Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356820 | XP_003591309.1 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356820 | sp|Q9M1R1|LCYD1_ARATH | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356820 | G7IBQ9 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1356820 | Msa1422900 | 0.809103 | 2.232642e-50 | -8.615850e-47 |
| Msa1356820 | Msa1462010 | 0.985363 | 2.475024e-163 | -8.615850e-47 |
| Msa0335740 | Msa1356820 | 0.801264 | 9.773850e-49 | -8.615850e-47 |
| Msa1198870 | Msa1356820 | 0.806848 | 6.737951e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356820 | MtrunA17_Chr1g0193981 | 96.659 | 449 | 15 | 0 | 3 | 451 | 2 | 450 | 0.0 | 903 |
| Msa1356820 | MtrunA17_Chr7g0271361 | 60.179 | 447 | 165 | 4 | 10 | 450 | 16 | 455 | 0.0 | 563 |
| Msa1356820 | MtrunA17_Chr1g0193181 | 58.036 | 448 | 176 | 5 | 5 | 448 | 4 | 443 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356820 | AT3G62130.1 | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Msa1356820 | AT3G62130.2 | 64.889 | 450 | 148 | 2 | 1 | 449 | 12 | 452 | 0.0 | 635 |
| Msa1356820 | AT5G26600.1 | 60.179 | 447 | 164 | 4 | 10 | 448 | 33 | 473 | 0.0 | 530 |
| Msa1356820 | AT5G26600.2 | 60.179 | 447 | 164 | 4 | 10 | 448 | 33 | 473 | 0.0 | 530 |
Find 133 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGTATGGTTGTGAAAA+TGG | 0.157149 | tig0015874:+1227 | Msa1356820:CDS |
| ATGTTAGTAATTTGTATAAA+TGG | 0.173706 | tig0015874:+986 | Msa1356820:CDS |
| GCTTGTGGTGCCGTCGATTA+TGG | 0.241155 | tig0015874:+1155 | Msa1356820:CDS |
| TGAGGTTGAATTACCGTTTC+CGG | 0.253269 | tig0015874:+723 | Msa1356820:CDS |
| GACTGCAATTATTCAGCTTT+TGG | 0.256976 | tig0015874:+1536 | Msa1356820:CDS |
| TTCCGGTTAGGGAATTGATT+AGG | 0.279390 | tig0015874:+866 | Msa1356820:CDS |
| TGAAGTTCCTGTGTATTATC+AGG | 0.286901 | tig0015874:+1404 | Msa1356820:CDS |
| AGCGGAGCTGCCAGGTGGTT+TGG | 0.290209 | tig0015874:-420 | Msa1356820:intergenic |
| AATGTTGATGTTAAGGAAAT+TGG | 0.294275 | tig0015874:+952 | Msa1356820:CDS |
| ACACTGTTGATGATTATAAT+AGG | 0.298624 | tig0015874:+1508 | Msa1356820:CDS |
| GCGGAGCTGCCAGGTGGTTT+GGG | 0.312446 | tig0015874:-419 | Msa1356820:intergenic |
| GTTGATGGTGCTCATGCTTT+AGG | 0.316255 | tig0015874:+922 | Msa1356820:CDS |
| TGATTATTCAGTCACTCTTT+AGG | 0.324233 | tig0015874:-1585 | Msa1356820:intergenic |
| GATAAGGATGGGTTTATAAC+TGG | 0.327185 | tig0015874:+1456 | Msa1356820:CDS |
| ATCATACTCGCACACATTTC+AGG | 0.329450 | tig0015874:-1294 | Msa1356820:intergenic |
| TCCGGTTAGGGAATTGATTA+GGG | 0.334111 | tig0015874:+867 | Msa1356820:CDS |
| CGACGTCATCGGCATTGATT+AGG | 0.342101 | tig0015874:-519 | Msa1356820:intergenic |
| AAATTATAACACTGTCATTT+CGG | 0.342626 | tig0015874:-630 | Msa1356820:intergenic |
| AGATTAACGGTGGGAGAGTT+AGG | 0.343995 | tig0015874:+800 | Msa1356820:CDS |
| TGGTTTGCCTTCAAAGATTC+GGG | 0.346535 | tig0015874:+1323 | Msa1356820:CDS |
| AAGTTTGAATGTTGATGTTA+AGG | 0.365457 | tig0015874:+945 | Msa1356820:CDS |
| ATTTCCTCGTTGGAATTAAC+CGG | 0.370491 | tig0015874:-742 | Msa1356820:intergenic |
| CAAGCGTGGGGTACAAATCT+TGG | 0.376935 | tig0015874:+1264 | Msa1356820:CDS |
| ATGATGATGCTTCGAGGTTA+AGG | 0.380388 | tig0015874:+1355 | Msa1356820:CDS |
| TTCAGTTGTTATTCCGGTTA+GGG | 0.382319 | tig0015874:+855 | Msa1356820:CDS |
| TTGGTTTGCCTTCAAAGATT+CGG | 0.383079 | tig0015874:+1322 | Msa1356820:CDS |
| CTTCAGTTGTTATTCCGGTT+AGG | 0.388055 | tig0015874:+854 | Msa1356820:CDS |
| GTGCGACGGCGGTTTGGTGG+TGG | 0.388236 | tig0015874:-348 | Msa1356820:intergenic |
| CCGGTGGTGGCGCATGAGTA+TGG | 0.390433 | tig0015874:+1078 | Msa1356820:CDS |
| GTTTGCCTGCTGAGAGTGCT+TGG | 0.391339 | tig0015874:+1106 | Msa1356820:CDS |
| GGCTGAACGGTGCCGTTTCG+AGG | 0.394109 | tig0015874:-262 | Msa1356820:intergenic |
| CTGCTGAGAGTGCTTGGGTT+GGG | 0.396233 | tig0015874:+1112 | Msa1356820:CDS |
| GTCATTTCGGCAGAACTTAC+CGG | 0.396727 | tig0015874:-617 | Msa1356820:intergenic |
| AAGAAGTTCGTGTGAGGAAA+TGG | 0.397728 | tig0015874:-314 | Msa1356820:intergenic |
| ACCCTAATCAATTCCCTAAC+CGG | 0.397893 | tig0015874:-868 | Msa1356820:intergenic |
| GATGCCTTCAGTTGTTATTC+CGG | 0.407025 | tig0015874:+849 | Msa1356820:CDS |
| TTATGTGAGGATTTCTCATC+AGG | 0.407288 | tig0015874:+1479 | Msa1356820:CDS |
| CGGTTTGAAGGTGGAATTGA+AGG | 0.407550 | tig0015874:+1189 | Msa1356820:CDS |
| CGAATCAACAACGGCAGCTT+CGG | 0.409299 | tig0015874:+370 | Msa1356820:CDS |
| GGTGGTTTGGGCGGTGAGGA+TGG | 0.410822 | tig0015874:-407 | Msa1356820:intergenic |
| CGAAATTTCTTCGACGTCAT+CGG | 0.417067 | tig0015874:-530 | Msa1356820:intergenic |
| GAAATGGAGTGAGTGAGTTT+TGG | 0.421190 | tig0015874:-298 | Msa1356820:intergenic |
| AACGATGGCAGCAGCGGTGG+TGG | 0.434975 | tig0015874:-566 | Msa1356820:intergenic |
| CATGGTATGGTTGTGAAAAT+GGG | 0.436733 | tig0015874:+1228 | Msa1356820:CDS |
| CTCATCACCCGAATCTTTGA+AGG | 0.440821 | tig0015874:-1330 | Msa1356820:intergenic |
| TTTGCCTGCTGAGAGTGCTT+GGG | 0.445854 | tig0015874:+1107 | Msa1356820:CDS |
| CCTGCTGAGAGTGCTTGGGT+TGG | 0.453877 | tig0015874:+1111 | Msa1356820:CDS |
| TGATTCGTGCGACGGCGGTT+TGG | 0.456057 | tig0015874:-354 | Msa1356820:intergenic |
| TTTGGGCGGTGAGGATGGAG+CGG | 0.462678 | tig0015874:-402 | Msa1356820:intergenic |
| TTGGGCGGTGAGGATGGAGC+GGG | 0.468335 | tig0015874:-401 | Msa1356820:intergenic |
| GCCATCGTTCTTCAACAAAT+CGG | 0.471082 | tig0015874:+580 | Msa1356820:CDS |
| TGCGACGGCGGTTTGGTGGT+GGG | 0.473641 | tig0015874:-347 | Msa1356820:intergenic |
| ATTGAAGGAGGGAAGATTAA+CGG | 0.474227 | tig0015874:+787 | Msa1356820:CDS |
| ATTATCGCGGAGTTTAAGAA+AGG | 0.474569 | tig0015874:+763 | Msa1356820:CDS |
| ATTGATTAGGGTTTGTAGAG+AGG | 0.478025 | tig0015874:+879 | Msa1356820:CDS |
| TGTGCGAGTATGATTATGAT+TGG | 0.478342 | tig0015874:+1303 | Msa1356820:CDS |
| TATTATCAGGCTTTGAGAAA+TGG | 0.484635 | tig0015874:+1417 | Msa1356820:CDS |
| GCCGTTGTTGATTCGTGCGA+CGG | 0.484870 | tig0015874:-362 | Msa1356820:intergenic |
| AAGCGTGGGGTACAAATCTT+GGG | 0.486188 | tig0015874:+1265 | Msa1356820:CDS |
| GGTTTGTAGAGAGGAAGAAG+TGG | 0.491671 | tig0015874:+888 | Msa1356820:CDS |
| TGGGCGGTGAGGATGGAGCG+GGG | 0.491672 | tig0015874:-400 | Msa1356820:intergenic |
| TGTCGGTGGCTCTGTTATTG+AGG | 0.492187 | tig0015874:+705 | Msa1356820:CDS |
| GGCTTTGAGAAATGGTGAAA+GGG | 0.495516 | tig0015874:+1425 | Msa1356820:CDS |
| TTTAAGAAAGGGATTGAAGG+AGG | 0.501661 | tig0015874:+775 | Msa1356820:CDS |
| CTCCGCGATAATTTCCTCGT+TGG | 0.502476 | tig0015874:-752 | Msa1356820:intergenic |
| ATTGAATGATGTTCATCATC+CGG | 0.504150 | tig0015874:+1059 | Msa1356820:CDS |
| CGATTATGGAGTTTGTGAAT+CGG | 0.507392 | tig0015874:+1169 | Msa1356820:CDS |
| TCGTTGGAATTAACCGGAAA+CGG | 0.508709 | tig0015874:-736 | Msa1356820:intergenic |
| GAGTTTGTGAATCGGTTTGA+AGG | 0.509546 | tig0015874:+1177 | Msa1356820:CDS |
| TCCTCACCGCCCAAACCACC+TGG | 0.513224 | tig0015874:+410 | Msa1356820:CDS |
| GCTGAACGGTGCCGTTTCGA+GGG | 0.516516 | tig0015874:-261 | Msa1356820:intergenic |
| TTGAAGAAAGCGGAGCTGCC+AGG | 0.524309 | tig0015874:-428 | Msa1356820:intergenic |
| TACATAAACGCAACCGAAGG+TGG | 0.527019 | tig0015874:-1018 | Msa1356820:intergenic |
| TTAAGAAAGGGATTGAAGGA+GGG | 0.529552 | tig0015874:+776 | Msa1356820:CDS |
| CCATACTCATGCGCCACCAC+CGG | 0.531694 | tig0015874:-1078 | Msa1356820:intergenic |
| TTCGTGCGACGGCGGTTTGG+TGG | 0.534624 | tig0015874:-351 | Msa1356820:intergenic |
| TTTGTGAATCGGTTTGAAGG+TGG | 0.538570 | tig0015874:+1180 | Msa1356820:CDS |
| TGAAAGGGATGCTAGAGATA+AGG | 0.538653 | tig0015874:+1440 | Msa1356820:CDS |
| CCAACCCAAGCACTCTCAGC+AGG | 0.539864 | tig0015874:-1111 | Msa1356820:intergenic |
| AACCACGACGACCCTCGAAA+CGG | 0.539957 | tig0015874:+250 | Msa1356820:CDS |
| GGTTATGTTGAAGCAAGCGT+GGG | 0.542634 | tig0015874:+1251 | Msa1356820:CDS |
| AGGCTTTGAGAAATGGTGAA+AGG | 0.551471 | tig0015874:+1424 | Msa1356820:CDS |
| GAGTTTAAGAAAGGGATTGA+AGG | 0.553891 | tig0015874:+772 | Msa1356820:CDS |
| TTTCTTTGAGTCTGGCTGAA+CGG | 0.554785 | tig0015874:-275 | Msa1356820:intergenic |
| AGGGATGCTAGAGATAAGGA+TGG | 0.555067 | tig0015874:+1444 | Msa1356820:CDS |
| GAGAATCGAGGATTCCGTTA+CGG | 0.559303 | tig0015874:-480 | Msa1356820:intergenic |
| TTATCGCGGAGTTTAAGAAA+GGG | 0.562582 | tig0015874:+764 | Msa1356820:CDS |
| TTCTTCAACACCCTCCGTAA+CGG | 0.565314 | tig0015874:+466 | Msa1356820:CDS |
| AAGAACGATGGCAGCAGCGG+TGG | 0.568006 | tig0015874:-569 | Msa1356820:intergenic |
| GGGTTATGTTGAAGCAAGCG+TGG | 0.571041 | tig0015874:+1250 | Msa1356820:CDS |
| GTGTTGAAGAAGAAGTCGTC+GGG | 0.572806 | tig0015874:-454 | Msa1356820:intergenic |
| GGTTTATAACTGGTTATGTG+AGG | 0.576418 | tig0015874:+1466 | Msa1356820:CDS |
| TGATGTTCATCATCCGGTGG+TGG | 0.581615 | tig0015874:+1065 | Msa1356820:CDS |
| TATGAAGAGGAACCATGGTA+TGG | 0.587034 | tig0015874:+1215 | Msa1356820:CDS |
| AGATTATAGTCCTCAGCTTG+TGG | 0.589039 | tig0015874:+1140 | Msa1356820:CDS |
| GGGATGCTAGAGATAAGGAT+GGG | 0.591264 | tig0015874:+1445 | Msa1356820:CDS |
| AAGGAGGGAAGATTAACGGT+GGG | 0.591432 | tig0015874:+791 | Msa1356820:CDS |
| GGTTTGAAGGTGGAATTGAA+GGG | 0.591604 | tig0015874:+1190 | Msa1356820:CDS |
| TCAATAACAGAGCCACCGAC+AGG | 0.591984 | tig0015874:-703 | Msa1356820:intergenic |
| GCCGATTTGTTGAAGAACGA+TGG | 0.592414 | tig0015874:-581 | Msa1356820:intergenic |
| GCCAGGTGGTTTGGGCGGTG+AGG | 0.592834 | tig0015874:-411 | Msa1356820:intergenic |
| GAGCTGCCAGGTGGTTTGGG+CGG | 0.593495 | tig0015874:-416 | Msa1356820:intergenic |
| GTGGCGCATGAGTATGGTAA+TGG | 0.597378 | tig0015874:+1084 | Msa1356820:CDS |
| GAAGCTTATGTTATACCTGT+CGG | 0.603444 | tig0015874:+688 | Msa1356820:CDS |
| GAAGGAGGGAAGATTAACGG+TGG | 0.604748 | tig0015874:+790 | Msa1356820:CDS |
| TTGAAGAACGATGGCAGCAG+CGG | 0.609909 | tig0015874:-572 | Msa1356820:intergenic |
| ATGGTATGGTTGTGAAAATG+GGG | 0.613792 | tig0015874:+1229 | Msa1356820:CDS |
| ATCGACGGCACCACAAGCTG+AGG | 0.616159 | tig0015874:-1150 | Msa1356820:intergenic |
| CTCAAAGCCTGATAATACAC+AGG | 0.617796 | tig0015874:-1411 | Msa1356820:intergenic |
| TAACAGCTTGATAAGCACAA+TGG | 0.618335 | tig0015874:-654 | Msa1356820:intergenic |
| GTTGTTGATTCGTGCGACGG+CGG | 0.618562 | tig0015874:-359 | Msa1356820:intergenic |
| TGAGTGATGATGATGCTTCG+AGG | 0.619097 | tig0015874:+1349 | Msa1356820:CDS |
| GGTGTTGAAGAAGAAGTCGT+CGG | 0.621265 | tig0015874:-455 | Msa1356820:intergenic |
| CTAACCGGAATAACAACTGA+AGG | 0.626000 | tig0015874:-853 | Msa1356820:intergenic |
| ATCGAGGATTCCGTTACGGA+GGG | 0.629759 | tig0015874:-476 | Msa1356820:intergenic |
| ACTTACCGGAGGAAAATTGA+CGG | 0.631633 | tig0015874:-603 | Msa1356820:intergenic |
| TTCACAAACTCCATAATCGA+CGG | 0.638906 | tig0015874:-1165 | Msa1356820:intergenic |
| GAATTGAAGGGATTATGAAG+AGG | 0.640801 | tig0015874:+1202 | Msa1356820:CDS |
| TTCGTGAAGAAGTTCGTGTG+AGG | 0.642301 | tig0015874:-320 | Msa1356820:intergenic |
| CGTCGGGTTGTTGAAGAAAG+CGG | 0.644114 | tig0015874:-438 | Msa1356820:intergenic |
| GGGATTATGAAGAGGAACCA+TGG | 0.650885 | tig0015874:+1210 | Msa1356820:CDS |
| CAATACATAAACGCAACCGA+AGG | 0.652956 | tig0015874:-1021 | Msa1356820:intergenic |
| AATCGAGGATTCCGTTACGG+AGG | 0.662241 | tig0015874:-477 | Msa1356820:intergenic |
| TTCCAACGAGGAAATTATCG+CGG | 0.665860 | tig0015874:+750 | Msa1356820:CDS |
| GCTTATGTTATACCTGTCGG+TGG | 0.674775 | tig0015874:+691 | Msa1356820:CDS |
| GTTATGTTGAAGCAAGCGTG+GGG | 0.691208 | tig0015874:+1252 | Msa1356820:CDS |
| AAGAAAGCGGAGCTGCCAGG+TGG | 0.699750 | tig0015874:-425 | Msa1356820:intergenic |
| ATTTCGGCAGAACTTACCGG+AGG | 0.711142 | tig0015874:-614 | Msa1356820:intergenic |
| GAATGATGTTCATCATCCGG+TGG | 0.719802 | tig0015874:+1062 | Msa1356820:CDS |
| GCCGTCGCACGAATCAACAA+CGG | 0.725169 | tig0015874:+361 | Msa1356820:CDS |
| ATACTCGCACACATTTCAGG+CGG | 0.737674 | tig0015874:-1291 | Msa1356820:intergenic |
| TGGTATGGTTGTGAAAATGG+GGG | 0.742084 | tig0015874:+1230 | Msa1356820:CDS |
| GTTTCCGGTTAATTCCAACG+AGG | 0.797229 | tig0015874:+738 | Msa1356820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAGTAATTTGTATAAA+TGG | + | tig0015874:986-1005 | Msa1356820:CDS | 15.0% |
| !!! | ATGTTAGTAATTTGTATAAA+TGG | + | tig0015874:986-1005 | Msa1356820:CDS | 15.0% |
| !!! | AAATTATAACACTGTCATTT+CGG | - | tig0015874:633-652 | Msa1356820:intergenic | 20.0% |
| !!! | AAATTATAACACTGTCATTT+CGG | - | tig0015874:633-652 | Msa1356820:intergenic | 20.0% |
| ! | AAGTTTGAATGTTGATGTTA+AGG | + | tig0015874:945-964 | Msa1356820:CDS | 25.0% |
| ! | AATGTTGATGTTAAGGAAAT+TGG | + | tig0015874:952-971 | Msa1356820:CDS | 25.0% |
| !!! | ACACTGTTGATGATTATAAT+AGG | + | tig0015874:1508-1527 | Msa1356820:CDS | 25.0% |
| ! | AAGTTTGAATGTTGATGTTA+AGG | + | tig0015874:945-964 | Msa1356820:CDS | 25.0% |
| ! | AATGTTGATGTTAAGGAAAT+TGG | + | tig0015874:952-971 | Msa1356820:CDS | 25.0% |
| !!! | ACACTGTTGATGATTATAAT+AGG | + | tig0015874:1508-1527 | Msa1356820:CDS | 25.0% |
| ATTGAATGATGTTCATCATC+CGG | + | tig0015874:1059-1078 | Msa1356820:CDS | 30.0% | |
| !! | GAGGTTAAGGTTTTATCTTA+GGG | + | tig0015874:1368-1387 | Msa1356820:CDS | 30.0% |
| !! | TATTATCAGGCTTTGAGAAA+TGG | + | tig0015874:1417-1436 | Msa1356820:CDS | 30.0% |
| !! | ATTATTCAGCTTTTGGAAGA+TGG | + | tig0015874:1543-1562 | Msa1356820:CDS | 30.0% |
| ATTGAATGATGTTCATCATC+CGG | + | tig0015874:1059-1078 | Msa1356820:CDS | 30.0% | |
| !! | GAGGTTAAGGTTTTATCTTA+GGG | + | tig0015874:1368-1387 | Msa1356820:CDS | 30.0% |
| !! | TATTATCAGGCTTTGAGAAA+TGG | + | tig0015874:1417-1436 | Msa1356820:CDS | 30.0% |
| !! | ATTATTCAGCTTTTGGAAGA+TGG | + | tig0015874:1543-1562 | Msa1356820:CDS | 30.0% |
| !!! | AGTTTTGGTTTCTTTGAGTC+TGG | - | tig0015874:286-305 | Msa1356820:intergenic | 35.0% |
| TAACAGCTTGATAAGCACAA+TGG | - | tig0015874:657-676 | Msa1356820:intergenic | 35.0% | |
| GAAGCTTATGTTATACCTGT+CGG | + | tig0015874:688-707 | Msa1356820:CDS | 35.0% | |
| ATTTCCTCGTTGGAATTAAC+CGG | - | tig0015874:745-764 | Msa1356820:intergenic | 35.0% | |
| ATTATCGCGGAGTTTAAGAA+AGG | + | tig0015874:763-782 | Msa1356820:CDS | 35.0% | |
| TTATCGCGGAGTTTAAGAAA+GGG | + | tig0015874:764-783 | Msa1356820:CDS | 35.0% | |
| GAGTTTAAGAAAGGGATTGA+AGG | + | tig0015874:772-791 | Msa1356820:CDS | 35.0% | |
| TTTAAGAAAGGGATTGAAGG+AGG | + | tig0015874:775-794 | Msa1356820:CDS | 35.0% | |
| TTAAGAAAGGGATTGAAGGA+GGG | + | tig0015874:776-795 | Msa1356820:CDS | 35.0% | |
| ATTGAAGGAGGGAAGATTAA+CGG | + | tig0015874:787-806 | Msa1356820:CDS | 35.0% | |
| ! | TTCAGTTGTTATTCCGGTTA+GGG | + | tig0015874:855-874 | Msa1356820:CDS | 35.0% |
| ATTGATTAGGGTTTGTAGAG+AGG | + | tig0015874:879-898 | Msa1356820:CDS | 35.0% | |
| ! | GTGGATCAGATTTTTGTTGA+TGG | + | tig0015874:907-926 | Msa1356820:CDS | 35.0% |
| TTCACAAACTCCATAATCGA+CGG | - | tig0015874:1168-1187 | Msa1356820:intergenic | 35.0% | |
| CGATTATGGAGTTTGTGAAT+CGG | + | tig0015874:1169-1188 | Msa1356820:CDS | 35.0% | |
| GAATTGAAGGGATTATGAAG+AGG | + | tig0015874:1202-1221 | Msa1356820:CDS | 35.0% | |
| CATGGTATGGTTGTGAAAAT+GGG | + | tig0015874:1228-1247 | Msa1356820:CDS | 35.0% | |
| ATGGTATGGTTGTGAAAATG+GGG | + | tig0015874:1229-1248 | Msa1356820:CDS | 35.0% | |
| TGTGCGAGTATGATTATGAT+TGG | + | tig0015874:1303-1322 | Msa1356820:CDS | 35.0% | |
| !! | TTGGTTTGCCTTCAAAGATT+CGG | + | tig0015874:1322-1341 | Msa1356820:CDS | 35.0% |
| !! | CGAGGTTAAGGTTTTATCTT+AGG | + | tig0015874:1367-1386 | Msa1356820:CDS | 35.0% |
| TGAAGTTCCTGTGTATTATC+AGG | + | tig0015874:1404-1423 | Msa1356820:CDS | 35.0% | |
| ! | GATAAGGATGGGTTTATAAC+TGG | + | tig0015874:1456-1475 | Msa1356820:CDS | 35.0% |
| GGTTTATAACTGGTTATGTG+AGG | + | tig0015874:1466-1485 | Msa1356820:CDS | 35.0% | |
| TTATGTGAGGATTTCTCATC+AGG | + | tig0015874:1479-1498 | Msa1356820:CDS | 35.0% | |
| ! | GACTGCAATTATTCAGCTTT+TGG | + | tig0015874:1536-1555 | Msa1356820:CDS | 35.0% |
| !!! | AGTTTTGGTTTCTTTGAGTC+TGG | - | tig0015874:286-305 | Msa1356820:intergenic | 35.0% |
| TAACAGCTTGATAAGCACAA+TGG | - | tig0015874:657-676 | Msa1356820:intergenic | 35.0% | |
| GAAGCTTATGTTATACCTGT+CGG | + | tig0015874:688-707 | Msa1356820:CDS | 35.0% | |
| ATTTCCTCGTTGGAATTAAC+CGG | - | tig0015874:745-764 | Msa1356820:intergenic | 35.0% | |
| ATTATCGCGGAGTTTAAGAA+AGG | + | tig0015874:763-782 | Msa1356820:CDS | 35.0% | |
| TTATCGCGGAGTTTAAGAAA+GGG | + | tig0015874:764-783 | Msa1356820:CDS | 35.0% | |
| GAGTTTAAGAAAGGGATTGA+AGG | + | tig0015874:772-791 | Msa1356820:CDS | 35.0% | |
| TTTAAGAAAGGGATTGAAGG+AGG | + | tig0015874:775-794 | Msa1356820:CDS | 35.0% | |
| TTAAGAAAGGGATTGAAGGA+GGG | + | tig0015874:776-795 | Msa1356820:CDS | 35.0% | |
| ATTGAAGGAGGGAAGATTAA+CGG | + | tig0015874:787-806 | Msa1356820:CDS | 35.0% | |
| ! | TTCAGTTGTTATTCCGGTTA+GGG | + | tig0015874:855-874 | Msa1356820:CDS | 35.0% |
| ATTGATTAGGGTTTGTAGAG+AGG | + | tig0015874:879-898 | Msa1356820:CDS | 35.0% | |
| ! | GTGGATCAGATTTTTGTTGA+TGG | + | tig0015874:907-926 | Msa1356820:CDS | 35.0% |
| TTCACAAACTCCATAATCGA+CGG | - | tig0015874:1168-1187 | Msa1356820:intergenic | 35.0% | |
| CGATTATGGAGTTTGTGAAT+CGG | + | tig0015874:1169-1188 | Msa1356820:CDS | 35.0% | |
| GAATTGAAGGGATTATGAAG+AGG | + | tig0015874:1202-1221 | Msa1356820:CDS | 35.0% | |
| CATGGTATGGTTGTGAAAAT+GGG | + | tig0015874:1228-1247 | Msa1356820:CDS | 35.0% | |
| ATGGTATGGTTGTGAAAATG+GGG | + | tig0015874:1229-1248 | Msa1356820:CDS | 35.0% | |
| TGTGCGAGTATGATTATGAT+TGG | + | tig0015874:1303-1322 | Msa1356820:CDS | 35.0% | |
| !! | TTGGTTTGCCTTCAAAGATT+CGG | + | tig0015874:1322-1341 | Msa1356820:CDS | 35.0% |
| !! | CGAGGTTAAGGTTTTATCTT+AGG | + | tig0015874:1367-1386 | Msa1356820:CDS | 35.0% |
| TGAAGTTCCTGTGTATTATC+AGG | + | tig0015874:1404-1423 | Msa1356820:CDS | 35.0% | |
| ! | GATAAGGATGGGTTTATAAC+TGG | + | tig0015874:1456-1475 | Msa1356820:CDS | 35.0% |
| GGTTTATAACTGGTTATGTG+AGG | + | tig0015874:1466-1485 | Msa1356820:CDS | 35.0% | |
| TTATGTGAGGATTTCTCATC+AGG | + | tig0015874:1479-1498 | Msa1356820:CDS | 35.0% | |
| ! | GACTGCAATTATTCAGCTTT+TGG | + | tig0015874:1536-1555 | Msa1356820:CDS | 35.0% |
| TTTCTTTGAGTCTGGCTGAA+CGG | - | tig0015874:278-297 | Msa1356820:intergenic | 40.0% | |
| ! | GAAATGGAGTGAGTGAGTTT+TGG | - | tig0015874:301-320 | Msa1356820:intergenic | 40.0% |
| AAGAAGTTCGTGTGAGGAAA+TGG | - | tig0015874:317-336 | Msa1356820:intergenic | 40.0% | |
| ! | TGATGATTTTGCGAGAATCG+AGG | - | tig0015874:495-514 | Msa1356820:intergenic | 40.0% |
| CGAAATTTCTTCGACGTCAT+CGG | - | tig0015874:533-552 | Msa1356820:intergenic | 40.0% | |
| GCCATCGTTCTTCAACAAAT+CGG | + | tig0015874:580-599 | Msa1356820:CDS | 40.0% | |
| ACTTACCGGAGGAAAATTGA+CGG | - | tig0015874:606-625 | Msa1356820:intergenic | 40.0% | |
| TGAGGTTGAATTACCGTTTC+CGG | + | tig0015874:723-742 | Msa1356820:CDS | 40.0% | |
| TCGTTGGAATTAACCGGAAA+CGG | - | tig0015874:739-758 | Msa1356820:intergenic | 40.0% | |
| TTCCAACGAGGAAATTATCG+CGG | + | tig0015874:750-769 | Msa1356820:CDS | 40.0% | |
| ! | GATGCCTTCAGTTGTTATTC+CGG | + | tig0015874:849-868 | Msa1356820:CDS | 40.0% |
| CTAACCGGAATAACAACTGA+AGG | - | tig0015874:856-875 | Msa1356820:intergenic | 40.0% | |
| ! | CTTCAGTTGTTATTCCGGTT+AGG | + | tig0015874:854-873 | Msa1356820:CDS | 40.0% |
| TTCCGGTTAGGGAATTGATT+AGG | + | tig0015874:866-885 | Msa1356820:CDS | 40.0% | |
| TCCGGTTAGGGAATTGATTA+GGG | + | tig0015874:867-886 | Msa1356820:CDS | 40.0% | |
| ACCCTAATCAATTCCCTAAC+CGG | - | tig0015874:871-890 | Msa1356820:intergenic | 40.0% | |
| !!! | ATGGTTTTTTTCGCCACCTT+CGG | + | tig0015874:1005-1024 | Msa1356820:CDS | 40.0% |
| CAATACATAAACGCAACCGA+AGG | - | tig0015874:1024-1043 | Msa1356820:intergenic | 40.0% | |
| AGATTATAGTCCTCAGCTTG+TGG | + | tig0015874:1140-1159 | Msa1356820:CDS | 40.0% | |
| !! | GAGTTTGTGAATCGGTTTGA+AGG | + | tig0015874:1177-1196 | Msa1356820:CDS | 40.0% |
| !! | TTTGTGAATCGGTTTGAAGG+TGG | + | tig0015874:1180-1199 | Msa1356820:CDS | 40.0% |
| GGTTTGAAGGTGGAATTGAA+GGG | + | tig0015874:1190-1209 | Msa1356820:CDS | 40.0% | |
| TATGAAGAGGAACCATGGTA+TGG | + | tig0015874:1215-1234 | Msa1356820:CDS | 40.0% | |
| ! | CCATTTTCACAACCATACCA+TGG | - | tig0015874:1230-1249 | Msa1356820:intergenic | 40.0% |
| CCATGGTATGGTTGTGAAAA+TGG | + | tig0015874:1227-1246 | Msa1356820:CDS | 40.0% | |
| TGGTATGGTTGTGAAAATGG+GGG | + | tig0015874:1230-1249 | Msa1356820:CDS | 40.0% | |
| ATCATACTCGCACACATTTC+AGG | - | tig0015874:1297-1316 | Msa1356820:intergenic | 40.0% | |
| ! | TGGTTTGCCTTCAAAGATTC+GGG | + | tig0015874:1323-1342 | Msa1356820:CDS | 40.0% |
| ! | ATGATGATGCTTCGAGGTTA+AGG | + | tig0015874:1355-1374 | Msa1356820:CDS | 40.0% |
| CTCAAAGCCTGATAATACAC+AGG | - | tig0015874:1414-1433 | Msa1356820:intergenic | 40.0% | |
| !! | AGGCTTTGAGAAATGGTGAA+AGG | + | tig0015874:1424-1443 | Msa1356820:CDS | 40.0% |
| !! | GGCTTTGAGAAATGGTGAAA+GGG | + | tig0015874:1425-1444 | Msa1356820:CDS | 40.0% |
| TGAAAGGGATGCTAGAGATA+AGG | + | tig0015874:1440-1459 | Msa1356820:CDS | 40.0% | |
| TTTCTTTGAGTCTGGCTGAA+CGG | - | tig0015874:278-297 | Msa1356820:intergenic | 40.0% | |
| ! | GAAATGGAGTGAGTGAGTTT+TGG | - | tig0015874:301-320 | Msa1356820:intergenic | 40.0% |
| AAGAAGTTCGTGTGAGGAAA+TGG | - | tig0015874:317-336 | Msa1356820:intergenic | 40.0% | |
| ! | TGATGATTTTGCGAGAATCG+AGG | - | tig0015874:495-514 | Msa1356820:intergenic | 40.0% |
| CGAAATTTCTTCGACGTCAT+CGG | - | tig0015874:533-552 | Msa1356820:intergenic | 40.0% | |
| GCCATCGTTCTTCAACAAAT+CGG | + | tig0015874:580-599 | Msa1356820:CDS | 40.0% | |
| ACTTACCGGAGGAAAATTGA+CGG | - | tig0015874:606-625 | Msa1356820:intergenic | 40.0% | |
| TGAGGTTGAATTACCGTTTC+CGG | + | tig0015874:723-742 | Msa1356820:CDS | 40.0% | |
| TCGTTGGAATTAACCGGAAA+CGG | - | tig0015874:739-758 | Msa1356820:intergenic | 40.0% | |
| TTCCAACGAGGAAATTATCG+CGG | + | tig0015874:750-769 | Msa1356820:CDS | 40.0% | |
| ! | GATGCCTTCAGTTGTTATTC+CGG | + | tig0015874:849-868 | Msa1356820:CDS | 40.0% |
| CTAACCGGAATAACAACTGA+AGG | - | tig0015874:856-875 | Msa1356820:intergenic | 40.0% | |
| ! | CTTCAGTTGTTATTCCGGTT+AGG | + | tig0015874:854-873 | Msa1356820:CDS | 40.0% |
| TTCCGGTTAGGGAATTGATT+AGG | + | tig0015874:866-885 | Msa1356820:CDS | 40.0% | |
| TCCGGTTAGGGAATTGATTA+GGG | + | tig0015874:867-886 | Msa1356820:CDS | 40.0% | |
| ACCCTAATCAATTCCCTAAC+CGG | - | tig0015874:871-890 | Msa1356820:intergenic | 40.0% | |
| !!! | ATGGTTTTTTTCGCCACCTT+CGG | + | tig0015874:1005-1024 | Msa1356820:CDS | 40.0% |
| CAATACATAAACGCAACCGA+AGG | - | tig0015874:1024-1043 | Msa1356820:intergenic | 40.0% | |
| AGATTATAGTCCTCAGCTTG+TGG | + | tig0015874:1140-1159 | Msa1356820:CDS | 40.0% | |
| !! | GAGTTTGTGAATCGGTTTGA+AGG | + | tig0015874:1177-1196 | Msa1356820:CDS | 40.0% |
| !! | TTTGTGAATCGGTTTGAAGG+TGG | + | tig0015874:1180-1199 | Msa1356820:CDS | 40.0% |
| GGTTTGAAGGTGGAATTGAA+GGG | + | tig0015874:1190-1209 | Msa1356820:CDS | 40.0% | |
| TATGAAGAGGAACCATGGTA+TGG | + | tig0015874:1215-1234 | Msa1356820:CDS | 40.0% | |
| ! | CCATTTTCACAACCATACCA+TGG | - | tig0015874:1230-1249 | Msa1356820:intergenic | 40.0% |
| CCATGGTATGGTTGTGAAAA+TGG | + | tig0015874:1227-1246 | Msa1356820:CDS | 40.0% | |
| TGGTATGGTTGTGAAAATGG+GGG | + | tig0015874:1230-1249 | Msa1356820:CDS | 40.0% | |
| ATCATACTCGCACACATTTC+AGG | - | tig0015874:1297-1316 | Msa1356820:intergenic | 40.0% | |
| ! | TGGTTTGCCTTCAAAGATTC+GGG | + | tig0015874:1323-1342 | Msa1356820:CDS | 40.0% |
| ! | ATGATGATGCTTCGAGGTTA+AGG | + | tig0015874:1355-1374 | Msa1356820:CDS | 40.0% |
| CTCAAAGCCTGATAATACAC+AGG | - | tig0015874:1414-1433 | Msa1356820:intergenic | 40.0% | |
| !! | AGGCTTTGAGAAATGGTGAA+AGG | + | tig0015874:1424-1443 | Msa1356820:CDS | 40.0% |
| !! | GGCTTTGAGAAATGGTGAAA+GGG | + | tig0015874:1425-1444 | Msa1356820:CDS | 40.0% |
| TGAAAGGGATGCTAGAGATA+AGG | + | tig0015874:1440-1459 | Msa1356820:CDS | 40.0% | |
| TTCGTGAAGAAGTTCGTGTG+AGG | - | tig0015874:323-342 | Msa1356820:intergenic | 45.0% | |
| GTGTTGAAGAAGAAGTCGTC+GGG | - | tig0015874:457-476 | Msa1356820:intergenic | 45.0% | |
| ! | GGTGTTGAAGAAGAAGTCGT+CGG | - | tig0015874:458-477 | Msa1356820:intergenic | 45.0% |
| TTCTTCAACACCCTCCGTAA+CGG | + | tig0015874:466-485 | Msa1356820:CDS | 45.0% | |
| GAGAATCGAGGATTCCGTTA+CGG | - | tig0015874:483-502 | Msa1356820:intergenic | 45.0% | |
| !! | GCCGATTTGTTGAAGAACGA+TGG | - | tig0015874:584-603 | Msa1356820:intergenic | 45.0% |
| GTCATTTCGGCAGAACTTAC+CGG | - | tig0015874:620-639 | Msa1356820:intergenic | 45.0% | |
| GCTTATGTTATACCTGTCGG+TGG | + | tig0015874:691-710 | Msa1356820:CDS | 45.0% | |
| GTTTCCGGTTAATTCCAACG+AGG | + | tig0015874:738-757 | Msa1356820:CDS | 45.0% | |
| AAGGAGGGAAGATTAACGGT+GGG | + | tig0015874:791-810 | Msa1356820:CDS | 45.0% | |
| AGATTAACGGTGGGAGAGTT+AGG | + | tig0015874:800-819 | Msa1356820:CDS | 45.0% | |
| GGTTTGTAGAGAGGAAGAAG+TGG | + | tig0015874:888-907 | Msa1356820:CDS | 45.0% | |
| !! | GTTGATGGTGCTCATGCTTT+AGG | + | tig0015874:922-941 | Msa1356820:CDS | 45.0% |
| TACATAAACGCAACCGAAGG+TGG | - | tig0015874:1021-1040 | Msa1356820:intergenic | 45.0% | |
| GAATGATGTTCATCATCCGG+TGG | + | tig0015874:1062-1081 | Msa1356820:CDS | 45.0% | |
| CGGTTTGAAGGTGGAATTGA+AGG | + | tig0015874:1189-1208 | Msa1356820:CDS | 45.0% | |
| GGGATTATGAAGAGGAACCA+TGG | + | tig0015874:1210-1229 | Msa1356820:CDS | 45.0% | |
| GGTTATGTTGAAGCAAGCGT+GGG | + | tig0015874:1251-1270 | Msa1356820:CDS | 45.0% | |
| GTTATGTTGAAGCAAGCGTG+GGG | + | tig0015874:1252-1271 | Msa1356820:CDS | 45.0% | |
| AAGCGTGGGGTACAAATCTT+GGG | + | tig0015874:1265-1284 | Msa1356820:CDS | 45.0% | |
| ATACTCGCACACATTTCAGG+CGG | - | tig0015874:1294-1313 | Msa1356820:intergenic | 45.0% | |
| CTCATCACCCGAATCTTTGA+AGG | - | tig0015874:1333-1352 | Msa1356820:intergenic | 45.0% | |
| ! | TGAGTGATGATGATGCTTCG+AGG | + | tig0015874:1349-1368 | Msa1356820:CDS | 45.0% |
| AGGGATGCTAGAGATAAGGA+TGG | + | tig0015874:1444-1463 | Msa1356820:CDS | 45.0% | |
| GGGATGCTAGAGATAAGGAT+GGG | + | tig0015874:1445-1464 | Msa1356820:CDS | 45.0% | |
| TTCGTGAAGAAGTTCGTGTG+AGG | - | tig0015874:323-342 | Msa1356820:intergenic | 45.0% | |
| GTGTTGAAGAAGAAGTCGTC+GGG | - | tig0015874:457-476 | Msa1356820:intergenic | 45.0% | |
| ! | GGTGTTGAAGAAGAAGTCGT+CGG | - | tig0015874:458-477 | Msa1356820:intergenic | 45.0% |
| TTCTTCAACACCCTCCGTAA+CGG | + | tig0015874:466-485 | Msa1356820:CDS | 45.0% | |
| GAGAATCGAGGATTCCGTTA+CGG | - | tig0015874:483-502 | Msa1356820:intergenic | 45.0% | |
| !! | GCCGATTTGTTGAAGAACGA+TGG | - | tig0015874:584-603 | Msa1356820:intergenic | 45.0% |
| GTCATTTCGGCAGAACTTAC+CGG | - | tig0015874:620-639 | Msa1356820:intergenic | 45.0% | |
| GCTTATGTTATACCTGTCGG+TGG | + | tig0015874:691-710 | Msa1356820:CDS | 45.0% | |
| GTTTCCGGTTAATTCCAACG+AGG | + | tig0015874:738-757 | Msa1356820:CDS | 45.0% | |
| AAGGAGGGAAGATTAACGGT+GGG | + | tig0015874:791-810 | Msa1356820:CDS | 45.0% | |
| AGATTAACGGTGGGAGAGTT+AGG | + | tig0015874:800-819 | Msa1356820:CDS | 45.0% | |
| GGTTTGTAGAGAGGAAGAAG+TGG | + | tig0015874:888-907 | Msa1356820:CDS | 45.0% | |
| !! | GTTGATGGTGCTCATGCTTT+AGG | + | tig0015874:922-941 | Msa1356820:CDS | 45.0% |
| TACATAAACGCAACCGAAGG+TGG | - | tig0015874:1021-1040 | Msa1356820:intergenic | 45.0% | |
| GAATGATGTTCATCATCCGG+TGG | + | tig0015874:1062-1081 | Msa1356820:CDS | 45.0% | |
| CGGTTTGAAGGTGGAATTGA+AGG | + | tig0015874:1189-1208 | Msa1356820:CDS | 45.0% | |
| GGGATTATGAAGAGGAACCA+TGG | + | tig0015874:1210-1229 | Msa1356820:CDS | 45.0% | |
| GGTTATGTTGAAGCAAGCGT+GGG | + | tig0015874:1251-1270 | Msa1356820:CDS | 45.0% | |
| GTTATGTTGAAGCAAGCGTG+GGG | + | tig0015874:1252-1271 | Msa1356820:CDS | 45.0% | |
| AAGCGTGGGGTACAAATCTT+GGG | + | tig0015874:1265-1284 | Msa1356820:CDS | 45.0% | |
| ATACTCGCACACATTTCAGG+CGG | - | tig0015874:1294-1313 | Msa1356820:intergenic | 45.0% | |
| CTCATCACCCGAATCTTTGA+AGG | - | tig0015874:1333-1352 | Msa1356820:intergenic | 45.0% | |
| ! | TGAGTGATGATGATGCTTCG+AGG | + | tig0015874:1349-1368 | Msa1356820:CDS | 45.0% |
| AGGGATGCTAGAGATAAGGA+TGG | + | tig0015874:1444-1463 | Msa1356820:CDS | 45.0% | |
| GGGATGCTAGAGATAAGGAT+GGG | + | tig0015874:1445-1464 | Msa1356820:CDS | 45.0% | |
| CGAATCAACAACGGCAGCTT+CGG | + | tig0015874:370-389 | Msa1356820:CDS | 50.0% | |
| ! | CGTCGGGTTGTTGAAGAAAG+CGG | - | tig0015874:441-460 | Msa1356820:intergenic | 50.0% |
| ATCGAGGATTCCGTTACGGA+GGG | - | tig0015874:479-498 | Msa1356820:intergenic | 50.0% | |
| AATCGAGGATTCCGTTACGG+AGG | - | tig0015874:480-499 | Msa1356820:intergenic | 50.0% | |
| !! | CGACGTCATCGGCATTGATT+AGG | - | tig0015874:522-541 | Msa1356820:intergenic | 50.0% |
| TTGAAGAACGATGGCAGCAG+CGG | - | tig0015874:575-594 | Msa1356820:intergenic | 50.0% | |
| ! | ATCGGCCGTCAATTTTCCTC+CGG | + | tig0015874:598-617 | Msa1356820:CDS | 50.0% |
| ATTTCGGCAGAACTTACCGG+AGG | - | tig0015874:617-636 | Msa1356820:intergenic | 50.0% | |
| TCAATAACAGAGCCACCGAC+AGG | - | tig0015874:706-725 | Msa1356820:intergenic | 50.0% | |
| ! | TGTCGGTGGCTCTGTTATTG+AGG | + | tig0015874:705-724 | Msa1356820:CDS | 50.0% |
| CTCCGCGATAATTTCCTCGT+TGG | - | tig0015874:755-774 | Msa1356820:intergenic | 50.0% | |
| GAAGGAGGGAAGATTAACGG+TGG | + | tig0015874:790-809 | Msa1356820:CDS | 50.0% | |
| TGATGTTCATCATCCGGTGG+TGG | + | tig0015874:1065-1084 | Msa1356820:CDS | 50.0% | |
| GTGGCGCATGAGTATGGTAA+TGG | + | tig0015874:1084-1103 | Msa1356820:CDS | 50.0% | |
| !! | TTTGCCTGCTGAGAGTGCTT+GGG | + | tig0015874:1107-1126 | Msa1356820:CDS | 50.0% |
| GGGTTATGTTGAAGCAAGCG+TGG | + | tig0015874:1250-1269 | Msa1356820:CDS | 50.0% | |
| CAAGCGTGGGGTACAAATCT+TGG | + | tig0015874:1264-1283 | Msa1356820:CDS | 50.0% | |
| CGAATCAACAACGGCAGCTT+CGG | + | tig0015874:370-389 | Msa1356820:CDS | 50.0% | |
| ! | CGTCGGGTTGTTGAAGAAAG+CGG | - | tig0015874:441-460 | Msa1356820:intergenic | 50.0% |
| ATCGAGGATTCCGTTACGGA+GGG | - | tig0015874:479-498 | Msa1356820:intergenic | 50.0% | |
| AATCGAGGATTCCGTTACGG+AGG | - | tig0015874:480-499 | Msa1356820:intergenic | 50.0% | |
| !! | CGACGTCATCGGCATTGATT+AGG | - | tig0015874:522-541 | Msa1356820:intergenic | 50.0% |
| TTGAAGAACGATGGCAGCAG+CGG | - | tig0015874:575-594 | Msa1356820:intergenic | 50.0% | |
| ! | ATCGGCCGTCAATTTTCCTC+CGG | + | tig0015874:598-617 | Msa1356820:CDS | 50.0% |
| ATTTCGGCAGAACTTACCGG+AGG | - | tig0015874:617-636 | Msa1356820:intergenic | 50.0% | |
| TCAATAACAGAGCCACCGAC+AGG | - | tig0015874:706-725 | Msa1356820:intergenic | 50.0% | |
| ! | TGTCGGTGGCTCTGTTATTG+AGG | + | tig0015874:705-724 | Msa1356820:CDS | 50.0% |
| CTCCGCGATAATTTCCTCGT+TGG | - | tig0015874:755-774 | Msa1356820:intergenic | 50.0% | |
| GAAGGAGGGAAGATTAACGG+TGG | + | tig0015874:790-809 | Msa1356820:CDS | 50.0% | |
| TGATGTTCATCATCCGGTGG+TGG | + | tig0015874:1065-1084 | Msa1356820:CDS | 50.0% | |
| GTGGCGCATGAGTATGGTAA+TGG | + | tig0015874:1084-1103 | Msa1356820:CDS | 50.0% | |
| !! | TTTGCCTGCTGAGAGTGCTT+GGG | + | tig0015874:1107-1126 | Msa1356820:CDS | 50.0% |
| GGGTTATGTTGAAGCAAGCG+TGG | + | tig0015874:1250-1269 | Msa1356820:CDS | 50.0% | |
| CAAGCGTGGGGTACAAATCT+TGG | + | tig0015874:1264-1283 | Msa1356820:CDS | 50.0% | |
| AACCACGACGACCCTCGAAA+CGG | + | tig0015874:250-269 | Msa1356820:CDS | 55.0% | |
| !! | GTTGTTGATTCGTGCGACGG+CGG | - | tig0015874:362-381 | Msa1356820:intergenic | 55.0% |
| GCCGTCGCACGAATCAACAA+CGG | + | tig0015874:361-380 | Msa1356820:CDS | 55.0% | |
| !! | GCCGTTGTTGATTCGTGCGA+CGG | - | tig0015874:365-384 | Msa1356820:intergenic | 55.0% |
| TTGAAGAAAGCGGAGCTGCC+AGG | - | tig0015874:431-450 | Msa1356820:intergenic | 55.0% | |
| !! | GTTTGCCTGCTGAGAGTGCT+TGG | + | tig0015874:1106-1125 | Msa1356820:CDS | 55.0% |
| !! | CTGCTGAGAGTGCTTGGGTT+GGG | + | tig0015874:1112-1131 | Msa1356820:CDS | 55.0% |
| !! | GCTTGTGGTGCCGTCGATTA+TGG | + | tig0015874:1155-1174 | Msa1356820:CDS | 55.0% |
| AACCACGACGACCCTCGAAA+CGG | + | tig0015874:250-269 | Msa1356820:CDS | 55.0% | |
| !! | GTTGTTGATTCGTGCGACGG+CGG | - | tig0015874:362-381 | Msa1356820:intergenic | 55.0% |
| GCCGTCGCACGAATCAACAA+CGG | + | tig0015874:361-380 | Msa1356820:CDS | 55.0% | |
| !! | GCCGTTGTTGATTCGTGCGA+CGG | - | tig0015874:365-384 | Msa1356820:intergenic | 55.0% |
| TTGAAGAAAGCGGAGCTGCC+AGG | - | tig0015874:431-450 | Msa1356820:intergenic | 55.0% | |
| !! | GTTTGCCTGCTGAGAGTGCT+TGG | + | tig0015874:1106-1125 | Msa1356820:CDS | 55.0% |
| !! | CTGCTGAGAGTGCTTGGGTT+GGG | + | tig0015874:1112-1131 | Msa1356820:CDS | 55.0% |
| !! | GCTTGTGGTGCCGTCGATTA+TGG | + | tig0015874:1155-1174 | Msa1356820:CDS | 55.0% |
| !! | GCTGAACGGTGCCGTTTCGA+GGG | - | tig0015874:264-283 | Msa1356820:intergenic | 60.0% |
| TGATTCGTGCGACGGCGGTT+TGG | - | tig0015874:357-376 | Msa1356820:intergenic | 60.0% | |
| TTTGGGCGGTGAGGATGGAG+CGG | - | tig0015874:405-424 | Msa1356820:intergenic | 60.0% | |
| AAGAAAGCGGAGCTGCCAGG+TGG | - | tig0015874:428-447 | Msa1356820:intergenic | 60.0% | |
| AAGAACGATGGCAGCAGCGG+TGG | - | tig0015874:572-591 | Msa1356820:intergenic | 60.0% | |
| CCATACTCATGCGCCACCAC+CGG | - | tig0015874:1081-1100 | Msa1356820:intergenic | 60.0% | |
| CCAACCCAAGCACTCTCAGC+AGG | - | tig0015874:1114-1133 | Msa1356820:intergenic | 60.0% | |
| !! | CCTGCTGAGAGTGCTTGGGT+TGG | + | tig0015874:1111-1130 | Msa1356820:CDS | 60.0% |
| ATCGACGGCACCACAAGCTG+AGG | - | tig0015874:1153-1172 | Msa1356820:intergenic | 60.0% | |
| !! | GCTGAACGGTGCCGTTTCGA+GGG | - | tig0015874:264-283 | Msa1356820:intergenic | 60.0% |
| TGATTCGTGCGACGGCGGTT+TGG | - | tig0015874:357-376 | Msa1356820:intergenic | 60.0% | |
| TTTGGGCGGTGAGGATGGAG+CGG | - | tig0015874:405-424 | Msa1356820:intergenic | 60.0% | |
| AAGAAAGCGGAGCTGCCAGG+TGG | - | tig0015874:428-447 | Msa1356820:intergenic | 60.0% | |
| AAGAACGATGGCAGCAGCGG+TGG | - | tig0015874:572-591 | Msa1356820:intergenic | 60.0% | |
| CCATACTCATGCGCCACCAC+CGG | - | tig0015874:1081-1100 | Msa1356820:intergenic | 60.0% | |
| CCAACCCAAGCACTCTCAGC+AGG | - | tig0015874:1114-1133 | Msa1356820:intergenic | 60.0% | |
| !! | CCTGCTGAGAGTGCTTGGGT+TGG | + | tig0015874:1111-1130 | Msa1356820:CDS | 60.0% |
| ATCGACGGCACCACAAGCTG+AGG | - | tig0015874:1153-1172 | Msa1356820:intergenic | 60.0% | |
| ! | TGCCGTTTCGAGGGTCGTCG+TGG | - | tig0015874:255-274 | Msa1356820:intergenic | 65.0% |
| !! | GGCTGAACGGTGCCGTTTCG+AGG | - | tig0015874:265-284 | Msa1356820:intergenic | 65.0% |
| !! | TGCGACGGCGGTTTGGTGGT+GGG | - | tig0015874:350-369 | Msa1356820:intergenic | 65.0% |
| ! | TTCGTGCGACGGCGGTTTGG+TGG | - | tig0015874:354-373 | Msa1356820:intergenic | 65.0% |
| TTGGGCGGTGAGGATGGAGC+GGG | - | tig0015874:404-423 | Msa1356820:intergenic | 65.0% | |
| ! | GGTGGTTTGGGCGGTGAGGA+TGG | - | tig0015874:410-429 | Msa1356820:intergenic | 65.0% |
| TCCTCACCGCCCAAACCACC+TGG | + | tig0015874:410-429 | Msa1356820:CDS | 65.0% | |
| ! | GAGCTGCCAGGTGGTTTGGG+CGG | - | tig0015874:419-438 | Msa1356820:intergenic | 65.0% |
| GCGGAGCTGCCAGGTGGTTT+GGG | - | tig0015874:422-441 | Msa1356820:intergenic | 65.0% | |
| AGCGGAGCTGCCAGGTGGTT+TGG | - | tig0015874:423-442 | Msa1356820:intergenic | 65.0% | |
| AACGATGGCAGCAGCGGTGG+TGG | - | tig0015874:569-588 | Msa1356820:intergenic | 65.0% | |
| ! | CCGGTGGTGGCGCATGAGTA+TGG | + | tig0015874:1078-1097 | Msa1356820:CDS | 65.0% |
| ! | TGCCGTTTCGAGGGTCGTCG+TGG | - | tig0015874:255-274 | Msa1356820:intergenic | 65.0% |
| !! | GGCTGAACGGTGCCGTTTCG+AGG | - | tig0015874:265-284 | Msa1356820:intergenic | 65.0% |
| !! | TGCGACGGCGGTTTGGTGGT+GGG | - | tig0015874:350-369 | Msa1356820:intergenic | 65.0% |
| ! | TTCGTGCGACGGCGGTTTGG+TGG | - | tig0015874:354-373 | Msa1356820:intergenic | 65.0% |
| TTGGGCGGTGAGGATGGAGC+GGG | - | tig0015874:404-423 | Msa1356820:intergenic | 65.0% | |
| ! | GGTGGTTTGGGCGGTGAGGA+TGG | - | tig0015874:410-429 | Msa1356820:intergenic | 65.0% |
| TCCTCACCGCCCAAACCACC+TGG | + | tig0015874:410-429 | Msa1356820:CDS | 65.0% | |
| ! | GAGCTGCCAGGTGGTTTGGG+CGG | - | tig0015874:419-438 | Msa1356820:intergenic | 65.0% |
| GCGGAGCTGCCAGGTGGTTT+GGG | - | tig0015874:422-441 | Msa1356820:intergenic | 65.0% | |
| AGCGGAGCTGCCAGGTGGTT+TGG | - | tig0015874:423-442 | Msa1356820:intergenic | 65.0% | |
| AACGATGGCAGCAGCGGTGG+TGG | - | tig0015874:569-588 | Msa1356820:intergenic | 65.0% | |
| ! | CCGGTGGTGGCGCATGAGTA+TGG | + | tig0015874:1078-1097 | Msa1356820:CDS | 65.0% |
| !! | GTGCGACGGCGGTTTGGTGG+TGG | - | tig0015874:351-370 | Msa1356820:intergenic | 70.0% |
| TGGGCGGTGAGGATGGAGCG+GGG | - | tig0015874:403-422 | Msa1356820:intergenic | 70.0% | |
| ! | GCCAGGTGGTTTGGGCGGTG+AGG | - | tig0015874:414-433 | Msa1356820:intergenic | 70.0% |
| !! | GTGCGACGGCGGTTTGGTGG+TGG | - | tig0015874:351-370 | Msa1356820:intergenic | 70.0% |
| TGGGCGGTGAGGATGGAGCG+GGG | - | tig0015874:403-422 | Msa1356820:intergenic | 70.0% | |
| ! | GCCAGGTGGTTTGGGCGGTG+AGG | - | tig0015874:414-433 | Msa1356820:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0015874 | gene | 241 | 1596 | 241 | ID=Msa1356820;Name=Msa1356820 |
| tig0015874 | mRNA | 241 | 1596 | 241 | ID=Msa1356820-mRNA-1;Parent=Msa1356820;Name=Msa1356820-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|451 |
| tig0015874 | exon | 241 | 1596 | 241 | ID=Msa1356820-mRNA-1:exon:10143;Parent=Msa1356820-mRNA-1 |
| tig0015874 | CDS | 241 | 1596 | 241 | ID=Msa1356820-mRNA-1:cds;Parent=Msa1356820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
