Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462010 | XP_003591309.1 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462010 | sp|Q9M1R1|LCYD1_ARATH | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462010 | G7IBQ9 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1356820 | Msa1462010 | 0.985363 | 2.475024e-163 | -8.615850e-47 |
| Msa1422900 | Msa1462010 | 0.807221 | 5.618741e-50 | -8.615850e-47 |
| Msa1198870 | Msa1462010 | 0.808701 | 2.721294e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462010 | MtrunA17_Chr1g0193981 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Msa1462010 | MtrunA17_Chr7g0271361 | 60.179 | 447 | 165 | 4 | 10 | 450 | 16 | 455 | 0.0 | 563 |
| Msa1462010 | MtrunA17_Chr1g0193181 | 58.036 | 448 | 176 | 5 | 5 | 448 | 4 | 443 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462010 | AT3G62130.1 | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Msa1462010 | AT3G62130.2 | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Msa1462010 | AT5G26600.1 | 60.179 | 447 | 164 | 4 | 10 | 448 | 33 | 473 | 0.0 | 530 |
| Msa1462010 | AT5G26600.2 | 60.179 | 447 | 164 | 4 | 10 | 448 | 33 | 473 | 0.0 | 530 |
Find 133 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGTATGGTTGTGAAAA+TGG | 0.157149 | tig0041855:-751 | Msa1462010:CDS |
| ATGTTAGTAATTTGTATAAA+TGG | 0.173706 | tig0041855:-992 | Msa1462010:CDS |
| GCTTGTGGTGCCGTCGATTA+TGG | 0.241155 | tig0041855:-823 | Msa1462010:CDS |
| TGAGGTTGAATTACCGTTTC+CGG | 0.253269 | tig0041855:-1255 | Msa1462010:CDS |
| GACTGCAATTATTCAGCTTT+TGG | 0.256976 | tig0041855:-442 | Msa1462010:CDS |
| TTCCGGTTAGGGAATTGATT+AGG | 0.279390 | tig0041855:-1112 | Msa1462010:CDS |
| TGAAGTTCCTGTGTATTATC+AGG | 0.286901 | tig0041855:-574 | Msa1462010:CDS |
| AGCGGAGCTGCCAGGTGGTT+TGG | 0.290209 | tig0041855:+1558 | Msa1462010:intergenic |
| AATGTTGATGTTAAGGAAAT+TGG | 0.294275 | tig0041855:-1026 | Msa1462010:CDS |
| ACACTGTTGATGATTATAAT+AGG | 0.298624 | tig0041855:-470 | Msa1462010:CDS |
| GCGGAGCTGCCAGGTGGTTT+GGG | 0.312446 | tig0041855:+1559 | Msa1462010:intergenic |
| GTTGATGGTGCTCATGCTTT+AGG | 0.316255 | tig0041855:-1056 | Msa1462010:CDS |
| TGATTATTCAGTCACTCTTT+AGG | 0.324233 | tig0041855:+393 | Msa1462010:intergenic |
| GATAAGGATGGGTTTATAAC+TGG | 0.327185 | tig0041855:-522 | Msa1462010:CDS |
| ATCATACTCGCACACATTTC+AGG | 0.329450 | tig0041855:+684 | Msa1462010:intergenic |
| TCCGGTTAGGGAATTGATTA+GGG | 0.334111 | tig0041855:-1111 | Msa1462010:CDS |
| CGACGTCATCGGCATTGATT+AGG | 0.342101 | tig0041855:+1459 | Msa1462010:intergenic |
| AAATTATAACACTGTCATTT+CGG | 0.342626 | tig0041855:+1348 | Msa1462010:intergenic |
| AGATTAACGGTGGGAGAGTT+AGG | 0.343995 | tig0041855:-1178 | Msa1462010:CDS |
| TGGTTTGCCTTCAAAGATTC+GGG | 0.346535 | tig0041855:-655 | Msa1462010:CDS |
| AAGTTTGAATGTTGATGTTA+AGG | 0.365457 | tig0041855:-1033 | Msa1462010:CDS |
| ATTTCCTCGTTGGAATTAAC+CGG | 0.370491 | tig0041855:+1236 | Msa1462010:intergenic |
| CAAGCGTGGGGTACAAATCT+TGG | 0.376935 | tig0041855:-714 | Msa1462010:CDS |
| ATGATGATGCTTCGAGGTTA+AGG | 0.380388 | tig0041855:-623 | Msa1462010:CDS |
| TTCAGTTGTTATTCCGGTTA+GGG | 0.382319 | tig0041855:-1123 | Msa1462010:CDS |
| TTGGTTTGCCTTCAAAGATT+CGG | 0.383079 | tig0041855:-656 | Msa1462010:CDS |
| CTTCAGTTGTTATTCCGGTT+AGG | 0.388055 | tig0041855:-1124 | Msa1462010:CDS |
| GTGCGACGGCGGTTTGGTGG+TGG | 0.388236 | tig0041855:+1630 | Msa1462010:intergenic |
| CCGGTGGTGGCGCATGAGTA+TGG | 0.390433 | tig0041855:-900 | Msa1462010:CDS |
| GTTTGCCTGCTGAGAGTGCT+TGG | 0.391339 | tig0041855:-872 | Msa1462010:CDS |
| GGCTGAACGGTGCCGTTTCG+AGG | 0.394109 | tig0041855:+1716 | Msa1462010:intergenic |
| CTGCTGAGAGTGCTTGGGTT+GGG | 0.396233 | tig0041855:-866 | Msa1462010:CDS |
| GTCATTTCGGCAGAACTTAC+CGG | 0.396727 | tig0041855:+1361 | Msa1462010:intergenic |
| AAGAAGTTCGTGTGAGGAAA+TGG | 0.397728 | tig0041855:+1664 | Msa1462010:intergenic |
| ACCCTAATCAATTCCCTAAC+CGG | 0.397893 | tig0041855:+1110 | Msa1462010:intergenic |
| GATGCCTTCAGTTGTTATTC+CGG | 0.407025 | tig0041855:-1129 | Msa1462010:CDS |
| TTATGTGAGGATTTCTCATC+AGG | 0.407288 | tig0041855:-499 | Msa1462010:CDS |
| CGGTTTGAAGGTGGAATTGA+AGG | 0.407550 | tig0041855:-789 | Msa1462010:CDS |
| CGAATCAACAACGGCAGCTT+CGG | 0.409299 | tig0041855:-1608 | Msa1462010:CDS |
| GGTGGTTTGGGCGGTGAGGA+TGG | 0.410822 | tig0041855:+1571 | Msa1462010:intergenic |
| CGAAATTTCTTCGACGTCAT+CGG | 0.417067 | tig0041855:+1448 | Msa1462010:intergenic |
| GAAATGGAGTGAGTGAGTTT+TGG | 0.421190 | tig0041855:+1680 | Msa1462010:intergenic |
| AACGATGGCAGCAGCGGTGG+TGG | 0.434975 | tig0041855:+1412 | Msa1462010:intergenic |
| CATGGTATGGTTGTGAAAAT+GGG | 0.436733 | tig0041855:-750 | Msa1462010:CDS |
| CTCATCACCCGAATCTTTGA+AGG | 0.440821 | tig0041855:+648 | Msa1462010:intergenic |
| TTTGCCTGCTGAGAGTGCTT+GGG | 0.445854 | tig0041855:-871 | Msa1462010:CDS |
| CCTGCTGAGAGTGCTTGGGT+TGG | 0.453877 | tig0041855:-867 | Msa1462010:CDS |
| TGATTCGTGCGACGGCGGTT+TGG | 0.456057 | tig0041855:+1624 | Msa1462010:intergenic |
| TTTGGGCGGTGAGGATGGAG+CGG | 0.462678 | tig0041855:+1576 | Msa1462010:intergenic |
| TTGGGCGGTGAGGATGGAGC+GGG | 0.468335 | tig0041855:+1577 | Msa1462010:intergenic |
| GCCATCGTTCTTCAACAAAT+CGG | 0.471082 | tig0041855:-1398 | Msa1462010:CDS |
| TGCGACGGCGGTTTGGTGGT+GGG | 0.473641 | tig0041855:+1631 | Msa1462010:intergenic |
| ATTGAAGGAGGGAAGATTAA+CGG | 0.474227 | tig0041855:-1191 | Msa1462010:CDS |
| ATTATCGCGGAGTTTAAGAA+AGG | 0.474569 | tig0041855:-1215 | Msa1462010:CDS |
| ATTGATTAGGGTTTGTAGAG+AGG | 0.478025 | tig0041855:-1099 | Msa1462010:CDS |
| TGTGCGAGTATGATTATGAT+TGG | 0.478342 | tig0041855:-675 | Msa1462010:CDS |
| TATTATCAGGCTTTGAGAAA+TGG | 0.484635 | tig0041855:-561 | Msa1462010:CDS |
| GCCGTTGTTGATTCGTGCGA+CGG | 0.484870 | tig0041855:+1616 | Msa1462010:intergenic |
| AAGCGTGGGGTACAAATCTT+GGG | 0.486188 | tig0041855:-713 | Msa1462010:CDS |
| GGTTTGTAGAGAGGAAGAAG+TGG | 0.491671 | tig0041855:-1090 | Msa1462010:CDS |
| TGGGCGGTGAGGATGGAGCG+GGG | 0.491672 | tig0041855:+1578 | Msa1462010:intergenic |
| TGTCGGTGGCTCTGTTATTG+AGG | 0.492187 | tig0041855:-1273 | Msa1462010:CDS |
| GGCTTTGAGAAATGGTGAAA+GGG | 0.495516 | tig0041855:-553 | Msa1462010:CDS |
| TTTAAGAAAGGGATTGAAGG+AGG | 0.501661 | tig0041855:-1203 | Msa1462010:CDS |
| CTCCGCGATAATTTCCTCGT+TGG | 0.502476 | tig0041855:+1226 | Msa1462010:intergenic |
| ATTGAATGATGTTCATCATC+CGG | 0.504150 | tig0041855:-919 | Msa1462010:CDS |
| CGATTATGGAGTTTGTGAAT+CGG | 0.507392 | tig0041855:-809 | Msa1462010:CDS |
| TCGTTGGAATTAACCGGAAA+CGG | 0.508709 | tig0041855:+1242 | Msa1462010:intergenic |
| GAGTTTGTGAATCGGTTTGA+AGG | 0.509546 | tig0041855:-801 | Msa1462010:CDS |
| TCCTCACCGCCCAAACCACC+TGG | 0.513224 | tig0041855:-1568 | Msa1462010:CDS |
| GCTGAACGGTGCCGTTTCGA+GGG | 0.516516 | tig0041855:+1717 | Msa1462010:intergenic |
| TTGAAGAAAGCGGAGCTGCC+AGG | 0.524309 | tig0041855:+1550 | Msa1462010:intergenic |
| TACATAAACGCAACCGAAGG+TGG | 0.527019 | tig0041855:+960 | Msa1462010:intergenic |
| TTAAGAAAGGGATTGAAGGA+GGG | 0.529552 | tig0041855:-1202 | Msa1462010:CDS |
| CCATACTCATGCGCCACCAC+CGG | 0.531694 | tig0041855:+900 | Msa1462010:intergenic |
| TTCGTGCGACGGCGGTTTGG+TGG | 0.534624 | tig0041855:+1627 | Msa1462010:intergenic |
| TTTGTGAATCGGTTTGAAGG+TGG | 0.538570 | tig0041855:-798 | Msa1462010:CDS |
| TGAAAGGGATGCTAGAGATA+AGG | 0.538653 | tig0041855:-538 | Msa1462010:CDS |
| CCAACCCAAGCACTCTCAGC+AGG | 0.539864 | tig0041855:+867 | Msa1462010:intergenic |
| AACCACGACGACCCTCGAAA+CGG | 0.539957 | tig0041855:-1728 | Msa1462010:CDS |
| GGTTATGTTGAAGCAAGCGT+GGG | 0.542634 | tig0041855:-727 | Msa1462010:CDS |
| AGGCTTTGAGAAATGGTGAA+AGG | 0.551471 | tig0041855:-554 | Msa1462010:CDS |
| GAGTTTAAGAAAGGGATTGA+AGG | 0.553891 | tig0041855:-1206 | Msa1462010:CDS |
| TTTCTTTGAGTCTGGCTGAA+CGG | 0.554785 | tig0041855:+1703 | Msa1462010:intergenic |
| AGGGATGCTAGAGATAAGGA+TGG | 0.555067 | tig0041855:-534 | Msa1462010:CDS |
| GAGAATCGAGGATTCCGTTA+CGG | 0.559303 | tig0041855:+1498 | Msa1462010:intergenic |
| TTATCGCGGAGTTTAAGAAA+GGG | 0.562582 | tig0041855:-1214 | Msa1462010:CDS |
| TTCTTCAACACCCTCCGTAA+CGG | 0.565314 | tig0041855:-1512 | Msa1462010:CDS |
| AAGAACGATGGCAGCAGCGG+TGG | 0.568006 | tig0041855:+1409 | Msa1462010:intergenic |
| GGGTTATGTTGAAGCAAGCG+TGG | 0.571041 | tig0041855:-728 | Msa1462010:CDS |
| GTGTTGAAGAAGAAGTCGTC+GGG | 0.572806 | tig0041855:+1524 | Msa1462010:intergenic |
| GGTTTATAACTGGTTATGTG+AGG | 0.576418 | tig0041855:-512 | Msa1462010:CDS |
| TGATGTTCATCATCCGGTGG+TGG | 0.581615 | tig0041855:-913 | Msa1462010:CDS |
| TATGAAGAGGAACCATGGTA+TGG | 0.587034 | tig0041855:-763 | Msa1462010:CDS |
| AGATTATAGTCCTCAGCTTG+TGG | 0.589039 | tig0041855:-838 | Msa1462010:CDS |
| GGGATGCTAGAGATAAGGAT+GGG | 0.591264 | tig0041855:-533 | Msa1462010:CDS |
| AAGGAGGGAAGATTAACGGT+GGG | 0.591432 | tig0041855:-1187 | Msa1462010:CDS |
| GGTTTGAAGGTGGAATTGAA+GGG | 0.591604 | tig0041855:-788 | Msa1462010:CDS |
| TCAATAACAGAGCCACCGAC+AGG | 0.591984 | tig0041855:+1275 | Msa1462010:intergenic |
| GCCGATTTGTTGAAGAACGA+TGG | 0.592414 | tig0041855:+1397 | Msa1462010:intergenic |
| GCCAGGTGGTTTGGGCGGTG+AGG | 0.592834 | tig0041855:+1567 | Msa1462010:intergenic |
| GAGCTGCCAGGTGGTTTGGG+CGG | 0.593495 | tig0041855:+1562 | Msa1462010:intergenic |
| GTGGCGCATGAGTATGGTAA+TGG | 0.597378 | tig0041855:-894 | Msa1462010:CDS |
| GAAGCTTATGTTATACCTGT+CGG | 0.603444 | tig0041855:-1290 | Msa1462010:CDS |
| GAAGGAGGGAAGATTAACGG+TGG | 0.604748 | tig0041855:-1188 | Msa1462010:CDS |
| TTGAAGAACGATGGCAGCAG+CGG | 0.609909 | tig0041855:+1406 | Msa1462010:intergenic |
| ATGGTATGGTTGTGAAAATG+GGG | 0.613792 | tig0041855:-749 | Msa1462010:CDS |
| ATCGACGGCACCACAAGCTG+AGG | 0.616159 | tig0041855:+828 | Msa1462010:intergenic |
| CTCAAAGCCTGATAATACAC+AGG | 0.617796 | tig0041855:+567 | Msa1462010:intergenic |
| TAACAGCTTGATAAGCACAA+TGG | 0.618335 | tig0041855:+1324 | Msa1462010:intergenic |
| GTTGTTGATTCGTGCGACGG+CGG | 0.618562 | tig0041855:+1619 | Msa1462010:intergenic |
| TGAGTGATGATGATGCTTCG+AGG | 0.619097 | tig0041855:-629 | Msa1462010:CDS |
| GGTGTTGAAGAAGAAGTCGT+CGG | 0.621265 | tig0041855:+1523 | Msa1462010:intergenic |
| CTAACCGGAATAACAACTGA+AGG | 0.626000 | tig0041855:+1125 | Msa1462010:intergenic |
| ATCGAGGATTCCGTTACGGA+GGG | 0.629759 | tig0041855:+1502 | Msa1462010:intergenic |
| ACTTACCGGAGGAAAATTGA+CGG | 0.631633 | tig0041855:+1375 | Msa1462010:intergenic |
| TTCACAAACTCCATAATCGA+CGG | 0.638906 | tig0041855:+813 | Msa1462010:intergenic |
| GAATTGAAGGGATTATGAAG+AGG | 0.640801 | tig0041855:-776 | Msa1462010:CDS |
| TTCGTGAAGAAGTTCGTGTG+AGG | 0.642301 | tig0041855:+1658 | Msa1462010:intergenic |
| CGTCGGGTTGTTGAAGAAAG+CGG | 0.644114 | tig0041855:+1540 | Msa1462010:intergenic |
| GGGATTATGAAGAGGAACCA+TGG | 0.650885 | tig0041855:-768 | Msa1462010:CDS |
| CAATACATAAACGCAACCGA+AGG | 0.652956 | tig0041855:+957 | Msa1462010:intergenic |
| AATCGAGGATTCCGTTACGG+AGG | 0.662241 | tig0041855:+1501 | Msa1462010:intergenic |
| TTCCAACGAGGAAATTATCG+CGG | 0.665860 | tig0041855:-1228 | Msa1462010:CDS |
| GCTTATGTTATACCTGTCGG+TGG | 0.674775 | tig0041855:-1287 | Msa1462010:CDS |
| GTTATGTTGAAGCAAGCGTG+GGG | 0.691208 | tig0041855:-726 | Msa1462010:CDS |
| AAGAAAGCGGAGCTGCCAGG+TGG | 0.699750 | tig0041855:+1553 | Msa1462010:intergenic |
| ATTTCGGCAGAACTTACCGG+AGG | 0.711142 | tig0041855:+1364 | Msa1462010:intergenic |
| GAATGATGTTCATCATCCGG+TGG | 0.719802 | tig0041855:-916 | Msa1462010:CDS |
| GCCGTCGCACGAATCAACAA+CGG | 0.725169 | tig0041855:-1617 | Msa1462010:CDS |
| ATACTCGCACACATTTCAGG+CGG | 0.737674 | tig0041855:+687 | Msa1462010:intergenic |
| TGGTATGGTTGTGAAAATGG+GGG | 0.742084 | tig0041855:-748 | Msa1462010:CDS |
| GTTTCCGGTTAATTCCAACG+AGG | 0.797229 | tig0041855:-1240 | Msa1462010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAGTAATTTGTATAAA+TGG | - | tig0041855:1149-1168 | Msa1462010:CDS | 15.0% |
| !!! | ATGTTAGTAATTTGTATAAA+TGG | - | tig0041855:1149-1168 | Msa1462010:CDS | 15.0% |
| !!! | AAATTATAACACTGTCATTT+CGG | + | tig0041855:796-815 | Msa1462010:intergenic | 20.0% |
| !!! | AAATTATAACACTGTCATTT+CGG | + | tig0041855:796-815 | Msa1462010:intergenic | 20.0% |
| ! | AAGTTTGAATGTTGATGTTA+AGG | - | tig0041855:1108-1127 | Msa1462010:CDS | 25.0% |
| ! | AATGTTGATGTTAAGGAAAT+TGG | - | tig0041855:1115-1134 | Msa1462010:CDS | 25.0% |
| !!! | ACACTGTTGATGATTATAAT+AGG | - | tig0041855:1671-1690 | Msa1462010:CDS | 25.0% |
| ! | AAGTTTGAATGTTGATGTTA+AGG | - | tig0041855:1108-1127 | Msa1462010:CDS | 25.0% |
| ! | AATGTTGATGTTAAGGAAAT+TGG | - | tig0041855:1115-1134 | Msa1462010:CDS | 25.0% |
| !!! | ACACTGTTGATGATTATAAT+AGG | - | tig0041855:1671-1690 | Msa1462010:CDS | 25.0% |
| ATTGAATGATGTTCATCATC+CGG | - | tig0041855:1222-1241 | Msa1462010:CDS | 30.0% | |
| !! | GAGGTTAAGGTTTTATCTTA+GGG | - | tig0041855:1531-1550 | Msa1462010:CDS | 30.0% |
| !! | TATTATCAGGCTTTGAGAAA+TGG | - | tig0041855:1580-1599 | Msa1462010:CDS | 30.0% |
| !! | ATTATTCAGCTTTTGGAAGA+TGG | - | tig0041855:1706-1725 | Msa1462010:CDS | 30.0% |
| ATTGAATGATGTTCATCATC+CGG | - | tig0041855:1222-1241 | Msa1462010:CDS | 30.0% | |
| !! | GAGGTTAAGGTTTTATCTTA+GGG | - | tig0041855:1531-1550 | Msa1462010:CDS | 30.0% |
| !! | TATTATCAGGCTTTGAGAAA+TGG | - | tig0041855:1580-1599 | Msa1462010:CDS | 30.0% |
| !! | ATTATTCAGCTTTTGGAAGA+TGG | - | tig0041855:1706-1725 | Msa1462010:CDS | 30.0% |
| !!! | AGTTTTGGTTTCTTTGAGTC+TGG | + | tig0041855:449-468 | Msa1462010:intergenic | 35.0% |
| TAACAGCTTGATAAGCACAA+TGG | + | tig0041855:820-839 | Msa1462010:intergenic | 35.0% | |
| GAAGCTTATGTTATACCTGT+CGG | - | tig0041855:851-870 | Msa1462010:CDS | 35.0% | |
| ATTTCCTCGTTGGAATTAAC+CGG | + | tig0041855:908-927 | Msa1462010:intergenic | 35.0% | |
| ATTATCGCGGAGTTTAAGAA+AGG | - | tig0041855:926-945 | Msa1462010:CDS | 35.0% | |
| TTATCGCGGAGTTTAAGAAA+GGG | - | tig0041855:927-946 | Msa1462010:CDS | 35.0% | |
| GAGTTTAAGAAAGGGATTGA+AGG | - | tig0041855:935-954 | Msa1462010:CDS | 35.0% | |
| TTTAAGAAAGGGATTGAAGG+AGG | - | tig0041855:938-957 | Msa1462010:CDS | 35.0% | |
| TTAAGAAAGGGATTGAAGGA+GGG | - | tig0041855:939-958 | Msa1462010:CDS | 35.0% | |
| ATTGAAGGAGGGAAGATTAA+CGG | - | tig0041855:950-969 | Msa1462010:CDS | 35.0% | |
| ! | TTCAGTTGTTATTCCGGTTA+GGG | - | tig0041855:1018-1037 | Msa1462010:CDS | 35.0% |
| ATTGATTAGGGTTTGTAGAG+AGG | - | tig0041855:1042-1061 | Msa1462010:CDS | 35.0% | |
| ! | GTGGATCAGATTTTTGTTGA+TGG | - | tig0041855:1070-1089 | Msa1462010:CDS | 35.0% |
| TTCACAAACTCCATAATCGA+CGG | + | tig0041855:1331-1350 | Msa1462010:intergenic | 35.0% | |
| CGATTATGGAGTTTGTGAAT+CGG | - | tig0041855:1332-1351 | Msa1462010:CDS | 35.0% | |
| GAATTGAAGGGATTATGAAG+AGG | - | tig0041855:1365-1384 | Msa1462010:CDS | 35.0% | |
| CATGGTATGGTTGTGAAAAT+GGG | - | tig0041855:1391-1410 | Msa1462010:CDS | 35.0% | |
| ATGGTATGGTTGTGAAAATG+GGG | - | tig0041855:1392-1411 | Msa1462010:CDS | 35.0% | |
| TGTGCGAGTATGATTATGAT+TGG | - | tig0041855:1466-1485 | Msa1462010:CDS | 35.0% | |
| !! | TTGGTTTGCCTTCAAAGATT+CGG | - | tig0041855:1485-1504 | Msa1462010:CDS | 35.0% |
| !! | CGAGGTTAAGGTTTTATCTT+AGG | - | tig0041855:1530-1549 | Msa1462010:CDS | 35.0% |
| TGAAGTTCCTGTGTATTATC+AGG | - | tig0041855:1567-1586 | Msa1462010:CDS | 35.0% | |
| ! | GATAAGGATGGGTTTATAAC+TGG | - | tig0041855:1619-1638 | Msa1462010:CDS | 35.0% |
| GGTTTATAACTGGTTATGTG+AGG | - | tig0041855:1629-1648 | Msa1462010:CDS | 35.0% | |
| TTATGTGAGGATTTCTCATC+AGG | - | tig0041855:1642-1661 | Msa1462010:CDS | 35.0% | |
| ! | GACTGCAATTATTCAGCTTT+TGG | - | tig0041855:1699-1718 | Msa1462010:CDS | 35.0% |
| !!! | AGTTTTGGTTTCTTTGAGTC+TGG | + | tig0041855:449-468 | Msa1462010:intergenic | 35.0% |
| TAACAGCTTGATAAGCACAA+TGG | + | tig0041855:820-839 | Msa1462010:intergenic | 35.0% | |
| GAAGCTTATGTTATACCTGT+CGG | - | tig0041855:851-870 | Msa1462010:CDS | 35.0% | |
| ATTTCCTCGTTGGAATTAAC+CGG | + | tig0041855:908-927 | Msa1462010:intergenic | 35.0% | |
| ATTATCGCGGAGTTTAAGAA+AGG | - | tig0041855:926-945 | Msa1462010:CDS | 35.0% | |
| TTATCGCGGAGTTTAAGAAA+GGG | - | tig0041855:927-946 | Msa1462010:CDS | 35.0% | |
| GAGTTTAAGAAAGGGATTGA+AGG | - | tig0041855:935-954 | Msa1462010:CDS | 35.0% | |
| TTTAAGAAAGGGATTGAAGG+AGG | - | tig0041855:938-957 | Msa1462010:CDS | 35.0% | |
| TTAAGAAAGGGATTGAAGGA+GGG | - | tig0041855:939-958 | Msa1462010:CDS | 35.0% | |
| ATTGAAGGAGGGAAGATTAA+CGG | - | tig0041855:950-969 | Msa1462010:CDS | 35.0% | |
| ! | TTCAGTTGTTATTCCGGTTA+GGG | - | tig0041855:1018-1037 | Msa1462010:CDS | 35.0% |
| ATTGATTAGGGTTTGTAGAG+AGG | - | tig0041855:1042-1061 | Msa1462010:CDS | 35.0% | |
| ! | GTGGATCAGATTTTTGTTGA+TGG | - | tig0041855:1070-1089 | Msa1462010:CDS | 35.0% |
| TTCACAAACTCCATAATCGA+CGG | + | tig0041855:1331-1350 | Msa1462010:intergenic | 35.0% | |
| CGATTATGGAGTTTGTGAAT+CGG | - | tig0041855:1332-1351 | Msa1462010:CDS | 35.0% | |
| GAATTGAAGGGATTATGAAG+AGG | - | tig0041855:1365-1384 | Msa1462010:CDS | 35.0% | |
| CATGGTATGGTTGTGAAAAT+GGG | - | tig0041855:1391-1410 | Msa1462010:CDS | 35.0% | |
| ATGGTATGGTTGTGAAAATG+GGG | - | tig0041855:1392-1411 | Msa1462010:CDS | 35.0% | |
| TGTGCGAGTATGATTATGAT+TGG | - | tig0041855:1466-1485 | Msa1462010:CDS | 35.0% | |
| !! | TTGGTTTGCCTTCAAAGATT+CGG | - | tig0041855:1485-1504 | Msa1462010:CDS | 35.0% |
| !! | CGAGGTTAAGGTTTTATCTT+AGG | - | tig0041855:1530-1549 | Msa1462010:CDS | 35.0% |
| TGAAGTTCCTGTGTATTATC+AGG | - | tig0041855:1567-1586 | Msa1462010:CDS | 35.0% | |
| ! | GATAAGGATGGGTTTATAAC+TGG | - | tig0041855:1619-1638 | Msa1462010:CDS | 35.0% |
| GGTTTATAACTGGTTATGTG+AGG | - | tig0041855:1629-1648 | Msa1462010:CDS | 35.0% | |
| TTATGTGAGGATTTCTCATC+AGG | - | tig0041855:1642-1661 | Msa1462010:CDS | 35.0% | |
| ! | GACTGCAATTATTCAGCTTT+TGG | - | tig0041855:1699-1718 | Msa1462010:CDS | 35.0% |
| TTTCTTTGAGTCTGGCTGAA+CGG | + | tig0041855:441-460 | Msa1462010:intergenic | 40.0% | |
| ! | GAAATGGAGTGAGTGAGTTT+TGG | + | tig0041855:464-483 | Msa1462010:intergenic | 40.0% |
| AAGAAGTTCGTGTGAGGAAA+TGG | + | tig0041855:480-499 | Msa1462010:intergenic | 40.0% | |
| ! | TGATGATTTTGCGAGAATCG+AGG | + | tig0041855:658-677 | Msa1462010:intergenic | 40.0% |
| CGAAATTTCTTCGACGTCAT+CGG | + | tig0041855:696-715 | Msa1462010:intergenic | 40.0% | |
| GCCATCGTTCTTCAACAAAT+CGG | - | tig0041855:743-762 | Msa1462010:CDS | 40.0% | |
| ACTTACCGGAGGAAAATTGA+CGG | + | tig0041855:769-788 | Msa1462010:intergenic | 40.0% | |
| TGAGGTTGAATTACCGTTTC+CGG | - | tig0041855:886-905 | Msa1462010:CDS | 40.0% | |
| TCGTTGGAATTAACCGGAAA+CGG | + | tig0041855:902-921 | Msa1462010:intergenic | 40.0% | |
| TTCCAACGAGGAAATTATCG+CGG | - | tig0041855:913-932 | Msa1462010:CDS | 40.0% | |
| ! | GATGCCTTCAGTTGTTATTC+CGG | - | tig0041855:1012-1031 | Msa1462010:CDS | 40.0% |
| CTAACCGGAATAACAACTGA+AGG | + | tig0041855:1019-1038 | Msa1462010:intergenic | 40.0% | |
| ! | CTTCAGTTGTTATTCCGGTT+AGG | - | tig0041855:1017-1036 | Msa1462010:CDS | 40.0% |
| TTCCGGTTAGGGAATTGATT+AGG | - | tig0041855:1029-1048 | Msa1462010:CDS | 40.0% | |
| TCCGGTTAGGGAATTGATTA+GGG | - | tig0041855:1030-1049 | Msa1462010:CDS | 40.0% | |
| ACCCTAATCAATTCCCTAAC+CGG | + | tig0041855:1034-1053 | Msa1462010:intergenic | 40.0% | |
| !!! | ATGGTTTTTTTCGCCACCTT+CGG | - | tig0041855:1168-1187 | Msa1462010:CDS | 40.0% |
| CAATACATAAACGCAACCGA+AGG | + | tig0041855:1187-1206 | Msa1462010:intergenic | 40.0% | |
| AGATTATAGTCCTCAGCTTG+TGG | - | tig0041855:1303-1322 | Msa1462010:CDS | 40.0% | |
| !! | GAGTTTGTGAATCGGTTTGA+AGG | - | tig0041855:1340-1359 | Msa1462010:CDS | 40.0% |
| !! | TTTGTGAATCGGTTTGAAGG+TGG | - | tig0041855:1343-1362 | Msa1462010:CDS | 40.0% |
| GGTTTGAAGGTGGAATTGAA+GGG | - | tig0041855:1353-1372 | Msa1462010:CDS | 40.0% | |
| TATGAAGAGGAACCATGGTA+TGG | - | tig0041855:1378-1397 | Msa1462010:CDS | 40.0% | |
| ! | CCATTTTCACAACCATACCA+TGG | + | tig0041855:1393-1412 | Msa1462010:intergenic | 40.0% |
| CCATGGTATGGTTGTGAAAA+TGG | - | tig0041855:1390-1409 | Msa1462010:CDS | 40.0% | |
| TGGTATGGTTGTGAAAATGG+GGG | - | tig0041855:1393-1412 | Msa1462010:CDS | 40.0% | |
| ATCATACTCGCACACATTTC+AGG | + | tig0041855:1460-1479 | Msa1462010:intergenic | 40.0% | |
| ! | TGGTTTGCCTTCAAAGATTC+GGG | - | tig0041855:1486-1505 | Msa1462010:CDS | 40.0% |
| ! | ATGATGATGCTTCGAGGTTA+AGG | - | tig0041855:1518-1537 | Msa1462010:CDS | 40.0% |
| CTCAAAGCCTGATAATACAC+AGG | + | tig0041855:1577-1596 | Msa1462010:intergenic | 40.0% | |
| !! | AGGCTTTGAGAAATGGTGAA+AGG | - | tig0041855:1587-1606 | Msa1462010:CDS | 40.0% |
| !! | GGCTTTGAGAAATGGTGAAA+GGG | - | tig0041855:1588-1607 | Msa1462010:CDS | 40.0% |
| TGAAAGGGATGCTAGAGATA+AGG | - | tig0041855:1603-1622 | Msa1462010:CDS | 40.0% | |
| TTTCTTTGAGTCTGGCTGAA+CGG | + | tig0041855:441-460 | Msa1462010:intergenic | 40.0% | |
| ! | GAAATGGAGTGAGTGAGTTT+TGG | + | tig0041855:464-483 | Msa1462010:intergenic | 40.0% |
| AAGAAGTTCGTGTGAGGAAA+TGG | + | tig0041855:480-499 | Msa1462010:intergenic | 40.0% | |
| ! | TGATGATTTTGCGAGAATCG+AGG | + | tig0041855:658-677 | Msa1462010:intergenic | 40.0% |
| CGAAATTTCTTCGACGTCAT+CGG | + | tig0041855:696-715 | Msa1462010:intergenic | 40.0% | |
| GCCATCGTTCTTCAACAAAT+CGG | - | tig0041855:743-762 | Msa1462010:CDS | 40.0% | |
| ACTTACCGGAGGAAAATTGA+CGG | + | tig0041855:769-788 | Msa1462010:intergenic | 40.0% | |
| TGAGGTTGAATTACCGTTTC+CGG | - | tig0041855:886-905 | Msa1462010:CDS | 40.0% | |
| TCGTTGGAATTAACCGGAAA+CGG | + | tig0041855:902-921 | Msa1462010:intergenic | 40.0% | |
| TTCCAACGAGGAAATTATCG+CGG | - | tig0041855:913-932 | Msa1462010:CDS | 40.0% | |
| ! | GATGCCTTCAGTTGTTATTC+CGG | - | tig0041855:1012-1031 | Msa1462010:CDS | 40.0% |
| CTAACCGGAATAACAACTGA+AGG | + | tig0041855:1019-1038 | Msa1462010:intergenic | 40.0% | |
| ! | CTTCAGTTGTTATTCCGGTT+AGG | - | tig0041855:1017-1036 | Msa1462010:CDS | 40.0% |
| TTCCGGTTAGGGAATTGATT+AGG | - | tig0041855:1029-1048 | Msa1462010:CDS | 40.0% | |
| TCCGGTTAGGGAATTGATTA+GGG | - | tig0041855:1030-1049 | Msa1462010:CDS | 40.0% | |
| ACCCTAATCAATTCCCTAAC+CGG | + | tig0041855:1034-1053 | Msa1462010:intergenic | 40.0% | |
| !!! | ATGGTTTTTTTCGCCACCTT+CGG | - | tig0041855:1168-1187 | Msa1462010:CDS | 40.0% |
| CAATACATAAACGCAACCGA+AGG | + | tig0041855:1187-1206 | Msa1462010:intergenic | 40.0% | |
| AGATTATAGTCCTCAGCTTG+TGG | - | tig0041855:1303-1322 | Msa1462010:CDS | 40.0% | |
| !! | GAGTTTGTGAATCGGTTTGA+AGG | - | tig0041855:1340-1359 | Msa1462010:CDS | 40.0% |
| !! | TTTGTGAATCGGTTTGAAGG+TGG | - | tig0041855:1343-1362 | Msa1462010:CDS | 40.0% |
| GGTTTGAAGGTGGAATTGAA+GGG | - | tig0041855:1353-1372 | Msa1462010:CDS | 40.0% | |
| TATGAAGAGGAACCATGGTA+TGG | - | tig0041855:1378-1397 | Msa1462010:CDS | 40.0% | |
| ! | CCATTTTCACAACCATACCA+TGG | + | tig0041855:1393-1412 | Msa1462010:intergenic | 40.0% |
| CCATGGTATGGTTGTGAAAA+TGG | - | tig0041855:1390-1409 | Msa1462010:CDS | 40.0% | |
| TGGTATGGTTGTGAAAATGG+GGG | - | tig0041855:1393-1412 | Msa1462010:CDS | 40.0% | |
| ATCATACTCGCACACATTTC+AGG | + | tig0041855:1460-1479 | Msa1462010:intergenic | 40.0% | |
| ! | TGGTTTGCCTTCAAAGATTC+GGG | - | tig0041855:1486-1505 | Msa1462010:CDS | 40.0% |
| ! | ATGATGATGCTTCGAGGTTA+AGG | - | tig0041855:1518-1537 | Msa1462010:CDS | 40.0% |
| CTCAAAGCCTGATAATACAC+AGG | + | tig0041855:1577-1596 | Msa1462010:intergenic | 40.0% | |
| !! | AGGCTTTGAGAAATGGTGAA+AGG | - | tig0041855:1587-1606 | Msa1462010:CDS | 40.0% |
| !! | GGCTTTGAGAAATGGTGAAA+GGG | - | tig0041855:1588-1607 | Msa1462010:CDS | 40.0% |
| TGAAAGGGATGCTAGAGATA+AGG | - | tig0041855:1603-1622 | Msa1462010:CDS | 40.0% | |
| TTCGTGAAGAAGTTCGTGTG+AGG | + | tig0041855:486-505 | Msa1462010:intergenic | 45.0% | |
| GTGTTGAAGAAGAAGTCGTC+GGG | + | tig0041855:620-639 | Msa1462010:intergenic | 45.0% | |
| ! | GGTGTTGAAGAAGAAGTCGT+CGG | + | tig0041855:621-640 | Msa1462010:intergenic | 45.0% |
| TTCTTCAACACCCTCCGTAA+CGG | - | tig0041855:629-648 | Msa1462010:CDS | 45.0% | |
| GAGAATCGAGGATTCCGTTA+CGG | + | tig0041855:646-665 | Msa1462010:intergenic | 45.0% | |
| !! | GCCGATTTGTTGAAGAACGA+TGG | + | tig0041855:747-766 | Msa1462010:intergenic | 45.0% |
| GTCATTTCGGCAGAACTTAC+CGG | + | tig0041855:783-802 | Msa1462010:intergenic | 45.0% | |
| GCTTATGTTATACCTGTCGG+TGG | - | tig0041855:854-873 | Msa1462010:CDS | 45.0% | |
| GTTTCCGGTTAATTCCAACG+AGG | - | tig0041855:901-920 | Msa1462010:CDS | 45.0% | |
| AAGGAGGGAAGATTAACGGT+GGG | - | tig0041855:954-973 | Msa1462010:CDS | 45.0% | |
| AGATTAACGGTGGGAGAGTT+AGG | - | tig0041855:963-982 | Msa1462010:CDS | 45.0% | |
| GGTTTGTAGAGAGGAAGAAG+TGG | - | tig0041855:1051-1070 | Msa1462010:CDS | 45.0% | |
| !! | GTTGATGGTGCTCATGCTTT+AGG | - | tig0041855:1085-1104 | Msa1462010:CDS | 45.0% |
| TACATAAACGCAACCGAAGG+TGG | + | tig0041855:1184-1203 | Msa1462010:intergenic | 45.0% | |
| GAATGATGTTCATCATCCGG+TGG | - | tig0041855:1225-1244 | Msa1462010:CDS | 45.0% | |
| CGGTTTGAAGGTGGAATTGA+AGG | - | tig0041855:1352-1371 | Msa1462010:CDS | 45.0% | |
| GGGATTATGAAGAGGAACCA+TGG | - | tig0041855:1373-1392 | Msa1462010:CDS | 45.0% | |
| GGTTATGTTGAAGCAAGCGT+GGG | - | tig0041855:1414-1433 | Msa1462010:CDS | 45.0% | |
| GTTATGTTGAAGCAAGCGTG+GGG | - | tig0041855:1415-1434 | Msa1462010:CDS | 45.0% | |
| AAGCGTGGGGTACAAATCTT+GGG | - | tig0041855:1428-1447 | Msa1462010:CDS | 45.0% | |
| ATACTCGCACACATTTCAGG+CGG | + | tig0041855:1457-1476 | Msa1462010:intergenic | 45.0% | |
| CTCATCACCCGAATCTTTGA+AGG | + | tig0041855:1496-1515 | Msa1462010:intergenic | 45.0% | |
| ! | TGAGTGATGATGATGCTTCG+AGG | - | tig0041855:1512-1531 | Msa1462010:CDS | 45.0% |
| AGGGATGCTAGAGATAAGGA+TGG | - | tig0041855:1607-1626 | Msa1462010:CDS | 45.0% | |
| GGGATGCTAGAGATAAGGAT+GGG | - | tig0041855:1608-1627 | Msa1462010:CDS | 45.0% | |
| TTCGTGAAGAAGTTCGTGTG+AGG | + | tig0041855:486-505 | Msa1462010:intergenic | 45.0% | |
| GTGTTGAAGAAGAAGTCGTC+GGG | + | tig0041855:620-639 | Msa1462010:intergenic | 45.0% | |
| ! | GGTGTTGAAGAAGAAGTCGT+CGG | + | tig0041855:621-640 | Msa1462010:intergenic | 45.0% |
| TTCTTCAACACCCTCCGTAA+CGG | - | tig0041855:629-648 | Msa1462010:CDS | 45.0% | |
| GAGAATCGAGGATTCCGTTA+CGG | + | tig0041855:646-665 | Msa1462010:intergenic | 45.0% | |
| !! | GCCGATTTGTTGAAGAACGA+TGG | + | tig0041855:747-766 | Msa1462010:intergenic | 45.0% |
| GTCATTTCGGCAGAACTTAC+CGG | + | tig0041855:783-802 | Msa1462010:intergenic | 45.0% | |
| GCTTATGTTATACCTGTCGG+TGG | - | tig0041855:854-873 | Msa1462010:CDS | 45.0% | |
| GTTTCCGGTTAATTCCAACG+AGG | - | tig0041855:901-920 | Msa1462010:CDS | 45.0% | |
| AAGGAGGGAAGATTAACGGT+GGG | - | tig0041855:954-973 | Msa1462010:CDS | 45.0% | |
| AGATTAACGGTGGGAGAGTT+AGG | - | tig0041855:963-982 | Msa1462010:CDS | 45.0% | |
| GGTTTGTAGAGAGGAAGAAG+TGG | - | tig0041855:1051-1070 | Msa1462010:CDS | 45.0% | |
| !! | GTTGATGGTGCTCATGCTTT+AGG | - | tig0041855:1085-1104 | Msa1462010:CDS | 45.0% |
| TACATAAACGCAACCGAAGG+TGG | + | tig0041855:1184-1203 | Msa1462010:intergenic | 45.0% | |
| GAATGATGTTCATCATCCGG+TGG | - | tig0041855:1225-1244 | Msa1462010:CDS | 45.0% | |
| CGGTTTGAAGGTGGAATTGA+AGG | - | tig0041855:1352-1371 | Msa1462010:CDS | 45.0% | |
| GGGATTATGAAGAGGAACCA+TGG | - | tig0041855:1373-1392 | Msa1462010:CDS | 45.0% | |
| GGTTATGTTGAAGCAAGCGT+GGG | - | tig0041855:1414-1433 | Msa1462010:CDS | 45.0% | |
| GTTATGTTGAAGCAAGCGTG+GGG | - | tig0041855:1415-1434 | Msa1462010:CDS | 45.0% | |
| AAGCGTGGGGTACAAATCTT+GGG | - | tig0041855:1428-1447 | Msa1462010:CDS | 45.0% | |
| ATACTCGCACACATTTCAGG+CGG | + | tig0041855:1457-1476 | Msa1462010:intergenic | 45.0% | |
| CTCATCACCCGAATCTTTGA+AGG | + | tig0041855:1496-1515 | Msa1462010:intergenic | 45.0% | |
| ! | TGAGTGATGATGATGCTTCG+AGG | - | tig0041855:1512-1531 | Msa1462010:CDS | 45.0% |
| AGGGATGCTAGAGATAAGGA+TGG | - | tig0041855:1607-1626 | Msa1462010:CDS | 45.0% | |
| GGGATGCTAGAGATAAGGAT+GGG | - | tig0041855:1608-1627 | Msa1462010:CDS | 45.0% | |
| CGAATCAACAACGGCAGCTT+CGG | - | tig0041855:533-552 | Msa1462010:CDS | 50.0% | |
| ! | CGTCGGGTTGTTGAAGAAAG+CGG | + | tig0041855:604-623 | Msa1462010:intergenic | 50.0% |
| ATCGAGGATTCCGTTACGGA+GGG | + | tig0041855:642-661 | Msa1462010:intergenic | 50.0% | |
| AATCGAGGATTCCGTTACGG+AGG | + | tig0041855:643-662 | Msa1462010:intergenic | 50.0% | |
| !! | CGACGTCATCGGCATTGATT+AGG | + | tig0041855:685-704 | Msa1462010:intergenic | 50.0% |
| TTGAAGAACGATGGCAGCAG+CGG | + | tig0041855:738-757 | Msa1462010:intergenic | 50.0% | |
| ! | ATCGGCCGTCAATTTTCCTC+CGG | - | tig0041855:761-780 | Msa1462010:CDS | 50.0% |
| ATTTCGGCAGAACTTACCGG+AGG | + | tig0041855:780-799 | Msa1462010:intergenic | 50.0% | |
| TCAATAACAGAGCCACCGAC+AGG | + | tig0041855:869-888 | Msa1462010:intergenic | 50.0% | |
| ! | TGTCGGTGGCTCTGTTATTG+AGG | - | tig0041855:868-887 | Msa1462010:CDS | 50.0% |
| CTCCGCGATAATTTCCTCGT+TGG | + | tig0041855:918-937 | Msa1462010:intergenic | 50.0% | |
| GAAGGAGGGAAGATTAACGG+TGG | - | tig0041855:953-972 | Msa1462010:CDS | 50.0% | |
| TGATGTTCATCATCCGGTGG+TGG | - | tig0041855:1228-1247 | Msa1462010:CDS | 50.0% | |
| GTGGCGCATGAGTATGGTAA+TGG | - | tig0041855:1247-1266 | Msa1462010:CDS | 50.0% | |
| !! | TTTGCCTGCTGAGAGTGCTT+GGG | - | tig0041855:1270-1289 | Msa1462010:CDS | 50.0% |
| GGGTTATGTTGAAGCAAGCG+TGG | - | tig0041855:1413-1432 | Msa1462010:CDS | 50.0% | |
| CAAGCGTGGGGTACAAATCT+TGG | - | tig0041855:1427-1446 | Msa1462010:CDS | 50.0% | |
| CGAATCAACAACGGCAGCTT+CGG | - | tig0041855:533-552 | Msa1462010:CDS | 50.0% | |
| ! | CGTCGGGTTGTTGAAGAAAG+CGG | + | tig0041855:604-623 | Msa1462010:intergenic | 50.0% |
| ATCGAGGATTCCGTTACGGA+GGG | + | tig0041855:642-661 | Msa1462010:intergenic | 50.0% | |
| AATCGAGGATTCCGTTACGG+AGG | + | tig0041855:643-662 | Msa1462010:intergenic | 50.0% | |
| !! | CGACGTCATCGGCATTGATT+AGG | + | tig0041855:685-704 | Msa1462010:intergenic | 50.0% |
| TTGAAGAACGATGGCAGCAG+CGG | + | tig0041855:738-757 | Msa1462010:intergenic | 50.0% | |
| ! | ATCGGCCGTCAATTTTCCTC+CGG | - | tig0041855:761-780 | Msa1462010:CDS | 50.0% |
| ATTTCGGCAGAACTTACCGG+AGG | + | tig0041855:780-799 | Msa1462010:intergenic | 50.0% | |
| TCAATAACAGAGCCACCGAC+AGG | + | tig0041855:869-888 | Msa1462010:intergenic | 50.0% | |
| ! | TGTCGGTGGCTCTGTTATTG+AGG | - | tig0041855:868-887 | Msa1462010:CDS | 50.0% |
| CTCCGCGATAATTTCCTCGT+TGG | + | tig0041855:918-937 | Msa1462010:intergenic | 50.0% | |
| GAAGGAGGGAAGATTAACGG+TGG | - | tig0041855:953-972 | Msa1462010:CDS | 50.0% | |
| TGATGTTCATCATCCGGTGG+TGG | - | tig0041855:1228-1247 | Msa1462010:CDS | 50.0% | |
| GTGGCGCATGAGTATGGTAA+TGG | - | tig0041855:1247-1266 | Msa1462010:CDS | 50.0% | |
| !! | TTTGCCTGCTGAGAGTGCTT+GGG | - | tig0041855:1270-1289 | Msa1462010:CDS | 50.0% |
| GGGTTATGTTGAAGCAAGCG+TGG | - | tig0041855:1413-1432 | Msa1462010:CDS | 50.0% | |
| CAAGCGTGGGGTACAAATCT+TGG | - | tig0041855:1427-1446 | Msa1462010:CDS | 50.0% | |
| AACCACGACGACCCTCGAAA+CGG | - | tig0041855:413-432 | Msa1462010:CDS | 55.0% | |
| !! | GTTGTTGATTCGTGCGACGG+CGG | + | tig0041855:525-544 | Msa1462010:intergenic | 55.0% |
| GCCGTCGCACGAATCAACAA+CGG | - | tig0041855:524-543 | Msa1462010:CDS | 55.0% | |
| !! | GCCGTTGTTGATTCGTGCGA+CGG | + | tig0041855:528-547 | Msa1462010:intergenic | 55.0% |
| TTGAAGAAAGCGGAGCTGCC+AGG | + | tig0041855:594-613 | Msa1462010:intergenic | 55.0% | |
| !! | GTTTGCCTGCTGAGAGTGCT+TGG | - | tig0041855:1269-1288 | Msa1462010:CDS | 55.0% |
| !! | CTGCTGAGAGTGCTTGGGTT+GGG | - | tig0041855:1275-1294 | Msa1462010:CDS | 55.0% |
| !! | GCTTGTGGTGCCGTCGATTA+TGG | - | tig0041855:1318-1337 | Msa1462010:CDS | 55.0% |
| AACCACGACGACCCTCGAAA+CGG | - | tig0041855:413-432 | Msa1462010:CDS | 55.0% | |
| !! | GTTGTTGATTCGTGCGACGG+CGG | + | tig0041855:525-544 | Msa1462010:intergenic | 55.0% |
| GCCGTCGCACGAATCAACAA+CGG | - | tig0041855:524-543 | Msa1462010:CDS | 55.0% | |
| !! | GCCGTTGTTGATTCGTGCGA+CGG | + | tig0041855:528-547 | Msa1462010:intergenic | 55.0% |
| TTGAAGAAAGCGGAGCTGCC+AGG | + | tig0041855:594-613 | Msa1462010:intergenic | 55.0% | |
| !! | GTTTGCCTGCTGAGAGTGCT+TGG | - | tig0041855:1269-1288 | Msa1462010:CDS | 55.0% |
| !! | CTGCTGAGAGTGCTTGGGTT+GGG | - | tig0041855:1275-1294 | Msa1462010:CDS | 55.0% |
| !! | GCTTGTGGTGCCGTCGATTA+TGG | - | tig0041855:1318-1337 | Msa1462010:CDS | 55.0% |
| !! | GCTGAACGGTGCCGTTTCGA+GGG | + | tig0041855:427-446 | Msa1462010:intergenic | 60.0% |
| TGATTCGTGCGACGGCGGTT+TGG | + | tig0041855:520-539 | Msa1462010:intergenic | 60.0% | |
| TTTGGGCGGTGAGGATGGAG+CGG | + | tig0041855:568-587 | Msa1462010:intergenic | 60.0% | |
| AAGAAAGCGGAGCTGCCAGG+TGG | + | tig0041855:591-610 | Msa1462010:intergenic | 60.0% | |
| AAGAACGATGGCAGCAGCGG+TGG | + | tig0041855:735-754 | Msa1462010:intergenic | 60.0% | |
| CCATACTCATGCGCCACCAC+CGG | + | tig0041855:1244-1263 | Msa1462010:intergenic | 60.0% | |
| CCAACCCAAGCACTCTCAGC+AGG | + | tig0041855:1277-1296 | Msa1462010:intergenic | 60.0% | |
| !! | CCTGCTGAGAGTGCTTGGGT+TGG | - | tig0041855:1274-1293 | Msa1462010:CDS | 60.0% |
| ATCGACGGCACCACAAGCTG+AGG | + | tig0041855:1316-1335 | Msa1462010:intergenic | 60.0% | |
| !! | GCTGAACGGTGCCGTTTCGA+GGG | + | tig0041855:427-446 | Msa1462010:intergenic | 60.0% |
| TGATTCGTGCGACGGCGGTT+TGG | + | tig0041855:520-539 | Msa1462010:intergenic | 60.0% | |
| TTTGGGCGGTGAGGATGGAG+CGG | + | tig0041855:568-587 | Msa1462010:intergenic | 60.0% | |
| AAGAAAGCGGAGCTGCCAGG+TGG | + | tig0041855:591-610 | Msa1462010:intergenic | 60.0% | |
| AAGAACGATGGCAGCAGCGG+TGG | + | tig0041855:735-754 | Msa1462010:intergenic | 60.0% | |
| CCATACTCATGCGCCACCAC+CGG | + | tig0041855:1244-1263 | Msa1462010:intergenic | 60.0% | |
| CCAACCCAAGCACTCTCAGC+AGG | + | tig0041855:1277-1296 | Msa1462010:intergenic | 60.0% | |
| !! | CCTGCTGAGAGTGCTTGGGT+TGG | - | tig0041855:1274-1293 | Msa1462010:CDS | 60.0% |
| ATCGACGGCACCACAAGCTG+AGG | + | tig0041855:1316-1335 | Msa1462010:intergenic | 60.0% | |
| ! | TGCCGTTTCGAGGGTCGTCG+TGG | + | tig0041855:418-437 | Msa1462010:intergenic | 65.0% |
| !! | GGCTGAACGGTGCCGTTTCG+AGG | + | tig0041855:428-447 | Msa1462010:intergenic | 65.0% |
| !! | TGCGACGGCGGTTTGGTGGT+GGG | + | tig0041855:513-532 | Msa1462010:intergenic | 65.0% |
| ! | TTCGTGCGACGGCGGTTTGG+TGG | + | tig0041855:517-536 | Msa1462010:intergenic | 65.0% |
| TTGGGCGGTGAGGATGGAGC+GGG | + | tig0041855:567-586 | Msa1462010:intergenic | 65.0% | |
| ! | GGTGGTTTGGGCGGTGAGGA+TGG | + | tig0041855:573-592 | Msa1462010:intergenic | 65.0% |
| TCCTCACCGCCCAAACCACC+TGG | - | tig0041855:573-592 | Msa1462010:CDS | 65.0% | |
| ! | GAGCTGCCAGGTGGTTTGGG+CGG | + | tig0041855:582-601 | Msa1462010:intergenic | 65.0% |
| GCGGAGCTGCCAGGTGGTTT+GGG | + | tig0041855:585-604 | Msa1462010:intergenic | 65.0% | |
| AGCGGAGCTGCCAGGTGGTT+TGG | + | tig0041855:586-605 | Msa1462010:intergenic | 65.0% | |
| AACGATGGCAGCAGCGGTGG+TGG | + | tig0041855:732-751 | Msa1462010:intergenic | 65.0% | |
| ! | CCGGTGGTGGCGCATGAGTA+TGG | - | tig0041855:1241-1260 | Msa1462010:CDS | 65.0% |
| ! | TGCCGTTTCGAGGGTCGTCG+TGG | + | tig0041855:418-437 | Msa1462010:intergenic | 65.0% |
| !! | GGCTGAACGGTGCCGTTTCG+AGG | + | tig0041855:428-447 | Msa1462010:intergenic | 65.0% |
| !! | TGCGACGGCGGTTTGGTGGT+GGG | + | tig0041855:513-532 | Msa1462010:intergenic | 65.0% |
| ! | TTCGTGCGACGGCGGTTTGG+TGG | + | tig0041855:517-536 | Msa1462010:intergenic | 65.0% |
| TTGGGCGGTGAGGATGGAGC+GGG | + | tig0041855:567-586 | Msa1462010:intergenic | 65.0% | |
| ! | GGTGGTTTGGGCGGTGAGGA+TGG | + | tig0041855:573-592 | Msa1462010:intergenic | 65.0% |
| TCCTCACCGCCCAAACCACC+TGG | - | tig0041855:573-592 | Msa1462010:CDS | 65.0% | |
| ! | GAGCTGCCAGGTGGTTTGGG+CGG | + | tig0041855:582-601 | Msa1462010:intergenic | 65.0% |
| GCGGAGCTGCCAGGTGGTTT+GGG | + | tig0041855:585-604 | Msa1462010:intergenic | 65.0% | |
| AGCGGAGCTGCCAGGTGGTT+TGG | + | tig0041855:586-605 | Msa1462010:intergenic | 65.0% | |
| AACGATGGCAGCAGCGGTGG+TGG | + | tig0041855:732-751 | Msa1462010:intergenic | 65.0% | |
| ! | CCGGTGGTGGCGCATGAGTA+TGG | - | tig0041855:1241-1260 | Msa1462010:CDS | 65.0% |
| !! | GTGCGACGGCGGTTTGGTGG+TGG | + | tig0041855:514-533 | Msa1462010:intergenic | 70.0% |
| TGGGCGGTGAGGATGGAGCG+GGG | + | tig0041855:566-585 | Msa1462010:intergenic | 70.0% | |
| ! | GCCAGGTGGTTTGGGCGGTG+AGG | + | tig0041855:577-596 | Msa1462010:intergenic | 70.0% |
| !! | GTGCGACGGCGGTTTGGTGG+TGG | + | tig0041855:514-533 | Msa1462010:intergenic | 70.0% |
| TGGGCGGTGAGGATGGAGCG+GGG | + | tig0041855:566-585 | Msa1462010:intergenic | 70.0% | |
| ! | GCCAGGTGGTTTGGGCGGTG+AGG | + | tig0041855:577-596 | Msa1462010:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041855 | gene | 404 | 1759 | 404 | ID=Msa1462010;Name=Msa1462010 |
| tig0041855 | mRNA | 404 | 1759 | 404 | ID=Msa1462010-mRNA-1;Parent=Msa1462010;Name=Msa1462010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|451 |
| tig0041855 | exon | 404 | 1759 | 404 | ID=Msa1462010-mRNA-1:exon:23456;Parent=Msa1462010-mRNA-1 |
| tig0041855 | CDS | 404 | 1759 | 404 | ID=Msa1462010-mRNA-1:cds;Parent=Msa1462010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
