Msa1460220:intergenic 20.0%
!!! TTATTTTTGTTTCAAGACAA+AGG - tig0040757:4471-4490 Msa1460220:intergenic 20.0%
!!! TTTTGAATAAAGATTTGGAA+TGG + tig0040757:4511-4530 Msa1460220:intron 20.0%
!! ATGAATTACATATATGATGT+TGG + tig0040757:4585-4604 Msa1460220:intron 20.0%
!! TGAATTACATATATGATGTT+GGG + tig0040757:4586-4605 Msa1460220:intron 20.0%
!! ACATTATGTATAATGAAAAC+TGG + tig0040757:4611-4630 Msa1460220:intron 20.0%
!! ATTAAAAAAAAAATAGTGGC+TGG + tig0040757:4657-4676 Msa1460220:intron 20.0%
!! TTTATATGATAACTTTCTCT+TGG + tig0040757:4952-4971 Msa1460220:CDS 20.0%
!! TTATATGATAACTTTCTCTT+GGG + tig0040757:4953-4972 Msa1460220:CDS 20.0%
!! AACAAATTAATCATCAATCA+GGG - tig0040757:5399-5418 Msa1460220:intergenic 20.0%
!! ACAAATAACAGTTTAAATAG+TGG - tig0040757:5563-5582 Msa1460220:intergenic 20.0%
!! TTTAATCTGTTAAATTACCA+TGG + tig0040757:5654-5673 Msa1460220:intron 20.0%
!!! TGTAAACTTGTACTATTTTT+AGG + tig0040757:5957-5976 Msa1460220:intron 20.0%
!!! TGATTACTTTTAATCTGTTT+CGG + tig0040757:7857-7876 Msa1460220:intron 20.0%
!! TATTTAATATCTCTGTCTAT+GGG + tig0040757:8140-8159 Msa1460220:intron 20.0%
!!! TAATGTTGTTATTTTCTTGA+AGG + tig0040757:8692-8711 Msa1460220:intron 20.0%
!! GGTTTCATATAAATGTTTAA+CGG - tig0040757:8769-8788 Msa1460220:intergenic 20.0%
!!! TGTTTGTTTTCTTATTATTC+TGG + tig0040757:8850-8869 Msa1460220:intron 20.0%
!! AATCAAAAGGAATAAAATGA+AGG - tig0040757:8954-8973 Msa1460220:intergenic 20.0%
!! AAATTGATCACAAAATGTTT+AGG + tig0040757:9223-9242 Msa1460220:intron 20.0%
!!! AAGTAACTTCTTTTTTAGAA+AGG + tig0040757:10277-10296 Msa1460220:intron 20.0%
!! CTGAAAAATTTGATTAAATC+AGG - tig0040757:10598-10617 Msa1460220:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - tig0040757:10659-10678 Msa1460220:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - tig0040757:10695-10714 Msa1460220:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - tig0040757:10696-10715 Msa1460220:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - tig0040757:10769-10788 Msa1460220:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + tig0040757:10828-10847 Msa1460220:intron 20.0%
!!! GCCTTATTTTTAAAAAATTC+AGG + tig0040757:11165-11184 Msa1460220:intron 20.0%
!!! TACTTTTATAAGATATTCCA+AGG - tig0040757:11416-11435 Msa1460220:intergenic 20.0%
!!! TTTTTTGTTTAATATGAAGG+AGG + tig0040757:12178-12197 Msa1460220:intron 20.0%
!!! CTATATGAACTATTAATTTG+TGG - tig0040757:12857-12876 Msa1460220:intergenic 20.0%
!! AGGTAAAAATACATCAAAAT+TGG - tig0040757:13099-13118 Msa1460220:intergenic 20.0%
!!! TGATGTATTTTTACCTTTTT+TGG + tig0040757:13103-13122 Msa1460220:three_prime_UTR 20.0%
! CCATATTGAATAAATAAACG+GGG - tig0040757:574-593 Msa1460220:intergenic 25.0%
! CCAGTTATATAAATATCAAC+TGG - tig0040757:1259-1278 Msa1460220:intergenic 25.0%
!! CCAGTTGATATTTATATAAC+TGG + tig0040757:1256-1275 Msa1460220:intron 25.0%
!! CATTGAACTTCAAATTTTTC+AGG + tig0040757:1331-1350 Msa1460220:intron 25.0%
! CCTCAAATATCATTAATTCT+TGG - tig0040757:2010-2029 Msa1460220:intergenic 25.0%
! CCAAGAATTAATGATATTTG+AGG + tig0040757:2007-2026 Msa1460220:intron 25.0%
!! CATTTGATTTCTTATGGTTA+AGG - tig0040757:2162-2181 Msa1460220:intergenic 25.0%
! CTTAACCATAAGAAATCAAA+TGG + tig0040757:2160-2179 Msa1460220:intron 25.0%
!! TTGTACCATTTGATTTCTTA+TGG - tig0040757:2168-2187 Msa1460220:intergenic 25.0%
!! CATTTGTTTGATAACCTTTA+GGG - tig0040757:2379-2398 Msa1460220:intergenic 25.0%
!! ACATTTGTTTGATAACCTTT+AGG - tig0040757:2380-2399 Msa1460220:intergenic 25.0%
! TGTGTTCGTAAATATATGTT+TGG + tig0040757:2405-2424 Msa1460220:intron 25.0%
!!! TATTCTATTCTAGAATGAAG+TGG + tig0040757:2637-2656 Msa1460220:intron 25.0%
! AGATTACTAAGATAATGAGA+TGG + tig0040757:2999-3018 Msa1460220:intron 25.0%
! GATTACTAAGATAATGAGAT+GGG + tig0040757:3000-3019 Msa1460220:intron 25.0%
! ATTACTAAGATAATGAGATG+GGG + tig0040757:3001-3020 Msa1460220:intron 25.0%
!!! ATGCATTTCATTTTTTCTTC+CGG - tig0040757:3294-3313 Msa1460220:intergenic 25.0%
! GAAAAAATGAAATGCATATG+CGG + tig0040757:3297-3316 Msa1460220:intron 25.0%
!!! GTTTTTGCTACTTAAAGTTT+AGG + tig0040757:3324-3343 Msa1460220:intron 25.0%
! TACTTAAAGTTTAGGTGATT+TGG + tig0040757:3332-3351 Msa1460220:intron 25.0%
! ACTTAAAGTTTAGGTGATTT+GGG + tig0040757:3333-3352 Msa1460220:intron 25.0%
!! AAATATATTTCTACCAACAG+AGG - tig0040757:3488-3507 Msa1460220:intergenic 25.0%
!!! GTGTTTTTTTACCCATTTAT+TGG + tig0040757:4103-4122 Msa1460220:intron 25.0%
! GAATTACATATATGATGTTG+GGG + tig0040757:4587-4606 Msa1460220:intron 25.0%
! TCTAAAAATATTACCCTCTT+TGG + tig0040757:4789-4808 Msa1460220:intron 25.0%
! AGAAATTAATGAACCAAAGA+GGG - tig0040757:4805-4824 Msa1460220:intergenic 25.0%
! AAGAAATTAATGAACCAAAG+AGG - tig0040757:4806-4825 Msa1460220:intergenic 25.0%
!!! TTACTTGCTAATGAATTTTC+AGG + tig0040757:4844-4863 Msa1460220:intron 25.0%
!!! TACTTGCTAATGAATTTTCA+GGG + tig0040757:4845-4864 Msa1460220:intron 25.0%
!! AAAAGAATCCAATACAGTTT+TGG - tig0040757:5085-5104 Msa1460220:intergenic 25.0%
! CAACAAATTAATCATCAATC+AGG - tig0040757:5400-5419 Msa1460220:intergenic 25.0%
!! GTGTACATGTTTTATAAACT+TGG + tig0040757:5434-5453 Msa1460220:intron 25.0%
!! GTTTTCCTTTTCCAATTATT+TGG + tig0040757:5456-5475 Msa1460220:intron 25.0%
! TATATATCGGACCAAATAAT+TGG - tig0040757:5470-5489 Msa1460220:intergenic 25.0%
! ATTTGATATTGTACAACAAG+AGG - tig0040757:5744-5763 Msa1460220:intergenic 25.0%
! AAAAGACAAAAGAAAAGAGA+AGG - tig0040757:5983-6002 Msa1460220:intergenic 25.0%
!!! AGTTTTATCTCATTCAATGT+GGG - tig0040757:6064-6083 Msa1460220:intergenic 25.0%
!!! AAGTTTTATCTCATTCAATG+TGG - tig0040757:6065-6084 Msa1460220:intergenic 25.0%
! TTTATGATAGAACATTATGG+CGG - tig0040757:6151-6170 Msa1460220:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - tig0040757:6154-6173 Msa1460220:intergenic 25.0%
! GTTCTATCATAAACCAAATT+TGG + tig0040757:6158-6177 Msa1460220:intron 25.0%
! TAGAAAAGATTTAGATGAGT+TGG - tig0040757:6186-6205 Msa1460220:intergenic 25.0%
!! CTCATCTAAATCTTTTCTAA+TGG + tig0040757:6187-6206 Msa1460220:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - tig0040757:6334-6353 Msa1460220:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + tig0040757:6942-6961 Msa1460220:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + tig0040757:6943-6962 Msa1460220:intron 25.0%
! TATTGTTATGGGAAAATCTA+CGG + tig0040757:6985-7004 Msa1460220:intron 25.0%
!!! ACACTTAGTTTTCATTGATT+TGG - tig0040757:7149-7168 Msa1460220:intergenic 25.0%
!!! CCATCTTAAGTTTTATGATT+TGG - tig0040757:7442-7461 Msa1460220:intergenic 25.0%
! CCAAATCATAAAACTTAAGA+TGG + tig0040757:7439-7458 Msa1460220:intron 25.0%
! GAGCAAAAAATAAAGAAATG+AGG - tig0040757:7784-7803 Msa1460220:intergenic 25.0%
!!! ATTTTTTGCTCTATGTACAA+AGG + tig0040757:7793-7812 Msa1460220:CDS 25.0%
! AGATTGTATTTGATGTCTAT+GGG + tig0040757:7926-7945 Msa1460220:CDS 25.0%
! CTATTTAATATCTCTGTCTA+TGG + tig0040757:8139-8158 Msa1460220:intron 25.0%
! TAAATAGTTATAATTGGGTG+TGG - tig0040757:8390-8409 Msa1460220:intergenic 25.0%
!!! GAAAATTTAGCATTGCTTTT+AGG - tig0040757:8813-8832 Msa1460220:intergenic 25.0%
! ATATGTGAAAAAAAGTTGCA+CGG - tig0040757:9081-9100 Msa1460220:intergenic 25.0%
!!! TTTTAGTTAGTTCTCTGTAT+AGG + tig0040757:9328-9347 Msa1460220:intron 25.0%
! AAATAAAACATGCTTACTGT+AGG - tig0040757:9523-9542 Msa1460220:intergenic 25.0%
!! CATAAATCAGTTTCCTTTTT+GGG + tig0040757:9924-9943 Msa1460220:intron 25.0%
! TGAACAGAGTGAAATTATAA+CGG + tig0040757:9979-9998 Msa1460220:intron 25.0%
! TAAGTATTCTAAGCTATTCA+TGG + tig0040757:10074-10093 Msa1460220:intron 25.0%
! AATCAGAACTCGAAAAATAT+CGG - tig0040757:10223-10242 Msa1460220:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - tig0040757:10660-10679 Msa1460220:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - tig0040757:10770-10789 Msa1460220:intergenic 25.0%
!!! ATGTTTTGAAAGGTTTTCAA+TGG - tig0040757:10966-10985 Msa1460220:intergenic 25.0%
! AATAAGGCAAAAATCAATCA+AGG - tig0040757:11153-11172 Msa1460220:intergenic 25.0%
! TTTCATGAGAACAATTATTC+AGG + tig0040757:11213-11232 Msa1460220:CDS 25.0%
!!! ATAGTTTTAATGTGCTATCT+AGG + tig0040757:11632-11651 Msa1460220:intron 25.0%
! AATAATACATGAAAAGAACG+TGG - tig0040757:11839-11858 Msa1460220:intergenic 25.0%
!! TTCTTTTCATGTATTATTGC+AGG + tig0040757:11841-11860 Msa1460220:intron 25.0%
! TCTTGTTCATTATTGTGATA+TGG + tig0040757:11871-11890 Msa1460220:intron 25.0%
!!! TGAATTTTGAGTATTTGATC+AGG + tig0040757:12220-12239 Msa1460220:intron 25.0%
!!! GAATTTTGAGTATTTGATCA+GGG + tig0040757:12221-12240 Msa1460220:intron 25.0%
! TATTCCTCAGCTAATAAAAT+AGG + tig0040757:12398-12417 Msa1460220:intron 25.0%
!! TTAACCTATTTTATTAGCTG+AGG - tig0040757:12405-12424 Msa1460220:intergenic 25.0%
!!! GTGATTTGATCACAATTTTT+TGG + tig0040757:12436-12455 Msa1460220:intron 25.0%
! TATTGAGTGTTTATATAACC+CGG + tig0040757:12917-12936 Msa1460220:three_prime_UTR 25.0%
! AAAAAACTATGATACAGTCA+TGG - tig0040757:13040-13059 Msa1460220:intergenic 25.0%
!!! ACTGTATCATAGTTTTTTGT+GGG + tig0040757:13042-13061 Msa1460220:three_prime_UTR 25.0%
CCCCGTTTATTTATTCAATA+TGG + tig0040757:571-590 Msa1460220:intron 30.0%
! TCCTCATGATAATGAACAAT+TGG + tig0040757:667-686 Msa1460220:CDS 30.0%
GTTACTGAAATTAGATGTGT+CGG - tig0040757:1170-1189 Msa1460220:intergenic 30.0%
! AAAATCAAGCAGATTTTACC+CGG - tig0040757:1222-1241 Msa1460220:intergenic 30.0%
! TGCTTGATTTTTGCAAGAAT+CGG + tig0040757:1231-1250 Msa1460220:intron 30.0%
GAAGTTCAATGAAACTCAAT+TGG - tig0040757:1322-1341 Msa1460220:intergenic 30.0%
ATTTGATTGGATATCGTCAT+CGG - tig0040757:1501-1520 Msa1460220:intergenic 30.0%
! ATTCTCATCTTTTGAATCAG+TGG - tig0040757:1675-1694 Msa1460220:intergenic 30.0%
TTGGACGATAATGAAACAAA+TGG + tig0040757:1713-1732 Msa1460220:CDS 30.0%
TGGACGATAATGAAACAAAT+GGG + tig0040757:1714-1733 Msa1460220:CDS 30.0%
GATTGTATGACTCTATTATG+TGG - tig0040757:1895-1914 Msa1460220:intergenic 30.0%
AGTCATACAATCATTTGCAA+GGG + tig0040757:1903-1922 Msa1460220:CDS 30.0%
AAATAACTAAACTTCAGGAG+AGG - tig0040757:2107-2126 Msa1460220:intergenic 30.0%
TTAAGGCAATTGACTGTATA+TGG - tig0040757:2145-2164 Msa1460220:intergenic 30.0%
TTCTTAACGCATACTAACTT+TGG - tig0040757:2274-2293 Msa1460220:intergenic 30.0%
CCATTCTTATCTTTATGACT+CGG - tig0040757:2313-2332 Msa1460220:intergenic 30.0%
! ATAAGAATGGTAGTGTGATT+AGG + tig0040757:2323-2342 Msa1460220:intron 30.0%
TGTTGTGTAATAAACCCTAA+AGG + tig0040757:2362-2381 Msa1460220:intron 30.0%
TTGATTACTCAATCTTGCAA+TGG + tig0040757:2458-2477 Msa1460220:intron 30.0%
ACAAACCAAAACATTCCTTT+GGG - tig0040757:2492-2511 Msa1460220:intergenic 30.0%
GATTCATTAACACAAAGCAT+CGG + tig0040757:2525-2544 Msa1460220:intron 30.0%
! ATTCATTAACACAAAGCATC+GGG + tig0040757:2526-2545 Msa1460220:intron 30.0%
! ATGTTATGATTTGTGTGTGA+TGG + tig0040757:2587-2606 Msa1460220:intron 30.0%
GTTGCAATTAAGTAATGAGT+GGG + tig0040757:2791-2810 Msa1460220:intron 30.0%
TTGCAATTAAGTAATGAGTG+GGG + tig0040757:2792-2811 Msa1460220:intron 30.0%
TAGGTATGCTTTCAAAACAA+TGG - tig0040757:2961-2980 Msa1460220:intergenic 30.0%
TGACTGAAGTTTCAAAAACT+AGG - tig0040757:2980-2999 Msa1460220:intergenic 30.0%
ACTGTAATAACTAATACGAC+AGG - tig0040757:3084-3103 Msa1460220:intergenic 30.0%
! ACAGTTTAAGCTTTATCTTG+CGG + tig0040757:3099-3118 Msa1460220:intron 30.0%
!!! TTTCATTTTTTCTTCCGGAA+AGG - tig0040757:3289-3308 Msa1460220:intergenic 30.0%
TGATTAAAGTGATTTCCTTG+TGG - tig0040757:3594-3613 Msa1460220:intergenic 30.0%
TACATTTCACTCTCTTCAAT+AGG + tig0040757:3870-3889 Msa1460220:intron 30.0%
ACATTTCACTCTCTTCAATA+GGG + tig0040757:3871-3890 Msa1460220:intron 30.0%
AAATTATGCGCAATTCTGTT+TGG - tig0040757:3929-3948 Msa1460220:intergenic 30.0%
! TTGCGCATAATTTTGCATTA+TGG + tig0040757:3936-3955 Msa1460220:intron 30.0%
GCATTATGGATCCAAAAATT+TGG + tig0040757:3950-3969 Msa1460220:intron 30.0%
ATCCAAAAATTTGGACTACT+TGG + tig0040757:3959-3978 Msa1460220:intron 30.0%
ATAAATCAACGTCCCATAAA+AGG - tig0040757:4030-4049 Msa1460220:intergenic 30.0%
! TTTTACCCATTTATTGGAAG+AGG + tig0040757:4109-4128 Msa1460220:intron 30.0%
TTAAGCCTCTTCCAATAAAT+GGG - tig0040757:4117-4136 Msa1460220:intergenic 30.0%
TTTAAGCCTCTTCCAATAAA+TGG - tig0040757:4118-4137 Msa1460220:intergenic 30.0%
! GTGTATGATGGTATATTTTG+TGG + tig0040757:4140-4159 Msa1460220:intron 30.0%
CAAAAACCTTAAACTACCAA+AGG - tig0040757:4319-4338 Msa1460220:intergenic 30.0%
GCAAAGATCATAAATACAGT+TGG + tig0040757:4432-4451 Msa1460220:intron 30.0%
!! CTAACTTGTTAGTTTCATGT+TGG + tig0040757:4757-4776 Msa1460220:intron 30.0%
!! ACTTGCTAATGAATTTTCAG+GGG + tig0040757:4846-4865 Msa1460220:intron 30.0%
TATGCTCATAAATGATTGCT+TGG + tig0040757:4981-5000 Msa1460220:intron 30.0%
ATGCTCATAAATGATTGCTT+GGG + tig0040757:4982-5001 Msa1460220:intron 30.0%
! AAGTCTTTTAGCAAACTTCT+TGG + tig0040757:5117-5136 Msa1460220:CDS 30.0%
TAGATCATCCAAAATCTTCA+AGG - tig0040757:5169-5188 Msa1460220:intergenic 30.0%
!! TGCTATCTGGAGTTTAATTT+TGG + tig0040757:5260-5279 Msa1460220:CDS 30.0%
!! GCTATCTGGAGTTTAATTTT+GGG + tig0040757:5261-5280 Msa1460220:CDS 30.0%
AACACAAGCAAAAATGAAGT+TGG - tig0040757:5789-5808 Msa1460220:intergenic 30.0%
!! AACTTCATTTTTGCTTGTGT+TGG + tig0040757:5788-5807 Msa1460220:intron 30.0%
! GTTTCTCTAATAGTTTTCCT+AGG + tig0040757:6209-6228 Msa1460220:intron 30.0%
AAAATAGGCTTAGATGGTTT+GGG - tig0040757:6319-6338 Msa1460220:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + tig0040757:6338-6357 Msa1460220:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - tig0040757:6670-6689 Msa1460220:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + tig0040757:6673-6692 Msa1460220:intron 30.0%
! GTAGATTTTCCCATAACAAT+AGG - tig0040757:6986-7005 Msa1460220:intergenic 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - tig0040757:7143-7162 Msa1460220:intergenic 30.0%
CTAACTCATTCGTACAAAAT+CGG - tig0040757:7418-7437 Msa1460220:intergenic 30.0%
! GGAATGTATTTCTGTTCAAT+AGG - tig0040757:7482-7501 Msa1460220:intergenic 30.0%
! AGTGGCTTATTAAACTTTTC+AGG + tig0040757:7640-7659 Msa1460220:intron 30.0%
! TTCATCTATATCGTTTTCTG+AGG + tig0040757:7751-7770 Msa1460220:CDS 30.0%
! GTTTTATGCATAATCACTCT+TGG + tig0040757:7819-7838 Msa1460220:intron 30.0%
AATACAATCTGTAGAAGACT+GGG - tig0040757:7916-7935 Msa1460220:intergenic 30.0%
AAATACAATCTGTAGAAGAC+TGG - tig0040757:7917-7936 Msa1460220:intergenic 30.0%
CAGATTGTATTTGATGTCTA+TGG + tig0040757:7925-7944 Msa1460220:CDS 30.0%
GTTGCAATAAACAGATAACT+AGG + tig0040757:8011-8030 Msa1460220:intron 30.0%
TATAACATAAAAGACCCAAG+TGG - tig0040757:8045-8064 Msa1460220:intergenic 30.0%
! GACTATGTTAGTTTACCAAT+AGG + tig0040757:8199-8218 Msa1460220:intron 30.0%
GATTAACTCATCTCTTTCTT+CGG + tig0040757:8235-8254 Msa1460220:intron 30.0%
ATGCAGAAAAATGTATGAGA+CGG - tig0040757:8329-8348 Msa1460220:intergenic 30.0%
TTTCTGCATATTCAATCCTT+AGG + tig0040757:8340-8359 Msa1460220:intron 30.0%
! TTTTGTTCTAATGCTTTTGC+AGG + tig0040757:8490-8509 Msa1460220:intron 30.0%
! AGAAGATTTTCACTTCCTTT+TGG - tig0040757:8596-8615 Msa1460220:intergenic 30.0%
GTAGATATCAAATCAGAAGA+TGG - tig0040757:8747-8766 Msa1460220:intergenic 30.0%
TGTTGAACATACTCTAAACT+TGG - tig0040757:8790-8809 Msa1460220:intergenic 30.0%
! TTTCAATATAACCTCCGTTT+TGG - tig0040757:8926-8945 Msa1460220:intergenic 30.0%
AATTGACGTAATTGAATGTG+CGG + tig0040757:9005-9024 Msa1460220:intron 30.0%
!!! CATATATGTGGTGGTTTTTT+AGG + tig0040757:9122-9141 Msa1460220:intron 30.0%
TAGGAACTAACATAACAAAG+TGG + tig0040757:9141-9160 Msa1460220:intron 30.0%
TCCCAAACATTAGCATAAAA+CGG - tig0040757:9288-9307 Msa1460220:intergenic 30.0%
! TATCTTCTGCATTCTTTTCA+GGG + tig0040757:9351-9370 Msa1460220:intron 30.0%
TTTATAAGCATCCTTTCAGT+TGG + tig0040757:9429-9448 Msa1460220:intron 30.0%
TAAACTAAACACCAACTGAA+AGG - tig0040757:9443-9462 Msa1460220:intergenic 30.0%
!!! AAGACGTTGTCATTTTCATT+GGG + tig0040757:9589-9608 Msa1460220:intron 30.0%
!! TAAGAATGGTGGATATTGTA+AGG + tig0040757:9694-9713 Msa1460220:intron 30.0%
!! TTTGAAACTTTTCCAATGGA+AGG - tig0040757:9778-9797 Msa1460220:intergenic 30.0%
TTCCATTGGAAAAGTTTCAA+AGG + tig0040757:9777-9796 Msa1460220:CDS 30.0%
TCCATTGGAAAAGTTTCAAA+GGG + tig0040757:9778-9797 Msa1460220:CDS 30.0%
TCTGTCTCTTACTCATTATT+TGG + tig0040757:9853-9872 Msa1460220:intron 30.0%
CTGTCTCTTACTCATTATTT+GGG + tig0040757:9854-9873 Msa1460220:intron 30.0%
TGTCTCTTACTCATTATTTG+GGG + tig0040757:9855-9874 Msa1460220:intron 30.0%
! CCAAAAAGGAAACTGATTTA+TGG - tig0040757:9926-9945 Msa1460220:intergenic 30.0%
! CCATAAATCAGTTTCCTTTT+TGG + tig0040757:9923-9942 Msa1460220:intron 30.0%
GTTCAGGCTAACTTAAATAT+AGG - tig0040757:9964-9983 Msa1460220:intergenic 30.0%
GTTATAATTTCACTCTGTTC+AGG - tig0040757:9980-9999 Msa1460220:intergenic 30.0%
GAACAGAGTGAAATTATAAC+GGG + tig0040757:9980-9999 Msa1460220:intron 30.0%
AACAGAGTGAAATTATAACG+GGG + tig0040757:9981-10000 Msa1460220:intron 30.0%
! TTTAACACCTGTAGAAGTTT+TGG + tig0040757:10123-10142 Msa1460220:CDS 30.0%
!!! CTTCTTTTTTAGAAAGGACT+TGG + tig0040757:10283-10302 Msa1460220:intron 30.0%
ATCAGTACTCTGCAATTATA+TGG - tig0040757:10315-10334 Msa1460220:intergenic 30.0%
TGTCTTGTGCATTAAATGTT+TGG + tig0040757:10526-10545 Msa1460220:intron 30.0%
! AATCAGGGTTGCATTTTATA+TGG - tig0040757:10582-10601 Msa1460220:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - tig0040757:10681-10700 Msa1460220:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - tig0040757:10682-10701 Msa1460220:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - tig0040757:10785-10804 Msa1460220:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + tig0040757:10833-10852 Msa1460220:intron 30.0%
TTGGTAAGCTAAATGGTAAT+GGG - tig0040757:10884-10903 Msa1460220:intergenic 30.0%
TTTGGTAAGCTAAATGGTAA+TGG - tig0040757:10885-10904 Msa1460220:intergenic 30.0%
!! TCAGATTTTGGTAAGCTAAA+TGG - tig0040757:10891-10910 Msa1460220:intergenic 30.0%
!! GTCACAACTTATGTTTTGAA+AGG - tig0040757:10976-10995 Msa1460220:intergenic 30.0%
! GTGACTCTGAATTATTGTTT+TGG + tig0040757:10991-11010 Msa1460220:intron 30.0%
TCATGTTTGACCAATAATAG+TGG + tig0040757:11122-11141 Msa1460220:intron 30.0%
AAAAACAAATTTACCAGTGC+AGG - tig0040757:11253-11272 Msa1460220:intergenic 30.0%
TAACTTATACAGAGCTTATG+TGG + tig0040757:11434-11453 Msa1460220:intron 30.0%
! AAACATTTTCCTAGGACTAA+GGG - tig0040757:11552-11571 Msa1460220:intergenic 30.0%
!!! TTTTGAAGTCTTGCATCATA+TGG + tig0040757:11594-11613 Msa1460220:intron 30.0%
!!! TATCTAGGTTGATTTTGTCA+TGG + tig0040757:11647-11666 Msa1460220:intron 30.0%
ATTAAGTAAGCATACCTGTT+TGG - tig0040757:11694-11713 Msa1460220:intergenic 30.0%
GCTTACTTAATCTTGAATTC+AGG + tig0040757:11703-11722 Msa1460220:CDS 30.0%
! GAATTCAGGTTATTCCAATA+AGG + tig0040757:11717-11736 Msa1460220:intron 30.0%
ATAAAGTAAAACATCAGCTG+CGG - tig0040757:11748-11767 Msa1460220:intergenic 30.0%
! TTTTACTTTATTCTGAGTGC+AGG + tig0040757:11757-11776 Msa1460220:intron 30.0%
ACCACTTATTATCACAATTC+AGG - tig0040757:11897-11916 Msa1460220:intergenic 30.0%
! CTAAGTGAAGATTTTACAGT+TGG - tig0040757:12073-12092 Msa1460220:intergenic 30.0%
CTGTAAAATCTTCACTTAGT+AGG + tig0040757:12074-12093 Msa1460220:intron 30.0%
! TGAATTTTAAGCACTTCATC+AGG + tig0040757:12150-12169 Msa1460220:intron 30.0%
! GAATTTTAAGCACTTCATCA+GGG + tig0040757:12151-12170 Msa1460220:intron 30.0%
ATTTGATCAGGGTACATATT+TGG + tig0040757:12232-12251 Msa1460220:intron 30.0%
! AGTTTTTACCAAGGATTCAA+GGG - tig0040757:12293-12312 Msa1460220:intergenic 30.0%
! TAGTTTTTACCAAGGATTCA+AGG - tig0040757:12294-12313 Msa1460220:intergenic 30.0%
AGATCAACTTTAGTTGTTCT+CGG + tig0040757:12638-12657 Msa1460220:intron 30.0%
! CATCGACCATATTTTCAATT+GGG - tig0040757:12791-12810 Msa1460220:intergenic 30.0%
! TCATCGACCATATTTTCAAT+TGG - tig0040757:12792-12811 Msa1460220:intergenic 30.0%
!!! GACTGTATCATAGTTTTTTG+TGG + tig0040757:13041-13060 Msa1460220:three_prime_UTR 30.0%
TCACATTTCATGACCAAAAA+AGG - tig0040757:13119-13138 Msa1460220:intergenic 30.0%
! ATTGCATTTTGAGCATTATC+AGG - tig0040757:13195-13214 Msa1460220:intergenic 30.0%
AACGAACCCTTAATCTTATT+CGG - tig0040757:13234-13253 Msa1460220:intergenic 30.0%
TGTTCATTATCATGAGGAAC+AGG - tig0040757:665-684 Msa1460220:intergenic 35.0%
GCCAATTGTTCATTATCATG+AGG - tig0040757:671-690 Msa1460220:intergenic 35.0%
GATAATGAACAATTGGCCAA+TGG + tig0040757:674-693 Msa1460220:CDS 35.0%
CTTTCCAAAACAGGAACATT+AGG - tig0040757:809-828 Msa1460220:intergenic 35.0%
GTTAGTTCACTTTCCAAAAC+AGG - tig0040757:818-837 Msa1460220:intergenic 35.0%
! AGCAATCAAAGCACCAATAA+CGG - tig0040757:861-880 Msa1460220:intergenic 35.0%
ACAGATTCATCCTGATCTAT+TGG + tig0040757:922-941 Msa1460220:CDS 35.0%
ACAATATCAGCCAATAGATC+AGG - tig0040757:935-954 Msa1460220:intergenic 35.0%
TAGAAATGGCTGTAGTTGAA+GGG - tig0040757:1126-1145 Msa1460220:intergenic 35.0%
ATCCTCAGATTCTAAATGTG+TGG - tig0040757:1435-1454 Msa1460220:intergenic 35.0%
GCAGGTTTAATTAAAGACAC+GGG - tig0040757:1458-1477 Msa1460220:intergenic 35.0%
GGCAGGTTTAATTAAAGACA+CGG - tig0040757:1459-1478 Msa1460220:intergenic 35.0%
AAGCATTTGCTTCCATAATC+TGG - tig0040757:1631-1650 Msa1460220:intergenic 35.0%
TATGGAAGCAAATGCTTCTA+TGG + tig0040757:1634-1653 Msa1460220:CDS 35.0%
! TCTGAGTACAGCAAATCTTT+TGG + tig0040757:1694-1713 Msa1460220:CDS 35.0%
GAGTCATACAATCATTTGCA+AGG + tig0040757:1902-1921 Msa1460220:CDS 35.0%
GTCATACAATCATTTGCAAG+GGG + tig0040757:1904-1923 Msa1460220:CDS 35.0%
CCGAGTCATAAAGATAAGAA+TGG + tig0040757:2310-2329 Msa1460220:intron 35.0%
GATTGAGTAATCAAAACCAC+CGG - tig0040757:2452-2471 Msa1460220:intergenic 35.0%
GACAAACCAAAACATTCCTT+TGG - tig0040757:2493-2512 Msa1460220:intergenic 35.0%
TCGAGGCAATAAAATTGAAG+AGG + tig0040757:2735-2754 Msa1460220:intron 35.0%
AGGCAATAAAATTGAAGAGG+TGG + tig0040757:2738-2757 Msa1460220:intron 35.0%
CGTTGCAATTAAGTAATGAG+TGG + tig0040757:2790-2809 Msa1460220:intron 35.0%
AATTAAGTAATGAGTGGGGT+TGG + tig0040757:2796-2815 Msa1460220:intron 35.0%
TTGTGAAGTCAAGACATGAT+TGG + tig0040757:2880-2899 Msa1460220:intron 35.0%
TGTGAAGTCAAGACATGATT+GGG + tig0040757:2881-2900 Msa1460220:intron 35.0%
CACACAAAATTACAACGGAT+TGG - tig0040757:3050-3069 Msa1460220:intergenic 35.0%
! TTTAAGCTTTATCTTGCGGA+AGG + tig0040757:3103-3122 Msa1460220:intron 35.0%
! ATATTTCTACCAACAGAGGT+TGG - tig0040757:3484-3503 Msa1460220:intergenic 35.0%
ATTAATTTCTGTACGCCACA+AGG + tig0040757:3576-3595 Msa1460220:intron 35.0%
!! CAGATTCTAAAATGCAGAAG+AGG - tig0040757:3747-3766 Msa1460220:intergenic 35.0%
! TATATTTCGAGTGCAGTTGT+TGG + tig0040757:3824-3843 Msa1460220:intron 35.0%
CATTTCACTCTCTTCAATAG+GGG + tig0040757:3872-3891 Msa1460220:intron 35.0%
! AGCCAAGTAGTCCAAATTTT+TGG - tig0040757:3964-3983 Msa1460220:intergenic 35.0%
!! ACTGGTGTACTCATTTTAGT+GGG - tig0040757:4002-4021 Msa1460220:intergenic 35.0%
! AACTGGTGTACTCATTTTAG+TGG - tig0040757:4003-4022 Msa1460220:intergenic 35.0%
GAGGCTTAAAATGTGTATGA+TGG + tig0040757:4128-4147 Msa1460220:intron 35.0%
CACAATATGCTTGACAAATG+AGG - tig0040757:4263-4282 Msa1460220:intergenic 35.0%
AAGTTAGAGTCATACAAGAC+TGG - tig0040757:4744-4763 Msa1460220:intergenic 35.0%
ATATCATCAAGGAGTGAAGA+TGG - tig0040757:4898-4917 Msa1460220:intergenic 35.0%
! TCTTCACTCCTTGATGATAT+TGG + tig0040757:4898-4917 Msa1460220:CDS 35.0%
TGCTGAATCCAATATCATCA+AGG - tig0040757:4909-4928 Msa1460220:intergenic 35.0%
! TTGATGATATTGGATTCAGC+AGG + tig0040757:4908-4927 Msa1460220:CDS 35.0%
TCAGATTATTACCTCTGTGT+AGG + tig0040757:5059-5078 Msa1460220:intron 35.0%
AAAATCTTCAAGGCAGATTC+AGG - tig0040757:5159-5178 Msa1460220:intergenic 35.0%
! TGAATCTGCCTTGAAGATTT+TGG + tig0040757:5158-5177 Msa1460220:CDS 35.0%
TGTCTCTAGTAGCTTAGTAT+CGG + tig0040757:5348-5367 Msa1460220:intron 35.0%
CATGTACACGAAGAATTTGA+AGG - tig0040757:5423-5442 Msa1460220:intergenic 35.0%
TCGGACCAAATAATTGGAAA+AGG - tig0040757:5464-5483 Msa1460220:intergenic 35.0%
! TTTGCCTGTTTTCTTGAAGT+TGG + tig0040757:5582-5601 Msa1460220:intron 35.0%
AAAGCCAACTTCAAGAAAAC+AGG - tig0040757:5589-5608 Msa1460220:intergenic 35.0%
! GGCTTTTCTTTTTCTGTTGT+TGG + tig0040757:5603-5622 Msa1460220:intron 35.0%
AGATTCGAGCTAAAGCTATT+CGG + tig0040757:5702-5721 Msa1460220:CDS 35.0%
! AGATGAGTTGGATCCAAATT+TGG - tig0040757:6174-6193 Msa1460220:intergenic 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG - tig0040757:6239-6258 Msa1460220:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - tig0040757:6264-6283 Msa1460220:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - tig0040757:6267-6286 Msa1460220:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + tig0040757:6268-6287 Msa1460220:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - tig0040757:6320-6339 Msa1460220:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - tig0040757:6325-6344 Msa1460220:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - tig0040757:6345-6364 Msa1460220:intergenic 35.0%
AGACTAGACAAGATAGGATT+AGG - tig0040757:6397-6416 Msa1460220:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - tig0040757:6532-6551 Msa1460220:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + tig0040757:6536-6555 Msa1460220:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - tig0040757:6545-6564 Msa1460220:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + tig0040757:6643-6662 Msa1460220:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - tig0040757:6671-6690 Msa1460220:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + tig0040757:6672-6691 Msa1460220:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + tig0040757:6674-6693 Msa1460220:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - tig0040757:6685-6704 Msa1460220:intergenic 35.0%
TGGAATGTAACTTCAGCAAA+AGG - tig0040757:6745-6764 Msa1460220:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + tig0040757:6878-6897 Msa1460220:intron 35.0%
!!! TTTAGTTTTGGATGTGCTGA+CGG - tig0040757:6924-6943 Msa1460220:intergenic 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - tig0040757:7243-7262 Msa1460220:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - tig0040757:7244-7263 Msa1460220:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - tig0040757:7269-7288 Msa1460220:intergenic 35.0%
TAAGCTAATGAGTCATACCA+TGG - tig0040757:7323-7342 Msa1460220:intergenic 35.0%
GTCTAGGAACAGAAATATCA+GGG - tig0040757:7503-7522 Msa1460220:intergenic 35.0%
TGTCTAGGAACAGAAATATC+AGG - tig0040757:7504-7523 Msa1460220:intergenic 35.0%
GACAAAACATGATCATGTCT+AGG - tig0040757:7519-7538 Msa1460220:intergenic 35.0%
GATAAACTCATCGTCAATAG+TGG + tig0040757:7622-7641 Msa1460220:intron 35.0%
GTCGAAAGTCTTGAAATAAG+TGG + tig0040757:7662-7681 Msa1460220:CDS 35.0%
TGAAATAAGTGGTACTTCAC+AGG + tig0040757:7673-7692 Msa1460220:CDS 35.0%
!! GATGAAACACTTTGACTTGA+TGG - tig0040757:7737-7756 Msa1460220:intergenic 35.0%
CTGCAAGGATAAGAAAACTT+GGG - tig0040757:7890-7909 Msa1460220:intergenic 35.0%
TCTGCAAGGATAAGAAAACT+TGG - tig0040757:7891-7910 Msa1460220:intergenic 35.0%
AACTAGGTTAATCATCCACT+TGG + tig0040757:8027-8046 Msa1460220:intron 35.0%
ACTAGGTTAATCATCCACTT+GGG + tig0040757:8028-8047 Msa1460220:intron 35.0%
TAACTAGTGTTCAGACTCTA+AGG - tig0040757:8087-8106 Msa1460220:intergenic 35.0%
!! GTGTGGAACAGATCTTATTT+TGG + tig0040757:8175-8194 Msa1460220:intron 35.0%
AAAATGTATGAGACGGAAAG+CGG - tig0040757:8322-8341 Msa1460220:intergenic 35.0%
! CTTAGGTTTAGCTCATGTAT+GGG + tig0040757:8357-8376 Msa1460220:intron 35.0%
GGACGTGGTTATAATGATAT+AGG - tig0040757:8440-8459 Msa1460220:intergenic 35.0%
TTCAGAATAAGATTGCCCTA+GGG - tig0040757:8549-8568 Msa1460220:intergenic 35.0%
ATTCAGAATAAGATTGCCCT+AGG - tig0040757:8550-8569 Msa1460220:intergenic 35.0%
! TTGGTGGATCAGATATGATA+TGG - tig0040757:8577-8596 Msa1460220:intergenic 35.0%
ATCATATCTGATCCACCAAA+AGG + tig0040757:8578-8597 Msa1460220:CDS 35.0%
! AGATTTTCACTTCCTTTTGG+TGG - tig0040757:8593-8612 Msa1460220:intergenic 35.0%
AAGTGAAAATCTTCTGACAC+TGG + tig0040757:8601-8620 Msa1460220:CDS 35.0%
AGAATTGTAACATCCTGCAA+AGG - tig0040757:8880-8899 Msa1460220:intergenic 35.0%
TCTCACCATTCACATATATG+TGG + tig0040757:9110-9129 Msa1460220:intron 35.0%
AACCACCACATATATGTGAA+TGG - tig0040757:9118-9137 Msa1460220:intergenic 35.0%
GCATCATAGTGTGATCTAAT+TGG + tig0040757:9163-9182 Msa1460220:intron 35.0%
CGTGTTGCACTATAATACAA+TGG - tig0040757:9265-9284 Msa1460220:intergenic 35.0%
!! GCCGTTTTATGCTAATGTTT+GGG + tig0040757:9284-9303 Msa1460220:intron 35.0%
! GTATCTTCTGCATTCTTTTC+AGG + tig0040757:9350-9369 Msa1460220:intron 35.0%
CTAGAATAAACTTTACCAGC+TGG - tig0040757:9498-9517 Msa1460220:intergenic 35.0%
CAGCTGGTAAAGTTTATTCT+AGG + tig0040757:9496-9515 Msa1460220:intron 35.0%
CTTAACCAGATAGAACTAGA+TGG - tig0040757:9554-9573 Msa1460220:intergenic 35.0%
! AGTTCTATCTGGTTAAGTTG+TGG + tig0040757:9557-9576 Msa1460220:intron 35.0%
!!! GAAGACGTTGTCATTTTCAT+TGG + tig0040757:9588-9607 Msa1460220:intron 35.0%
TAAGCACATGATGCAATGTT+AGG + tig0040757:9648-9667 Msa1460220:intron 35.0%
!! ATGCAATGTTAGGTGTTGAT+TGG + tig0040757:9658-9677 Msa1460220:intron 35.0%
! GCATGTTCTTGTTGTAAGAA+TGG + tig0040757:9680-9699 Msa1460220:intron 35.0%
! TGTTCTTGTTGTAAGAATGG+TGG + tig0040757:9683-9702 Msa1460220:intron 35.0%
TTCAATTGTTTCCTGATTGC+AGG + tig0040757:9724-9743 Msa1460220:intron 35.0%
AATTGGTAAAACCTGCAATC+AGG - tig0040757:9738-9757 Msa1460220:intergenic 35.0%
! GAAACTGATTTATGGAAGTG+GGG - tig0040757:9918-9937 Msa1460220:intergenic 35.0%
! GGAAACTGATTTATGGAAGT+GGG - tig0040757:9919-9938 Msa1460220:intergenic 35.0%
! AGGAAACTGATTTATGGAAG+TGG - tig0040757:9920-9939 Msa1460220:intergenic 35.0%
TATTCTAAGCTATTCATGGC+AGG + tig0040757:10078-10097 Msa1460220:intron 35.0%
ATTCTAAGCTATTCATGGCA+GGG + tig0040757:10079-10098 Msa1460220:intron 35.0%
ATTGCAACCAAAACTTCTAC+AGG - tig0040757:10133-10152 Msa1460220:intergenic 35.0%
ATTCTCTCCTCTCTTATATC+TGG + tig0040757:10240-10259 Msa1460220:intron 35.0%
TTCTCTCCTCTCTTATATCT+GGG + tig0040757:10241-10260 Msa1460220:intron 35.0%
! TGTAAGTGCATTATTTTCCC+TGG + tig0040757:10405-10424 Msa1460220:intron 35.0%
! GTAAGTGCATTATTTTCCCT+GGG + tig0040757:10406-10425 Msa1460220:intron 35.0%
! GCTTTTCATGCATGAGTAAA+AGG - tig0040757:10465-10484 Msa1460220:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - tig0040757:10646-10665 Msa1460220:intergenic 35.0%
! CAGTACAGCTAATCAGATTT+TGG - tig0040757:10903-10922 Msa1460220:intergenic 35.0%
CAAGGTACAACCACTATTAT+TGG - tig0040757:11135-11154 Msa1460220:intergenic 35.0%
ATTGTTCTCATGAAAAGCAG+AGG - tig0040757:11208-11227 Msa1460220:intergenic 35.0%
TTAGATGATATGTGCCATAC+TGG + tig0040757:11353-11372 Msa1460220:intron 35.0%
! CAAACATTTTCCTAGGACTA+AGG - tig0040757:11553-11572 Msa1460220:intergenic 35.0%
CTTAGTCCTAGGAAAATGTT+TGG + tig0040757:11551-11570 Msa1460220:intron 35.0%
! CAACAACCAAACATTTTCCT+AGG - tig0040757:11560-11579 Msa1460220:intergenic 35.0%
!!! TTTGGTTGTTGTTTTCGTTG+TGG + tig0040757:11569-11588 Msa1460220:intron 35.0%
! AAGAAACCAACCCAAAGTTT+TGG - tig0040757:11794-11813 Msa1460220:intergenic 35.0%
GCCTGAATTGTGATAATAAG+TGG + tig0040757:11893-11912 Msa1460220:intron 35.0%
AGCTTGAAAGACAATGAATG+CGG - tig0040757:11926-11945 Msa1460220:intergenic 35.0%
TCTTTCAAGCTGGTTATGTT+GGG + tig0040757:11935-11954 Msa1460220:intron 35.0%
! GGGTTGAATCATAACCTTTT+TGG + tig0040757:11955-11974 Msa1460220:intron 35.0%
CTACAAGGAGAAAACCAAAA+AGG - tig0040757:11972-11991 Msa1460220:intergenic 35.0%
! AGATTTTACAGTTGGTTGGT+TGG - tig0040757:12065-12084 Msa1460220:intergenic 35.0%
! GTGAAGATTTTACAGTTGGT+TGG - tig0040757:12069-12088 Msa1460220:intergenic 35.0%
TCCTTGGTAAAAACTAGATG+TGG + tig0040757:12298-12317 Msa1460220:intron 35.0%
!!! ACCACATCTAGTTTTTACCA+AGG - tig0040757:12302-12321 Msa1460220:intergenic 35.0%
TAGATGTGGTTAACTCTTGA+AGG + tig0040757:12312-12331 Msa1460220:intron 35.0%
AGATGTGGTTAACTCTTGAA+GGG + tig0040757:12313-12332 Msa1460220:intron 35.0%
AAAAGTTCTTCGGTGACAAA+TGG - tig0040757:12463-12482 Msa1460220:intergenic 35.0%
!!! TGTCACCGAAGAACTTTTTT+TGG + tig0040757:12465-12484 Msa1460220:intron 35.0%
GTCCTCCAAAAAAAGTTCTT+CGG - tig0040757:12473-12492 Msa1460220:intergenic 35.0%
TGGAGGACGAAGAATAAAAT+AGG + tig0040757:12485-12504 Msa1460220:intron 35.0%
TAAGATTCTCCTTTGCATTC+TGG + tig0040757:12553-12572 Msa1460220:intron 35.0%
AAGATTCTCCTTTGCATTCT+GGG + tig0040757:12554-12573 Msa1460220:intron 35.0%
AAGTATATCCCAGAATGCAA+AGG - tig0040757:12565-12584 Msa1460220:intergenic 35.0%
AGACAAGTACTTCAGTTAGT+GGG + tig0040757:12717-12736 Msa1460220:CDS 35.0%
TGACATGATAGTTGATTGAC+TGG + tig0040757:12747-12766 Msa1460220:exon 35.0%
GACAAATTGTTTGAACCAAC+CGG + tig0040757:12885-12904 Msa1460220:three_prime_UTR 35.0%
ATATAACCCGGTTGAATCAA+AGG + tig0040757:12929-12948 Msa1460220:three_prime_UTR 35.0%
ACAAATTTCCTCTCCATGAT+TGG + tig0040757:12973-12992 Msa1460220:three_prime_UTR 35.0%
TTTCCTTAAGCACTTGAAAG+AGG - tig0040757:13001-13020 Msa1460220:intergenic 35.0%
AACTATGATACAGTCATGGA+AGG - tig0040757:13036-13055 Msa1460220:intergenic 35.0%
ATCAGGATTATCACATCCTT+TGG - tig0040757:13178-13197 Msa1460220:intergenic 35.0%
AAAGCCCCGAATAAGATTAA+GGG + tig0040757:13225-13244 Msa1460220:three_prime_UTR 35.0%
ACGAACCCTTAATCTTATTC+GGG - tig0040757:13233-13252 Msa1460220:intergenic 35.0%
ATGCAGCTGATCAGGTAATT+CGG + tig0040757:424-443 Msa1460220:intron 40.0%
CTGCTCAAGCTAATGATTCT+GGG + tig0040757:753-772 Msa1460220:CDS 40.0%
! TCAAGCTAATGATTCTGGGA+GGG + tig0040757:757-776 Msa1460220:CDS 40.0%
ATTAGGTGACACTCCGTTAA+CGG - tig0040757:792-811 Msa1460220:intergenic 40.0%
! GTCACCTAATGTTCCTGTTT+TGG + tig0040757:802-821 Msa1460220:CDS 40.0%
GAGCAAATGATTGCCGTTAT+TGG + tig0040757:845-864 Msa1460220:CDS 40.0%
! ATTGGTGCTTTGATTGCTGA+AGG + tig0040757:863-882 Msa1460220:CDS 40.0%
TTGATTGCTGAAGGAGAAAG+AGG + tig0040757:872-891 Msa1460220:CDS 40.0%
! TAATATGAAGCACCTGCCTA+AGG + tig0040757:961-980 Msa1460220:CDS 40.0%
GTAGAAATGGCTGTAGTTGA+AGG - tig0040757:1127-1146 Msa1460220:intergenic 40.0%
TGAAGAAGTGGCAGTAGAAA+TGG - tig0040757:1140-1159 Msa1460220:intergenic 40.0%
CTGAAATTAGATGTGTCGGA+TGG - tig0040757:1166-1185 Msa1460220:intergenic 40.0%
AATGATGACATGATCTCCGA+AGG + tig0040757:1539-1558 Msa1460220:CDS 40.0%
AGACAGGTATCTTCTGATGT+GGG - tig0040757:1797-1816 Msa1460220:intergenic 40.0%
TCTTGGGATAGTTGGATGTA+AGG - tig0040757:1839-1858 Msa1460220:intergenic 40.0%
TTTCCTGTTCTTGGGATAGT+TGG - tig0040757:1847-1866 Msa1460220:intergenic 40.0%
ATCCCAAGAACAGGAAAGTA+AGG + tig0040757:1850-1869 Msa1460220:CDS 40.0%
CACCTTACTTTCCTGTTCTT+GGG - tig0040757:1855-1874 Msa1460220:intergenic 40.0%
TCACCTTACTTTCCTGTTCT+TGG - tig0040757:1856-1875 Msa1460220:intergenic 40.0%
GGAAAGTAAGGTGAAACACA+TGG + tig0040757:1862-1881 Msa1460220:CDS 40.0%
! GTGTGATTAGGCGTCTTTTA+AGG + tig0040757:2335-2354 Msa1460220:intron 40.0%
!!! GATTAGGCGTCTTTTAAGGT+AGG + tig0040757:2339-2358 Msa1460220:intron 40.0%
! GTGAACCCAAAGGAATGTTT+TGG + tig0040757:2484-2503 Msa1460220:intron 40.0%
!! ATTAACACAAAGCATCGGGT+GGG + tig0040757:2530-2549 Msa1460220:intron 40.0%
AATGAAGCACAGTCATATCG+AGG + tig0040757:2718-2737 Msa1460220:intron 40.0%
! TTGCGGAAGGAACTTTTTGA+AGG + tig0040757:3116-3135 Msa1460220:intron 40.0%
! TTTAGGTGATTTGGGTTCTG+AGG + tig0040757:3341-3360 Msa1460220:intron 40.0%
!! ATCTGGAAGTATCTTTGCCT+TGG - tig0040757:3377-3396 Msa1460220:intergenic 40.0%
GATGCTGCAAAAACACATTC+TGG + tig0040757:3701-3720 Msa1460220:CDS 40.0%
!! CTGGTGTACTCATTTTAGTG+GGG - tig0040757:4001-4020 Msa1460220:intergenic 40.0%
! ACACCAGTTACCTCCTTTTA+TGG + tig0040757:4014-4033 Msa1460220:intron 40.0%
! CACCAGTTACCTCCTTTTAT+GGG + tig0040757:4015-4034 Msa1460220:intron 40.0%
AATCAACGTCCCATAAAAGG+AGG - tig0040757:4027-4046 Msa1460220:intergenic 40.0%
! AAACTACCAAAGGTGTGGAA+TGG - tig0040757:4309-4328 Msa1460220:intergenic 40.0%
! TCCACACCTTTGGTAGTTTA+AGG + tig0040757:4310-4329 Msa1460220:intron 40.0%
ACCTTAAACTACCAAAGGTG+TGG - tig0040757:4314-4333 Msa1460220:intergenic 40.0%
! AATAGTGGCTGGTTACTTGT+TGG + tig0040757:4668-4687 Msa1460220:intron 40.0%
! TGGTTACTTGTTGGAATGTC+TGG + tig0040757:4677-4696 Msa1460220:intron 40.0%
TTGTTGGAATGTCTGGATTC+TGG + tig0040757:4684-4703 Msa1460220:intron 40.0%
TGATAACTTTCTCTTGGGAG+TGG + tig0040757:4958-4977 Msa1460220:CDS 40.0%
TGTGTAGGCCAAAACTGTAT+TGG + tig0040757:5074-5093 Msa1460220:intron 40.0%
! CTAAAAGACTTGTCTGAAGC+TGG - tig0040757:5108-5127 Msa1460220:intergenic 40.0%
TCTGATGTTGTTGATCACGA+TGG + tig0040757:5195-5214 Msa1460220:CDS 40.0%
TTAAACTCCAGATAGCACCA+AGG - tig0040757:5257-5276 Msa1460220:intergenic 40.0%
! CTGCTTAGGAATAGCATTGA+AGG + tig0040757:5305-5324 Msa1460220:CDS 40.0%
!! GTGGCTATTTTGCAAAACAG+TGG - tig0040757:5544-5563 Msa1460220:intergenic 40.0%
! CATTTTTGCTTGTGTTGGAC+AGG + tig0040757:5793-5812 Msa1460220:intron 40.0%
ACCTACTGAACAAAGAACAG+AGG + tig0040757:5928-5947 Msa1460220:CDS 40.0%
ATACCTCGTAATGATCTCTC+TGG + tig0040757:6014-6033 Msa1460220:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG - tig0040757:6245-6264 Msa1460220:intergenic 40.0%
GTGGTAAGACTAGACAAGAT+AGG - tig0040757:6403-6422 Msa1460220:intergenic 40.0%
TACATCATCGTATTCAAGCC+GGG - tig0040757:6610-6629 Msa1460220:intergenic 40.0%
GTACATCATCGTATTCAAGC+CGG - tig0040757:6611-6630 Msa1460220:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - tig0040757:6650-6669 Msa1460220:intergenic 40.0%
ACTTCAGCAAAAGGAGAAGT+GGG - tig0040757:6736-6755 Msa1460220:intergenic 40.0%
AACTTCAGCAAAAGGAGAAG+TGG - tig0040757:6737-6756 Msa1460220:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG - tig0040757:6765-6784 Msa1460220:intergenic 40.0%
TAACAATAGGACTGCACCAA+GGG - tig0040757:6973-6992 Msa1460220:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - tig0040757:6974-6993 Msa1460220:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + tig0040757:6973-6992 Msa1460220:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + tig0040757:6974-6993 Msa1460220:intron 40.0%
TATCCAGGATATGTATGAGG+GGG - tig0040757:7044-7063 Msa1460220:intergenic 40.0%
CTATCCAGGATATGTATGAG+GGG - tig0040757:7045-7064 Msa1460220:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG - tig0040757:7046-7065 Msa1460220:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - tig0040757:7047-7066 Msa1460220:intergenic 40.0%
ATCCTGGATAGCTCGAATAT+AGG + tig0040757:7054-7073 Msa1460220:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG + tig0040757:7103-7122 Msa1460220:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - tig0040757:7111-7130 Msa1460220:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - tig0040757:7240-7259 Msa1460220:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + tig0040757:7239-7258 Msa1460220:intron 40.0%
CACGTTACGGATAACCAATT+TGG - tig0040757:7256-7275 Msa1460220:intergenic 40.0%
TACCATGGAGTTATGGGAAA+GGG - tig0040757:7308-7327 Msa1460220:intergenic 40.0%
ATACCATGGAGTTATGGGAA+AGG - tig0040757:7309-7328 Msa1460220:intergenic 40.0%
GAGTCATACCATGGAGTTAT+GGG - tig0040757:7314-7333 Msa1460220:intergenic 40.0%
TGAGTCATACCATGGAGTTA+TGG - tig0040757:7315-7334 Msa1460220:intergenic 40.0%
!! TCGTACAAAATCGGCTTGTA+AGG - tig0040757:7409-7428 Msa1460220:intergenic 40.0%
AAACCAAGAGAGACATCGTT+TGG + tig0040757:7585-7604 Msa1460220:intron 40.0%
ACTAGTTATGAAGTTTGCCC+TGG + tig0040757:8099-8118 Msa1460220:intron 40.0%
TATAACTGCTCCAAAGACCA+GGG - tig0040757:8119-8138 Msa1460220:intergenic 40.0%
CCATACATGAGCTAAACCTA+AGG - tig0040757:8359-8378 Msa1460220:intergenic 40.0%
! CCTTAGGTTTAGCTCATGTA+TGG + tig0040757:8356-8375 Msa1460220:intron 40.0%
CCACATTCCTAATCTTGTGA+GGG + tig0040757:8523-8542 Msa1460220:CDS 40.0%
GCTTTCATGTGCTAGTAACT+CGG - tig0040757:8666-8685 Msa1460220:intergenic 40.0%
!! TTATTCTGGTTCTCCTTTGC+AGG + tig0040757:8864-8883 Msa1460220:intron 40.0%
TTGGAGAGCGATGACAATAA+TGG - tig0040757:8907-8926 Msa1460220:intergenic 40.0%
ATTGTCATCGCTCTCCAAAA+CGG + tig0040757:8909-8928 Msa1460220:CDS 40.0%
CACCATTCACATATATGTGG+TGG + tig0040757:9113-9132 Msa1460220:intron 40.0%
!! CGCCGTTTTATGCTAATGTT+TGG + tig0040757:9283-9302 Msa1460220:intron 40.0%
GCTGGATCTAGATTTGACAT+TGG - tig0040757:9480-9499 Msa1460220:intergenic 40.0%
ATGTCAAATCTAGATCCAGC+TGG + tig0040757:9480-9499 Msa1460220:intron 40.0%
!! AACCACCATCTAGTTCTATC+TGG + tig0040757:9546-9565 Msa1460220:intron 40.0%
AACCAGATAGAACTAGATGG+TGG - tig0040757:9551-9570 Msa1460220:intergenic 40.0%
!!! GCCCTTTGAAACTTTTCCAA+TGG - tig0040757:9782-9801 Msa1460220:intergenic 40.0%
CACATGTACCTGTAGTATGT+GGG - tig0040757:9810-9829 Msa1460220:intergenic 40.0%
TCACATGTACCTGTAGTATG+TGG - tig0040757:9811-9830 Msa1460220:intergenic 40.0%
! ATTTGGGGTTACCTACAATC+TGG + tig0040757:9870-9889 Msa1460220:intron 40.0%
! TTTGGGGTTACCTACAATCT+GGG + tig0040757:9871-9890 Msa1460220:intron 40.0%
TTAGCACCCATTTAGAGAGA+GGG - tig0040757:10057-10076 Msa1460220:intergenic 40.0%
ACTTCTACAGGTGTTAAAGC+TGG - tig0040757:10121-10140 Msa1460220:intergenic 40.0%
!!! GAAGTTTTGGTTGCAATCCA+TGG + tig0040757:10136-10155 Msa1460220:CDS 40.0%
CTTTCTCAGGAACAATTCCA+TGG - tig0040757:10156-10175 Msa1460220:intergenic 40.0%
GGAATTGTTCCTGAGAAAGA+TGG + tig0040757:10157-10176 Msa1460220:CDS 40.0%
TCTCTCCTCTCTTATATCTG+GGG + tig0040757:10242-10261 Msa1460220:intron 40.0%
TTAACCCCCAGATATAAGAG+AGG - tig0040757:10250-10269 Msa1460220:intergenic 40.0%
!! CAGGCGTTTTAAATTTCCCA+GGG - tig0040757:10425-10444 Msa1460220:intergenic 40.0%
!! ACAGGCGTTTTAAATTTCCC+AGG - tig0040757:10426-10445 Msa1460220:intergenic 40.0%
GATTGTGATTGTCTGTACCA+TGG + tig0040757:10552-10571 Msa1460220:intron 40.0%
! GCATTTTATATGGCAGACCA+TGG - tig0040757:10572-10591 Msa1460220:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - tig0040757:10645-10664 Msa1460220:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + tig0040757:10836-10855 Msa1460220:intron 40.0%
ACTTTCTCTTGTGAACTCCT+TGG + tig0040757:11396-11415 Msa1460220:intron 40.0%
CTCAAAACTTGTGACCAAAC+AGG + tig0040757:11677-11696 Msa1460220:CDS 40.0%
GCATTCATTGTCTTTCAAGC+TGG + tig0040757:11925-11944 Msa1460220:intron 40.0%
GTCTTTCAAGCTGGTTATGT+TGG + tig0040757:11934-11953 Msa1460220:intron 40.0%
TTGGTTGGCATAAGAAGCAA+GGG - tig0040757:12050-12069 Msa1460220:intergenic 40.0%
!!! CACCGAAGAACTTTTTTTGG+AGG + tig0040757:12468-12487 Msa1460220:intron 40.0%
TCAGAATGGTGCAATGATGT+CGG - tig0040757:12698-12717 Msa1460220:intergenic 40.0%
! CTGAAGTACTTGTCTCAGAA+TGG - tig0040757:12712-12731 Msa1460220:intergenic 40.0%
GAGACAAGTACTTCAGTTAG+TGG + tig0040757:12716-12735 Msa1460220:CDS 40.0%
GACAAGTACTTCAGTTAGTG+GGG + tig0040757:12718-12737 Msa1460220:CDS 40.0%
!! ACTGGCAGAATTTTAGTCCA+TGG + tig0040757:12765-12784 Msa1460220:three_prime_UTR 40.0%
! CCATATTTTCAATTGGGCCA+TGG - tig0040757:12785-12804 Msa1460220:intergenic 40.0%
CCATGGCCCAATTGAAAATA+TGG + tig0040757:12782-12801 Msa1460220:three_prime_UTR 40.0%
ACACTCAATAAGCTGCATTC+CGG - tig0040757:12907-12926 Msa1460220:intergenic 40.0%
GCATGATCATCATTCTCCAA+AGG + tig0040757:13159-13178 Msa1460220:three_prime_UTR 40.0%
GAAAGCCCCGAATAAGATTA+AGG + tig0040757:13224-13243 Msa1460220:three_prime_UTR 40.0%
CGAACCCTTAATCTTATTCG+GGG - tig0040757:13232-13251 Msa1460220:intergenic 40.0%
CTTGTTAACTCGAGCATCAC+GGG - tig0040757:487-506 Msa1460220:intergenic 45.0%
CCTTGTTAACTCGAGCATCA+CGG - tig0040757:488-507 Msa1460220:intergenic 45.0%
CTAGGTGTCAGAAGCTTACT+TGG - tig0040757:541-560 Msa1460220:intergenic 45.0%
AAACGGGGAAAACTAGTGCT+AGG - tig0040757:559-578 Msa1460220:intergenic 45.0%
CTAGATGATTCCCCTGAAAC+GGG - tig0040757:635-654 Msa1460220:intergenic 45.0%
CCTAGATGATTCCCCTGAAA+CGG - tig0040757:636-655 Msa1460220:intergenic 45.0%
ACAATTGGCCAATGGTCATG+AGG + tig0040757:682-701 Msa1460220:CDS 45.0%
! ATTGCTAAGCGGATTCGTTC+TGG + tig0040757:707-726 Msa1460220:CDS 45.0%
GGTGAAGTAAAGTCAGAGTC+AGG - tig0040757:734-753 Msa1460220:intergenic 45.0%
! CCAGAATCATTAGCTTGAGC+AGG - tig0040757:755-774 Msa1460220:intergenic 45.0%
CCTGCTCAAGCTAATGATTC+TGG + tig0040757:752-771 Msa1460220:CDS 45.0%
CTCAAGCTAATGATTCTGGG+AGG + tig0040757:756-775 Msa1460220:CDS 45.0%
AGGGATCATAGCTCCGTTAA+CGG + tig0040757:776-795 Msa1460220:CDS 45.0%
GGAAAGTGAACTAACTGCTG+TGG + tig0040757:823-842 Msa1460220:CDS 45.0%
AGTTGAAGGGACTTGTCCTT+GGG - tig0040757:1113-1132 Msa1460220:intergenic 45.0%
TAGTTGAAGGGACTTGTCCT+TGG - tig0040757:1114-1133 Msa1460220:intergenic 45.0%
CTCAGTTACAGACGATACTG+CGG + tig0040757:1409-1428 Msa1460220:CDS 45.0%
! GGCCACACATTTAGAATCTG+AGG + tig0040757:1430-1449 Msa1460220:CDS 45.0%
! CCTTCAAGAGCCTCTGTTTT+GGG - tig0040757:1596-1615 Msa1460220:intergenic 45.0%
CCAAAACAGAGGCTCTTGAA+GGG + tig0040757:1594-1613 Msa1460220:CDS 45.0%
TCCATAATCTGGTGATCTCC+AGG - tig0040757:1620-1639 Msa1460220:intergenic 45.0%
GCAAATGCTTCTATGGATCC+CGG + tig0040757:1641-1660 Msa1460220:CDS 45.0%
CAAATGCTTCTATGGATCCC+GGG + tig0040757:1642-1661 Msa1460220:CDS 45.0%
AAATGCTTCTATGGATCCCG+GGG + tig0040757:1643-1662 Msa1460220:CDS 45.0%
TGAATCAGTGGAATAGACCC+CGG - tig0040757:1663-1682 Msa1460220:intergenic 45.0%
CAGACAGGTATCTTCTGATG+TGG - tig0040757:1798-1817 Msa1460220:intergenic 45.0%
CACATCAGAAGATACCTGTC+TGG + tig0040757:1796-1815 Msa1460220:CDS 45.0%
TGGGATAGTTGGATGTAAGG+TGG - tig0040757:1836-1855 Msa1460220:intergenic 45.0%
CATCCAACTATCCCAAGAAC+AGG + tig0040757:1841-1860 Msa1460220:CDS 45.0%
GCTACAAGTCTAGCTAGTAG+TGG - tig0040757:1953-1972 Msa1460220:intergenic 45.0%
ACTAGCTAGACTTGTAGCTC+AGG + tig0040757:1955-1974 Msa1460220:CDS 45.0%
GCAATGGATAGTGAACCCAA+AGG + tig0040757:2474-2493 Msa1460220:intron 45.0%
!! CATTAACACAAAGCATCGGG+TGG + tig0040757:2529-2548 Msa1460220:intron 45.0%
!! TTAACACAAAGCATCGGGTG+GGG + tig0040757:2531-2550 Msa1460220:intron 45.0%
ATATTGTTATGGGGCTGTCG+TGG + tig0040757:2666-2685 Msa1460220:intron 45.0%
TATTGTTATGGGGCTGTCGT+GGG + tig0040757:2667-2686 Msa1460220:intron 45.0%
TGAAGAGGTGGAAGCTGTTT+CGG + tig0040757:2750-2769 Msa1460220:intron 45.0%
!! GGGGTTGGTAGTTAATAGAG+TGG + tig0040757:2811-2830 Msa1460220:intron 45.0%
!!! GGGAGTTTTAAGCTGCCTAT+GGG + tig0040757:2922-2941 Msa1460220:intron 45.0%
!!! GGAGTTTTAAGCTGCCTATG+GGG + tig0040757:2923-2942 Msa1460220:intron 45.0%
!! AATGAGATGGGGTGTCACTA+TGG + tig0040757:3012-3031 Msa1460220:intron 45.0%
! AACACATTCTGGAAGACCAC+TGG + tig0040757:3712-3731 Msa1460220:CDS 45.0%
!! TCTCTTCAATAGGGGTACTC+TGG + tig0040757:3880-3899 Msa1460220:intron 45.0%
GTCCCATAAAAGGAGGTAAC+TGG - tig0040757:4020-4039 Msa1460220:intergenic 45.0%
TCAAGGAGTGAAGATGGTAC+AGG - tig0040757:4892-4911 Msa1460220:intergenic 45.0%
!! TACAGTTTTGGCCTACACAG+AGG - tig0040757:5073-5092 Msa1460220:intergenic 45.0%
AAGGCAGATTCAGGCAGAAA+TGG - tig0040757:5150-5169 Msa1460220:intergenic 45.0%
! CTATTCCTAAGCAGCCTTGT+CGG - tig0040757:5299-5318 Msa1460220:intergenic 45.0%
GTTTCAAATGCAGCGCAATC+TGG + tig0040757:5905-5924 Msa1460220:CDS 45.0%
GCCTCTGTTCTTTGTTCAGT+AGG - tig0040757:5932-5951 Msa1460220:intergenic 45.0%
! TGAACAAAGAACAGAGGCAC+AGG + tig0040757:5934-5953 Msa1460220:CDS 45.0%
TCTCCAGAGAGATCATTACG+AGG - tig0040757:6020-6039 Msa1460220:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + tig0040757:6104-6123 Msa1460220:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + tig0040757:6105-6124 Msa1460220:intron 45.0%
AAAGAGGTAGAGGAAGACCT+AGG - tig0040757:6229-6248 Msa1460220:intergenic 45.0%
TCTTCTTACCACGGCATCTA+CGG + tig0040757:6277-6296 Msa1460220:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - tig0040757:6370-6389 Msa1460220:intergenic 45.0%
GACACCATTAGAGAGAGAGT+GGG - tig0040757:6371-6390 Msa1460220:intergenic 45.0%
TGACACCATTAGAGAGAGAG+TGG - tig0040757:6372-6391 Msa1460220:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - tig0040757:6450-6469 Msa1460220:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + tig0040757:6453-6472 Msa1460220:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - tig0040757:6489-6508 Msa1460220:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - tig0040757:6490-6509 Msa1460220:intergenic 45.0%
GTCGGCAATGTTGTATGGTA+CGG - tig0040757:6498-6517 Msa1460220:intergenic 45.0%
ATCAGGTCGGCAATGTTGTA+TGG - tig0040757:6503-6522 Msa1460220:intergenic 45.0%
AGTTCTATCGGACAGCAATC+AGG - tig0040757:6520-6539 Msa1460220:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + tig0040757:6565-6584 Msa1460220:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - tig0040757:6584-6603 Msa1460220:intergenic 45.0%
TCTTCTCCATTTCAACCACC+CGG + tig0040757:6589-6608 Msa1460220:intron 45.0%
ATCTCCAACTTTCACCTCCA+AGG + tig0040757:6706-6725 Msa1460220:intron 45.0%
TCTACCTTGGAGGTGAAAGT+TGG - tig0040757:6713-6732 Msa1460220:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - tig0040757:6863-6882 Msa1460220:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + tig0040757:6891-6910 Msa1460220:intron 45.0%
TGCCTATATTCGAGCTATCC+AGG - tig0040757:7059-7078 Msa1460220:intergenic 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - tig0040757:7101-7120 Msa1460220:intergenic 45.0%
TACCCTTTCCCATAACTCCA+TGG + tig0040757:7303-7322 Msa1460220:intron 45.0%
!! CAAAATCGGCTTGTAAGGTG+AGG - tig0040757:7404-7423 Msa1460220:intergenic 45.0%
TGACCAAACGATGTCTCTCT+TGG - tig0040757:7591-7610 Msa1460220:intergenic 45.0%
!! AACTCCAGCAGGGTCATTTT+CGG - tig0040757:7708-7727 Msa1460220:intergenic 45.0%
ATGGTTTAGCAACTCCAGCA+GGG - tig0040757:7718-7737 Msa1460220:intergenic 45.0%
TAGAAGACTGGGTTTCTGCA+AGG - tig0040757:7905-7924 Msa1460220:intergenic 45.0%
AGCCTCAAGAACTGTAAAGC+AGG + tig0040757:7951-7970 Msa1460220:CDS 45.0%
GACCTGCTTTACAGTTCTTG+AGG - tig0040757:7956-7975 Msa1460220:intergenic 45.0%
! ATGAAGTTTGCCCTGGTCTT+TGG + tig0040757:8106-8125 Msa1460220:intron 45.0%
GTATAACTGCTCCAAAGACC+AGG - tig0040757:8120-8139 Msa1460220:intergenic 45.0%
ACAAACACCTTTGCAGCACA+GGG - tig0040757:8461-8480 Msa1460220:intergenic 45.0%
GCCACATTCCTAATCTTGTG+AGG + tig0040757:8522-8541 Msa1460220:CDS 45.0%
CCCTCACAAGATTAGGAATG+TGG - tig0040757:8526-8545 Msa1460220:intergenic 45.0%
TTGGGGTTACCTACAATCTG+GGG + tig0040757:9872-9891 Msa1460220:intron 45.0%
AGTGCTAATCCCCAGATTGT+AGG - tig0040757:9884-9903 Msa1460220:intergenic 45.0%
! CGCATTGATCGTACCCAAAA+AGG - tig0040757:9940-9959 Msa1460220:intergenic 45.0%
TAGCACCCATTTAGAGAGAG+GGG - tig0040757:10056-10075 Msa1460220:intergenic 45.0%
CTTAGCACCCATTTAGAGAG+AGG - tig0040757:10058-10077 Msa1460220:intergenic 45.0%
! AGATGGCCTTGCACTTAAGA+AGG + tig0040757:10174-10193 Msa1460220:CDS 45.0%
CTCTCCTCTCTTATATCTGG+GGG + tig0040757:10243-10262 Msa1460220:intron 45.0%
! CGCCTGTTTTACTCTTCTTG+CGG + tig0040757:10439-10458 Msa1460220:intron 45.0%
! AGTGTTCACTCAGCAGGTTT+TGG + tig0040757:11060-11079 Msa1460220:CDS 45.0%
GACCATCTGATTCAATGCCT+TGG - tig0040757:11086-11105 Msa1460220:intergenic 45.0%
!! CAGTGCAGGAAAAGCATCAA+CGG - tig0040757:11239-11258 Msa1460220:intergenic 45.0%
CAACTCTGAACATGCCAGTA+TGG - tig0040757:11370-11389 Msa1460220:intergenic 45.0%
!! GTTGTTTCTGCAACGACAGA+GGG - tig0040757:11473-11492 Msa1460220:intergenic 45.0%
!! AGTTGTTTCTGCAACGACAG+AGG - tig0040757:11474-11493 Msa1460220:intergenic 45.0%
GTAAAACATCAGCTGCGGAA+AGG - tig0040757:11743-11762 Msa1460220:intergenic 45.0%
CTTTATTCTGAGTGCAGGTG+TGG + tig0040757:11762-11781 Msa1460220:intron 45.0%
TGTGGCGTATGCCAAAACTT+TGG + tig0040757:11780-11799 Msa1460220:intron 45.0%
GTGGCGTATGCCAAAACTTT+GGG + tig0040757:11781-11800 Msa1460220:intron 45.0%
CGTATGCCAAAACTTTGGGT+TGG + tig0040757:11785-11804 Msa1460220:intron 45.0%
TTGTTGAGGCGGTAACTACA+AGG - tig0040757:11987-12006 Msa1460220:intergenic 45.0%
AGTGCACTTTCCAGTTGTTG+AGG - tig0040757:12001-12020 Msa1460220:intergenic 45.0%
AACAAGCATGCCAATCTCAG+AGG + tig0040757:12022-12041 Msa1460220:intron 45.0%
TGGTTGGCATAAGAAGCAAG+GGG - tig0040757:12049-12068 Msa1460220:intergenic 45.0%
GTTGGTTGGCATAAGAAGCA+AGG - tig0040757:12051-12070 Msa1460220:intergenic 45.0%
CTGGGATATACTTGAGAAGC+TGG + tig0040757:12572-12591 Msa1460220:intron 45.0%
GCACGTGTGTTTCATTTGCA+AGG - tig0040757:12664-12683 Msa1460220:intergenic 45.0%
TCGATGAGCTCGTCAATTTC+TGG + tig0040757:12805-12824 Msa1460220:three_prime_UTR 45.0%
CGATGAGCTCGTCAATTTCT+GGG + tig0040757:12806-12825 Msa1460220:three_prime_UTR 45.0%
GATGAGCTCGTCAATTTCTG+GGG + tig0040757:12807-12826 Msa1460220:three_prime_UTR 45.0%
TCAATAAGCTGCATTCCGGT+TGG - tig0040757:12903-12922 Msa1460220:intergenic 45.0%
ATGCACGCCTTTGATTCAAC+CGG - tig0040757:12939-12958 Msa1460220:intergenic 45.0%
CTTGAAAGAGGCTCCAATCA+TGG - tig0040757:12989-13008 Msa1460220:intergenic 45.0%
! GAGCCTCTTTCAAGTGCTTA+AGG + tig0040757:12995-13014 Msa1460220:three_prime_UTR 45.0%
TACAGTCATGGAAGGAAGCT+GGG - tig0040757:13028-13047 Msa1460220:intergenic 45.0%
ATACAGTCATGGAAGGAAGC+TGG - tig0040757:13029-13048 Msa1460220:intergenic 45.0%
!! TTTGAAAAAAATATATATAT+CGG - tig0040757:5483-5502 Msa1460220:intergenic 5.0%
!! AAAATTAAATAGTTATAATT+GGG - tig0040757:8395-8414 Msa1460220:intergenic 5.0%
CCGTGATGCTCGAGTTAACA+AGG + tig0040757:485-504 Msa1460220:intron 50.0%
! GAAACGGGCAACTGAGTTGA+TGG - tig0040757:620-639 Msa1460220:intergenic 50.0%
TCAACTCAGTTGCCCGTTTC+AGG + tig0040757:620-639 Msa1460220:CDS 50.0%
CAACTCAGTTGCCCGTTTCA+GGG + tig0040757:621-640 Msa1460220:CDS 50.0%
AACTCAGTTGCCCGTTTCAG+GGG + tig0040757:622-641 Msa1460220:CDS 50.0%
CCGTTTCAGGGGAATCATCT+AGG + tig0040757:633-652 Msa1460220:CDS 50.0%
AGCAATCGCCTCATGACCAT+TGG - tig0040757:693-712 Msa1460220:intergenic 50.0%
GTCATGAGGCGATTGCTAAG+CGG + tig0040757:696-715 Msa1460220:CDS 50.0%
TCTCAAGCCTTGCTAGTGGT+GGG - tig0040757:991-1010 Msa1460220:intergenic 50.0%
CCTACTGGTCGAGTTACTGA+TGG - tig0040757:1016-1035 Msa1460220:intergenic 50.0%
CCATCAGTAACTCGACCAGT+AGG + tig0040757:1013-1032 Msa1460220:CDS 50.0%
AACCTGCGATTGACTGACGA+GGG - tig0040757:1041-1060 Msa1460220:intergenic 50.0%
TAACCTGCGATTGACTGACG+AGG - tig0040757:1042-1061 Msa1460220:intergenic 50.0%
GGGCAGAAACAGTCAAGGAT+TGG - tig0040757:1093-1112 Msa1460220:intergenic 50.0%
!! TCCTTGACTGTTTCTGCCCA+AGG + tig0040757:1094-1113 Msa1460220:CDS 50.0%
TCCTTGGGCAGAAACAGTCA+AGG - tig0040757:1098-1117 Msa1460220:intergenic 50.0%
! GTCGGATGGTGATGAAGAAG+TGG - tig0040757:1152-1171 Msa1460220:intergenic 50.0%
! CGCGTTTAGAATCAGCAGGA+AGG - tig0040757:1192-1211 Msa1460220:intergenic 50.0%
! GGATCGCGTTTAGAATCAGC+AGG - tig0040757:1196-1215 Msa1460220:intergenic 50.0%
ATTCTAAACGCGATCCACGC+CGG + tig0040757:1200-1219 Msa1460220:CDS 50.0%
CTTGCAACATGATGTGAGGC+AGG - tig0040757:1476-1495 Msa1460220:intergenic 50.0%
GGTGCTTGCAACATGATGTG+AGG - tig0040757:1480-1499 Msa1460220:intergenic 50.0%
!!! CCTCTGTTTTGGGACTAACC+CGG - tig0040757:1586-1605 Msa1460220:intergenic 50.0%
CCCAAAACAGAGGCTCTTGA+AGG + tig0040757:1593-1612 Msa1460220:CDS 50.0%
! CCCTTCAAGAGCCTCTGTTT+TGG - tig0040757:1597-1616 Msa1460220:intergenic 50.0%
GCCTGGAGATCACCAGATTA+TGG + tig0040757:1616-1635 Msa1460220:CDS 50.0%
GAATCAGTGGAATAGACCCC+GGG - tig0040757:1662-1681 Msa1460220:intergenic 50.0%
TGGATGTAAGGTGGAAGCTG+TGG - tig0040757:1827-1846 Msa1460220:intergenic 50.0%
GTGGGAACAGAGGAAGGTTT+GGG + tig0040757:2685-2704 Msa1460220:intron 50.0%
!! TGATTGGGTTGAAGCTGCGT+TGG + tig0040757:2896-2915 Msa1460220:intron 50.0%
!!! GGGGAGTTTTAAGCTGCCTA+TGG + tig0040757:2921-2940 Msa1460220:intron 50.0%
GGTAGCTTCACATTCCCCAT+AGG - tig0040757:2940-2959 Msa1460220:intergenic 50.0%
!! AGATGGGGTGTCACTATGGT+GGG + tig0040757:3016-3035 Msa1460220:intron 50.0%
!! TTTGGGTTCTGAGGCTCAAC+AGG + tig0040757:3350-3369 Msa1460220:intron 50.0%
!! TTGGGTTCTGAGGCTCAACA+GGG + tig0040757:3351-3370 Msa1460220:intron 50.0%
TTCCAGATTACCCACCAACG+AGG + tig0040757:3389-3408 Msa1460220:intron 50.0%
! AACCTCGTTGGTGGGTAATC+TGG - tig0040757:3394-3413 Msa1460220:intergenic 50.0%
TGAGCCAACTCCTTACCAAC+TGG + tig0040757:3457-3476 Msa1460220:intron 50.0%
!! TGGTCCAGTTGGTAAGGAGT+TGG - tig0040757:3464-3483 Msa1460220:intergenic 50.0%
! AGAGGTTGGTCCAGTTGGTA+AGG - tig0040757:3470-3489 Msa1460220:intergenic 50.0%
ACTCCTCCATTCCACACCTT+TGG + tig0040757:4300-4319 Msa1460220:intron 50.0%
! CTACCAAAGGTGTGGAATGG+AGG - tig0040757:4306-4325 Msa1460220:intergenic 50.0%
GACATTGAGCGTGTGACTCA+AGG + tig0040757:5231-5250 Msa1460220:CDS 50.0%
!!! AAGCAGCCTTGTCGGTTTTG+TGG - tig0040757:5291-5310 Msa1460220:intergenic 50.0%
CAAAACCGACAAGGCTGCTT+AGG + tig0040757:5291-5310 Msa1460220:CDS 50.0%
TTAGCTCGAATCTCGTCCTG+TGG - tig0040757:5695-5714 Msa1460220:intergenic 50.0%
TCGAGCTAAAGCTATTCGGC+TGG + tig0040757:5706-5725 Msa1460220:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG - tig0040757:6106-6125 Msa1460220:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + tig0040757:6103-6122 Msa1460220:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + tig0040757:6109-6128 Msa1460220:intron 50.0%
CTTCTTACCACGGCATCTAC+GGG + tig0040757:6278-6297 Msa1460220:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG + tig0040757:6364-6383 Msa1460220:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG - tig0040757:6369-6388 Msa1460220:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG - tig0040757:6422-6441 Msa1460220:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - tig0040757:6442-6461 Msa1460220:intergenic 50.0%
CTATCGGACAGCAATCAGGT+CGG - tig0040757:6516-6535 Msa1460220:intergenic 50.0%
TTCAAGCCGGGTGGTTGAAA+TGG - tig0040757:6598-6617 Msa1460220:intergenic 50.0%
ATCATCGTATTCAAGCCGGG+TGG - tig0040757:6607-6626 Msa1460220:intergenic 50.0%
AAGGAGAAGTGGGTCTACCT+TGG - tig0040757:6726-6745 Msa1460220:intergenic 50.0%
ACTCCGTCTTGCTTCTACTC+AGG + tig0040757:6768-6787 Msa1460220:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - tig0040757:6800-6819 Msa1460220:intergenic 50.0%
TAAACGGGAGGCTAGAGACT+TGG - tig0040757:6823-6842 Msa1460220:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - tig0040757:6838-6857 Msa1460220:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - tig0040757:6839-6858 Msa1460220:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - tig0040757:6852-6871 Msa1460220:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - tig0040757:6853-6872 Msa1460220:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + tig0040757:6954-6973 Msa1460220:intron 50.0%
AAGCCCCCTCATACATATCC+TGG + tig0040757:7038-7057 Msa1460220:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - tig0040757:7089-7108 Msa1460220:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - tig0040757:7090-7109 Msa1460220:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - tig0040757:7091-7110 Msa1460220:intergenic 50.0%
CTACTTACTTCGACGCGTGA+AGG - tig0040757:7200-7219 Msa1460220:intergenic 50.0%
!! ACTCCAGCAGGGTCATTTTC+GGG - tig0040757:7707-7726 Msa1460220:intergenic 50.0%
GATGGTTTAGCAACTCCAGC+AGG - tig0040757:7719-7738 Msa1460220:intergenic 50.0%
ATGGGCAAAGTCGAGAAGTG+TGG + tig0040757:8158-8177 Msa1460220:intron 50.0%
CAGGCACAAGCTCTCAATCT+TGG - tig0040757:8293-8312 Msa1460220:intergenic 50.0%
GACAAACACCTTTGCAGCAC+AGG - tig0040757:8462-8481 Msa1460220:intergenic 50.0%
CTAATCTTGTGAGGGCCCTA+GGG + tig0040757:8531-8550 Msa1460220:CDS 50.0%
! GTGCGGTGTGCATCTCATTT+TGG + tig0040757:9022-9041 Msa1460220:intron 50.0%
!! ACCAATTTTCCCCCGACTTG+TGG + tig0040757:9751-9770 Msa1460220:CDS 50.0%
TCCACAAGTCGGGGGAAAAT+TGG - tig0040757:9755-9774 Msa1460220:intergenic 50.0%
AATGGAAGGTCCACAAGTCG+GGG - tig0040757:9764-9783 Msa1460220:intergenic 50.0%
CAATGGAAGGTCCACAAGTC+GGG - tig0040757:9765-9784 Msa1460220:intergenic 50.0%
CCAATGGAAGGTCCACAAGT+CGG - tig0040757:9766-9785 Msa1460220:intergenic 50.0%
AGCACCCATTTAGAGAGAGG+GGG - tig0040757:10055-10074 Msa1460220:intergenic 50.0%
AGTGCAAGGCCATCTTTCTC+AGG - tig0040757:10169-10188 Msa1460220:intergenic 50.0%
GACGTGCCTTCTTAAGTGCA+AGG - tig0040757:10183-10202 Msa1460220:intergenic 50.0%
GGCCGCAAGAAGAGTAAAAC+AGG - tig0040757:10444-10463 Msa1460220:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - tig0040757:10641-10660 Msa1460220:intergenic 50.0%
ACGTACAGTGTTCACTCAGC+AGG + tig0040757:11054-11073 Msa1460220:CDS 50.0%
!! GGCCAAGGCATTGAATCAGA+TGG + tig0040757:11081-11100 Msa1460220:CDS 50.0%
CTCATGAAAAGCAGAGGCAG+CGG - tig0040757:11202-11221 Msa1460220:intergenic 50.0%
! CGTTGATGCTTTTCCTGCAC+TGG + tig0040757:11237-11256 Msa1460220:CDS 50.0%
TCTGCAACGACAGAGGGAAT+GGG - tig0040757:11467-11486 Msa1460220:intergenic 50.0%
TTCTGCAACGACAGAGGGAA+TGG - tig0040757:11468-11487 Msa1460220:intergenic 50.0%
!! CTAGGACTAAGGGAGTGTTC+GGG - tig0040757:11542-11561 Msa1460220:intergenic 50.0%
!! CCTAGGACTAAGGGAGTGTT+CGG - tig0040757:11543-11562 Msa1460220:intergenic 50.0%
GTAGTTACCGCCTCAACAAC+TGG + tig0040757:11988-12007 Msa1460220:intron 50.0%
GCACTTTCCAGTTGTTGAGG+CGG - tig0040757:11998-12017 Msa1460220:intergenic 50.0%
TGTTACGGCCCTTGAATCCT+TGG + tig0040757:12282-12301 Msa1460220:intron 50.0%
!! CGTCAATTTCTGGGGTTTCC+AGG + tig0040757:12815-12834 Msa1460220:three_prime_UTR 50.0%
TGCACGCCTTTGATTCAACC+GGG - tig0040757:12938-12957 Msa1460220:intergenic 50.0%
AAGAGGCTCCAATCATGGAG+AGG - tig0040757:12984-13003 Msa1460220:intergenic 50.0%
AGCTGCATCGCCTGCATTCA+TGG - tig0040757:412-431 Msa1460220:intergenic 55.0%
TCAAGCCTTGCTAGTGGTGG+GGG - tig0040757:989-1008 Msa1460220:intergenic 55.0%
CTCAAGCCTTGCTAGTGGTG+GGG - tig0040757:990-1009 Msa1460220:intergenic 55.0%
CTCTCAAGCCTTGCTAGTGG+TGG - tig0040757:992-1011 Msa1460220:intergenic 55.0%
GGACTCTCAAGCCTTGCTAG+TGG - tig0040757:995-1014 Msa1460220:intergenic 55.0%
TGACTGACGAGGGAACCTAC+TGG - tig0040757:1031-1050 Msa1460220:intergenic 55.0%
TTCCCTCGTCAGTCAATCGC+AGG + tig0040757:1036-1055 Msa1460220:CDS 55.0%
TTCTAAACGCGATCCACGCC+GGG + tig0040757:1201-1220 Msa1460220:CDS 55.0%
! CAAGCAGATTTTACCCGGCG+TGG - tig0040757:1217-1236 Msa1460220:intergenic 55.0%
!!! GTTTTGGGACTAACCCGGTC+AGG - tig0040757:1581-1600 Msa1460220:intergenic 55.0%
!! CCGGGTTAGTCCCAAAACAG+AGG + tig0040757:1583-1602 Msa1460220:CDS 55.0%
AAGCTGTGGCAACTCCAGAC+AGG - tig0040757:1813-1832 Msa1460220:intergenic 55.0%
CGTGGGAACAGAGGAAGGTT+TGG + tig0040757:2684-2703 Msa1460220:intron 55.0%
! TGGGTTGAAGCTGCGTTGGT+TGG + tig0040757:2900-2919 Msa1460220:intron 55.0%
!! GGGTTGAAGCTGCGTTGGTT+GGG + tig0040757:2901-2920 Msa1460220:intron 55.0%
!! GGTTGAAGCTGCGTTGGTTG+GGG + tig0040757:2902-2921 Msa1460220:intron 55.0%
!! GAGATGGGGTGTCACTATGG+TGG + tig0040757:3015-3034 Msa1460220:intron 55.0%
GGTGTCAGAACCTCGTTGGT+GGG - tig0040757:3402-3421 Msa1460220:intergenic 55.0%
!! TGTCGGTGTCAGAACCTCGT+TGG - tig0040757:3406-3425 Msa1460220:intergenic 55.0%
GTGGGTTCAACTCCTGCTGT+CGG - tig0040757:3423-3442 Msa1460220:intergenic 55.0%
GAGTTGAACCCACGCTCTTG+CGG + tig0040757:3430-3449 Msa1460220:intron 55.0%
AGTTGAACCCACGCTCTTGC+GGG + tig0040757:3431-3450 Msa1460220:intron 55.0%
! CCAACAGAGGTTGGTCCAGT+TGG - tig0040757:3475-3494 Msa1460220:intergenic 55.0%
CCAACTGGACCAACCTCTGT+TGG + tig0040757:3472-3491 Msa1460220:intron 55.0%
TCTGGAAGACCACTGGCGAA+AGG + tig0040757:3719-3738 Msa1460220:CDS 55.0%
GAGTCACACGCTCAATGTCG+CGG - tig0040757:5230-5249 Msa1460220:intergenic 55.0%
!! CTCAAGGCCTTGGTGCTATC+TGG + tig0040757:5247-5266 Msa1460220:CDS 55.0%
GGTCGTCCACAAAACCGACA+AGG + tig0040757:5282-5301 Msa1460220:CDS 55.0%
GGATGAACAGCACACTGCCA+TGG - tig0040757:5674-5693 Msa1460220:intergenic 55.0%
! GCAGTGTGCTGTTCATCCAC+AGG + tig0040757:5676-5695 Msa1460220:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - tig0040757:6111-6130 Msa1460220:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - tig0040757:6117-6136 Msa1460220:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - tig0040757:6118-6137 Msa1460220:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + tig0040757:6117-6136 Msa1460220:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - tig0040757:6430-6449 Msa1460220:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - tig0040757:6486-6505 Msa1460220:intergenic 55.0%
GAGAAGTGGGTCTACCTTGG+AGG - tig0040757:6723-6742 Msa1460220:intergenic 55.0%
CCGCCTGAGTAGAAGCAAGA+CGG - tig0040757:6774-6793 Msa1460220:intergenic 55.0%
CCGTCTTGCTTCTACTCAGG+CGG + tig0040757:6771-6790 Msa1460220:intron 55.0%
GCGGAAGCCATACGCTTCTA+AGG + tig0040757:6790-6809 Msa1460220:intron 55.0%
TAGTGTGAGGACGCAGGATG+GGG - tig0040757:7014-7033 Msa1460220:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - tig0040757:7015-7034 Msa1460220:intergenic 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - tig0040757:7016-7035 Msa1460220:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - tig0040757:7020-7039 Msa1460220:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + tig0040757:7080-7099 Msa1460220:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + tig0040757:7081-7100 Msa1460220:intron 55.0%
CGTGAAGGAGCGATATCGGA+CGG - tig0040757:7185-7204 Msa1460220:intergenic 55.0%
GACGCGTGAAGGAGCGATAT+CGG - tig0040757:7189-7208 Msa1460220:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - tig0040757:7230-7249 Msa1460220:intergenic 55.0%
AGACGGAAAGCGGACAGTTC+AGG - tig0040757:8312-8331 Msa1460220:intergenic 55.0%
CCTAGGGCCCTCACAAGATT+AGG - tig0040757:8533-8552 Msa1460220:intergenic 55.0%
CCTAATCTTGTGAGGGCCCT+AGG + tig0040757:8530-8549 Msa1460220:CDS 55.0%
GTCATCGCTCTCCAAAACGG+AGG + tig0040757:8912-8931 Msa1460220:CDS 55.0%
ATGGAAGGTCCACAAGTCGG+GGG - tig0040757:9763-9782 Msa1460220:intergenic 55.0%
! CCGACTTGTGGACCTTCCAT+TGG + tig0040757:9763-9782 Msa1460220:CDS 55.0%
GGCACTTGCCCACATACTAC+AGG + tig0040757:9799-9818 Msa1460220:CDS 55.0%
ATTTAGAGAGAGGGGGGACG+GGG - tig0040757:10048-10067 Msa1460220:intergenic 55.0%
CATTTAGAGAGAGGGGGGAC+GGG - tig0040757:10049-10068 Msa1460220:intergenic 55.0%
CCATTTAGAGAGAGGGGGGA+CGG - tig0040757:10050-10069 Msa1460220:intergenic 55.0%
CGTCCCCCCTCTCTCTAAAT+GGG + tig0040757:10048-10067 Msa1460220:intron 55.0%
GCACCCATTTAGAGAGAGGG+GGG - tig0040757:10054-10073 Msa1460220:intergenic 55.0%
TGGCAGGGTTCAGCTCATAC+AGG + tig0040757:10094-10113 Msa1460220:intron 55.0%
TAATGCTACTCCCTCCGTCC+CGG + tig0040757:10624-10643 Msa1460220:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - tig0040757:10637-10656 Msa1460220:intergenic 55.0%
!! CACTCAGCAGGTTTTGGCCA+AGG + tig0040757:11066-11085 Msa1460220:CDS 55.0%
CTGCAACGACAGAGGGAATG+GGG - tig0040757:11466-11485 Msa1460220:intergenic 55.0%
CCGAACACTCCCTTAGTCCT+AGG + tig0040757:11540-11559 Msa1460220:intron 55.0%
! CAGCTGCGGAAAGGCCTTAT+TGG - tig0040757:11734-11753 Msa1460220:intergenic 55.0%
!! AGCAAGGGGACCTCTGAGAT+TGG - tig0040757:12035-12054 Msa1460220:intergenic 55.0%
GGGTTTCCAGGCAACTAACG+TGG + tig0040757:12827-12846 Msa1460220:three_prime_UTR 55.0%
GGGTTTCCACGTTAGTTGCC+TGG - tig0040757:12836-12855 Msa1460220:intergenic 55.0%
AGTCATGGAAGGAAGCTGGG+TGG - tig0040757:13025-13044 Msa1460220:intergenic 55.0%
AGCCTGCGAGCCATGAATGC+AGG + tig0040757:399-418 Msa1460220:CDS 60.0%
TGCAGGCGATGCAGCTGATC+AGG + tig0040757:416-435 Msa1460220:CDS 60.0%
CGTGGAGCGATAACTCCTGG+AGG + tig0040757:1377-1396 Msa1460220:CDS 60.0%
ACTGAGACAGCTGCTCCTCC+AGG - tig0040757:1395-1414 Msa1460220:intergenic 60.0%
TCCTGGAACTGGAGGGCCTT+CGG - tig0040757:1558-1577 Msa1460220:intergenic 60.0%
GGTCAGGTCCTGGAACTGGA+GGG - tig0040757:1565-1584 Msa1460220:intergenic 60.0%
CTCCAGTTCCAGGACCTGAC+CGG + tig0040757:1564-1583 Msa1460220:CDS 60.0%
TCCAGTTCCAGGACCTGACC+GGG + tig0040757:1565-1584 Msa1460220:CDS 60.0%
ACAGAGGCTCTTGAAGGGCC+TGG + tig0040757:1599-1618 Msa1460220:CDS 60.0%
!! AAAGCATCGGGTGGGGATGC+TGG + tig0040757:2538-2557 Msa1460220:intron 60.0%
!! AAGCATCGGGTGGGGATGCT+GGG + tig0040757:2539-2558 Msa1460220:intron 60.0%
GCTGTCGTGGGAACAGAGGA+AGG + tig0040757:2679-2698 Msa1460220:intron 60.0%
! TCTGAGGCTCAACAGGGCCA+AGG + tig0040757:3357-3376 Msa1460220:intron 60.0%
! CGGTGTCAGAACCTCGTTGG+TGG - tig0040757:3403-3422 Msa1460220:intergenic 60.0%
! GAGGTTCTGACACCGACAGC+AGG + tig0040757:3408-3427 Msa1460220:intron 60.0%
GTTGAACCCACGCTCTTGCG+GGG + tig0040757:3432-3451 Msa1460220:intron 60.0%
! CTCATACCCCGCAAGAGCGT+GGG - tig0040757:3441-3460 Msa1460220:intergenic 60.0%
!! GAAGAGGCACCTTTCGCCAG+TGG - tig0040757:3731-3750 Msa1460220:intergenic 60.0%
GAGCGTGTGACTCAAGGCCT+TGG + tig0040757:5237-5256 Msa1460220:CDS 60.0%
GAGAAGACCCGTAGATGCCG+TGG - tig0040757:6288-6307 Msa1460220:intergenic 60.0%
ACGGGAGGCTAGAGACTTGG+AGG - tig0040757:6820-6839 Msa1460220:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - tig0040757:6835-6854 Msa1460220:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - tig0040757:6849-6868 Msa1460220:intergenic 60.0%
AGGGGGCTTCGACTAGTGTG+AGG - tig0040757:7027-7046 Msa1460220:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - tig0040757:7084-7103 Msa1460220:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + tig0040757:7223-7242 Msa1460220:intron 60.0%
GAGCCCGAAAATGACCCTGC+TGG + tig0040757:7701-7720 Msa1460220:CDS 60.0%
ACCACGTCCCTGTGCTGCAA+AGG + tig0040757:8451-8470 Msa1460220:intron 60.0%
ACCTTTGCAGCACAGGGACG+TGG - tig0040757:8455-8474 Msa1460220:intergenic 60.0%
CCGTCCCCCCTCTCTCTAAA+TGG + tig0040757:10047-10066 Msa1460220:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - tig0040757:10638-10657 Msa1460220:intergenic 60.0%
CGCCTGCATTCATGGCTCGC+AGG - tig0040757:404-423 Msa1460220:intergenic 65.0%
!! GCTAGTGGTGGGGGTGCCTT+AGG - tig0040757:980-999 Msa1460220:intergenic 65.0%
AGGCACCCCCACCACTAGCA+AGG + tig0040757:981-1000 Msa1460220:CDS 65.0%
ACCCTCGTCGCCTTGATCCG+CGG + tig0040757:1354-1373 Msa1460220:CDS 65.0%
GGAGTTATCGCTCCACGCCG+CGG - tig0040757:1374-1393 Msa1460220:intergenic 65.0%
CGGCGTGGAGCGATAACTCC+TGG + tig0040757:1374-1393 Msa1460220:CDS 65.0%
TCCGAAGGCCCTCCAGTTCC+AGG + tig0040757:1554-1573 Msa1460220:CDS 65.0%
CGGTCAGGTCCTGGAACTGG+AGG - tig0040757:1566-1585 Msa1460220:intergenic 65.0%
ACCCGGTCAGGTCCTGGAAC+TGG - tig0040757:1569-1588 Msa1460220:intergenic 65.0%
GGACTAACCCGGTCAGGTCC+TGG - tig0040757:1575-1594 Msa1460220:intergenic 65.0%
TGGGGCTGTCGTGGGAACAG+AGG + tig0040757:2675-2694 Msa1460220:intron 65.0%
GCTCATACCCCGCAAGAGCG+TGG - tig0040757:3442-3461 Msa1460220:intergenic 65.0%
!! GTGGTGGGGGTGCCTTAGGC+AGG - tig0040757:976-995 Msa1460220:intergenic 70.0%
GCCGCGGATCAAGGCGACGA+GGG - tig0040757:1358-1377 Msa1460220:intergenic 70.0%
TCGCTCCACGCCGCGGATCA+AGG - tig0040757:1367-1386 Msa1460220:intergenic 70.0%
CGCCGCGGATCAAGGCGACG+AGG - tig0040757:1359-1378 Msa1460220:intergenic 75.0%
CGTCGCCTTGATCCGCGGCG+TGG + tig0040757:1359-1378 Msa1460220:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0040757 gene 378 13319 378 ID=Msa1460220;Name=Msa1460220
tig0040757 mRNA 378 13319 378 ID=Msa1460220-mRNA-1;Parent=Msa1460220;Name=Msa1460220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.83|0.84|1|1|1|19|565|967
tig0040757 exon 378 437 378 ID=Msa1460220-mRNA-1:exon:22620;Parent=Msa1460220-mRNA-1
tig0040757 exon 608 1222 608 ID=Msa1460220-mRNA-1:exon:22621;Parent=Msa1460220-mRNA-1
tig0040757 exon 1353 1976 1353 ID=Msa1460220-mRNA-1:exon:22622;Parent=Msa1460220-mRNA-1
tig0040757 exon 3675 3740 3675 ID=Msa1460220-mRNA-1:exon:22623;Parent=Msa1460220-mRNA-1
tig0040757 exon 4866 4979 4866 ID=Msa1460220-mRNA-1:exon:22624;Parent=Msa1460220-mRNA-1
tig0040757 exon 5081 5326 5081 ID=Msa1460220-mRNA-1:exon:22625;Parent=Msa1460220-mRNA-1
tig0040757 exon 5680 5727 5680 ID=Msa1460220-mRNA-1:exon:22626;Parent=Msa1460220-mRNA-1
tig0040757 exon 5815 5955 5815 ID=Msa1460220-mRNA-1:exon:22627;Parent=Msa1460220-mRNA-1
tig0040757 exon 7662 7814 7662 ID=Msa1460220-mRNA-1:exon:22628;Parent=Msa1460220-mRNA-1
tig0040757 exon 7910 7972 7910 ID=Msa1460220-mRNA-1:exon:22629;Parent=Msa1460220-mRNA-1
tig0040757 exon 8512 8622 8512 ID=Msa1460220-mRNA-1:exon:22630;Parent=Msa1460220-mRNA-1
tig0040757 exon 8714 8797 8714 ID=Msa1460220-mRNA-1:exon:22631;Parent=Msa1460220-mRNA-1
tig0040757 exon 8886 8933 8886 ID=Msa1460220-mRNA-1:exon:22632;Parent=Msa1460220-mRNA-1
tig0040757 exon 9746 9820 9746 ID=Msa1460220-mRNA-1:exon:22633;Parent=Msa1460220-mRNA-1
tig0040757 exon 10100 10216 10100 ID=Msa1460220-mRNA-1:exon:22634;Parent=Msa1460220-mRNA-1
tig0040757 exon 11022 11102 11022 ID=Msa1460220-mRNA-1:exon:22635;Parent=Msa1460220-mRNA-1
tig0040757 exon 11187 11258 11187 ID=Msa1460220-mRNA-1:exon:22636;Parent=Msa1460220-mRNA-1
tig0040757 exon 11654 11724 11654 ID=Msa1460220-mRNA-1:exon:22637;Parent=Msa1460220-mRNA-1
tig0040757 exon 12640 13319 12640 ID=Msa1460220-mRNA-1:exon:22638;Parent=Msa1460220-mRNA-1
tig0040757 CDS 378 437 378 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 608 1222 608 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 1353 1976 1353 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 3675 3740 3675 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 4866 4979 4866 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 5081 5326 5081 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 5680 5727 5680 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 5815 5955 5815 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 7662 7814 7662 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 7910 7972 7910 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 8512 8622 8512 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 8714 8797 8714 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 8886 8933 8886 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 9746 9820 9746 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 10100 10216 10100 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 11022 11102 11022 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 11187 11258 11187 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 11654 11724 11654 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 CDS 12640 12754 12640 ID=Msa1460220-mRNA-1:cds;Parent=Msa1460220-mRNA-1
tig0040757 three_prime_UTR 12755 13319 12755 ID=Msa1460220-mRNA-1:three_prime_utr;Parent=Msa1460220-mRNA-1
Gene Sequence

>Msa1460220

TCAAGAGAAAGACTGATAAGGAGCCTGCGAGCCATGAATGCAGGCGATGCAGCTGATCAGGATGATCAACCATCAACTCAGTTGCCCGTTTCAGGGGAATCATCTAGGAAAAGACCTGTTCCTCATGATAATGAACAATTGGCCAATGGTCATGAGGCGATTGCTAAGCGGATTCGTTCTGGTCCTGACTCTGACTTTACTTCACCTGCTCAAGCTAATGATTCTGGGAGGGATCATAGCTCCGTTAACGGAGTGTCACCTAATGTTCCTGTTTTGGAAAGTGAACTAACTGCTGTGGAGCAAATGATTGCCGTTATTGGTGCTTTGATTGCTGAAGGAGAAAGAGGCGCCAAATCTCTTGAAATACTTATATCACAGATTCATCCTGATCTATTGGCTGATATTGTCATAGCTAATATGAAGCACCTGCCTAAGGCACCCCCACCACTAGCAAGGCTTGAGAGTCCATCAGTAACTCGACCAGTAGGTTCCCTCGTCAGTCAATCGCAGGTTATAACAACATCTGCTTCAATGAGTTCTGTCCAATCCTTGACTGTTTCTGCCCAAGGACAAGTCCCTTCAACTACAGCCATTTCTACTGCCACTTCTTCATCACCATCCGACACATCTAATTTCAGTAACCTTCCTGCTGATTCTAAACGCGATCCACGCCGGGACCCTCGTCGCCTTGATCCGCGGCGTGGAGCGATAACTCCTGGAGGAGCAGCTGTCTCAGTTACAGACGATACTGCGGCCACACATTTAGAATCTGAGGATCCCGTGTCTTTAATTAAACCTGCCTCACATCATGTTGCAAGCACCGATGACGATATCCAATCAAATTTAACAATCAAAATAGAAAATGATGACATGATCTCCGAAGGCCCTCCAGTTCCAGGACCTGACCGGGTTAGTCCCAAAACAGAGGCTCTTGAAGGGCCTGGAGATCACCAGATTATGGAAGCAAATGCTTCTATGGATCCCGGGGTCTATTCCACTGATTCAAAAGATGAGAATCTGAGTACAGCAAATCTTTTGGACGATAATGAAACAAATGGGATAGATTCATCATCTATTTTAGAGTTTGATCAGTTTTCTGTTGACGTACAAGTGTCACCCACATCAGAAGATACCTGTCTGGAGTTGCCACAGCTTCCACCTTACATCCAACTATCCCAAGAACAGGAAAGTAAGGTGAAACACATGGCTATTAGCCACATAATAGAGTCATACAATCATTTGCAAGGGGCTGATTGTCAACAGTTTTGCATGCCACTACTAGCTAGACTTGTAGCTCAGATTGATAACGATAATGTGATCATTACGATGCTGCAAAAACACATTCTGGAAGACCACTGGCGAAAGGGGCATGAACTTGTTCTGCATGTCCTGTACCATCTTCACTCCTTGATGATATTGGATTCAGCAGGAAACACTTCATTTTCTGCTGTTTTATATGATAACTTTCTCTTGGGAGTGGCCAAAACTGTATTGGATTCTTTTCCAGCTTCAGACAAGTCTTTTAGCAAACTTCTTGGTGAAGTTCCATTTCTGCCTGAATCTGCCTTGAAGATTTTGGATGATCTATGCTATTCTGATGTTGTTGATCACGATGGAAAAATTATCCGCGACATTGAGCGTGTGACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGTCGTCCACAAAACCGACAAGGCTGCTTAGGAATAGCATTGAAGTGTGCTGTTCATCCACAGGACGAGATTCGAGCTAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAGTTACATAGCTGAAGATGTTGAGAAATTTGCGACAAAAATGCTTCTCTCTGCAGTAGATCACGAAGTTTCAAATGCAGCGCAATCTGGACCTACTGAACAAAGAACAGAGGCACAGGTCGAAAGTCTTGAAATAAGTGGTACTTCACAGGTTAAAGAGCCCGAAAATGACCCTGCTGGAGTTGCTAAACCATCAAGTCAAAGTGTTTCATCTATATCGTTTTCTGAGGCACAACGCCTCATTTCTTTATTTTTTGCTCTATGTACAAAGAAACCCAGTCTTCTACAGATTGTATTTGATGTCTATGGGCAAGCCTCAAGAACTGTAAAGCAGGCTTTTCATCGCCACATTCCTAATCTTGTGAGGGCCCTAGGGCAATCTTATTCTGAATTGCTCCATATCATATCTGATCCACCAAAAGGAAGTGAAAATCTTCTGACACTGGTGCTGCAAATATTGACTCAAGACACAACACCATCTTCTGATTTGATATCTACCGTTAAACATTTATATGAAACCAAGTTTAGAGATGTTACAATTCTTGTTCCATTATTGTCATCGCTCTCCAAAACGGAGGTTTTACCAATTTTCCCCCGACTTGTGGACCTTCCATTGGAAAAGTTTCAAAGGGCACTTGCCCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTTTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCCTTGCACTTAAGAAGGCACGTCTTCTATCATTTTATATAACAGATGCTTGCTCAGCTTGTTTTGAACAACGTACAGTGTTCACTCAGCAGGTTTTGGCCAAGGCATTGAATCAGATGGTTGATCAAACACCGCTGCCTCTGCTTTTCATGAGAACAATTATTCAGGCCGTTGATGCTTTTCCTGCACTGGTTGATTTTGTCATGGAGATACTCTCAAAACTTGTGACCAAACAGGTATGCTTACTTAATCTTGAATTCAGATCAACTTTAGTTGTTCTCGGCCTTGCAAATGAAACACACGTGCAGCAACATTTACCGACATCATTGCACCATTCTGAGACAAGTACTTCAGTTAGTGGGGCAACTCTGACATGA
Protein sequence

>Msa1460220

SRERLIRSLRAMNAGDAADQDDQPSTQLPVSGESSRKRPVPHDNEQLANGHEAIAKRIRSGPDSDFTSPAQANDSGRDHSSVNGVSPNVPVLESELTAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKAPPPLARLESPSVTRPVGSLVSQSQVITTSASMSSVQSLTVSAQGQVPSTTAISTATSSSPSDTSNFSNLPADSKRDPRRDPRRLDPRRGAITPGGAAVSVTDDTAATHLESEDPVSLIKPASHHVASTDDDIQSNLTIKIENDDMISEGPPVPGPDRVSPKTEALEGPGDHQIMEANASMDPGVYSTDSKDENLSTANLLDDNETNGIDSSSILEFDQFSVDVQVSPTSEDTCLELPQLPPYIQLSQEQESKVKHMAISHIIESYNHLQGADCQQFCMPLLARLVAQIDNDNVIITMLQKHILEDHWRKGHELVLHVLYHLHSLMILDSAGNTSFSAVLYDNFLLGVAKTVLDSFPASDKSFSKLLGEVPFLPESALKILDDLCYSDVVDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQGCLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVEKFATKMLLSAVDHEVSNAAQSGPTEQRTEAQVESLEISGTSQVKEPENDPAGVAKPSSQSVSSISFSEAQRLISLFFALCTKKPSLLQIVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQILTQDTTPSSDLISTVKHLYETKFRDVTILVPLLSSLSKTEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKARLLSFYITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTIIQAVDAFPALVDFVMEILSKLVTKQVCLLNLEFRSTLVVLGLANETHVQQHLPTSLHHSETSTSVSGATLT*