Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465130 | XP_024641077.2 | 99.081 | 544 | 5 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1099 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465130 | sp|Q7XA06|SYT3_ARATH | 64.954 | 545 | 179 | 4 | 1 | 541 | 1 | 537 | 0.0 | 703 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465130 | A0A396JT26 | 99.081 | 544 | 5 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1099 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084960 | Msa1465130 | 0.861774 | 8.102120e-64 | -8.615850e-47 |
| Msa0657120 | Msa1465130 | 0.802205 | 6.264025e-49 | -8.615850e-47 |
| Msa0527740 | Msa1465130 | 0.802483 | 5.490530e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465130 | MtrunA17_Chr1g0199571 | 99.081 | 544 | 5 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1099 |
| Msa1465130 | MtrunA17_Chr1g0156811 | 53.211 | 545 | 242 | 4 | 1 | 543 | 1 | 534 | 0.0 | 596 |
| Msa1465130 | MtrunA17_Chr4g0037111 | 59.317 | 322 | 130 | 1 | 17 | 338 | 17 | 337 | 4.47e-141 | 410 |
| Msa1465130 | MtrunA17_Chr4g0064531 | 30.309 | 518 | 321 | 14 | 53 | 541 | 51 | 557 | 1.39e-73 | 244 |
| Msa1465130 | MtrunA17_Chr7g0246311 | 32.278 | 474 | 286 | 14 | 3 | 453 | 4 | 465 | 1.20e-66 | 224 |
| Msa1465130 | MtrunA17_Chr8g0351231 | 31.920 | 401 | 251 | 11 | 11 | 395 | 1 | 395 | 7.72e-58 | 201 |
| Msa1465130 | MtrunA17_Chr4g0037121 | 48.276 | 203 | 97 | 2 | 343 | 544 | 1 | 196 | 3.90e-57 | 189 |
| Msa1465130 | MtrunA17_Chr3g0137471 | 25.381 | 591 | 346 | 21 | 21 | 541 | 17 | 582 | 2.61e-52 | 187 |
| Msa1465130 | MtrunA17_Chr4g0037181 | 40.336 | 119 | 58 | 3 | 343 | 460 | 1 | 107 | 1.27e-14 | 72.0 |
| Msa1465130 | MtrunA17_Chr2g0313621 | 23.288 | 292 | 195 | 10 | 67 | 335 | 72 | 357 | 2.88e-14 | 75.9 |
| Msa1465130 | MtrunA17_Chr8g0350031 | 31.410 | 156 | 97 | 3 | 259 | 414 | 2 | 147 | 9.97e-14 | 68.9 |
| Msa1465130 | MtrunA17_Chr4g0037821 | 23.986 | 296 | 188 | 8 | 69 | 333 | 204 | 493 | 1.76e-11 | 67.0 |
| Msa1465130 | MtrunA17_Chr7g0249671 | 45.122 | 82 | 41 | 4 | 461 | 540 | 1 | 80 | 2.88e-11 | 59.7 |
| Msa1465130 | MtrunA17_Chr8g0350021 | 30.573 | 157 | 97 | 4 | 259 | 414 | 2 | 147 | 3.41e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465130 | AT5G04220.2 | 64.954 | 545 | 179 | 4 | 1 | 541 | 1 | 537 | 0.0 | 703 |
| Msa1465130 | AT5G04220.3 | 66.667 | 483 | 149 | 4 | 63 | 541 | 1 | 475 | 0.0 | 651 |
| Msa1465130 | AT2G20990.1 | 53.102 | 548 | 245 | 5 | 1 | 544 | 1 | 540 | 0.0 | 609 |
| Msa1465130 | AT1G20080.2 | 51.565 | 543 | 253 | 4 | 1 | 542 | 1 | 534 | 0.0 | 597 |
| Msa1465130 | AT1G20080.3 | 51.565 | 543 | 253 | 4 | 1 | 542 | 1 | 534 | 0.0 | 597 |
| Msa1465130 | AT1G20080.4 | 51.565 | 543 | 253 | 4 | 1 | 542 | 1 | 534 | 0.0 | 597 |
| Msa1465130 | AT1G20080.1 | 51.565 | 543 | 253 | 4 | 1 | 542 | 1 | 534 | 0.0 | 597 |
| Msa1465130 | AT1G20080.5 | 51.565 | 543 | 253 | 4 | 1 | 542 | 1 | 534 | 0.0 | 597 |
| Msa1465130 | AT2G20990.2 | 50.874 | 572 | 245 | 6 | 1 | 544 | 1 | 564 | 0.0 | 595 |
| Msa1465130 | AT2G20990.3 | 49.659 | 586 | 245 | 6 | 1 | 544 | 1 | 578 | 0.0 | 591 |
| Msa1465130 | AT5G04220.1 | 65.109 | 321 | 100 | 4 | 225 | 541 | 3 | 315 | 5.04e-140 | 407 |
| Msa1465130 | AT1G05500.1 | 29.401 | 568 | 347 | 16 | 11 | 541 | 1 | 551 | 2.17e-77 | 254 |
| Msa1465130 | AT2G21010.1 | 45.725 | 269 | 129 | 5 | 279 | 544 | 1 | 255 | 3.90e-77 | 244 |
| Msa1465130 | AT3G61050.2 | 33.005 | 406 | 249 | 12 | 1 | 395 | 1 | 394 | 8.23e-59 | 204 |
| Msa1465130 | AT3G61050.1 | 33.005 | 406 | 249 | 12 | 1 | 395 | 1 | 394 | 8.23e-59 | 204 |
| Msa1465130 | AT1G05500.2 | 31.678 | 423 | 246 | 12 | 146 | 541 | 1 | 407 | 4.96e-56 | 194 |
| Msa1465130 | AT3G60950.1 | 27.961 | 304 | 160 | 10 | 71 | 367 | 39 | 290 | 1.70e-24 | 108 |
| Msa1465130 | AT3G61030.1 | 27.632 | 304 | 154 | 9 | 71 | 367 | 39 | 283 | 6.03e-23 | 102 |
| Msa1465130 | AT2G21040.1 | 50.649 | 77 | 37 | 1 | 425 | 500 | 15 | 91 | 1.55e-20 | 92.0 |
| Msa1465130 | AT1G50260.1 | 26.452 | 310 | 200 | 11 | 69 | 354 | 190 | 495 | 5.85e-15 | 78.6 |
| Msa1465130 | AT1G53590.1 | 24.149 | 323 | 214 | 10 | 67 | 365 | 68 | 383 | 3.96e-12 | 69.7 |
| Msa1465130 | AT1G70810.1 | 36.957 | 92 | 53 | 3 | 260 | 351 | 5 | 91 | 6.49e-11 | 61.6 |
| Msa1465130 | AT5G47710.1 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.82e-11 | 61.6 |
| Msa1465130 | AT5G47710.2 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.82e-11 | 61.6 |
| Msa1465130 | AT5G47710.3 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.82e-11 | 61.6 |
| Msa1465130 | AT5G47710.4 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.82e-11 | 61.6 |
| Msa1465130 | AT1G70800.1 | 37.624 | 101 | 58 | 4 | 251 | 351 | 5 | 100 | 7.12e-11 | 61.6 |
| Msa1465130 | AT1G70790.3 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.04e-11 | 61.6 |
| Msa1465130 | AT1G70790.2 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.04e-11 | 61.6 |
| Msa1465130 | AT1G70790.1 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.04e-11 | 61.6 |
Find 153 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACAGCCTCATGTGGATTT+TGG | 0.161713 | tig0044957:+2398 | Msa1465130:intron |
| TGCCCTCTAAACTTCTTATT+TGG | 0.168636 | tig0044957:-4209 | Msa1465130:intergenic |
| ATTCCTCTTGGTCTTCTTCT+TGG | 0.184387 | tig0044957:+681 | Msa1465130:CDS |
| CCCAATCATAGACTTGTAAT+TGG | 0.238477 | tig0044957:-3470 | Msa1465130:intergenic |
| GTTAGACCAATTAGTGAATT+AGG | 0.267667 | tig0044957:+926 | Msa1465130:CDS |
| CCAATGTATTCATCAAATAT+TGG | 0.269035 | tig0044957:-1272 | Msa1465130:intergenic |
| TAATGTATATATGGTGAATA+TGG | 0.269492 | tig0044957:-443 | Msa1465130:intergenic |
| GAATTTAATTAATGTATATA+TGG | 0.277942 | tig0044957:-452 | Msa1465130:intergenic |
| ATTTGATATGTGGCCTTTCT+TGG | 0.280149 | tig0044957:+1127 | Msa1465130:CDS |
| TTCTGCAGGTATGAAAGTTT+TGG | 0.282874 | tig0044957:+1980 | Msa1465130:intron |
| AAAGCAAACCCGCTCCTTCT+TGG | 0.286531 | tig0044957:-4349 | Msa1465130:intergenic |
| TGCAAGGTCAATACTATGTT+TGG | 0.291324 | tig0044957:-2056 | Msa1465130:intergenic |
| TTTGCAGTGATCACCTTTAG+AGG | 0.302647 | tig0044957:+4422 | Msa1465130:CDS |
| GGGATTCTTTGAAAGTTTCT+TGG | 0.303534 | tig0044957:+635 | Msa1465130:CDS |
| ACAGTTTCCGACGCAGTTTA+AGG | 0.304750 | tig0044957:-552 | Msa1465130:intergenic |
| TAATTCATGTTGAGATAAAA+TGG | 0.314770 | tig0044957:+5280 | Msa1465130:CDS |
| TCCAATTACAAGTCTATGAT+TGG | 0.315176 | tig0044957:+3469 | Msa1465130:CDS |
| CATTCCTTGAATTTATTAGA+TGG | 0.332392 | tig0044957:-5254 | Msa1465130:intergenic |
| AGTGGGCCTAATTCACTAAT+TGG | 0.335206 | tig0044957:-932 | Msa1465130:intergenic |
| TTATCTTTGGCCTCAGATCT+TGG | 0.336761 | tig0044957:+2785 | Msa1465130:CDS |
| TTCACCCAGAGAGGAATTTC+AGG | 0.340892 | tig0044957:-974 | Msa1465130:intergenic |
| GGAAACAAATGAAAAGGAAT+TGG | 0.343840 | tig0044957:+2001 | Msa1465130:CDS |
| AAGTTGCAAACCTTTATCTT+TGG | 0.347676 | tig0044957:+2772 | Msa1465130:CDS |
| TACGGCTTAAGCAGCTTTAG+AGG | 0.354225 | tig0044957:-4131 | Msa1465130:intergenic |
| AAACTAACTCTTTCGTAATC+AGG | 0.363663 | tig0044957:-1001 | Msa1465130:intergenic |
| ACGTTGATTCATCAAGAATA+GGG | 0.369250 | tig0044957:-2812 | Msa1465130:intergenic |
| TGGTCTTTATAGATTTGTTC+AGG | 0.370982 | tig0044957:+2457 | Msa1465130:CDS |
| CAAATTCCTCCTCTTGATAG+TGG | 0.371588 | tig0044957:-3388 | Msa1465130:intergenic |
| GCGGATAAGTTTAAGACCTT+TGG | 0.382540 | tig0044957:+2220 | Msa1465130:CDS |
| GGATTCTTTGAAAGTTTCTT+GGG | 0.384141 | tig0044957:+636 | Msa1465130:CDS |
| AGATCTGAGGCCAAAGATAA+AGG | 0.387195 | tig0044957:-2782 | Msa1465130:intergenic |
| GTCTATGAAGATCAAAGTTC+AGG | 0.394021 | tig0044957:+2085 | Msa1465130:CDS |
| TACGTTGATTCATCAAGAAT+AGG | 0.403364 | tig0044957:-2813 | Msa1465130:intergenic |
| ATTTACACTTGATTTGCTTA+AGG | 0.404829 | tig0044957:+4166 | Msa1465130:CDS |
| TTTGCTATTGGAATTCCTCT+TGG | 0.405196 | tig0044957:+669 | Msa1465130:CDS |
| TAACAAACTAAACCAGTGTA+TGG | 0.408278 | tig0044957:+5312 | Msa1465130:exon |
| GAGGCTCCTCTAGCATAAAC+TGG | 0.415645 | tig0044957:-4711 | Msa1465130:intergenic |
| TATGTCAAACTGAGCCTGAC+TGG | 0.419431 | tig0044957:+3342 | Msa1465130:CDS |
| ACTCCAAATAAGAAGTTTAG+AGG | 0.424971 | tig0044957:+4206 | Msa1465130:CDS |
| GACCGACTTACCACAAATAG+TGG | 0.427192 | tig0044957:-1351 | Msa1465130:intergenic |
| GCATGTTTCATCAGGTTGAT+TGG | 0.427787 | tig0044957:+1090 | Msa1465130:intron |
| TCATGGAACAAGTCATCAAA+TGG | 0.428179 | tig0044957:+2024 | Msa1465130:CDS |
| TTTGCTTTCAGTTGTGGTAC+AGG | 0.430496 | tig0044957:+4364 | Msa1465130:CDS |
| AAAGGTTGTGGTGTCTTTGA+TGG | 0.436285 | tig0044957:+2265 | Msa1465130:CDS |
| ATGGTGAATATGGCAAGAAA+TGG | 0.437997 | tig0044957:-433 | Msa1465130:intergenic |
| GCAAGGTCAATACTATGTTT+GGG | 0.443699 | tig0044957:-2055 | Msa1465130:intergenic |
| TTCATACTATCTTCTCTGAA+TGG | 0.445049 | tig0044957:-4257 | Msa1465130:intergenic |
| TTATGCCTGAAATTCCTCTC+TGG | 0.446224 | tig0044957:+969 | Msa1465130:CDS |
| ACTCTTCCTCCCACTATTTG+TGG | 0.446962 | tig0044957:+1341 | Msa1465130:CDS |
| TCACTAATTGGTCTAACAAC+AGG | 0.448248 | tig0044957:-920 | Msa1465130:intergenic |
| TAACAAAATGCAGGAATCCC+TGG | 0.449558 | tig0044957:+5173 | Msa1465130:intron |
| GTAAATTCTTTATTCTCATA+CGG | 0.450526 | tig0044957:-4149 | Msa1465130:intergenic |
| GTCAGGCTCAGTTTGACATA+TGG | 0.457579 | tig0044957:-3339 | Msa1465130:intergenic |
| TTCATTCCAACGTGGTTGAC+GGG | 0.462970 | tig0044957:-4683 | Msa1465130:intergenic |
| CTGGAAGTTTGTCCCCAGTC+AGG | 0.464687 | tig0044957:-3356 | Msa1465130:intergenic |
| AGAGAAGATAGTATGAAATT+CGG | 0.467927 | tig0044957:+4263 | Msa1465130:CDS |
| CTTCATTCCAACGTGGTTGA+CGG | 0.468702 | tig0044957:-4684 | Msa1465130:intergenic |
| AACAAAATGCAGGAATCCCT+GGG | 0.473300 | tig0044957:+5174 | Msa1465130:intron |
| AGCGGGTTTGCTTTCAGTTG+TGG | 0.476841 | tig0044957:+4358 | Msa1465130:CDS |
| CTGAGTGATGTGGTGCATAA+TGG | 0.477183 | tig0044957:+5213 | Msa1465130:CDS |
| AGTACCATCTAATAAATTCA+AGG | 0.478035 | tig0044957:+5250 | Msa1465130:CDS |
| TTAATTAAATTCATTCACTT+TGG | 0.482509 | tig0044957:+463 | Msa1465130:five_prime_UTR |
| CCAATATTTGATGAATACAT+TGG | 0.485232 | tig0044957:+1272 | Msa1465130:CDS |
| CCAATTACAAGTCTATGATT+GGG | 0.487047 | tig0044957:+3470 | Msa1465130:CDS |
| GGTACAACAAATAAAGCAAA+AGG | 0.489574 | tig0044957:-5379 | Msa1465130:intergenic |
| GGTTTAACGTTTGAAGGAAG+AGG | 0.490687 | tig0044957:-579 | Msa1465130:intergenic |
| GGATATGTCAGAAAGGATAG+TGG | 0.491916 | tig0044957:+4299 | Msa1465130:CDS |
| AATTGGAGAACTTGAGATTG+AGG | 0.492351 | tig0044957:-3453 | Msa1465130:intergenic |
| TTGAATTTCTCATTCCATTG+AGG | 0.492601 | tig0044957:-3414 | Msa1465130:intergenic |
| CCTTTAGAGGCGAAAAGAAA+AGG | 0.501075 | tig0044957:+4435 | Msa1465130:CDS |
| TCAAGTACCTTCTCCAAGAA+AGG | 0.503469 | tig0044957:-1140 | Msa1465130:intergenic |
| AACAAACTAAACCAGTGTAT+GGG | 0.506922 | tig0044957:+5313 | Msa1465130:exon |
| TTTGGGTTGGCGATATCTGG+AGG | 0.509662 | tig0044957:+2416 | Msa1465130:CDS |
| CTAAAGGTGATCACTGCAAA+GGG | 0.513629 | tig0044957:-4419 | Msa1465130:intergenic |
| ACCACAACCTTTGCAAAACA+TGG | 0.513949 | tig0044957:-2254 | Msa1465130:intergenic |
| GATTAATCTCCACATGCCCC+AGG | 0.514352 | tig0044957:-5191 | Msa1465130:intergenic |
| GAAATTCAAGATTGTTGTGA+AGG | 0.518827 | tig0044957:+3428 | Msa1465130:CDS |
| GGTTGGTGCACATGACAAGC+TGG | 0.526836 | tig0044957:+4094 | Msa1465130:intron |
| CATCTAATAAATTCAAGGAA+TGG | 0.529092 | tig0044957:+5255 | Msa1465130:CDS |
| GAACAAGTCATCAAATGGGC+TGG | 0.529916 | tig0044957:+2029 | Msa1465130:CDS |
| ATGTCAAACTGAGCCTGACT+GGG | 0.530491 | tig0044957:+3343 | Msa1465130:CDS |
| TTCTGAATCAAAGCAAGTCA+AGG | 0.530603 | tig0044957:+722 | Msa1465130:CDS |
| ATTGGAGAACTTGAGATTGA+GGG | 0.531440 | tig0044957:-3452 | Msa1465130:intergenic |
| TATGCCTGAAATTCCTCTCT+GGG | 0.532945 | tig0044957:+970 | Msa1465130:CDS |
| TATGTGGCCTTTCTTGGAGA+AGG | 0.533642 | tig0044957:+1133 | Msa1465130:CDS |
| GAGTTTGATCAATTGAGCCT+TGG | 0.533999 | tig0044957:+1317 | Msa1465130:CDS |
| GGAGGAATTTGAATCCTCAA+TGG | 0.534114 | tig0044957:+3400 | Msa1465130:CDS |
| CATTGGAAAGTATCAGATCA+AGG | 0.534156 | tig0044957:+1289 | Msa1465130:CDS |
| TTGGGTTGGCGATATCTGGA+GGG | 0.536736 | tig0044957:+2417 | Msa1465130:CDS |
| AAATGAAAAGGAATTGGTCA+TGG | 0.544170 | tig0044957:+2007 | Msa1465130:CDS |
| GCAGGAATCCCTGGGGCATG+TGG | 0.544730 | tig0044957:+5182 | Msa1465130:intron |
| ACAGGAGGCTGACGAAGTTG+AGG | 0.550573 | tig0044957:+4382 | Msa1465130:CDS |
| GCTTTCAGTTGTGGTACAGG+AGG | 0.553427 | tig0044957:+4367 | Msa1465130:CDS |
| TTCACATGTAATATTCCCAC+TGG | 0.557080 | tig0044957:-3264 | Msa1465130:intergenic |
| TGTTGAGATAAAATGGAAGG+TGG | 0.558509 | tig0044957:+5287 | Msa1465130:CDS |
| AAACCAAGAAGAAGACCAAG+AGG | 0.560579 | tig0044957:-684 | Msa1465130:intergenic |
| ACAAACTAAACCAGTGTATG+GGG | 0.565902 | tig0044957:+5314 | Msa1465130:exon |
| CATGGAACAAGTCATCAAAT+GGG | 0.569785 | tig0044957:+2025 | Msa1465130:CDS |
| CTCGCCACCTTAAACTGCGT+CGG | 0.571120 | tig0044957:+545 | Msa1465130:five_prime_UTR |
| TTTGTGTACAGGCAATTTGT+GGG | 0.575356 | tig0044957:+1228 | Msa1465130:intron |
| TGTGGTGTCTTTGATGGAGA+AGG | 0.577038 | tig0044957:+2271 | Msa1465130:CDS |
| ACGGCTTAAGCAGCTTTAGA+GGG | 0.581497 | tig0044957:-4130 | Msa1465130:intergenic |
| CAGGAGGCTGACGAAGTTGA+GGG | 0.583761 | tig0044957:+4383 | Msa1465130:CDS |
| GATGAGGTCCAAGAAGGAGC+GGG | 0.586490 | tig0044957:+4341 | Msa1465130:CDS |
| GTTCAATGTACAGCCTCATG+TGG | 0.586957 | tig0044957:+2391 | Msa1465130:intron |
| ATGTGTATCTTCTCATGTAG+AGG | 0.588189 | tig0044957:-4733 | Msa1465130:intergenic |
| CTCCAAATAAGAAGTTTAGA+GGG | 0.589712 | tig0044957:+4207 | Msa1465130:CDS |
| AGAATTCCAGTTTATGCTAG+AGG | 0.594294 | tig0044957:+4705 | Msa1465130:CDS |
| GGGGACATCATGTCAATACC+TGG | 0.598945 | tig0044957:+2437 | Msa1465130:CDS |
| GTTTCCGACGCAGTTTAAGG+TGG | 0.600902 | tig0044957:-549 | Msa1465130:intergenic |
| TCTAAAGGTGATCACTGCAA+AGG | 0.603963 | tig0044957:-4420 | Msa1465130:intergenic |
| GTTTAGAGGGCAAATTGTGG+TGG | 0.604850 | tig0044957:+4220 | Msa1465130:CDS |
| TCATGTTGAGATAAAATGGA+AGG | 0.606731 | tig0044957:+5284 | Msa1465130:CDS |
| TGTATCTTCTCATGTAGAGG+AGG | 0.608120 | tig0044957:-4730 | Msa1465130:intergenic |
| GAAGATAGTATGAAATTCGG+TGG | 0.610289 | tig0044957:+4266 | Msa1465130:CDS |
| AAATTCGGTGGATCGTCAGA+AGG | 0.610425 | tig0044957:+4278 | Msa1465130:CDS |
| GTCAGAAGGATATGTCAGAA+AGG | 0.615468 | tig0044957:+4292 | Msa1465130:CDS |
| GATGGTACTTGTCGTTAATG+CGG | 0.616891 | tig0044957:-5236 | Msa1465130:intergenic |
| GTTGGTGCACATGACAAGCT+GGG | 0.617725 | tig0044957:+4095 | Msa1465130:CDS |
| TCTGATGATGAGGTCCAAGA+AGG | 0.618375 | tig0044957:+4335 | Msa1465130:CDS |
| ACATCGAGGTCATGAGCAAG+AGG | 0.625854 | tig0044957:+4752 | Msa1465130:CDS |
| GGGAATATTACATGTGAATG+TGG | 0.627036 | tig0044957:+3269 | Msa1465130:CDS |
| ATAAGTTCTTGCAAAGCAAG+TGG | 0.630851 | tig0044957:-950 | Msa1465130:intergenic |
| CGAAGAAAACCACTATCAAG+AGG | 0.635234 | tig0044957:+3379 | Msa1465130:CDS |
| ACAAGTCTATGATTGGGACA+AGG | 0.641670 | tig0044957:+3476 | Msa1465130:CDS |
| GAAGTTTAGAGGGCAAATTG+TGG | 0.644875 | tig0044957:+4217 | Msa1465130:CDS |
| AGAAAACCCGTCAACCACGT+TGG | 0.649974 | tig0044957:+4677 | Msa1465130:CDS |
| TCAGGTGTCTTCACCCAGAG+AGG | 0.650472 | tig0044957:-983 | Msa1465130:intergenic |
| ATTAATCTCCACATGCCCCA+GGG | 0.650883 | tig0044957:-5190 | Msa1465130:intergenic |
| ACCGACTTACCACAAATAGT+GGG | 0.650915 | tig0044957:-1350 | Msa1465130:intergenic |
| TAAGTTCTTGCAAAGCAAGT+GGG | 0.651983 | tig0044957:-949 | Msa1465130:intergenic |
| GGAACTAAGAAAATTGTGAG+TGG | 0.652314 | tig0044957:-412 | Msa1465130:intergenic |
| TGATGAGGTCCAAGAAGGAG+CGG | 0.653990 | tig0044957:+4340 | Msa1465130:CDS |
| TGGGTTGGCGATATCTGGAG+GGG | 0.654158 | tig0044957:+2418 | Msa1465130:CDS |
| CTTCATAGACAACACATGCA+AGG | 0.656238 | tig0044957:-2072 | Msa1465130:intergenic |
| ATAGGGATTTCCAAGATCTG+AGG | 0.659945 | tig0044957:-2795 | Msa1465130:intergenic |
| AGGCGAAAAGAAAAGGACAA+AGG | 0.660070 | tig0044957:+4442 | Msa1465130:CDS |
| GGTAGCAATAAAGAAGCCAG+TGG | 0.667479 | tig0044957:+3248 | Msa1465130:CDS |
| TGATAGTGTATCTGATGATG+AGG | 0.667621 | tig0044957:+4325 | Msa1465130:CDS |
| AGAAAACCACTATCAAGAGG+AGG | 0.672004 | tig0044957:+3382 | Msa1465130:CDS |
| GCCAACCCAAAATCCACATG+AGG | 0.676621 | tig0044957:-2404 | Msa1465130:intergenic |
| CATGGAAGTGTAGACACCAA+AGG | 0.678495 | tig0044957:-2236 | Msa1465130:intergenic |
| GACTTACCACAAATAGTGGG+AGG | 0.682265 | tig0044957:-1347 | Msa1465130:intergenic |
| GTAGCAATAAAGAAGCCAGT+GGG | 0.689579 | tig0044957:+3249 | Msa1465130:CDS |
| TGAACAAATCTATAAAGACC+AGG | 0.696952 | tig0044957:-2455 | Msa1465130:intergenic |
| CAAACTAAACCAGTGTATGG+GGG | 0.702363 | tig0044957:+5315 | Msa1465130:three_prime_UTR |
| AAAGGTCTTAAACTTATCCG+CGG | 0.705412 | tig0044957:-2218 | Msa1465130:intergenic |
| TGTCAAACTGAGCCTGACTG+GGG | 0.720631 | tig0044957:+3344 | Msa1465130:CDS |
| TAGTGGGAGGAAGAGTACCA+AGG | 0.732119 | tig0044957:-1334 | Msa1465130:intergenic |
| GGAGATTAATCTGAGTGATG+TGG | 0.736278 | tig0044957:+5203 | Msa1465130:CDS |
| TGGAATTCTTCATTCCAACG+TGG | 0.738872 | tig0044957:-4691 | Msa1465130:intergenic |
| ACAAAATGCAGGAATCCCTG+GGG | 0.759341 | tig0044957:+5175 | Msa1465130:intron |
| ACATGAGAAGATACACATCG+AGG | 0.765764 | tig0044957:+4738 | Msa1465130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTTAATTAATGTATATA+TGG | - | tig0044957:455-474 | None:intergenic | 10.0% |
| !! | AAAATCAAAATAAATATTAG+AGG | - | tig0044957:2165-2184 | Msa1465130:intergenic | 10.0% |
| !! | TTAATTAAATTCATTCACTT+TGG | + | tig0044957:463-482 | Msa1465130:five_prime_UTR | 15.0% |
| !! | ATTAGATGATTATTGTTTAA+TGG | + | tig0044957:1195-1214 | Msa1465130:intron | 15.0% |
| !!! | AATTCATATATGTTCATTTT+AGG | - | tig0044957:1566-1585 | Msa1465130:intergenic | 15.0% |
| !!! | TTTTACAAATAATATATGCA+AGG | + | tig0044957:2926-2945 | Msa1465130:intron | 15.0% |
| !! | TATACGCAAAATAATTATTA+GGG | - | tig0044957:2999-3018 | Msa1465130:intergenic | 15.0% |
| !! | TTATACGCAAAATAATTATT+AGG | - | tig0044957:3000-3019 | Msa1465130:intergenic | 15.0% |
| !! | GTTAAATAGTAAAATAATTC+AGG | - | tig0044957:3080-3099 | Msa1465130:intergenic | 15.0% |
| !! | TAAATATGTGAAGAAAAATA+AGG | - | tig0044957:3225-3244 | Msa1465130:intergenic | 15.0% |
| !!! | ATTTTTCTTCACATATTTAT+AGG | + | tig0044957:3226-3245 | Msa1465130:intron | 15.0% |
| !!! | TTTTTCTTCACATATTTATA+GGG | + | tig0044957:3227-3246 | Msa1465130:intron | 15.0% |
| !!! | TCAAACTTTGTTTATAAAAT+TGG | + | tig0044957:3705-3724 | Msa1465130:intron | 15.0% |
| !! | TTATAAAATTGGAATCTTTA+TGG | + | tig0044957:3716-3735 | Msa1465130:intron | 15.0% |
| !! | CAAATTAAATAATACTAACT+TGG | - | tig0044957:4613-4632 | Msa1465130:intergenic | 15.0% |
| !!! | TTGCTTGAAAAAATTTATTT+TGG | + | tig0044957:4630-4649 | Msa1465130:intron | 15.0% |
| !!! | GAATTTTTTTAATTGTGATA+GGG | - | tig0044957:5066-5085 | Msa1465130:intergenic | 15.0% |
| !!! | TGAATTTTTTTAATTGTGAT+AGG | - | tig0044957:5067-5086 | Msa1465130:intergenic | 15.0% |
| !! | TAATGTATATATGGTGAATA+TGG | - | tig0044957:446-465 | None:intergenic | 20.0% |
| !! | AAACTGATAAAAACAAATGT+GGG | - | tig0044957:803-822 | Msa1465130:intergenic | 20.0% |
| !! | AAAACTGATAAAAACAAATG+TGG | - | tig0044957:804-823 | Msa1465130:intergenic | 20.0% |
| !!! | ACAAGTTTTTATTTGATATG+TGG | + | tig0044957:1117-1136 | Msa1465130:CDS | 20.0% |
| !! | TATGAATTGAATGAAATTAC+TGG | + | tig0044957:1578-1597 | Msa1465130:intron | 20.0% |
| !!! | ATTTATTTTACGTCTAGATT+GGG | - | tig0044957:1732-1751 | Msa1465130:intergenic | 20.0% |
| !! | AGTATATCGATATTTGATAA+GGG | - | tig0044957:1858-1877 | Msa1465130:intergenic | 20.0% |
| !! | AAGTATATCGATATTTGATA+AGG | - | tig0044957:1859-1878 | Msa1465130:intergenic | 20.0% |
| !!! | TATTTTCTAATTTTCTGTGA+GGG | - | tig0044957:2124-2143 | Msa1465130:intergenic | 20.0% |
| !!! | TTATTTTCTAATTTTCTGTG+AGG | - | tig0044957:2125-2144 | Msa1465130:intergenic | 20.0% |
| !!! | TTATTTTGATTTTTCTCAGT+TGG | + | tig0044957:2172-2191 | Msa1465130:intron | 20.0% |
| !! | AATTATTTATCAGATGAGAA+GGG | - | tig0044957:2369-2388 | Msa1465130:intergenic | 20.0% |
| !! | TAATTATTTATCAGATGAGA+AGG | - | tig0044957:2370-2389 | Msa1465130:intergenic | 20.0% |
| !! | GTTAAATGAAATTTACAACT+AGG | - | tig0044957:2528-2547 | Msa1465130:intergenic | 20.0% |
| !!! | TATGTTGACTTATCTAAATA+AGG | - | tig0044957:2963-2982 | Msa1465130:intergenic | 20.0% |
| !! | ATACGCAAAATAATTATTAG+GGG | - | tig0044957:2998-3017 | Msa1465130:intergenic | 20.0% |
| !! | TTCAAATATGACAATCTTAA+GGG | - | tig0044957:3618-3637 | Msa1465130:intergenic | 20.0% |
| !! | ATTCAAATATGACAATCTTA+AGG | - | tig0044957:3619-3638 | Msa1465130:intergenic | 20.0% |
| !! | TTAAGATTGTCATATTTGAA+TGG | + | tig0044957:3618-3637 | Msa1465130:intron | 20.0% |
| !! | AAACAAAGTTTGAAAATAAG+TGG | - | tig0044957:3698-3717 | Msa1465130:intergenic | 20.0% |
| !!! | AACCATACAATATTTTCAAA+CGG | + | tig0044957:3801-3820 | Msa1465130:intron | 20.0% |
| !! | GTAAATTCTTTATTCTCATA+CGG | - | tig0044957:4152-4171 | Msa1465130:intergenic | 20.0% |
| !!! | TTTTATGTAGTGACAAAAAT+TGG | - | tig0044957:4529-4548 | Msa1465130:intergenic | 20.0% |
| !! | TAATGAAGAGAAAAATGAAA+TGG | - | tig0044957:4805-4824 | Msa1465130:intergenic | 20.0% |
| !! | AAAGTTTCAAGAAATCTATT+AGG | - | tig0044957:4851-4870 | Msa1465130:intergenic | 20.0% |
| !! | ATAGATTTCTTGAAACTTTA+AGG | + | tig0044957:4852-4871 | Msa1465130:intron | 20.0% |
| !! | TAGATTTCTTGAAACTTTAA+GGG | + | tig0044957:4853-4872 | Msa1465130:intron | 20.0% |
| !!! | ACAATTTTTGGAATCATAAT+TGG | - | tig0044957:5093-5112 | Msa1465130:intergenic | 20.0% |
| !! | TAATTCATGTTGAGATAAAA+TGG | + | tig0044957:5280-5299 | Msa1465130:CDS | 20.0% |
| ! | AAAAATGGTTTAACGTTTGA+AGG | - | tig0044957:588-607 | Msa1465130:intergenic | 25.0% |
| !!! | TTTGATTTTTTGTTTGTTGC+AGG | + | tig0044957:895-914 | Msa1465130:intron | 25.0% |
| ! | CCAATGTATTCATCAAATAT+TGG | - | tig0044957:1275-1294 | Msa1465130:intergenic | 25.0% |
| ! | CCAATATTTGATGAATACAT+TGG | + | tig0044957:1272-1291 | Msa1465130:CDS | 25.0% |
| !!! | CTTCTAAAACAGTTGAATTT+CGG | - | tig0044957:1404-1423 | Msa1465130:intergenic | 25.0% |
| ! | AGAAATTTCATGTTAGTACA+TGG | + | tig0044957:1422-1441 | Msa1465130:intron | 25.0% |
| !! | TCTTATTGCTGATTATAGTT+TGG | + | tig0044957:1530-1549 | Msa1465130:intron | 25.0% |
| !! | TGATTATAGTTTGGCATTTT+GGG | + | tig0044957:1539-1558 | Msa1465130:intron | 25.0% |
| ! | GCAAATTGACATTATATTTG+TGG | + | tig0044957:1621-1640 | Msa1465130:intron | 25.0% |
| !!! | CATTTATTTTACGTCTAGAT+TGG | - | tig0044957:1733-1752 | Msa1465130:intergenic | 25.0% |
| ! | TTCAATCAAATATGAATCCT+TGG | + | tig0044957:1774-1793 | Msa1465130:intron | 25.0% |
| !!! | AGTTTTGGAAACAAATGAAA+AGG | + | tig0044957:1995-2014 | Msa1465130:CDS | 25.0% |
| ! | TTTCTTCTAATTTCACTTCT+CGG | + | tig0044957:2310-2329 | Msa1465130:intron | 25.0% |
| ! | ACTGAATATTAAATGTGCAT+AGG | - | tig0044957:2630-2649 | Msa1465130:intergenic | 25.0% |
| ! | TTTAATATTCAGTTCGTTGA+TGG | + | tig0044957:2637-2656 | Msa1465130:intron | 25.0% |
| !!! | CTTTTGAAAATGGATTTGTT+AGG | + | tig0044957:3306-3325 | Msa1465130:CDS | 25.0% |
| !!! | CTGGTTACTTTTTCAAATTT+TGG | + | tig0044957:3515-3534 | Msa1465130:intron | 25.0% |
| !!! | TGTCATATTTGAATGGATTA+TGG | + | tig0044957:3625-3644 | Msa1465130:intron | 25.0% |
| !!! | ATATTTGAATGGATTATGGA+TGG | + | tig0044957:3629-3648 | Msa1465130:intron | 25.0% |
| ! | TTCCGTTTGAAAATATTGTA+TGG | - | tig0044957:3806-3825 | Msa1465130:intergenic | 25.0% |
| !! | ATATTTTCAAACGGAAACTT+TGG | + | tig0044957:3810-3829 | Msa1465130:intron | 25.0% |
| !!! | GAATTTACCTTTTTTACTAG+AGG | + | tig0044957:3850-3869 | Msa1465130:intron | 25.0% |
| !!! | TTTCTTTGTTTTCTGTATGT+CGG | + | tig0044957:3902-3921 | Msa1465130:intron | 25.0% |
| ! | TTTCTTCTTCAAAGTTATGT+TGG | + | tig0044957:3942-3961 | Msa1465130:intron | 25.0% |
| ! | ACAGAGATGAAAAATAAGAT+TGG | - | tig0044957:4039-4058 | Msa1465130:intergenic | 25.0% |
| ! | CATATCATCAATGAATCAAA+TGG | - | tig0044957:4062-4081 | Msa1465130:intergenic | 25.0% |
| !!! | ATTTACACTTGATTTGCTTA+AGG | + | tig0044957:4166-4185 | Msa1465130:CDS | 25.0% |
| ! | AGAGAAGATAGTATGAAATT+CGG | + | tig0044957:4263-4282 | Msa1465130:CDS | 25.0% |
| !! | AAAGGTAAAATTTTCTCCTT+CGG | + | tig0044957:4460-4479 | Msa1465130:intron | 25.0% |
| ! | AAGAAATCTATTAGGACTTT+AGG | - | tig0044957:4843-4862 | Msa1465130:intergenic | 25.0% |
| !!! | GTTTAGCTTCTAACAATTTT+TGG | - | tig0044957:5105-5124 | Msa1465130:intergenic | 25.0% |
| ! | AGTACCATCTAATAAATTCA+AGG | + | tig0044957:5250-5269 | Msa1465130:CDS | 25.0% |
| ! | CATTCCTTGAATTTATTAGA+TGG | - | tig0044957:5257-5276 | Msa1465130:intergenic | 25.0% |
| ! | CATCTAATAAATTCAAGGAA+TGG | + | tig0044957:5255-5274 | Msa1465130:CDS | 25.0% |
| ! | GTAAAAACCAAAAACATTGT+TGG | - | tig0044957:5408-5427 | Msa1465130:intergenic | 25.0% |
| CAGAGCAATGAAGAAAAAAA+TGG | - | tig0044957:603-622 | Msa1465130:intergenic | 30.0% | |
| ! | CTTTCAAAGAATCCCATTTT+TGG | - | tig0044957:630-649 | Msa1465130:intergenic | 30.0% |
| ! | GGATTCTTTGAAAGTTTCTT+GGG | + | tig0044957:636-655 | Msa1465130:CDS | 30.0% |
| GTTAGACCAATTAGTGAATT+AGG | + | tig0044957:926-945 | Msa1465130:CDS | 30.0% | |
| AAACTAACTCTTTCGTAATC+AGG | - | tig0044957:1004-1023 | Msa1465130:intergenic | 30.0% | |
| TGATATTTGCATGTTTCATC+AGG | + | tig0044957:1082-1101 | Msa1465130:intron | 30.0% | |
| TACTTGATTCAGTGATCATA+TGG | + | tig0044957:1156-1175 | Msa1465130:intron | 30.0% | |
| ACTTGATTCAGTGATCATAT+GGG | + | tig0044957:1157-1176 | Msa1465130:intron | 30.0% | |
| !!! | GTGATTTTGTTTTTGTGTAC+AGG | + | tig0044957:1217-1236 | Msa1465130:intron | 30.0% |
| ! | CTGATTATAGTTTGGCATTT+TGG | + | tig0044957:1538-1557 | Msa1465130:intron | 30.0% |
| CTAGAGTAATGAAGAACATA+TGG | + | tig0044957:1644-1663 | Msa1465130:intron | 30.0% | |
| ATGCGTTCATTATGTTCTAA+AGG | - | tig0044957:1819-1838 | Msa1465130:intergenic | 30.0% | |
| !! | TCACTAAGTCAAAGGTATTA+AGG | + | tig0044957:1916-1935 | Msa1465130:intron | 30.0% |
| GGAAACAAATGAAAAGGAAT+TGG | + | tig0044957:2001-2020 | Msa1465130:CDS | 30.0% | |
| AAATGAAAAGGAATTGGTCA+TGG | + | tig0044957:2007-2026 | Msa1465130:CDS | 30.0% | |
| TGAACAAATCTATAAAGACC+AGG | - | tig0044957:2458-2477 | Msa1465130:intergenic | 30.0% | |
| ! | TGGTCTTTATAGATTTGTTC+AGG | + | tig0044957:2457-2476 | Msa1465130:CDS | 30.0% |
| TCAATTGATCACTAAGAACA+CGG | + | tig0044957:2558-2577 | Msa1465130:intron | 30.0% | |
| AAGTTGCAAACCTTTATCTT+TGG | + | tig0044957:2772-2791 | Msa1465130:CDS | 30.0% | |
| !! | ACGTTGATTCATCAAGAATA+GGG | - | tig0044957:2815-2834 | Msa1465130:intergenic | 30.0% |
| !! | TACGTTGATTCATCAAGAAT+AGG | - | tig0044957:2816-2835 | Msa1465130:intergenic | 30.0% |
| AACCATAAAAGTAACTTCAG+TGG | - | tig0044957:2876-2895 | Msa1465130:intergenic | 30.0% | |
| TTGCGTATAATATTTCTCAG+TGG | + | tig0044957:3010-3029 | Msa1465130:intron | 30.0% | |
| !! | TATCAGTTTTGTGTAATTCC+AGG | - | tig0044957:3045-3064 | Msa1465130:intergenic | 30.0% |
| TAAACATGAGCATTAGCAAT+TGG | + | tig0044957:3197-3216 | Msa1465130:intron | 30.0% | |
| AAACATGAGCATTAGCAATT+GGG | + | tig0044957:3198-3217 | Msa1465130:intron | 30.0% | |
| TTGAATTTCTCATTCCATTG+AGG | - | tig0044957:3417-3436 | Msa1465130:intergenic | 30.0% | |
| GAAATTCAAGATTGTTGTGA+AGG | + | tig0044957:3428-3447 | Msa1465130:CDS | 30.0% | |
| TCCAATTACAAGTCTATGAT+TGG | + | tig0044957:3469-3488 | Msa1465130:CDS | 30.0% | |
| CCAATTACAAGTCTATGATT+GGG | + | tig0044957:3470-3489 | Msa1465130:CDS | 30.0% | |
| ! | AGGTTTTACTTATCTTCTTC+TGG | + | tig0044957:3496-3515 | Msa1465130:intron | 30.0% |
| !! | AAACTTTGGAACCAATTTCA+AGG | + | tig0044957:3824-3843 | Msa1465130:intron | 30.0% |
| GTAAATTCACTCCTTGAAAT+TGG | - | tig0044957:3838-3857 | Msa1465130:intergenic | 30.0% | |
| ACTCCAAATAAGAAGTTTAG+AGG | + | tig0044957:4206-4225 | Msa1465130:CDS | 30.0% | |
| CTCCAAATAAGAAGTTTAGA+GGG | + | tig0044957:4207-4226 | Msa1465130:CDS | 30.0% | |
| TTCATACTATCTTCTCTGAA+TGG | - | tig0044957:4260-4279 | Msa1465130:intergenic | 30.0% | |
| AAATCTATTAGGACTTTAGG+AGG | - | tig0044957:4840-4859 | Msa1465130:intergenic | 30.0% | |
| CAGAAAACACTAGAAGTAAA+CGG | - | tig0044957:4880-4899 | Msa1465130:intergenic | 30.0% | |
| AGTTGAGATAAACTACATGA+GGG | - | tig0044957:5154-5173 | Msa1465130:intergenic | 30.0% | |
| TAGTTGAGATAAACTACATG+AGG | - | tig0044957:5155-5174 | Msa1465130:intergenic | 30.0% | |
| TATCTCAACTAACAAAATGC+AGG | + | tig0044957:5164-5183 | Msa1465130:intron | 30.0% | |
| TCATGTTGAGATAAAATGGA+AGG | + | tig0044957:5284-5303 | Msa1465130:CDS | 30.0% | |
| TAACAAACTAAACCAGTGTA+TGG | + | tig0044957:5312-5331 | Msa1465130:exon | 30.0% | |
| AACAAACTAAACCAGTGTAT+GGG | + | tig0044957:5313-5332 | Msa1465130:exon | 30.0% | |
| GGTACAACAAATAAAGCAAA+AGG | - | tig0044957:5382-5401 | Msa1465130:intergenic | 30.0% | |
| GGAACTAAGAAAATTGTGAG+TGG | - | tig0044957:415-434 | None:intergenic | 35.0% | |
| ATGGTGAATATGGCAAGAAA+TGG | - | tig0044957:436-455 | None:intergenic | 35.0% | |
| ATTGCTCTGTTCACCAAAAA+TGG | + | tig0044957:614-633 | Msa1465130:exon | 35.0% | |
| TTGCTCTGTTCACCAAAAAT+GGG | + | tig0044957:615-634 | Msa1465130:exon | 35.0% | |
| ! | GGGATTCTTTGAAAGTTTCT+TGG | + | tig0044957:635-654 | Msa1465130:CDS | 35.0% |
| ! | GAAAGTTTCTTGGGTGTTTT+TGG | + | tig0044957:645-664 | Msa1465130:CDS | 35.0% |
| !!! | GGTGTTTTTGGTTTTGCTAT+TGG | + | tig0044957:657-676 | Msa1465130:CDS | 35.0% |
| !! | TTTGCTATTGGAATTCCTCT+TGG | + | tig0044957:669-688 | Msa1465130:CDS | 35.0% |
| TTCTGAATCAAAGCAAGTCA+AGG | + | tig0044957:722-741 | Msa1465130:CDS | 35.0% | |
| CCAGAATTCACAACGAAAAA+GGG | - | tig0044957:853-872 | Msa1465130:intergenic | 35.0% | |
| !! | CCTTTTTCGTTGTGAATTCT+GGG | + | tig0044957:851-870 | Msa1465130:intron | 35.0% |
| ! | TCACTAATTGGTCTAACAAC+AGG | - | tig0044957:923-942 | Msa1465130:intergenic | 35.0% |
| TAAGTTCTTGCAAAGCAAGT+GGG | - | tig0044957:952-971 | Msa1465130:intergenic | 35.0% | |
| ATAAGTTCTTGCAAAGCAAG+TGG | - | tig0044957:953-972 | Msa1465130:intergenic | 35.0% | |
| ATTTGATATGTGGCCTTTCT+TGG | + | tig0044957:1127-1146 | Msa1465130:CDS | 35.0% | |
| CTTGATTCAGTGATCATATG+GGG | + | tig0044957:1158-1177 | Msa1465130:intron | 35.0% | |
| ! | TTTTGTGTACAGGCAATTTG+TGG | + | tig0044957:1227-1246 | Msa1465130:intron | 35.0% |
| TTTGTGTACAGGCAATTTGT+GGG | + | tig0044957:1228-1247 | Msa1465130:intron | 35.0% | |
| !! | CATTGGAAAGTATCAGATCA+AGG | + | tig0044957:1289-1308 | Msa1465130:CDS | 35.0% |
| AGATGTCATTGTGTGCATAA+AGG | + | tig0044957:1447-1466 | Msa1465130:intron | 35.0% | |
| GCATAAAGGTAGAATAGTAG+AGG | + | tig0044957:1461-1480 | Msa1465130:intron | 35.0% | |
| ! | TAGAATAGTAGAGGTGCAAT+TGG | + | tig0044957:1470-1489 | Msa1465130:intron | 35.0% |
| ! | AGAATAGTAGAGGTGCAATT+GGG | + | tig0044957:1471-1490 | Msa1465130:intron | 35.0% |
| TACTTATGGCACATACCAAT+GGG | - | tig0044957:1684-1703 | Msa1465130:intergenic | 35.0% | |
| ATACTTATGGCACATACCAA+TGG | - | tig0044957:1685-1704 | Msa1465130:intergenic | 35.0% | |
| GAGTCTACTTTAAACTTCCA+AGG | - | tig0044957:1794-1813 | Msa1465130:intergenic | 35.0% | |
| ! | CTTTGACTTAGTGAACGTAT+AGG | - | tig0044957:1910-1929 | Msa1465130:intergenic | 35.0% |
| CTATACGTTCACTAAGTCAA+AGG | + | tig0044957:1908-1927 | Msa1465130:intron | 35.0% | |
| !! | ACTGTTTGTTGTAATTCTGC+AGG | + | tig0044957:1966-1985 | Msa1465130:intron | 35.0% |
| ! | TTCTGCAGGTATGAAAGTTT+TGG | + | tig0044957:1980-1999 | Msa1465130:intron | 35.0% |
| TCATGGAACAAGTCATCAAA+TGG | + | tig0044957:2024-2043 | Msa1465130:CDS | 35.0% | |
| CATGGAACAAGTCATCAAAT+GGG | + | tig0044957:2025-2044 | Msa1465130:CDS | 35.0% | |
| GCAAGGTCAATACTATGTTT+GGG | - | tig0044957:2058-2077 | Msa1465130:intergenic | 35.0% | |
| TGCAAGGTCAATACTATGTT+TGG | - | tig0044957:2059-2078 | Msa1465130:intergenic | 35.0% | |
| GTCTATGAAGATCAAAGTTC+AGG | + | tig0044957:2085-2104 | Msa1465130:CDS | 35.0% | |
| AAAGGTCTTAAACTTATCCG+CGG | - | tig0044957:2221-2240 | Msa1465130:intergenic | 35.0% | |
| ! | TACACTTCCATGTTTTGCAA+AGG | + | tig0044957:2247-2266 | Msa1465130:CDS | 35.0% |
| AAAGTTGACGTCAACAGAAA+TGG | - | tig0044957:2488-2507 | Msa1465130:intergenic | 35.0% | |
| CAATTGATCACTAAGAACAC+GGG | + | tig0044957:2559-2578 | Msa1465130:intron | 35.0% | |
| ! | ACTAAGAACACGGGAATTTT+AGG | + | tig0044957:2568-2587 | Msa1465130:intron | 35.0% |
| !! | ACACGGGAATTTTAGGAATT+TGG | + | tig0044957:2575-2594 | Msa1465130:intron | 35.0% |
| TAGTTAGTTCATGAAGTGCA+GGG | - | tig0044957:2720-2739 | Msa1465130:intergenic | 35.0% | |
| !!! | TGCCACTGAAGTTACTTTTA+TGG | + | tig0044957:2871-2890 | Msa1465130:intron | 35.0% |
| GACTTATCTAAATAAGGAGC+AGG | - | tig0044957:2957-2976 | Msa1465130:intergenic | 35.0% | |
| TTCACATGTAATATTCCCAC+TGG | - | tig0044957:3267-3286 | Msa1465130:intergenic | 35.0% | |
| GGGAATATTACATGTGAATG+TGG | + | tig0044957:3269-3288 | Msa1465130:CDS | 35.0% | |
| !! | AGCAGTCAAGCTTTTGAAAA+TGG | + | tig0044957:3296-3315 | Msa1465130:CDS | 35.0% |
| ATTGGAGAACTTGAGATTGA+GGG | - | tig0044957:3455-3474 | Msa1465130:intergenic | 35.0% | |
| AATTGGAGAACTTGAGATTG+AGG | - | tig0044957:3456-3475 | Msa1465130:intergenic | 35.0% | |
| CCCAATCATAGACTTGTAAT+TGG | - | tig0044957:3473-3492 | Msa1465130:intergenic | 35.0% | |
| !! | CTTCATTTTGCCTCTGAAAA+TGG | + | tig0044957:3653-3672 | Msa1465130:intron | 35.0% |
| ! | CTTCATTTGACCATTTTCAG+AGG | - | tig0044957:3666-3685 | Msa1465130:intergenic | 35.0% |
| AATGACATTCAAGTCTCAGA+TGG | + | tig0044957:3773-3792 | Msa1465130:intron | 35.0% | |
| CTATGTGCCTCTAGTAAAAA+AGG | - | tig0044957:3860-3879 | Msa1465130:intergenic | 35.0% | |
| !! | TTTTACTAGAGGCACATAGT+TGG | + | tig0044957:3861-3880 | Msa1465130:intron | 35.0% |
| GATGATATGCAATTAAGTGC+AGG | + | tig0044957:4073-4092 | Msa1465130:intron | 35.0% | |
| ATATGCAATTAAGTGCAGGT+TGG | + | tig0044957:4077-4096 | Msa1465130:intron | 35.0% | |
| TGCCCTCTAAACTTCTTATT+TGG | - | tig0044957:4212-4231 | Msa1465130:intergenic | 35.0% | |
| GAAGATAGTATGAAATTCGG+TGG | + | tig0044957:4266-4285 | Msa1465130:CDS | 35.0% | |
| ! | TGATAGTGTATCTGATGATG+AGG | + | tig0044957:4325-4344 | Msa1465130:CDS | 35.0% |
| AGAATTCCAGTTTATGCTAG+AGG | + | tig0044957:4705-4724 | Msa1465130:CDS | 35.0% | |
| ATGTGTATCTTCTCATGTAG+AGG | - | tig0044957:4736-4755 | Msa1465130:intergenic | 35.0% | |
| ! | GAACTTCAGTTTTCTGTCTA+AGG | + | tig0044957:4777-4796 | Msa1465130:CDS | 35.0% |
| TGTTGAGATAAAATGGAAGG+TGG | + | tig0044957:5287-5306 | Msa1465130:CDS | 35.0% | |
| ACAAACTAAACCAGTGTATG+GGG | + | tig0044957:5314-5333 | Msa1465130:exon | 35.0% | |
| ! | TACCTAGCCAACAATGTTTT+TGG | + | tig0044957:5398-5417 | Msa1465130:three_prime_UTR | 35.0% |
| ! | AACCAAAAACATTGTTGGCT+AGG | - | tig0044957:5403-5422 | Msa1465130:intergenic | 35.0% |
| GGTTTAACGTTTGAAGGAAG+AGG | - | tig0044957:582-601 | Msa1465130:intergenic | 40.0% | |
| ! | ATTCCTCTTGGTCTTCTTCT+TGG | + | tig0044957:681-700 | Msa1465130:CDS | 40.0% |
| AAACCAAGAAGAAGACCAAG+AGG | - | tig0044957:687-706 | Msa1465130:intergenic | 40.0% | |
| !! | CCCTTTTTCGTTGTGAATTC+TGG | + | tig0044957:850-869 | Msa1465130:intron | 40.0% |
| CCCAGAATTCACAACGAAAA+AGG | - | tig0044957:854-873 | Msa1465130:intergenic | 40.0% | |
| AGTGGGCCTAATTCACTAAT+TGG | - | tig0044957:935-954 | Msa1465130:intergenic | 40.0% | |
| TTATGCCTGAAATTCCTCTC+TGG | + | tig0044957:969-988 | Msa1465130:CDS | 40.0% | |
| TATGCCTGAAATTCCTCTCT+GGG | + | tig0044957:970-989 | Msa1465130:CDS | 40.0% | |
| !! | GCATGTTTCATCAGGTTGAT+TGG | + | tig0044957:1090-1109 | Msa1465130:intron | 40.0% |
| TCAAGTACCTTCTCCAAGAA+AGG | - | tig0044957:1143-1162 | Msa1465130:intergenic | 40.0% | |
| GAGTTTGATCAATTGAGCCT+TGG | + | tig0044957:1317-1336 | Msa1465130:CDS | 40.0% | |
| TCCCACTATTTGTGGTAAGT+CGG | + | tig0044957:1349-1368 | Msa1465130:intron | 40.0% | |
| ! | ACCGACTTACCACAAATAGT+GGG | - | tig0044957:1353-1372 | Msa1465130:intergenic | 40.0% |
| !! | AATTGGGTTGAGGAGATCAA+TGG | + | tig0044957:1487-1506 | Msa1465130:intron | 40.0% |
| !! | ATTGGGTTGAGGAGATCAAT+GGG | + | tig0044957:1488-1507 | Msa1465130:intron | 40.0% |
| GTTCTGCAATGTAATCCCAT+TGG | + | tig0044957:1666-1685 | Msa1465130:intron | 40.0% | |
| TGCTACGGAGAAGATACTTA+TGG | - | tig0044957:1698-1717 | Msa1465130:intergenic | 40.0% | |
| TGGGTGATTTGAACATGCTA+CGG | - | tig0044957:1713-1732 | Msa1465130:intergenic | 40.0% | |
| CTTCATAGACAACACATGCA+AGG | - | tig0044957:2075-2094 | Msa1465130:intergenic | 40.0% | |
| ! | GCGGATAAGTTTAAGACCTT+TGG | + | tig0044957:2220-2239 | Msa1465130:CDS | 40.0% |
| ! | TCCATGTTTTGCAAAGGTTG+TGG | + | tig0044957:2253-2272 | Msa1465130:CDS | 40.0% |
| ACCACAACCTTTGCAAAACA+TGG | - | tig0044957:2257-2276 | Msa1465130:intergenic | 40.0% | |
| AAAGGTTGTGGTGTCTTTGA+TGG | + | tig0044957:2265-2284 | Msa1465130:CDS | 40.0% | |
| TGTCTTTGATGGAGAAGGTA+AGG | + | tig0044957:2276-2295 | Msa1465130:intron | 40.0% | |
| GTCTTTGATGGAGAAGGTAA+GGG | + | tig0044957:2277-2296 | Msa1465130:intron | 40.0% | |
| ! | TACAGCCTCATGTGGATTTT+GGG | + | tig0044957:2399-2418 | Msa1465130:intron | 40.0% |
| !! | CGGGAATTTTAGGAATTTGG+TGG | + | tig0044957:2578-2597 | Msa1465130:intron | 40.0% |
| AGTTAGTTCATGAAGTGCAG+GGG | - | tig0044957:2719-2738 | Msa1465130:intergenic | 40.0% | |
| GTAGTTAGTTCATGAAGTGC+AGG | - | tig0044957:2721-2740 | Msa1465130:intergenic | 40.0% | |
| ! | AGATCTGAGGCCAAAGATAA+AGG | - | tig0044957:2785-2804 | Msa1465130:intergenic | 40.0% |
| TTATCTTTGGCCTCAGATCT+TGG | + | tig0044957:2785-2804 | Msa1465130:CDS | 40.0% | |
| ATAGGGATTTCCAAGATCTG+AGG | - | tig0044957:2798-2817 | Msa1465130:intergenic | 40.0% | |
| GTAGCAATAAAGAAGCCAGT+GGG | + | tig0044957:3249-3268 | Msa1465130:CDS | 40.0% | |
| !!! | TTGATAGTGGTTTTCTTCGC+TGG | - | tig0044957:3378-3397 | Msa1465130:intergenic | 40.0% |
| CGAAGAAAACCACTATCAAG+AGG | + | tig0044957:3379-3398 | Msa1465130:CDS | 40.0% | |
| AGAAAACCACTATCAAGAGG+AGG | + | tig0044957:3382-3401 | Msa1465130:CDS | 40.0% | |
| CAAATTCCTCCTCTTGATAG+TGG | - | tig0044957:3391-3410 | Msa1465130:intergenic | 40.0% | |
| GGAGGAATTTGAATCCTCAA+TGG | + | tig0044957:3400-3419 | Msa1465130:CDS | 40.0% | |
| ACAAGTCTATGATTGGGACA+AGG | + | tig0044957:3476-3495 | Msa1465130:CDS | 40.0% | |
| ACATTCAAGTCTCAGATGGA+CGG | + | tig0044957:3777-3796 | Msa1465130:intron | 40.0% | |
| GAAGTTTAGAGGGCAAATTG+TGG | + | tig0044957:4217-4236 | Msa1465130:CDS | 40.0% | |
| GTCAGAAGGATATGTCAGAA+AGG | + | tig0044957:4292-4311 | Msa1465130:CDS | 40.0% | |
| GGATATGTCAGAAAGGATAG+TGG | + | tig0044957:4299-4318 | Msa1465130:CDS | 40.0% | |
| TTTGCTTTCAGTTGTGGTAC+AGG | + | tig0044957:4364-4383 | Msa1465130:CDS | 40.0% | |
| CTAAAGGTGATCACTGCAAA+GGG | - | tig0044957:4422-4441 | Msa1465130:intergenic | 40.0% | |
| TCTAAAGGTGATCACTGCAA+AGG | - | tig0044957:4423-4442 | Msa1465130:intergenic | 40.0% | |
| TTTGCAGTGATCACCTTTAG+AGG | + | tig0044957:4422-4441 | Msa1465130:CDS | 40.0% | |
| ! | CCTTTTCTTTTCGCCTCTAA+AGG | - | tig0044957:4438-4457 | Msa1465130:intergenic | 40.0% |
| ! | CCTTTAGAGGCGAAAAGAAA+AGG | + | tig0044957:4435-4454 | Msa1465130:CDS | 40.0% |
| AGGCGAAAAGAAAAGGACAA+AGG | + | tig0044957:4442-4461 | Msa1465130:CDS | 40.0% | |
| TTTCTCCTTCGGTATAGATG+TGG | + | tig0044957:4471-4490 | Msa1465130:intron | 40.0% | |
| TGGAATTCTTCATTCCAACG+TGG | - | tig0044957:4694-4713 | Msa1465130:intergenic | 40.0% | |
| TGTATCTTCTCATGTAGAGG+AGG | - | tig0044957:4733-4752 | Msa1465130:intergenic | 40.0% | |
| ACATGAGAAGATACACATCG+AGG | + | tig0044957:4738-4757 | Msa1465130:CDS | 40.0% | |
| TAACAAAATGCAGGAATCCC+TGG | + | tig0044957:5173-5192 | Msa1465130:intron | 40.0% | |
| AACAAAATGCAGGAATCCCT+GGG | + | tig0044957:5174-5193 | Msa1465130:intron | 40.0% | |
| GGAGATTAATCTGAGTGATG+TGG | + | tig0044957:5203-5222 | Msa1465130:CDS | 40.0% | |
| GATGGTACTTGTCGTTAATG+CGG | - | tig0044957:5239-5258 | Msa1465130:intergenic | 40.0% | |
| CAAACTAAACCAGTGTATGG+GGG | + | tig0044957:5315-5334 | Msa1465130:three_prime_UTR | 40.0% | |
| ACAGTTTCCGACGCAGTTTA+AGG | - | tig0044957:555-574 | Msa1465130:intergenic | 45.0% | |
| TTCACCCAGAGAGGAATTTC+AGG | - | tig0044957:977-996 | Msa1465130:intergenic | 45.0% | |
| TATGTGGCCTTTCTTGGAGA+AGG | + | tig0044957:1133-1152 | Msa1465130:CDS | 45.0% | |
| ACTCTTCCTCCCACTATTTG+TGG | + | tig0044957:1341-1360 | Msa1465130:CDS | 45.0% | |
| ! | GACTTACCACAAATAGTGGG+AGG | - | tig0044957:1350-1369 | Msa1465130:intergenic | 45.0% |
| ! | GACCGACTTACCACAAATAG+TGG | - | tig0044957:1354-1373 | Msa1465130:intergenic | 45.0% |
| GAACAAGTCATCAAATGGGC+TGG | + | tig0044957:2029-2048 | Msa1465130:CDS | 45.0% | |
| ! | TACAAGTTTTTGCGACACCG+CGG | + | tig0044957:2201-2220 | Msa1465130:CDS | 45.0% |
| ! | CATGGAAGTGTAGACACCAA+AGG | - | tig0044957:2239-2258 | Msa1465130:intergenic | 45.0% |
| TGTGGTGTCTTTGATGGAGA+AGG | + | tig0044957:2271-2290 | Msa1465130:CDS | 45.0% | |
| GTTCAATGTACAGCCTCATG+TGG | + | tig0044957:2391-2410 | Msa1465130:intron | 45.0% | |
| ! | GTACAGCCTCATGTGGATTT+TGG | + | tig0044957:2398-2417 | Msa1465130:intron | 45.0% |
| !!! | GATTTTGGGTTGGCGATATC+TGG | + | tig0044957:2413-2432 | Msa1465130:CDS | 45.0% |
| ACTAGGAAACTTCCATTCGC+AGG | - | tig0044957:2511-2530 | Msa1465130:intergenic | 45.0% | |
| TTAGTTCATGAAGTGCAGGG+GGG | - | tig0044957:2717-2736 | Msa1465130:intergenic | 45.0% | |
| GTTAGTTCATGAAGTGCAGG+GGG | - | tig0044957:2718-2737 | Msa1465130:intergenic | 45.0% | |
| TAACTACTTCAGTTGCTCGC+AGG | + | tig0044957:2734-2753 | Msa1465130:intron | 45.0% | |
| TCTCAGTGGCTAACAATTCC+TGG | + | tig0044957:3024-3043 | Msa1465130:intron | 45.0% | |
| GGTAGCAATAAAGAAGCCAG+TGG | + | tig0044957:3248-3267 | Msa1465130:CDS | 45.0% | |
| GTCAGGCTCAGTTTGACATA+TGG | - | tig0044957:3342-3361 | Msa1465130:intergenic | 45.0% | |
| TATGTCAAACTGAGCCTGAC+TGG | + | tig0044957:3342-3361 | Msa1465130:CDS | 45.0% | |
| ATGTCAAACTGAGCCTGACT+GGG | + | tig0044957:3343-3362 | Msa1465130:CDS | 45.0% | |
| ! | AGGCAGAGTGTTTGGTCAAT+AGG | - | tig0044957:3576-3595 | Msa1465130:intergenic | 45.0% |
| ! | TGCTTTCAAGGCAGAGTGTT+TGG | - | tig0044957:3584-3603 | Msa1465130:intergenic | 45.0% |
| GCTGACACTAGATGCTTTCA+AGG | - | tig0044957:3596-3615 | Msa1465130:intergenic | 45.0% | |
| !! | ACGGCTTAAGCAGCTTTAGA+GGG | - | tig0044957:4133-4152 | Msa1465130:intergenic | 45.0% |
| ! | TACGGCTTAAGCAGCTTTAG+AGG | - | tig0044957:4134-4153 | Msa1465130:intergenic | 45.0% |
| GTTTAGAGGGCAAATTGTGG+TGG | + | tig0044957:4220-4239 | Msa1465130:CDS | 45.0% | |
| ! | AAATTCGGTGGATCGTCAGA+AGG | + | tig0044957:4278-4297 | Msa1465130:CDS | 45.0% |
| ! | TCTGATGATGAGGTCCAAGA+AGG | + | tig0044957:4335-4354 | Msa1465130:CDS | 45.0% |
| TTGAGCCACATCTATACCGA+AGG | - | tig0044957:4479-4498 | Msa1465130:intergenic | 45.0% | |
| TTCATTCCAACGTGGTTGAC+GGG | - | tig0044957:4686-4705 | Msa1465130:intergenic | 45.0% | |
| CTTCATTCCAACGTGGTTGA+CGG | - | tig0044957:4687-4706 | Msa1465130:intergenic | 45.0% | |
| ACAAAATGCAGGAATCCCTG+GGG | + | tig0044957:5175-5194 | Msa1465130:intron | 45.0% | |
| ATTAATCTCCACATGCCCCA+GGG | - | tig0044957:5193-5212 | Msa1465130:intergenic | 45.0% | |
| CTGAGTGATGTGGTGCATAA+TGG | + | tig0044957:5213-5232 | Msa1465130:CDS | 45.0% | |
| GTTTCCGACGCAGTTTAAGG+TGG | - | tig0044957:552-571 | Msa1465130:intergenic | 50.0% | |
| !! | TAGTGGGAGGAAGAGTACCA+AGG | - | tig0044957:1337-1356 | Msa1465130:intergenic | 50.0% |
| ! | GTAGAGGTGCAATTGGGTTG+AGG | + | tig0044957:1477-1496 | Msa1465130:intron | 50.0% |
| GGTTGAGGAGATCAATGGGA+AGG | + | tig0044957:1492-1511 | Msa1465130:intron | 50.0% | |
| !! | GCCTCATGTGGATTTTGGGT+TGG | + | tig0044957:2403-2422 | Msa1465130:intron | 50.0% |
| GCCAACCCAAAATCCACATG+AGG | - | tig0044957:2407-2426 | Msa1465130:intergenic | 50.0% | |
| !! | TTTGGGTTGGCGATATCTGG+AGG | + | tig0044957:2416-2435 | Msa1465130:CDS | 50.0% |
| !! | TTGGGTTGGCGATATCTGGA+GGG | + | tig0044957:2417-2436 | Msa1465130:CDS | 50.0% |
| GGGGACATCATGTCAATACC+TGG | + | tig0044957:2437-2456 | Msa1465130:CDS | 50.0% | |
| GACGTCAACTTTCCTGCGAA+TGG | + | tig0044957:2496-2515 | Msa1465130:intron | 50.0% | |
| TGTCAAACTGAGCCTGACTG+GGG | + | tig0044957:3344-3363 | Msa1465130:CDS | 50.0% | |
| GTTGGTGCACATGACAAGCT+GGG | + | tig0044957:4095-4114 | Msa1465130:CDS | 50.0% | |
| TGATGAGGTCCAAGAAGGAG+CGG | + | tig0044957:4340-4359 | Msa1465130:CDS | 50.0% | |
| AAAGCAAACCCGCTCCTTCT+TGG | - | tig0044957:4352-4371 | Msa1465130:intergenic | 50.0% | |
| ! | AGCGGGTTTGCTTTCAGTTG+TGG | + | tig0044957:4358-4377 | Msa1465130:CDS | 50.0% |
| GCTTTCAGTTGTGGTACAGG+AGG | + | tig0044957:4367-4386 | Msa1465130:CDS | 50.0% | |
| AGAAAACCCGTCAACCACGT+TGG | + | tig0044957:4677-4696 | Msa1465130:CDS | 50.0% | |
| GAGGCTCCTCTAGCATAAAC+TGG | - | tig0044957:4714-4733 | Msa1465130:intergenic | 50.0% | |
| ACATCGAGGTCATGAGCAAG+AGG | + | tig0044957:4752-4771 | Msa1465130:CDS | 50.0% | |
| GATTAATCTCCACATGCCCC+AGG | - | tig0044957:5194-5213 | Msa1465130:intergenic | 50.0% | |
| ! | TGAGTTTTGCCCCCATACAC+TGG | - | tig0044957:5327-5346 | Msa1465130:intergenic | 50.0% |
| CTCGCCACCTTAAACTGCGT+CGG | + | tig0044957:545-564 | Msa1465130:five_prime_UTR | 55.0% | |
| TCAGGTGTCTTCACCCAGAG+AGG | - | tig0044957:986-1005 | Msa1465130:intergenic | 55.0% | |
| !! | TGGGTTGGCGATATCTGGAG+GGG | + | tig0044957:2418-2437 | Msa1465130:CDS | 55.0% |
| CTGGAAGTTTGTCCCCAGTC+AGG | - | tig0044957:3359-3378 | Msa1465130:intergenic | 55.0% | |
| ! | GGTTGGTGCACATGACAAGC+TGG | + | tig0044957:4094-4113 | Msa1465130:intron | 55.0% |
| GATGAGGTCCAAGAAGGAGC+GGG | + | tig0044957:4341-4360 | Msa1465130:CDS | 55.0% | |
| ACAGGAGGCTGACGAAGTTG+AGG | + | tig0044957:4382-4401 | Msa1465130:CDS | 55.0% | |
| CAGGAGGCTGACGAAGTTGA+GGG | + | tig0044957:4383-4402 | Msa1465130:CDS | 55.0% | |
| GCAGGAATCCCTGGGGCATG+TGG | + | tig0044957:5182-5201 | Msa1465130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0044957 | gene | 401 | 5504 | 401 | ID=Msa1465130;Name=Msa1465130 |
| tig0044957 | mRNA | 401 | 5504 | 401 | ID=Msa1465130-mRNA-1;Parent=Msa1465130;Name=Msa1465130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=232|1|1|1|1|1|12|190|544 |
| tig0044957 | exon | 401 | 743 | 401 | ID=Msa1465130-mRNA-1:exon:24688;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 917 | 1015 | 917 | ID=Msa1465130-mRNA-1:exon:24689;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 1104 | 1154 | 1104 | ID=Msa1465130-mRNA-1:exon:24690;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 1239 | 1362 | 1239 | ID=Msa1465130-mRNA-1:exon:24691;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 1988 | 2106 | 1988 | ID=Msa1465130-mRNA-1:exon:24692;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 2191 | 2292 | 2191 | ID=Msa1465130-mRNA-1:exon:24693;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 2404 | 2478 | 2404 | ID=Msa1465130-mRNA-1:exon:24694;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 2756 | 2832 | 2756 | ID=Msa1465130-mRNA-1:exon:24695;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 3248 | 3497 | 3248 | ID=Msa1465130-mRNA-1:exon:24696;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 4095 | 4463 | 4095 | ID=Msa1465130-mRNA-1:exon:24697;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 4670 | 4798 | 4670 | ID=Msa1465130-mRNA-1:exon:24698;Parent=Msa1465130-mRNA-1 |
| tig0044957 | exon | 5186 | 5504 | 5186 | ID=Msa1465130-mRNA-1:exon:24699;Parent=Msa1465130-mRNA-1 |
| tig0044957 | five_prime_UTR | 401 | 632 | 401 | ID=Msa1465130-mRNA-1:five_prime_utr;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 633 | 743 | 633 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 917 | 1015 | 917 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 1104 | 1154 | 1104 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 1239 | 1362 | 1239 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 1988 | 2106 | 1988 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 2191 | 2292 | 2191 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 2404 | 2478 | 2404 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 2756 | 2832 | 2756 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 3248 | 3497 | 3248 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 4095 | 4463 | 4095 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 4670 | 4798 | 4670 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | CDS | 5186 | 5314 | 5186 | ID=Msa1465130-mRNA-1:cds;Parent=Msa1465130-mRNA-1 |
| tig0044957 | three_prime_UTR | 5315 | 5504 | 5315 | ID=Msa1465130-mRNA-1:three_prime_utr;Parent=Msa1465130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
