Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000509.t1 | KEH33680.1 | 91.4 | 443 | 33 | 4 | 1 | 442 | 1 | 439 | 2.70E-227 | 797.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000509.t1 | F4IDQ5 | 38.3 | 488 | 218 | 17 | 1 | 441 | 29 | 480 | 2.4e-59 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000509.t1 | A0A072V681 | 91.4 | 443 | 33 | 4 | 1 | 442 | 1 | 439 | 1.9e-227 | 797.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000509 | MS.gene47715 | PPI |
| MS.gene000509 | MS.gene017059 | PPI |
| MS.gene000509 | MS.gene22197 | PPI |
| MS.gene000509 | MS.gene019180 | PPI |
| MS.gene017059 | MS.gene000509 | PPI |
| MS.gene000509 | MS.gene69498 | PPI |
| MS.gene000509 | MS.gene038276 | PPI |
| MS.gene000509 | MS.gene48029 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000509.t1 | MTR_3g450760 | 94.131 | 443 | 21 | 5 | 1 | 442 | 1 | 439 | 0.0 | 843 |
| MS.gene000509.t1 | MTR_5g090900 | 45.690 | 464 | 196 | 10 | 1 | 422 | 24 | 473 | 1.10e-115 | 347 |
| MS.gene000509.t1 | MTR_1g069610 | 39.683 | 126 | 62 | 4 | 284 | 401 | 317 | 436 | 4.95e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000509.t1 | AT1G06660 | 38.683 | 486 | 219 | 17 | 1 | 441 | 29 | 480 | 1.19e-72 | 236 |
| MS.gene000509.t1 | AT2G30820 | 35.974 | 467 | 215 | 14 | 1 | 433 | 1 | 417 | 1.40e-60 | 203 |
| MS.gene000509.t1 | AT2G30820 | 35.974 | 467 | 215 | 14 | 1 | 433 | 1 | 417 | 1.40e-60 | 203 |
Find 124 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCACCTAGGCTGTTATT+TGG | 0.189762 | 3.2:-38207490 | None:intergenic |
| GTCCTCCAAAGTTTCGTTCT+TGG | 0.196344 | 3.2:+38206690 | MS.gene000509:CDS |
| GAAGCCTGCATCTGTTATTT+TGG | 0.212458 | 3.2:+38207663 | MS.gene000509:CDS |
| CGGCACGGCGGCGGAGGCAG+CGG | 0.226596 | 3.2:-38203820 | None:intergenic |
| TAGCATGCCAGCTCACTTTC+TGG | 0.229927 | 3.2:-38207949 | None:intergenic |
| TTGTATTTGTTGGTTGAATT+TGG | 0.246872 | 3.2:-38207835 | None:intergenic |
| TGGAAGAAGGCTTGTCTTCT+TGG | 0.254792 | 3.2:+38207638 | MS.gene000509:CDS |
| CGATGGGACTGAAATGAATA+AGG | 0.261654 | 3.2:+38207291 | MS.gene000509:CDS |
| GGAGGAGAGAAGAAAGAAAA+TGG | 0.286742 | 3.2:+38207684 | MS.gene000509:CDS |
| ATCTTCATTGGGGTAGGATT+TGG | 0.293500 | 3.2:-38207409 | None:intergenic |
| TCCTGTGAGTCATCGGCTTA+TGG | 0.325210 | 3.2:+38207358 | MS.gene000509:CDS |
| TCATACTTCTTTGTATTTGT+TGG | 0.327303 | 3.2:-38207845 | None:intergenic |
| TACACAAACTGGGACTTAAC+AGG | 0.339806 | 3.2:-38207466 | None:intergenic |
| ATCCCTTCAGATATCTTCAT+TGG | 0.349727 | 3.2:-38207421 | None:intergenic |
| CCTTCATGTAGTAACGATTC+TGG | 0.376618 | 3.2:+38206668 | MS.gene000509:CDS |
| TTGAATGGTTGGACATTAGT+TGG | 0.377570 | 3.2:-38206740 | None:intergenic |
| TGTTATTTGGATACACAAAC+TGG | 0.390899 | 3.2:-38207477 | None:intergenic |
| CCTCCGCCGCCGTGCCGTCT+CGG | 0.397513 | 3.2:+38203826 | MS.gene000509:CDS |
| CCGAGACGGCACGGCGGCGG+AGG | 0.397598 | 3.2:-38203826 | None:intergenic |
| TCCCTTCAGATATCTTCATT+GGG | 0.406133 | 3.2:-38207420 | None:intergenic |
| CACGGCGGCGGAGGCAGCGG+CGG | 0.410655 | 3.2:-38203817 | None:intergenic |
| TCATTCTCATCAAAAGCAAT+TGG | 0.422122 | 3.2:-38208443 | None:intergenic |
| TTGGGAGTTGGCGGATTGAA+TGG | 0.422674 | 3.2:-38206755 | None:intergenic |
| CAAGTACCCCTACTGAAATT+CGG | 0.424717 | 3.2:+38206618 | MS.gene000509:CDS |
| TGCAGCAACCATCCCAATGA+TGG | 0.431713 | 3.2:-38207749 | None:intergenic |
| AAGACAATGTGCATCGTAAT+GGG | 0.432569 | 3.2:+38205515 | MS.gene000509:CDS |
| ATGTTCCTGCGCAAGATTCA+AGG | 0.435844 | 3.2:+38207548 | MS.gene000509:CDS |
| AGGGATCACAGAGTGATGAT+AGG | 0.453830 | 3.2:+38205551 | MS.gene000509:CDS |
| CCTGTCGATAGGCCCATCAT+TGG | 0.456758 | 3.2:+38207736 | MS.gene000509:CDS |
| GTGCCGAGACGGCACGGCGG+CGG | 0.460806 | 3.2:-38203829 | None:intergenic |
| TTAACAGGGTAAACAGTTCC+AGG | 0.469267 | 3.2:-38207451 | None:intergenic |
| GAGCAAGATACTTGAGGAAG+AGG | 0.471401 | 3.2:+38207522 | MS.gene000509:CDS |
| GAAGACAATGTGCATCGTAA+TGG | 0.477516 | 3.2:+38205514 | MS.gene000509:CDS |
| AGAAGCCAAGAACGAAACTT+TGG | 0.484007 | 3.2:-38206695 | None:intergenic |
| TCCTCCAAAATAACAGATGC+AGG | 0.487575 | 3.2:-38207667 | None:intergenic |
| GATGGGACTGAAATGAATAA+GGG | 0.488622 | 3.2:+38207292 | MS.gene000509:CDS |
| ACGACGCCACGGACTGTGGA+TGG | 0.492778 | 3.2:-38208505 | None:intergenic |
| ATGGGAATATCATGACTCTT+CGG | 0.494202 | 3.2:+38207237 | MS.gene000509:CDS |
| CCAATGCACACAATACTCAA+TGG | 0.495131 | 3.2:+38207218 | MS.gene000509:CDS |
| GCAAAGTTTCTTAAAGCTTG+TGG | 0.503956 | 3.2:+38206587 | MS.gene000509:CDS |
| ATCTTCCTTGAATCTTGCGC+AGG | 0.504663 | 3.2:-38207553 | None:intergenic |
| CAATGCACACAATACTCAAT+GGG | 0.505196 | 3.2:+38207219 | MS.gene000509:CDS |
| TTCAGTAGGGGTACTTGCTA+TGG | 0.505440 | 3.2:-38206612 | None:intergenic |
| CTCTTCGGAAGGAAGTGGGC+AGG | 0.505993 | 3.2:+38207252 | MS.gene000509:CDS |
| CCAATGATGGGCCTATCGAC+AGG | 0.508176 | 3.2:-38207736 | None:intergenic |
| CCATTGAGTATTGTGTGCAT+TGG | 0.512181 | 3.2:-38207218 | None:intergenic |
| CTTCGGAAGGAAGTGGGCAG+GGG | 0.512249 | 3.2:+38207254 | MS.gene000509:CDS |
| TGCTCCTCCTCCTAAGTGGT+GGG | 0.512880 | 3.2:+38207798 | MS.gene000509:CDS |
| CATGACTCTTCGGAAGGAAG+TGG | 0.514139 | 3.2:+38207247 | MS.gene000509:CDS |
| GATGCTTTCCGAATTTCAGT+AGG | 0.514555 | 3.2:-38206626 | None:intergenic |
| CTGTCGATAGGCCCATCATT+GGG | 0.516223 | 3.2:+38207737 | MS.gene000509:CDS |
| CAACACGACGCCACGGACTG+TGG | 0.521235 | 3.2:-38208509 | None:intergenic |
| TCTTCGGAAGGAAGTGGGCA+GGG | 0.526061 | 3.2:+38207253 | MS.gene000509:CDS |
| TATTTCATCCTGTGAGTCAT+CGG | 0.528657 | 3.2:+38207351 | MS.gene000509:CDS |
| ATGCTCCTCCTCCTAAGTGG+TGG | 0.530708 | 3.2:+38207797 | MS.gene000509:CDS |
| GAGAAGAAAGAAAATGGAGA+TGG | 0.532138 | 3.2:+38207690 | MS.gene000509:CDS |
| TTAAAGATTAATAACCTGCT+AGG | 0.536769 | 3.2:-38206827 | None:intergenic |
| AGTGAATCTACCGTGGAAGA+AGG | 0.537717 | 3.2:+38207625 | MS.gene000509:CDS |
| TCTACTTTGTTTCTGACCGA+AGG | 0.540444 | 3.2:+38205378 | MS.gene000509:CDS |
| GTTCACAGGAAAGATATTTG+CGG | 0.540461 | 3.2:+38208416 | MS.gene000509:intron |
| CTTATTCATTTCAGTCCCAT+CGG | 0.540593 | 3.2:-38207290 | None:intergenic |
| GAGTTGGCGGATTGAATGGT+TGG | 0.541865 | 3.2:-38206751 | None:intergenic |
| GTTCAGACCACACACCTAGC+AGG | 0.546465 | 3.2:+38206813 | MS.gene000509:CDS |
| TCAGATATCTTCATTGGGGT+AGG | 0.551648 | 3.2:-38207415 | None:intergenic |
| TTCATTTCAGTCCCATCGGT+CGG | 0.552448 | 3.2:-38207286 | None:intergenic |
| ATGCTTTCCGAATTTCAGTA+GGG | 0.554306 | 3.2:-38206625 | None:intergenic |
| GGGAGCTATCATCCGACCGA+TGG | 0.556557 | 3.2:+38207274 | MS.gene000509:CDS |
| ACATTACATTGGCTTTGTTG+TGG | 0.556918 | 3.2:-38203851 | None:intergenic |
| GAACACGAAAGCAAGTGAAA+AGG | 0.559259 | 3.2:-38203767 | None:intergenic |
| TTCAGGACCAGAAAGTGAGC+TGG | 0.559748 | 3.2:+38207942 | MS.gene000509:intron |
| ACCATAAGCCGATGACTCAC+AGG | 0.559884 | 3.2:-38207359 | None:intergenic |
| CCTCCTCCTAAGTGGTGGGA+TGG | 0.560739 | 3.2:+38207802 | MS.gene000509:CDS |
| CCATTGCCATCCCACCACTT+AGG | 0.560739 | 3.2:-38207808 | None:intergenic |
| TCTGAAGGGATGCAAACTCC+TGG | 0.562862 | 3.2:+38207433 | MS.gene000509:CDS |
| GTTGTGGTGCCGAGACGGCA+CGG | 0.566404 | 3.2:-38203835 | None:intergenic |
| TCAGAAACAAAGTAGACAAA+CGG | 0.567517 | 3.2:-38205371 | None:intergenic |
| CGACGCCACGGACTGTGGAT+GGG | 0.567931 | 3.2:-38208504 | None:intergenic |
| CCTAAGTGGTGGGATGGCAA+TGG | 0.569676 | 3.2:+38207808 | MS.gene000509:CDS |
| GTGTATCCAAATAACAGCCT+AGG | 0.571499 | 3.2:+38207484 | MS.gene000509:CDS |
| ATGCTACGCCGTTCGAAGAG+AGG | 0.575521 | 3.2:+38207966 | MS.gene000509:CDS |
| ACCCCAATGAAGATATCTGA+AGG | 0.577653 | 3.2:+38207418 | MS.gene000509:CDS |
| CCATCCCACCACTTAGGAGG+AGG | 0.578549 | 3.2:-38207802 | None:intergenic |
| AGTATCACATTCAAAACGTA+CGG | 0.579270 | 3.2:-38207326 | None:intergenic |
| TTGGGATGGTTGCTGCACAT+TGG | 0.584288 | 3.2:+38207755 | MS.gene000509:CDS |
| GGAGCTATCATCCGACCGAT+GGG | 0.587580 | 3.2:+38207275 | MS.gene000509:CDS |
| GTTCGAAGAGAGGTTGGAGA+AGG | 0.592220 | 3.2:+38207976 | MS.gene000509:CDS |
| CGATAGGCCCATCATTGGGA+TGG | 0.592976 | 3.2:+38207741 | MS.gene000509:CDS |
| AGCCAAGAACGAAACTTTGG+AGG | 0.594708 | 3.2:-38206692 | None:intergenic |
| TAGATATCAACACGACGCCA+CGG | 0.596729 | 3.2:-38208516 | None:intergenic |
| TACTGAAATTCGGAAAGCAT+CGG | 0.598546 | 3.2:+38206628 | MS.gene000509:CDS |
| TTCTCCAACCTCTCTTCGAA+CGG | 0.599277 | 3.2:-38207974 | None:intergenic |
| AGTCATCGGCTTATGGTGGA+TGG | 0.599998 | 3.2:+38207365 | MS.gene000509:CDS |
| GCAGCAACCATCCCAATGAT+GGG | 0.601660 | 3.2:-38207748 | None:intergenic |
| CTGATGCTCCTCCTCCTAAG+TGG | 0.601801 | 3.2:+38207794 | MS.gene000509:CDS |
| TCCAAATAACAGCCTAGGTG+AGG | 0.601979 | 3.2:+38207489 | MS.gene000509:CDS |
| CTCTAAGAGCAAGATACTTG+AGG | 0.603618 | 3.2:+38207516 | MS.gene000509:CDS |
| AGGCAGCGGCGGATTTAGCG+TGG | 0.604654 | 3.2:-38203806 | None:intergenic |
| TTGCCATCCCACCACTTAGG+AGG | 0.606952 | 3.2:-38207805 | None:intergenic |
| TACGCCGTTCGAAGAGAGGT+TGG | 0.606989 | 3.2:+38207970 | MS.gene000509:CDS |
| GCTTTGTTGTGGTGCCGAGA+CGG | 0.608775 | 3.2:-38203840 | None:intergenic |
| CCCTTCAGATATCTTCATTG+GGG | 0.615934 | 3.2:-38207419 | None:intergenic |
| CCAGAATCGTTACTACATGA+AGG | 0.617304 | 3.2:-38206668 | None:intergenic |
| ATGACTCTTCGGAAGGAAGT+GGG | 0.617710 | 3.2:+38207248 | MS.gene000509:CDS |
| TGCTTTCCGAATTTCAGTAG+GGG | 0.618402 | 3.2:-38206624 | None:intergenic |
| CCCGCAAAACTCCTGTCGAT+AGG | 0.624406 | 3.2:+38207725 | MS.gene000509:CDS |
| AGAAGACAAGCCTTCTTCCA+CGG | 0.626278 | 3.2:-38207635 | None:intergenic |
| TTCATCCCATCCACAGTCCG+TGG | 0.627583 | 3.2:+38208499 | MS.gene000509:CDS |
| CCCCAATGAAGATATCTGAA+GGG | 0.632021 | 3.2:+38207419 | MS.gene000509:CDS |
| GAATATCATGACTCTTCGGA+AGG | 0.632054 | 3.2:+38207241 | MS.gene000509:CDS |
| CTTTGTAAAGCAGGATGATG+TGG | 0.633113 | 3.2:+38205338 | MS.gene000509:intron |
| TGCTGCACATTGGATTGAAG+AGG | 0.634738 | 3.2:+38207765 | MS.gene000509:CDS |
| AGGATATTATCATCGCTCAA+AGG | 0.635364 | 3.2:+38208008 | MS.gene000509:CDS |
| ACACAAACTGGGACTTAACA+GGG | 0.635382 | 3.2:-38207465 | None:intergenic |
| CAGCGGCGGATTTAGCGTGG+TGG | 0.635935 | 3.2:-38203803 | None:intergenic |
| TGTGAGTCATCGGCTTATGG+TGG | 0.636034 | 3.2:+38207361 | MS.gene000509:CDS |
| TTAATAACCTGCTAGGTGTG+TGG | 0.641765 | 3.2:-38206820 | None:intergenic |
| GTTGGAGAAGGCATTATCTG+AGG | 0.647231 | 3.2:+38207988 | MS.gene000509:CDS |
| ATGGGACTGAAATGAATAAG+GGG | 0.654668 | 3.2:+38207293 | MS.gene000509:CDS |
| GTTATTTGGATACACAAACT+GGG | 0.662575 | 3.2:-38207476 | None:intergenic |
| AGATAAAAGTGAATCTACCG+TGG | 0.669633 | 3.2:+38207618 | MS.gene000509:CDS |
| TCTTAGAGACATCCTCACCT+AGG | 0.675023 | 3.2:-38207501 | None:intergenic |
| TGATAGGCAGCTTAAAGACG+AGG | 0.694138 | 3.2:+38205567 | MS.gene000509:CDS |
| GGACTGAAATGAATAAGGGG+AGG | 0.697836 | 3.2:+38207296 | MS.gene000509:CDS |
| GTGGTGCCGAGACGGCACGG+CGG | 0.818841 | 3.2:-38203832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGTTAAATAGGAA+TGG | + | chr3.2:38204142-38204161 | MS.gene000509:intron | 15.0% |
| !! | AAAAATTGTTAAATAGGAAT+GGG | + | chr3.2:38204143-38204162 | MS.gene000509:intron | 15.0% |
| !! | AAACTTAATTCAATAATCAT+AGG | - | chr3.2:38203999-38204018 | None:intergenic | 15.0% |
| !! | TACAAAAAATAAACAAGAAA+CGG | - | chr3.2:38203896-38203915 | None:intergenic | 15.0% |
| !! | TGAAAAGGTTATATTTAATA+TGG | - | chr3.2:38207162-38207181 | None:intergenic | 15.0% |
| !! | TTCAAAAAAAAAATTTAAGC+TGG | + | chr3.2:38204405-38204424 | MS.gene000509:intron | 15.0% |
| !!! | AAAGTATTTAATAGTTTTCA+TGG | + | chr3.2:38205141-38205160 | MS.gene000509:intron | 15.0% |
| !!! | AAGTATTTAATAGTTTTCAT+GGG | + | chr3.2:38205142-38205161 | MS.gene000509:intron | 15.0% |
| !!! | ATTTACTGAAATTTTAGTTT+TGG | + | chr3.2:38204740-38204759 | MS.gene000509:intron | 15.0% |
| !!! | ATTTTAGGTTTTTTTTTTGT+TGG | + | chr3.2:38204498-38204517 | MS.gene000509:intron | 15.0% |
| !!! | GATTAATTTTATCGATTTAA+AGG | + | chr3.2:38204241-38204260 | MS.gene000509:intron | 15.0% |
| !!! | TAGTGTTTGAAATTTTATTT+AGG | + | chr3.2:38204977-38204996 | MS.gene000509:intron | 15.0% |
| !!! | TTAACCTTTTTTTTTTTGAA+AGG | + | chr3.2:38206846-38206865 | MS.gene000509:intron | 15.0% |
| !!! | TTTTTTTTTTTTTCCTGTTT+GGG | + | chr3.2:38204438-38204457 | MS.gene000509:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTCCTGTT+TGG | + | chr3.2:38204437-38204456 | MS.gene000509:intron | 15.0% |
| !! | AAAAAAATTTAAGCTGGATT+TGG | + | chr3.2:38204411-38204430 | MS.gene000509:intron | 20.0% |
| !! | AATAGACAAATGACTTAAAA+AGG | - | chr3.2:38206499-38206518 | None:intergenic | 20.0% |
| !! | ATTGCCTTTCAAAAAAAAAA+AGG | - | chr3.2:38206853-38206872 | None:intergenic | 20.0% |
| !! | TAGCAAAATAAATTTACCTT+CGG | - | chr3.2:38205397-38205416 | None:intergenic | 20.0% |
| !! | TGTGGAAAAAATTGTTAAAT+AGG | + | chr3.2:38204137-38204156 | MS.gene000509:intron | 20.0% |
| !!! | AAAATTGGTGTTTTAGAAAA+TGG | + | chr3.2:38207051-38207070 | MS.gene000509:intron | 20.0% |
| !!! | AAAGAAATTAACTTCTGAAA+AGG | - | chr3.2:38207177-38207196 | None:intergenic | 20.0% |
| !!! | AAATGTTAGTTTAATTAAGC+TGG | + | chr3.2:38204186-38204205 | MS.gene000509:intron | 20.0% |
| !!! | AATATCGTTTTAACTTTCAA+AGG | - | chr3.2:38208077-38208096 | None:intergenic | 20.0% |
| !!! | GAAATTTGTTTATGAAATGA+TGG | + | chr3.2:38204523-38204542 | MS.gene000509:intron | 20.0% |
| !!! | GTTTTTGATTTTTTGTGTTT+AGG | + | chr3.2:38204675-38204694 | MS.gene000509:intron | 20.0% |
| !!! | TAGCTTTGTTATTGATTTAA+TGG | + | chr3.2:38204895-38204914 | MS.gene000509:intron | 20.0% |
| !!! | TAGGTTTGTTATTGATTTAA+AGG | + | chr3.2:38204694-38204713 | MS.gene000509:intron | 20.0% |
| !!! | TCTCTTTACTTTTTTAATGA+AGG | + | chr3.2:38206159-38206178 | MS.gene000509:intron | 20.0% |
| !!! | TGTTATTGATTTAAAGGATT+AGG | + | chr3.2:38204700-38204719 | MS.gene000509:intron | 20.0% |
| !!! | TTAAGTTTGTTTACATGATT+TGG | + | chr3.2:38206550-38206569 | MS.gene000509:intron | 20.0% |
| !!! | TTCCCTTTTAGATTTTTTAA+GGG | + | chr3.2:38207094-38207113 | MS.gene000509:intron | 20.0% |
| !!! | TTTAGATAATTGAGTTTTTG+AGG | - | chr3.2:38206317-38206336 | None:intergenic | 20.0% |
| !!! | TTTCCCTTTTAGATTTTTTA+AGG | + | chr3.2:38207093-38207112 | MS.gene000509:intron | 20.0% |
| !!! | TTTTTTGAAGAACCTAAATT+CGG | - | chr3.2:38204394-38204413 | None:intergenic | 20.0% |
| ! | AATGTTACCGTTTATGTTTA+TGG | + | chr3.2:38205931-38205950 | MS.gene000509:intron | 25.0% |
| ! | ATGATGAATTTGTAGATTTC+AGG | + | chr3.2:38204833-38204852 | MS.gene000509:intron | 25.0% |
| ! | ATGCCCTTAAAAAATCTAAA+AGG | - | chr3.2:38207100-38207119 | None:intergenic | 25.0% |
| ! | CAAAAAACAATGTGAAGAAT+GGG | + | chr3.2:38206775-38206794 | MS.gene000509:CDS | 25.0% |
| ! | GAAAACAATCAGCATTAATT+AGG | - | chr3.2:38207925-38207944 | None:intergenic | 25.0% |
| ! | GAAAGATAAAAAATAGCTTC+AGG | - | chr3.2:38205835-38205854 | None:intergenic | 25.0% |
| ! | GACATACTATATAGATATAC+AGG | - | chr3.2:38206241-38206260 | None:intergenic | 25.0% |
| ! | GATTATGAGTTACATTACAT+TGG | - | chr3.2:38203865-38203884 | None:intergenic | 25.0% |
| ! | GTTGAAATGATAGCTTAATT+CGG | + | chr3.2:38204603-38204622 | MS.gene000509:intron | 25.0% |
| ! | TAATGAAGGTAGAAATTATC+TGG | + | chr3.2:38206173-38206192 | MS.gene000509:intron | 25.0% |
| ! | TCATACTTCTTTGTATTTGT+TGG | - | chr3.2:38207848-38207867 | None:intergenic | 25.0% |
| ! | TGCCCTTAAAAAATCTAAAA+GGG | - | chr3.2:38207099-38207118 | None:intergenic | 25.0% |
| ! | TGGTAAATTGCTTATGTATA+TGG | - | chr3.2:38208245-38208264 | None:intergenic | 25.0% |
| ! | TTAAAGATTAATAACCTGCT+AGG | - | chr3.2:38206830-38206849 | None:intergenic | 25.0% |
| ! | TTACAGATAAATGCACAATT+TGG | + | chr3.2:38206111-38206130 | MS.gene000509:intron | 25.0% |
| !! | AATTCCAAGAATTTTTGTTG+TGG | + | chr3.2:38204119-38204138 | MS.gene000509:intron | 25.0% |
| !! | AGTTTAATTAAGCTGGATTT+TGG | + | chr3.2:38204300-38204319 | MS.gene000509:intron | 25.0% |
| !! | CTCAGTAATGTACTAATTTT+GGG | + | chr3.2:38205469-38205488 | MS.gene000509:intron | 25.0% |
| !! | GTTTAATTAAGCTGGATTTT+GGG | + | chr3.2:38204301-38204320 | MS.gene000509:intron | 25.0% |
| !! | TCAGTAATGTACTAATTTTG+GGG | + | chr3.2:38205470-38205489 | MS.gene000509:intron | 25.0% |
| !! | TCTCAGTAATGTACTAATTT+TGG | + | chr3.2:38205468-38205487 | MS.gene000509:intron | 25.0% |
| !! | TGCTTTAACTTAGTTAATGT+AGG | + | chr3.2:38205992-38206011 | MS.gene000509:intron | 25.0% |
| !! | TTGTATTTGTTGGTTGAATT+TGG | - | chr3.2:38207838-38207857 | None:intergenic | 25.0% |
| !! | TTTTCCACAACAAAAATTCT+TGG | - | chr3.2:38204126-38204145 | None:intergenic | 25.0% |
| !!! | AATGGATTATGAAATGATGA+AGG | + | chr3.2:38204913-38204932 | MS.gene000509:intron | 25.0% |
| !!! | AATTAATGCTGATTGTTTTC+AGG | + | chr3.2:38207925-38207944 | MS.gene000509:intron | 25.0% |
| !!! | CATTCTTCACATTGTTTTTT+GGG | - | chr3.2:38206776-38206795 | None:intergenic | 25.0% |
| !!! | CTTTTACAGTTTTGATGTTA+TGG | + | chr3.2:38205443-38205462 | MS.gene000509:intron | 25.0% |
| !!! | GGGTTTAAATTTTGAAAAGA+GGG | + | chr3.2:38205490-38205509 | MS.gene000509:intron | 25.0% |
| !!! | GTTCTAGTTACTGAAATTTT+AGG | + | chr3.2:38205105-38205124 | MS.gene000509:intron | 25.0% |
| !!! | GTTCTGGTTTTTGATATTTT+AGG | + | chr3.2:38204483-38204502 | MS.gene000509:intron | 25.0% |
| !!! | TGTCTTTTTGATTTGTGATT+TGG | + | chr3.2:38208394-38208413 | MS.gene000509:intron | 25.0% |
| !!! | TTTTATTTAGGAGCTTTGTT+TGG | + | chr3.2:38204989-38205008 | MS.gene000509:intron | 25.0% |
| !!! | TTTTTAAGGGCATATCTTAT+GGG | + | chr3.2:38207107-38207126 | MS.gene000509:intron | 25.0% |
| !!! | TTTTTTAAGGGCATATCTTA+TGG | + | chr3.2:38207106-38207125 | MS.gene000509:intron | 25.0% |
| AAATTCATCATCTCAAGAAG+GGG | - | chr3.2:38205074-38205093 | None:intergenic | 30.0% | |
| AACAACCACACAATCAATTT+CGG | + | chr3.2:38206919-38206938 | MS.gene000509:intron | 30.0% | |
| AAGAGATTGCAGTTAAGTTA+TGG | - | chr3.2:38206145-38206164 | None:intergenic | 30.0% | |
| AATGTGTTCCTCTTCAAAAT+TGG | + | chr3.2:38207036-38207055 | MS.gene000509:intron | 30.0% | |
| ACAAATTCATCATCTCAAGA+AGG | - | chr3.2:38205076-38205095 | None:intergenic | 30.0% | |
| AGAAACCTGTATGATTTAGT+GGG | - | chr3.2:38208366-38208385 | None:intergenic | 30.0% | |
| AGACTTCTAATTCTTTCACA+TGG | - | chr3.2:38207888-38207907 | None:intergenic | 30.0% | |
| AGGAATTCAACGATACATAA+AGG | - | chr3.2:38208169-38208188 | None:intergenic | 30.0% | |
| AGGATTAGGAAATGTAATGA+TGG | + | chr3.2:38204714-38204733 | MS.gene000509:intron | 30.0% | |
| AGTATCACATTCAAAACGTA+CGG | - | chr3.2:38207329-38207348 | None:intergenic | 30.0% | |
| ATACAATGTAGTGAGTATCA+AGG | - | chr3.2:38206058-38206077 | None:intergenic | 30.0% | |
| CAAATTCATCATCTCAAGAA+GGG | - | chr3.2:38205075-38205094 | None:intergenic | 30.0% | |
| CCAAAAAACAATGTGAAGAA+TGG | + | chr3.2:38206774-38206793 | MS.gene000509:CDS | 30.0% | |
| CTGTCTACCATAAACATAAA+CGG | - | chr3.2:38205941-38205960 | None:intergenic | 30.0% | |
| GAGAAATTGTGAAATGAGAA+TGG | + | chr3.2:38204762-38204781 | MS.gene000509:intron | 30.0% | |
| GGTAAGTGTTATACTAATGA+TGG | - | chr3.2:38206020-38206039 | None:intergenic | 30.0% | |
| GTACATTACATGCATTAAAC+AGG | - | chr3.2:38206882-38206901 | None:intergenic | 30.0% | |
| GTTATTTGGATACACAAACT+GGG | - | chr3.2:38207479-38207498 | None:intergenic | 30.0% | |
| TAAGCCTTTCTTATACAAGA+TGG | - | chr3.2:38206981-38207000 | None:intergenic | 30.0% | |
| TCAATTCAATACTTGAGAGT+TGG | - | chr3.2:38205866-38205885 | None:intergenic | 30.0% | |
| TCAGAAACAAAGTAGACAAA+CGG | - | chr3.2:38205374-38205393 | None:intergenic | 30.0% | |
| TCATTCTCATCAAAAGCAAT+TGG | - | chr3.2:38208446-38208465 | None:intergenic | 30.0% | |
| TCTTGTATAAGAAAGGCTTA+AGG | + | chr3.2:38206981-38207000 | MS.gene000509:intron | 30.0% | |
| TGTAATGTGTATTCGCAATT+CGG | + | chr3.2:38205681-38205700 | MS.gene000509:intron | 30.0% | |
| TGTTAAATAGGAATGGGAAT+GGG | + | chr3.2:38204149-38204168 | MS.gene000509:intron | 30.0% | |
| TTGTTAAATAGGAATGGGAA+TGG | + | chr3.2:38204148-38204167 | MS.gene000509:intron | 30.0% | |
| ! | AGAACTCTACTTGATAGTAT+TGG | + | chr3.2:38205763-38205782 | MS.gene000509:intron | 30.0% |
| ! | ATACAAAGAAGTATGATCCT+TGG | + | chr3.2:38207852-38207871 | MS.gene000509:intron | 30.0% |
| ! | CTTTAGTTTCTGTTTAAGTG+AGG | + | chr3.2:38205901-38205920 | MS.gene000509:intron | 30.0% |
| ! | TAAAATAGCTGATGTTTTGC+TGG | + | chr3.2:38206340-38206359 | MS.gene000509:intron | 30.0% |
| ! | TGTTATTTGGATACACAAAC+TGG | - | chr3.2:38207480-38207499 | None:intergenic | 30.0% |
| ! | TTGGTAGCTAAAATGTTGAA+TGG | + | chr3.2:38205008-38205027 | MS.gene000509:intron | 30.0% |
| !! | AATTTGTAGATTTCAGGTTC+TGG | + | chr3.2:38204839-38204858 | MS.gene000509:intron | 30.0% |
| !! | ATGATGAATTTGTTGATTGC+GGG | + | chr3.2:38204461-38204480 | MS.gene000509:intron | 30.0% |
| !! | CATTGTATTTTTCGATCTCA+AGG | + | chr3.2:38206070-38206089 | MS.gene000509:intron | 30.0% |
| !! | CTAAAACACCAATTTTGAAG+AGG | - | chr3.2:38207047-38207066 | None:intergenic | 30.0% |
| !! | GATGATGAATTTGTTGATTG+CGG | + | chr3.2:38204460-38204479 | MS.gene000509:intron | 30.0% |
| !! | GGGGTTTAAATTTTGAAAAG+AGG | + | chr3.2:38205489-38205508 | MS.gene000509:intron | 30.0% |
| !! | TTTTAAGGGCATATCTTATG+GGG | + | chr3.2:38207108-38207127 | MS.gene000509:intron | 30.0% |
| !!! | CCATTCTTCACATTGTTTTT+TGG | - | chr3.2:38206777-38206796 | None:intergenic | 30.0% |
| !!! | GACTTAAAAAGGTGTTTTTG+AGG | - | chr3.2:38206488-38206507 | None:intergenic | 30.0% |
| !!! | TGATTTGGTAAACATTTTGC+AGG | + | chr3.2:38206565-38206584 | MS.gene000509:intron | 30.0% |
| !!! | TTCTGGTTTCTGAAGTTTTA+TGG | + | chr3.2:38204856-38204875 | MS.gene000509:intron | 30.0% |
| !!! | TTTTGACTTTTTGATGTGAC+TGG | + | chr3.2:38205303-38205322 | MS.gene000509:intron | 30.0% |
| AAGACAATGTGCATCGTAAT+GGG | + | chr3.2:38205515-38205534 | MS.gene000509:CDS | 35.0% | |
| ACAAATTCATCATCCCAAAC+AGG | - | chr3.2:38204454-38204473 | None:intergenic | 35.0% | |
| AGAAATTATCTGGTTGTCCA+TGG | + | chr3.2:38206183-38206202 | MS.gene000509:intron | 35.0% | |
| AGAAGTTTGTACTTCTGATG+CGG | + | chr3.2:38208098-38208117 | MS.gene000509:intron | 35.0% | |
| AGATAAAAGTGAATCTACCG+TGG | + | chr3.2:38207618-38207637 | MS.gene000509:CDS | 35.0% | |
| AGGATATTATCATCGCTCAA+AGG | + | chr3.2:38208008-38208027 | MS.gene000509:CDS | 35.0% | |
| ATAGCTTCAGGTCATAATTC+TGG | - | chr3.2:38205823-38205842 | None:intergenic | 35.0% | |
| ATCCCTTCAGATATCTTCAT+TGG | - | chr3.2:38207424-38207443 | None:intergenic | 35.0% | |
| ATGCTTTCCGAATTTCAGTA+GGG | - | chr3.2:38206628-38206647 | None:intergenic | 35.0% | |
| ATGGGAATATCATGACTCTT+CGG | + | chr3.2:38207237-38207256 | MS.gene000509:CDS | 35.0% | |
| ATGGGACTGAAATGAATAAG+GGG | + | chr3.2:38207293-38207312 | MS.gene000509:CDS | 35.0% | |
| CAACGAACATAAGAACAAAG+AGG | - | chr3.2:38204649-38204668 | None:intergenic | 35.0% | |
| CAATGCACACAATACTCAAT+GGG | + | chr3.2:38207219-38207238 | MS.gene000509:CDS | 35.0% | |
| CTTATTACTATTAGCGCGAT+GGG | + | chr3.2:38206952-38206971 | MS.gene000509:intron | 35.0% | |
| CTTATTCATTTCAGTCCCAT+CGG | - | chr3.2:38207293-38207312 | None:intergenic | 35.0% | |
| GACACCATCTTGTATAAGAA+AGG | + | chr3.2:38206974-38206993 | MS.gene000509:intron | 35.0% | |
| GAGAAACCTGTATGATTTAG+TGG | - | chr3.2:38208367-38208386 | None:intergenic | 35.0% | |
| GAGAAGAAAGAAAATGGAGA+TGG | + | chr3.2:38207690-38207709 | MS.gene000509:CDS | 35.0% | |
| GATGGGACTGAAATGAATAA+GGG | + | chr3.2:38207292-38207311 | MS.gene000509:CDS | 35.0% | |
| GCAAAGTTTCTTAAAGCTTG+TGG | + | chr3.2:38206587-38206606 | MS.gene000509:CDS | 35.0% | |
| GCACTCAATACAAAAGTAAG+TGG | - | chr3.2:38208280-38208299 | None:intergenic | 35.0% | |
| GTGAAATACTGAAATGTGAG+TGG | + | chr3.2:38204581-38204600 | MS.gene000509:intron | 35.0% | |
| GTTCACAGGAAAGATATTTG+CGG | + | chr3.2:38208416-38208435 | MS.gene000509:intron | 35.0% | |
| GTTCTTATGTTCGTTGTTGT+TGG | + | chr3.2:38204653-38204672 | MS.gene000509:intron | 35.0% | |
| TATTTCATCCTGTGAGTCAT+CGG | + | chr3.2:38207351-38207370 | MS.gene000509:CDS | 35.0% | |
| TCCCTTCAGATATCTTCATT+GGG | - | chr3.2:38207423-38207442 | None:intergenic | 35.0% | |
| TCTTATTACTATTAGCGCGA+TGG | + | chr3.2:38206951-38206970 | MS.gene000509:intron | 35.0% | |
| TTCATGCATGTTTAGCTGTT+TGG | + | chr3.2:38205641-38205660 | MS.gene000509:intron | 35.0% | |
| TTGAAGAACCTAAATTCGGA+CGG | - | chr3.2:38204390-38204409 | None:intergenic | 35.0% | |
| TTGAATGGTTGGACATTAGT+TGG | - | chr3.2:38206743-38206762 | None:intergenic | 35.0% | |
| ! | GAAGAGGAACACATTTTCTT+AGG | - | chr3.2:38207031-38207050 | None:intergenic | 35.0% |
| ! | GAATTTGCTCTTTGTAAAGC+AGG | + | chr3.2:38205329-38205348 | MS.gene000509:intron | 35.0% |
| ! | GTAAGTGGTCTTTTGTCAAA+TGG | - | chr3.2:38208265-38208284 | None:intergenic | 35.0% |
| ! | TACTGAAATTCGGAAAGCAT+CGG | + | chr3.2:38206628-38206647 | MS.gene000509:CDS | 35.0% |
| !! | AATGGGAGAAATTTTGAGGA+GGG | + | chr3.2:38205532-38205551 | MS.gene000509:CDS | 35.0% |
| !! | AATTAAGCTGGATTTTGGGT+TGG | + | chr3.2:38204305-38204324 | MS.gene000509:intron | 35.0% |
| !! | ACATTACATTGGCTTTGTTG+TGG | - | chr3.2:38203854-38203873 | None:intergenic | 35.0% |
| !! | ACGGTAGATTCACTTTTATC+TGG | - | chr3.2:38207619-38207638 | None:intergenic | 35.0% |
| !! | AGTCTCGCGATTTTGATAAT+TGG | + | chr3.2:38208339-38208358 | MS.gene000509:intron | 35.0% |
| !! | ATTTTTCGATCTCAAGGTTC+TGG | + | chr3.2:38206076-38206095 | MS.gene000509:intron | 35.0% |
| !! | CTTCTGGTTGCTGAAATTTT+TGG | + | chr3.2:38205197-38205216 | MS.gene000509:intron | 35.0% |
| !! | TAATGGGAGAAATTTTGAGG+AGG | + | chr3.2:38205531-38205550 | MS.gene000509:CDS | 35.0% |
| !! | TCGTAATGGGAGAAATTTTG+AGG | + | chr3.2:38205528-38205547 | MS.gene000509:CDS | 35.0% |
| !! | TGATTTGTGATTTGGTTCAC+AGG | + | chr3.2:38208402-38208421 | MS.gene000509:intron | 35.0% |
| !!! | TCACATTGTTTTTTGGGAGT+TGG | - | chr3.2:38206770-38206789 | None:intergenic | 35.0% |
| AACCACACAATCAATTTCGG+TGG | + | chr3.2:38206922-38206941 | MS.gene000509:intron | 40.0% | |
| AATAGGAATGGGAATGGGAA+TGG | + | chr3.2:38204154-38204173 | MS.gene000509:intron | 40.0% | |
| ACACAAACTGGGACTTAACA+GGG | - | chr3.2:38207468-38207487 | None:intergenic | 40.0% | |
| ACCCCAATGAAGATATCTGA+AGG | + | chr3.2:38207418-38207437 | MS.gene000509:CDS | 40.0% | |
| AGAAGCCAAGAACGAAACTT+TGG | - | chr3.2:38206698-38206717 | None:intergenic | 40.0% | |
| ATACACCACAAATCTTAGCC+AGG | - | chr3.2:38206215-38206234 | None:intergenic | 40.0% | |
| ATCCACCGAAATTGATTGTG+TGG | - | chr3.2:38206927-38206946 | None:intergenic | 40.0% | |
| ATCTTCATTGGGGTAGGATT+TGG | - | chr3.2:38207412-38207431 | None:intergenic | 40.0% | |
| ATGCATGTTTAGCTGTTTGG+AGG | + | chr3.2:38205644-38205663 | MS.gene000509:intron | 40.0% | |
| CAAGTACCCCTACTGAAATT+CGG | + | chr3.2:38206618-38206637 | MS.gene000509:CDS | 40.0% | |
| CACATGGAAAATAGCTACCA+AGG | - | chr3.2:38207872-38207891 | None:intergenic | 40.0% | |
| CACTGACACTTCTTGGATTA+GGG | + | chr3.2:38203936-38203955 | MS.gene000509:intron | 40.0% | |
| CCAATGCACACAATACTCAA+TGG | + | chr3.2:38207218-38207237 | MS.gene000509:CDS | 40.0% | |
| CCAGAATCGTTACTACATGA+AGG | - | chr3.2:38206671-38206690 | None:intergenic | 40.0% | |
| CCCCAATGAAGATATCTGAA+GGG | + | chr3.2:38207419-38207438 | MS.gene000509:CDS | 40.0% | |
| CCCTTCAGATATCTTCATTG+GGG | - | chr3.2:38207422-38207441 | None:intergenic | 40.0% | |
| CCTTCATGTAGTAACGATTC+TGG | + | chr3.2:38206668-38206687 | MS.gene000509:CDS | 40.0% | |
| CGAAGATGTCTCATTGAGAA+TGG | + | chr3.2:38205797-38205816 | MS.gene000509:intron | 40.0% | |
| CGATGGGACTGAAATGAATA+AGG | + | chr3.2:38207291-38207310 | MS.gene000509:CDS | 40.0% | |
| CTTTGTAAAGCAGGATGATG+TGG | + | chr3.2:38205338-38205357 | MS.gene000509:intron | 40.0% | |
| GAACACGAAAGCAAGTGAAA+AGG | - | chr3.2:38203770-38203789 | None:intergenic | 40.0% | |
| GAAGACAATGTGCATCGTAA+TGG | + | chr3.2:38205514-38205533 | MS.gene000509:CDS | 40.0% | |
| GAATATCATGACTCTTCGGA+AGG | + | chr3.2:38207241-38207260 | MS.gene000509:CDS | 40.0% | |
| GATATAAGGCTAAGACACTG+AGG | + | chr3.2:38205717-38205736 | MS.gene000509:intron | 40.0% | |
| GATGCTTTCCGAATTTCAGT+AGG | - | chr3.2:38206629-38206648 | None:intergenic | 40.0% | |
| GCAAACAACAGTGCTTTCAT+AGG | - | chr3.2:38208038-38208057 | None:intergenic | 40.0% | |
| GGAGGAGAGAAGAAAGAAAA+TGG | + | chr3.2:38207684-38207703 | MS.gene000509:CDS | 40.0% | |
| GTGTATCCAAATAACAGCCT+AGG | + | chr3.2:38207484-38207503 | MS.gene000509:CDS | 40.0% | |
| GTTGAGATGATCGCTTCATT+CGG | + | chr3.2:38205030-38205049 | MS.gene000509:intron | 40.0% | |
| TACAAGCATATGCATGTCCT+GGG | + | chr3.2:38206268-38206287 | MS.gene000509:intron | 40.0% | |
| TACACAAACTGGGACTTAAC+AGG | - | chr3.2:38207469-38207488 | None:intergenic | 40.0% | |
| TCAAGGCTTTCTTAGTATCG+TGG | - | chr3.2:38206041-38206060 | None:intergenic | 40.0% | |
| TCAGATATCTTCATTGGGGT+AGG | - | chr3.2:38207418-38207437 | None:intergenic | 40.0% | |
| TCCTCCAAAATAACAGATGC+AGG | - | chr3.2:38207670-38207689 | None:intergenic | 40.0% | |
| TGAAGAACCTAAATTCGGAC+GGG | - | chr3.2:38204389-38204408 | None:intergenic | 40.0% | |
| TGCTTTCCGAATTTCAGTAG+GGG | - | chr3.2:38206627-38206646 | None:intergenic | 40.0% | |
| TTAACAGGGTAAACAGTTCC+AGG | - | chr3.2:38207454-38207473 | None:intergenic | 40.0% | |
| TTAATAACCTGCTAGGTGTG+TGG | - | chr3.2:38206823-38206842 | None:intergenic | 40.0% | |
| TTCAACGTCATGCTAAACTC+AGG | - | chr3.2:38208189-38208208 | None:intergenic | 40.0% | |
| TTCTGAGTATGTTCTGCTTC+TGG | + | chr3.2:38205181-38205200 | MS.gene000509:intron | 40.0% | |
| TTGGTCCCACTAAATCATAC+AGG | + | chr3.2:38208358-38208377 | MS.gene000509:intron | 40.0% | |
| ! | AATAGCTGATGTTTTGCTGG+TGG | + | chr3.2:38206343-38206362 | MS.gene000509:intron | 40.0% |
| ! | ACTGACACTTCTTGGATTAG+GGG | + | chr3.2:38203937-38203956 | MS.gene000509:intron | 40.0% |
| ! | CATTGAAGAAGTAAGCACTG+TGG | - | chr3.2:38205964-38205983 | None:intergenic | 40.0% |
| ! | CCATTGAGTATTGTGTGCAT+TGG | - | chr3.2:38207221-38207240 | None:intergenic | 40.0% |
| ! | CTCTAAGAGCAAGATACTTG+AGG | + | chr3.2:38207516-38207535 | MS.gene000509:CDS | 40.0% |
| !! | AATTTGTTGATTGCGGGTTC+TGG | + | chr3.2:38204467-38204486 | MS.gene000509:intron | 40.0% |
| !! | CAGTGTCTTAGCCTTATATC+AGG | - | chr3.2:38205717-38205736 | None:intergenic | 40.0% |
| !! | GAAGCCTGCATCTGTTATTT+TGG | + | chr3.2:38207663-38207682 | MS.gene000509:CDS | 40.0% |
| !! | TATGAAGCACTGACACTTCT+TGG | + | chr3.2:38203929-38203948 | MS.gene000509:intron | 40.0% |
| !! | TCTACTTTGTTTCTGACCGA+AGG | + | chr3.2:38205378-38205397 | MS.gene000509:CDS | 40.0% |
| !!! | CATTGTTTTTTGGGAGTTGG+CGG | - | chr3.2:38206767-38206786 | None:intergenic | 40.0% |
| AGAAGACAAGCCTTCTTCCA+CGG | - | chr3.2:38207638-38207657 | None:intergenic | 45.0% | |
| AGCCAAGAACGAAACTTTGG+AGG | - | chr3.2:38206695-38206714 | None:intergenic | 45.0% | |
| AGGGATCACAGAGTGATGAT+AGG | + | chr3.2:38205551-38205570 | MS.gene000509:CDS | 45.0% | |
| AGTGAATCTACCGTGGAAGA+AGG | + | chr3.2:38207625-38207644 | MS.gene000509:CDS | 45.0% | |
| ATCTTCCTTGAATCTTGCGC+AGG | - | chr3.2:38207556-38207575 | None:intergenic | 45.0% | |
| ATGACTCTTCGGAAGGAAGT+GGG | + | chr3.2:38207248-38207267 | MS.gene000509:CDS | 45.0% | |
| ATGTTCCTGCGCAAGATTCA+AGG | + | chr3.2:38207548-38207567 | MS.gene000509:CDS | 45.0% | |
| CAAAGTCACAGACACTGACA+CGG | - | chr3.2:38204071-38204090 | None:intergenic | 45.0% | |
| CTACAAGCATATGCATGTCC+TGG | + | chr3.2:38206267-38206286 | MS.gene000509:intron | 45.0% | |
| GAAGAACCTAAATTCGGACG+GGG | - | chr3.2:38204388-38204407 | None:intergenic | 45.0% | |
| GAATGGATCCTAAGACCTTG+AGG | - | chr3.2:38204364-38204383 | None:intergenic | 45.0% | |
| GAGCAAGATACTTGAGGAAG+AGG | + | chr3.2:38207522-38207541 | MS.gene000509:CDS | 45.0% | |
| GCATTCCTGGCTAAGATTTG+TGG | + | chr3.2:38206207-38206226 | MS.gene000509:intron | 45.0% | |
| GCCATTTCGCTCCTGATATA+AGG | + | chr3.2:38205703-38205722 | MS.gene000509:intron | 45.0% | |
| GCCTTATATCAGGAGCGAAA+TGG | - | chr3.2:38205707-38205726 | None:intergenic | 45.0% | |
| GGACTGAAATGAATAAGGGG+AGG | + | chr3.2:38207296-38207315 | MS.gene000509:CDS | 45.0% | |
| GTCCTCCAAAGTTTCGTTCT+TGG | + | chr3.2:38206690-38206709 | MS.gene000509:CDS | 45.0% | |
| TCCAAATAACAGCCTAGGTG+AGG | + | chr3.2:38207489-38207508 | MS.gene000509:CDS | 45.0% | |
| TCCTCACCTAGGCTGTTATT+TGG | - | chr3.2:38207493-38207512 | None:intergenic | 45.0% | |
| TCTTAGAGACATCCTCACCT+AGG | - | chr3.2:38207504-38207523 | None:intergenic | 45.0% | |
| TGATAGGCAGCTTAAAGACG+AGG | + | chr3.2:38205567-38205586 | MS.gene000509:CDS | 45.0% | |
| TGCTGCACATTGGATTGAAG+AGG | + | chr3.2:38207765-38207784 | MS.gene000509:CDS | 45.0% | |
| TGGAAGAAGGCTTGTCTTCT+TGG | + | chr3.2:38207638-38207657 | MS.gene000509:CDS | 45.0% | |
| TTCATTTCAGTCCCATCGGT+CGG | - | chr3.2:38207289-38207308 | None:intergenic | 45.0% | |
| TTCTCCAACCTCTCTTCGAA+CGG | - | chr3.2:38207977-38207996 | None:intergenic | 45.0% | |
| ! | ATCTCAAGGTTCTGGCAGTA+GGG | + | chr3.2:38206084-38206103 | MS.gene000509:intron | 45.0% |
| ! | GCACTGACACTTCTTGGATT+AGG | + | chr3.2:38203935-38203954 | MS.gene000509:intron | 45.0% |
| !! | GTTGGAGAAGGCATTATCTG+AGG | + | chr3.2:38207988-38208007 | MS.gene000509:CDS | 45.0% |
| !! | TTCAGTAGGGGTACTTGCTA+TGG | - | chr3.2:38206615-38206634 | None:intergenic | 45.0% |
| !!! | GCCTGCATCTGTTATTTTGG+AGG | + | chr3.2:38207666-38207685 | MS.gene000509:CDS | 45.0% |
| !!! | GGATTTTGGGTTGGTGGTAT+TGG | + | chr3.2:38204314-38204333 | MS.gene000509:intron | 45.0% |
| !!! | TAAGCTGGATTTTGGGTTGG+TGG | + | chr3.2:38204308-38204327 | MS.gene000509:intron | 45.0% |
| AAAAGTTTGTGAGCCAGCCC+AGG | - | chr3.2:38206288-38206307 | None:intergenic | 50.0% | |
| ACCATAAGCCGATGACTCAC+AGG | - | chr3.2:38207362-38207381 | None:intergenic | 50.0% | |
| CATGACTCTTCGGAAGGAAG+TGG | + | chr3.2:38207247-38207266 | MS.gene000509:CDS | 50.0% | |
| CATTCTCCCCGTCCGAATTT+AGG | + | chr3.2:38204379-38204398 | MS.gene000509:intron | 50.0% | |
| CTAAATTCGGACGGGGAGAA+TGG | - | chr3.2:38204381-38204400 | None:intergenic | 50.0% | |
| GTTCGAAGAGAGGTTGGAGA+AGG | + | chr3.2:38207976-38207995 | MS.gene000509:CDS | 50.0% | |
| TAGCATGCCAGCTCACTTTC+TGG | - | chr3.2:38207952-38207971 | None:intergenic | 50.0% | |
| TCTGAAGGGATGCAAACTCC+TGG | + | chr3.2:38207433-38207452 | MS.gene000509:CDS | 50.0% | |
| TCTTAGCCAGGAATGCACCA+TGG | - | chr3.2:38206203-38206222 | None:intergenic | 50.0% | |
| TGGATCCTAAGACCTTGAGG+AGG | - | chr3.2:38204361-38204380 | None:intergenic | 50.0% | |
| TTCAGGACCAGAAAGTGAGC+TGG | + | chr3.2:38207942-38207961 | MS.gene000509:intron | 50.0% | |
| ! | CCTATCGACAGGAGTTTTGC+GGG | - | chr3.2:38207728-38207747 | None:intergenic | 50.0% |
| ! | GATCTCAAGGTTCTGGCAGT+AGG | + | chr3.2:38206083-38206102 | MS.gene000509:intron | 50.0% |
| ! | GCCTATCGACAGGAGTTTTG+CGG | - | chr3.2:38207729-38207748 | None:intergenic | 50.0% |
| ! | GCTGATGTTTTGCTGGTGGA+AGG | + | chr3.2:38206347-38206366 | MS.gene000509:intron | 50.0% |
| !! | AGTCATCGGCTTATGGTGGA+TGG | + | chr3.2:38207365-38207384 | MS.gene000509:CDS | 50.0% |
| !! | GAGTTGGCGGATTGAATGGT+TGG | - | chr3.2:38206754-38206773 | None:intergenic | 50.0% |
| !! | TCCTGTGAGTCATCGGCTTA+TGG | + | chr3.2:38207358-38207377 | MS.gene000509:CDS | 50.0% |
| !! | TGGGTTGGTGGTATTGGCTT+GGG | + | chr3.2:38204320-38204339 | MS.gene000509:intron | 50.0% |
| !! | TGTGAGTCATCGGCTTATGG+TGG | + | chr3.2:38207361-38207380 | MS.gene000509:CDS | 50.0% |
| !! | TTGGGAGTTGGCGGATTGAA+TGG | - | chr3.2:38206758-38206777 | None:intergenic | 50.0% |
| !! | TTGGGTTGGTGGTATTGGCT+TGG | + | chr3.2:38204319-38204338 | MS.gene000509:intron | 50.0% |
| ACACGGCACAGACACTGACA+CGG | - | chr3.2:38204054-38204073 | None:intergenic | 55.0% | |
| AGCATATGCATGTCCTGGGC+TGG | + | chr3.2:38206272-38206291 | MS.gene000509:intron | 55.0% | |
| ATGCTACGCCGTTCGAAGAG+AGG | + | chr3.2:38207966-38207985 | MS.gene000509:CDS | 55.0% | |
| ATGCTCCTCCTCCTAAGTGG+TGG | + | chr3.2:38207797-38207816 | MS.gene000509:CDS | 55.0% | |
| CCATTGCCATCCCACCACTT+AGG | - | chr3.2:38207811-38207830 | None:intergenic | 55.0% | |
| CCCGCAAAACTCCTGTCGAT+AGG | + | chr3.2:38207725-38207744 | MS.gene000509:CDS | 55.0% | |
| CTGATGCTCCTCCTCCTAAG+TGG | + | chr3.2:38207794-38207813 | MS.gene000509:CDS | 55.0% | |
| GGAGCTATCATCCGACCGAT+GGG | + | chr3.2:38207275-38207294 | MS.gene000509:CDS | 55.0% | |
| GGTTGTCCATGGTGCATTCC+TGG | + | chr3.2:38206194-38206213 | MS.gene000509:intron | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3.2:38204353-38204372 | MS.gene000509:intron | 55.0% | |
| GTTCAGACCACACACCTAGC+AGG | + | chr3.2:38206813-38206832 | MS.gene000509:CDS | 55.0% | |
| TACGCCGTTCGAAGAGAGGT+TGG | + | chr3.2:38207970-38207989 | MS.gene000509:CDS | 55.0% | |
| TCTTCGGAAGGAAGTGGGCA+GGG | + | chr3.2:38207253-38207272 | MS.gene000509:CDS | 55.0% | |
| TGCTCCTCCTCCTAAGTGGT+GGG | + | chr3.2:38207798-38207817 | MS.gene000509:CDS | 55.0% | |
| TTCATCCCATCCACAGTCCG+TGG | + | chr3.2:38208499-38208518 | MS.gene000509:CDS | 55.0% | |
| TTGCCATCCCACCACTTAGG+AGG | - | chr3.2:38207808-38207827 | None:intergenic | 55.0% | |
| ! | CCTAAGTGGTGGGATGGCAA+TGG | + | chr3.2:38207808-38207827 | MS.gene000509:CDS | 55.0% |
| ! | GCTTTGTTGTGGTGCCGAGA+CGG | - | chr3.2:38203843-38203862 | None:intergenic | 55.0% |
| !! | CCAATGATGGGCCTATCGAC+AGG | - | chr3.2:38207739-38207758 | None:intergenic | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3.2:38204327-38204346 | MS.gene000509:intron | 55.0% |
| CCATCCCACCACTTAGGAGG+AGG | - | chr3.2:38207805-38207824 | None:intergenic | 60.0% | |
| CTCTTCGGAAGGAAGTGGGC+AGG | + | chr3.2:38207252-38207271 | MS.gene000509:CDS | 60.0% | |
| CTTCGGAAGGAAGTGGGCAG+GGG | + | chr3.2:38207254-38207273 | MS.gene000509:CDS | 60.0% | |
| GGGAGCTATCATCCGACCGA+TGG | + | chr3.2:38207274-38207293 | MS.gene000509:CDS | 60.0% | |
| ! | CCTCCTCCTAAGTGGTGGGA+TGG | + | chr3.2:38207802-38207821 | MS.gene000509:CDS | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr3.2:38204346-38204365 | MS.gene000509:intron | 60.0% |
| ! | TTGAGGAGGAGCACACTCCC+AGG | - | chr3.2:38204347-38204366 | None:intergenic | 60.0% |
| !! | GGTGGTATTGGCTTGGGACC+TGG | + | chr3.2:38204326-38204345 | MS.gene000509:intron | 60.0% |
| ! | ACGACGCCACGGACTGTGGA+TGG | - | chr3.2:38208508-38208527 | None:intergenic | 65.0% |
| ! | AGGCAGCGGCGGATTTAGCG+TGG | - | chr3.2:38203809-38203828 | None:intergenic | 65.0% |
| ! | CAACACGACGCCACGGACTG+TGG | - | chr3.2:38208512-38208531 | None:intergenic | 65.0% |
| ! | CAGCGGCGGATTTAGCGTGG+TGG | - | chr3.2:38203806-38203825 | None:intergenic | 65.0% |
| ! | CGACGCCACGGACTGTGGAT+GGG | - | chr3.2:38208507-38208526 | None:intergenic | 65.0% |
| ! | GTTGTGGTGCCGAGACGGCA+CGG | - | chr3.2:38203838-38203857 | None:intergenic | 65.0% |
| ! | GTGGTGCCGAGACGGCACGG+CGG | - | chr3.2:38203835-38203854 | None:intergenic | 75.0% |
| ! | CCTCCGCCGCCGTGCCGTCT+CGG | + | chr3.2:38203826-38203845 | MS.gene000509:CDS | 80.0% |
| ! | GTGCCGAGACGGCACGGCGG+CGG | - | chr3.2:38203832-38203851 | None:intergenic | 80.0% |
| ! | CACGGCGGCGGAGGCAGCGG+CGG | - | chr3.2:38203820-38203839 | None:intergenic | 85.0% |
| ! | CCGAGACGGCACGGCGGCGG+AGG | - | chr3.2:38203829-38203848 | None:intergenic | 85.0% |
| ! | CGGCACGGCGGCGGAGGCAG+CGG | - | chr3.2:38203823-38203842 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 38203759 | 38208532 | 38203759 | ID=MS.gene000509 |
| chr3.2 | mRNA | 38203759 | 38208532 | 38203759 | ID=MS.gene000509.t1;Parent=MS.gene000509 |
| chr3.2 | exon | 38203759 | 38203866 | 38203759 | ID=MS.gene000509.t1.exon1;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38203759 | 38203866 | 38203759 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38205351 | 38205399 | 38205351 | ID=MS.gene000509.t1.exon2;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38205351 | 38205399 | 38205351 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38205509 | 38205588 | 38205509 | ID=MS.gene000509.t1.exon3;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38205509 | 38205588 | 38205509 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38206587 | 38206834 | 38206587 | ID=MS.gene000509.t1.exon4;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38206587 | 38206834 | 38206587 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38207210 | 38207861 | 38207210 | ID=MS.gene000509.t1.exon5;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38207210 | 38207861 | 38207210 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38207947 | 38208029 | 38207947 | ID=MS.gene000509.t1.exon6;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38207947 | 38208029 | 38207947 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| chr3.2 | exon | 38208424 | 38208532 | 38208424 | ID=MS.gene000509.t1.exon7;Parent=MS.gene000509.t1 |
| chr3.2 | CDS | 38208424 | 38208532 | 38208424 | ID=cds.MS.gene000509.t1;Parent=MS.gene000509.t1 |
| Gene Sequence |
| Protein sequence |
