Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019180.t1 | KEH33680.1 | 91.6 | 443 | 32 | 4 | 1 | 442 | 1 | 439 | 5.40E-228 | 800 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019180.t1 | F4IDQ5 | 38.7 | 486 | 219 | 17 | 1 | 441 | 29 | 480 | 1.5e-61 | 238.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019180.t1 | A0A072V681 | 91.6 | 443 | 32 | 4 | 1 | 442 | 1 | 439 | 3.9e-228 | 800.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019180 | MS.gene47715 | PPI |
| MS.gene019180 | MS.gene22197 | PPI |
| MS.gene000509 | MS.gene019180 | PPI |
| MS.gene017059 | MS.gene019180 | PPI |
| MS.gene019180 | MS.gene69498 | PPI |
| MS.gene019180 | MS.gene038276 | PPI |
| MS.gene019180 | MS.gene48029 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019180.t1 | MTR_3g450760 | 94.131 | 443 | 21 | 5 | 1 | 442 | 1 | 439 | 0.0 | 841 |
| MS.gene019180.t1 | MTR_5g090900 | 45.690 | 464 | 196 | 10 | 1 | 422 | 24 | 473 | 3.44e-116 | 348 |
| MS.gene019180.t1 | MTR_1g069610 | 39.683 | 126 | 62 | 4 | 284 | 401 | 317 | 436 | 4.95e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019180.t1 | AT1G06660 | 38.889 | 486 | 218 | 17 | 1 | 441 | 29 | 480 | 9.93e-75 | 242 |
| MS.gene019180.t1 | AT2G30820 | 35.974 | 467 | 215 | 14 | 1 | 433 | 1 | 417 | 2.37e-60 | 202 |
| MS.gene019180.t1 | AT2G30820 | 35.974 | 467 | 215 | 14 | 1 | 433 | 1 | 417 | 2.37e-60 | 202 |
Find 123 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCACCTAGGCTGTTATT+TGG | 0.189762 | 3.3:-37245728 | None:intergenic |
| GTCCTCCAAAGTTTCGTTCT+TGG | 0.196344 | 3.3:+37244929 | MS.gene019180:CDS |
| GAAGCCTGCATCTGTTATTT+TGG | 0.212458 | 3.3:+37245901 | MS.gene019180:CDS |
| CGGCACGGCGGCGGAGGCAG+CGG | 0.226596 | 3.3:-37242061 | None:intergenic |
| TAGCATGCCAGCTCACTTTC+TGG | 0.229927 | 3.3:-37246187 | None:intergenic |
| TTGTATTTGTTGGTTGAATT+TGG | 0.246872 | 3.3:-37246073 | None:intergenic |
| TGGAAGAAGGCTTGTCTTCT+TGG | 0.254792 | 3.3:+37245876 | MS.gene019180:CDS |
| CGATGGGACTGAAATGAATA+AGG | 0.261654 | 3.3:+37245529 | MS.gene019180:CDS |
| GGAGGAGAGAAGAAAGAAAA+TGG | 0.286742 | 3.3:+37245922 | MS.gene019180:CDS |
| ATCTTCATTGGGGTAGGATT+TGG | 0.293500 | 3.3:-37245647 | None:intergenic |
| TCCTGTGAGTCATCGGCTTA+TGG | 0.325210 | 3.3:+37245596 | MS.gene019180:CDS |
| TCATACTTCTTTGTATTTGT+TGG | 0.327303 | 3.3:-37246083 | None:intergenic |
| TACACAAACTGGGACTTAAC+AGG | 0.339806 | 3.3:-37245704 | None:intergenic |
| ATCCCTTCAGATATCTTCAT+TGG | 0.349727 | 3.3:-37245659 | None:intergenic |
| CCTTCATGTAGTAACGATTC+TGG | 0.376618 | 3.3:+37244907 | MS.gene019180:CDS |
| TTGAATGGTTGGACATTAGT+TGG | 0.377570 | 3.3:-37244979 | None:intergenic |
| TGTTATTTGGATACACAAAC+TGG | 0.390899 | 3.3:-37245715 | None:intergenic |
| CCTCCGCCGCCGTGCCGTCT+CGG | 0.397513 | 3.3:+37242067 | MS.gene019180:CDS |
| CCGAGACGGCACGGCGGCGG+AGG | 0.397598 | 3.3:-37242067 | None:intergenic |
| TCCCTTCAGATATCTTCATT+GGG | 0.406133 | 3.3:-37245658 | None:intergenic |
| CACGGCGGCGGAGGCAGCGG+CGG | 0.410655 | 3.3:-37242058 | None:intergenic |
| TCATTCTCATCAAAAGCAAT+TGG | 0.422122 | 3.3:-37246681 | None:intergenic |
| TTGGGAGTTGGCGGATTGAA+TGG | 0.422674 | 3.3:-37244994 | None:intergenic |
| CAAGTACCCCTACTGAAATT+CGG | 0.424717 | 3.3:+37244857 | MS.gene019180:CDS |
| TGCAGCAACCATCCCAATGA+TGG | 0.431713 | 3.3:-37245987 | None:intergenic |
| GAAGACAATGTGCATTGTAA+TGG | 0.431788 | 3.3:+37243754 | MS.gene019180:CDS |
| ATGTTCCTGCGCAAGATTCA+AGG | 0.435844 | 3.3:+37245786 | MS.gene019180:CDS |
| AGGGATCACAGAGTGATGAT+AGG | 0.453830 | 3.3:+37243791 | MS.gene019180:CDS |
| CCTGTCGATAGGCCCATCAT+TGG | 0.456758 | 3.3:+37245974 | MS.gene019180:CDS |
| AAGACAATGTGCATTGTAAT+GGG | 0.459347 | 3.3:+37243755 | MS.gene019180:CDS |
| GTGCCGAGACGGCACGGCGG+CGG | 0.460806 | 3.3:-37242070 | None:intergenic |
| TTAACAGGGTAAACAGTTCC+AGG | 0.469267 | 3.3:-37245689 | None:intergenic |
| GAGCAAGATACTTGAGGAAG+AGG | 0.471401 | 3.3:+37245760 | MS.gene019180:CDS |
| AGAAGCCAAGAACGAAACTT+TGG | 0.484007 | 3.3:-37244934 | None:intergenic |
| TCCTCCAAAATAACAGATGC+AGG | 0.487575 | 3.3:-37245905 | None:intergenic |
| GATGGGACTGAAATGAATAA+GGG | 0.488622 | 3.3:+37245530 | MS.gene019180:CDS |
| ATGGGAATATCATGACTCTT+CGG | 0.494202 | 3.3:+37245475 | MS.gene019180:CDS |
| CCAATGCACACAATACTCAA+TGG | 0.495131 | 3.3:+37245456 | MS.gene019180:CDS |
| GCAAAGTTTCTTAAAGCTTG+TGG | 0.503956 | 3.3:+37244826 | MS.gene019180:CDS |
| ATCTTCCTTGAATCTTGCGC+AGG | 0.504663 | 3.3:-37245791 | None:intergenic |
| CAATGCACACAATACTCAAT+GGG | 0.505196 | 3.3:+37245457 | MS.gene019180:CDS |
| TTCAGTAGGGGTACTTGCTA+TGG | 0.505440 | 3.3:-37244851 | None:intergenic |
| CTCTTCGGAAGGAAGTGGGC+AGG | 0.505993 | 3.3:+37245490 | MS.gene019180:CDS |
| CCAATGATGGGCCTATCGAC+AGG | 0.508176 | 3.3:-37245974 | None:intergenic |
| CCATTGAGTATTGTGTGCAT+TGG | 0.512181 | 3.3:-37245456 | None:intergenic |
| CTTCGGAAGGAAGTGGGCAG+GGG | 0.512249 | 3.3:+37245492 | MS.gene019180:CDS |
| TGCTCCTCCTCCTAAGTGGT+GGG | 0.512880 | 3.3:+37246036 | MS.gene019180:CDS |
| CATGACTCTTCGGAAGGAAG+TGG | 0.514139 | 3.3:+37245485 | MS.gene019180:CDS |
| GATGCTTTCCGAATTTCAGT+AGG | 0.514555 | 3.3:-37244865 | None:intergenic |
| CTGTCGATAGGCCCATCATT+GGG | 0.516223 | 3.3:+37245975 | MS.gene019180:CDS |
| ACGACGCCACAGACTGTGGA+TGG | 0.519434 | 3.3:-37246743 | None:intergenic |
| TCTTCGGAAGGAAGTGGGCA+GGG | 0.526061 | 3.3:+37245491 | MS.gene019180:CDS |
| TATTTCATCCTGTGAGTCAT+CGG | 0.528657 | 3.3:+37245589 | MS.gene019180:CDS |
| ATGCTCCTCCTCCTAAGTGG+TGG | 0.530708 | 3.3:+37246035 | MS.gene019180:CDS |
| GAGAAGAAAGAAAATGGAGA+TGG | 0.532138 | 3.3:+37245928 | MS.gene019180:CDS |
| TTAAAGATTAATAACCTGCT+AGG | 0.536769 | 3.3:-37245066 | None:intergenic |
| AGTGAATCTACCGTGGAAGA+AGG | 0.537717 | 3.3:+37245863 | MS.gene019180:CDS |
| TCTACTTTGTTTCTGACCGA+AGG | 0.540444 | 3.3:+37243618 | MS.gene019180:CDS |
| GTTCACAGGAAAGATATTTG+CGG | 0.540461 | 3.3:+37246654 | MS.gene019180:intron |
| CTTATTCATTTCAGTCCCAT+CGG | 0.540593 | 3.3:-37245528 | None:intergenic |
| GAGTTGGCGGATTGAATGGT+TGG | 0.541865 | 3.3:-37244990 | None:intergenic |
| GTTCAGACCACACACCTAGC+AGG | 0.546465 | 3.3:+37245052 | MS.gene019180:CDS |
| TCAGATATCTTCATTGGGGT+AGG | 0.551648 | 3.3:-37245653 | None:intergenic |
| TTCATTTCAGTCCCATCGGT+CGG | 0.552448 | 3.3:-37245524 | None:intergenic |
| ATGCTTTCCGAATTTCAGTA+GGG | 0.554306 | 3.3:-37244864 | None:intergenic |
| GGGAGCTATCATCCGACCGA+TGG | 0.556557 | 3.3:+37245512 | MS.gene019180:CDS |
| ACATTACATTGGCTTTGTTG+TGG | 0.556918 | 3.3:-37242092 | None:intergenic |
| GAACACGAAAGCAAGTGAAA+AGG | 0.559259 | 3.3:-37242008 | None:intergenic |
| TTCAGGACCAGAAAGTGAGC+TGG | 0.559748 | 3.3:+37246180 | MS.gene019180:intron |
| ACCATAAGCCGATGACTCAC+AGG | 0.559884 | 3.3:-37245597 | None:intergenic |
| CCTCCTCCTAAGTGGTGGGA+TGG | 0.560739 | 3.3:+37246040 | MS.gene019180:CDS |
| CCATTGCCATCCCACCACTT+AGG | 0.560739 | 3.3:-37246046 | None:intergenic |
| TCTGAAGGGATGCAAACTCC+TGG | 0.562862 | 3.3:+37245671 | MS.gene019180:CDS |
| GTTGTGGTGCCGAGACGGCA+CGG | 0.566404 | 3.3:-37242076 | None:intergenic |
| TCAGAAACAAAGTAGACAAA+CGG | 0.567517 | 3.3:-37243611 | None:intergenic |
| CCTAAGTGGTGGGATGGCAA+TGG | 0.569676 | 3.3:+37246046 | MS.gene019180:CDS |
| GTGTATCCAAATAACAGCCT+AGG | 0.571499 | 3.3:+37245722 | MS.gene019180:CDS |
| ATGCTACGCCGTTCGAAGAG+AGG | 0.575521 | 3.3:+37246204 | MS.gene019180:CDS |
| ACCCCAATGAAGATATCTGA+AGG | 0.577653 | 3.3:+37245656 | MS.gene019180:CDS |
| CCATCCCACCACTTAGGAGG+AGG | 0.578549 | 3.3:-37246040 | None:intergenic |
| AGTATCACATTCAAAACGTA+CGG | 0.579270 | 3.3:-37245564 | None:intergenic |
| TTGGGATGGTTGCTGCACAT+TGG | 0.584288 | 3.3:+37245993 | MS.gene019180:CDS |
| GGAGCTATCATCCGACCGAT+GGG | 0.587580 | 3.3:+37245513 | MS.gene019180:CDS |
| GTTCGAAGAGAGGTTGGAGA+AGG | 0.592220 | 3.3:+37246214 | MS.gene019180:CDS |
| CGATAGGCCCATCATTGGGA+TGG | 0.592976 | 3.3:+37245979 | MS.gene019180:CDS |
| AGCCAAGAACGAAACTTTGG+AGG | 0.594708 | 3.3:-37244931 | None:intergenic |
| TACTGAAATTCGGAAAGCAT+CGG | 0.598546 | 3.3:+37244867 | MS.gene019180:CDS |
| TTCTCCAACCTCTCTTCGAA+CGG | 0.599277 | 3.3:-37246212 | None:intergenic |
| AGTCATCGGCTTATGGTGGA+TGG | 0.599998 | 3.3:+37245603 | MS.gene019180:CDS |
| GCAGCAACCATCCCAATGAT+GGG | 0.601660 | 3.3:-37245986 | None:intergenic |
| CTGATGCTCCTCCTCCTAAG+TGG | 0.601801 | 3.3:+37246032 | MS.gene019180:CDS |
| TCCAAATAACAGCCTAGGTG+AGG | 0.601979 | 3.3:+37245727 | MS.gene019180:CDS |
| CTCTAAGAGCAAGATACTTG+AGG | 0.603618 | 3.3:+37245754 | MS.gene019180:CDS |
| AGGCAGCGGCGGATTTAGCG+TGG | 0.604654 | 3.3:-37242047 | None:intergenic |
| TTGCCATCCCACCACTTAGG+AGG | 0.606952 | 3.3:-37246043 | None:intergenic |
| TACGCCGTTCGAAGAGAGGT+TGG | 0.606989 | 3.3:+37246208 | MS.gene019180:CDS |
| GCTTTGTTGTGGTGCCGAGA+CGG | 0.608775 | 3.3:-37242081 | None:intergenic |
| CAACACGACGCCACAGACTG+TGG | 0.612830 | 3.3:-37246747 | None:intergenic |
| CGACGCCACAGACTGTGGAT+GGG | 0.614791 | 3.3:-37246742 | None:intergenic |
| CCCTTCAGATATCTTCATTG+GGG | 0.615934 | 3.3:-37245657 | None:intergenic |
| CCAGAATCGTTACTACATGA+AGG | 0.617304 | 3.3:-37244907 | None:intergenic |
| ATGACTCTTCGGAAGGAAGT+GGG | 0.617710 | 3.3:+37245486 | MS.gene019180:CDS |
| TGCTTTCCGAATTTCAGTAG+GGG | 0.618402 | 3.3:-37244863 | None:intergenic |
| AGGATACTATCATCGCTCAA+AGG | 0.620789 | 3.3:+37246246 | MS.gene019180:CDS |
| CCCGCAAAACTCCTGTCGAT+AGG | 0.624406 | 3.3:+37245963 | MS.gene019180:CDS |
| TTCATCCCATCCACAGTCTG+TGG | 0.626021 | 3.3:+37246737 | MS.gene019180:CDS |
| AGAAGACAAGCCTTCTTCCA+CGG | 0.626278 | 3.3:-37245873 | None:intergenic |
| CCCCAATGAAGATATCTGAA+GGG | 0.632021 | 3.3:+37245657 | MS.gene019180:CDS |
| GAATATCATGACTCTTCGGA+AGG | 0.632054 | 3.3:+37245479 | MS.gene019180:CDS |
| CTTTGTAAAGCAGGATGATG+TGG | 0.633113 | 3.3:+37243578 | MS.gene019180:intron |
| TGCTGCACATTGGATTGAAG+AGG | 0.634738 | 3.3:+37246003 | MS.gene019180:CDS |
| ACACAAACTGGGACTTAACA+GGG | 0.635382 | 3.3:-37245703 | None:intergenic |
| CAGCGGCGGATTTAGCGTGG+TGG | 0.635935 | 3.3:-37242044 | None:intergenic |
| TGTGAGTCATCGGCTTATGG+TGG | 0.636034 | 3.3:+37245599 | MS.gene019180:CDS |
| TTAATAACCTGCTAGGTGTG+TGG | 0.641765 | 3.3:-37245059 | None:intergenic |
| GTTGGAGAAGGCATTATCTG+AGG | 0.647231 | 3.3:+37246226 | MS.gene019180:CDS |
| ATGGGACTGAAATGAATAAG+GGG | 0.654668 | 3.3:+37245531 | MS.gene019180:CDS |
| GTTATTTGGATACACAAACT+GGG | 0.662575 | 3.3:-37245714 | None:intergenic |
| AGATAAAAGTGAATCTACCG+TGG | 0.669633 | 3.3:+37245856 | MS.gene019180:CDS |
| TCTTAGAGACATCCTCACCT+AGG | 0.675023 | 3.3:-37245739 | None:intergenic |
| TGATAGGCAGCTTAAAGACG+AGG | 0.694138 | 3.3:+37243807 | MS.gene019180:CDS |
| GGACTGAAATGAATAAGGGG+AGG | 0.697836 | 3.3:+37245534 | MS.gene019180:CDS |
| GTGGTGCCGAGACGGCACGG+CGG | 0.818841 | 3.3:-37242073 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGTTAAATAGGAA+TGG | + | chr3.3:37242390-37242409 | MS.gene019180:intron | 15.0% |
| !! | AAAAATTGTTAAATAGGAAT+GGG | + | chr3.3:37242391-37242410 | MS.gene019180:intron | 15.0% |
| !! | AAACTTAATTCAATAATCAT+AGG | - | chr3.3:37242240-37242259 | None:intergenic | 15.0% |
| !! | TACAAAAAATAAACAAGAAA+CGG | - | chr3.3:37242137-37242156 | None:intergenic | 15.0% |
| !! | TGAAAAGGTTATATTTAATA+TGG | - | chr3.3:37245400-37245419 | None:intergenic | 15.0% |
| !!! | AAAGTATTTAATAGTTTTCA+TGG | + | chr3.3:37243381-37243400 | MS.gene019180:intron | 15.0% |
| !!! | AAGTATTTAATAGTTTTCAT+GGG | + | chr3.3:37243382-37243401 | MS.gene019180:intron | 15.0% |
| !!! | ATTTACTGAAATTTTAGTTT+TGG | + | chr3.3:37242980-37242999 | MS.gene019180:intron | 15.0% |
| !!! | GATTAATTTTATCGATTTAA+AGG | + | chr3.3:37242488-37242507 | MS.gene019180:intron | 15.0% |
| !!! | TAGTGTTTGAAATTTTATTT+AGG | + | chr3.3:37243217-37243236 | MS.gene019180:intron | 15.0% |
| !!! | TTTTAGGTTTTTTTTTTTGT+TGG | + | chr3.3:37242736-37242755 | MS.gene019180:intron | 15.0% |
| !! | AAAAAAAATTAAGCTGGATT+TGG | + | chr3.3:37242657-37242676 | MS.gene019180:intron | 20.0% |
| !! | AAAGAAATTAACTACTGAAA+AGG | - | chr3.3:37245415-37245434 | None:intergenic | 20.0% |
| !! | AATAGACAAATGACTTAAAA+AGG | - | chr3.3:37244742-37244761 | None:intergenic | 20.0% |
| !! | ATGAAATTGTGAAATGATAA+TGG | + | chr3.3:37242514-37242533 | MS.gene019180:intron | 20.0% |
| !! | CTTCAAAAAAAAAATTAAGC+TGG | + | chr3.3:37242651-37242670 | MS.gene019180:intron | 20.0% |
| !! | TAGCAAAATAAATTTACCTT+CGG | - | chr3.3:37243637-37243656 | None:intergenic | 20.0% |
| !! | TGTGGAAAAAATTGTTAAAT+AGG | + | chr3.3:37242385-37242404 | MS.gene019180:intron | 20.0% |
| !!! | AAAATTGGTGTTTTAGAAAA+TGG | + | chr3.3:37245289-37245308 | MS.gene019180:intron | 20.0% |
| !!! | AAATGTTAGTTTAATTAAGC+TGG | + | chr3.3:37242434-37242453 | MS.gene019180:intron | 20.0% |
| !!! | AATATCGTTTTAACTTTCAA+AGG | - | chr3.3:37246315-37246334 | None:intergenic | 20.0% |
| !!! | CTTTAACCTTTTTTTTTGAA+AGG | + | chr3.3:37245083-37245102 | MS.gene019180:intron | 20.0% |
| !!! | GAAATTTGTTTATGAAATGA+TGG | + | chr3.3:37242761-37242780 | MS.gene019180:intron | 20.0% |
| !!! | TAGGTTTGTTATTGATTTAA+AGG | + | chr3.3:37242934-37242953 | MS.gene019180:intron | 20.0% |
| !!! | TCTCTTTACTTTTTTAATGA+AGG | + | chr3.3:37244399-37244418 | MS.gene019180:intron | 20.0% |
| !!! | TTAAGTTTGTTTACATGATT+TGG | + | chr3.3:37244790-37244809 | MS.gene019180:intron | 20.0% |
| !!! | TTCCCTTTTAGATTTTTTAA+GGG | + | chr3.3:37245332-37245351 | MS.gene019180:intron | 20.0% |
| !!! | TTTAGATAATTGAGTTTTTG+AGG | - | chr3.3:37244557-37244576 | None:intergenic | 20.0% |
| !!! | TTTCCCTTTTAGATTTTTTA+AGG | + | chr3.3:37245331-37245350 | MS.gene019180:intron | 20.0% |
| !!! | TTTTATGAATTTGTTGATTG+CGG | + | chr3.3:37242697-37242716 | MS.gene019180:intron | 20.0% |
| !!! | TTTTTTGAAGAACCTAAATT+CGG | - | chr3.3:37242641-37242660 | None:intergenic | 20.0% |
| ! | AATGTTACCGTTTATGTTTA+TGG | + | chr3.3:37244171-37244190 | MS.gene019180:intron | 25.0% |
| ! | AGATTGCCTTTCAAAAAAAA+AGG | - | chr3.3:37245092-37245111 | None:intergenic | 25.0% |
| ! | AGGATTATGAAATGTAATGA+TGG | + | chr3.3:37242954-37242973 | MS.gene019180:intron | 25.0% |
| ! | AGTTTAATTAAGCTGGAATT+TGG | + | chr3.3:37242547-37242566 | MS.gene019180:intron | 25.0% |
| ! | ATGATGAATTTGTAGATTTC+AGG | + | chr3.3:37243078-37243097 | MS.gene019180:intron | 25.0% |
| ! | ATGCCCTTAAAAAATCTAAA+AGG | - | chr3.3:37245338-37245357 | None:intergenic | 25.0% |
| ! | CAAAAAACAATGTGAAGAAT+GGG | + | chr3.3:37245014-37245033 | MS.gene019180:CDS | 25.0% |
| ! | GAAAACAATCAGCATTAATT+AGG | - | chr3.3:37246163-37246182 | None:intergenic | 25.0% |
| ! | GAAAGATAAAAAATAGCTTC+AGG | - | chr3.3:37244075-37244094 | None:intergenic | 25.0% |
| ! | GACATACTATATAGATATAC+AGG | - | chr3.3:37244481-37244500 | None:intergenic | 25.0% |
| ! | GATTATGAGTTACATTACAT+TGG | - | chr3.3:37242106-37242125 | None:intergenic | 25.0% |
| ! | GTTTAATTAAGCTGGAATTT+GGG | + | chr3.3:37242548-37242567 | MS.gene019180:intron | 25.0% |
| ! | TAATGAAGGTAGAAATTATC+TGG | + | chr3.3:37244413-37244432 | MS.gene019180:intron | 25.0% |
| ! | TCATACTTCTTTGTATTTGT+TGG | - | chr3.3:37246086-37246105 | None:intergenic | 25.0% |
| ! | TGCCCTTAAAAAATCTAAAA+GGG | - | chr3.3:37245337-37245356 | None:intergenic | 25.0% |
| ! | TGGTAAATTGCTTATGTATA+TGG | - | chr3.3:37246483-37246502 | None:intergenic | 25.0% |
| ! | TTAAAGATTAATAACCTGCT+AGG | - | chr3.3:37245069-37245088 | None:intergenic | 25.0% |
| ! | TTACAGATAAATGCACAATT+TGG | + | chr3.3:37244351-37244370 | MS.gene019180:intron | 25.0% |
| !! | AATTCCAAGAATTTTTGTTG+TGG | + | chr3.3:37242367-37242386 | MS.gene019180:intron | 25.0% |
| !! | CTCAGTAATGTACTAATTTT+GGG | + | chr3.3:37243709-37243728 | MS.gene019180:intron | 25.0% |
| !! | TCAGTAATGTACTAATTTTG+GGG | + | chr3.3:37243710-37243729 | MS.gene019180:intron | 25.0% |
| !! | TCTCAGTAATGTACTAATTT+TGG | + | chr3.3:37243708-37243727 | MS.gene019180:intron | 25.0% |
| !! | TGCTTTAACTTAGTTAATGT+AGG | + | chr3.3:37244232-37244251 | MS.gene019180:intron | 25.0% |
| !! | TTGTATTTGTTGGTTGAATT+TGG | - | chr3.3:37246076-37246095 | None:intergenic | 25.0% |
| !! | TTTTCCACAACAAAAATTCT+TGG | - | chr3.3:37242374-37242393 | None:intergenic | 25.0% |
| !!! | AATGGATTATGAAATGATGA+AGG | + | chr3.3:37243153-37243172 | MS.gene019180:intron | 25.0% |
| !!! | AATTAATGCTGATTGTTTTC+AGG | + | chr3.3:37246163-37246182 | MS.gene019180:intron | 25.0% |
| !!! | CATTCTTCACATTGTTTTTT+GGG | - | chr3.3:37245015-37245034 | None:intergenic | 25.0% |
| !!! | CTTTTACAGTTTTGATGTTA+TGG | + | chr3.3:37243683-37243702 | MS.gene019180:intron | 25.0% |
| !!! | GGGTTTAAATTTTGAAAAGA+GGG | + | chr3.3:37243730-37243749 | MS.gene019180:intron | 25.0% |
| !!! | GTTCTAGTTACTGAAATTTT+AGG | + | chr3.3:37243345-37243364 | MS.gene019180:intron | 25.0% |
| !!! | GTTCTGGTTTTTGATATTTT+AGG | + | chr3.3:37242720-37242739 | MS.gene019180:intron | 25.0% |
| !!! | TGTCTTTTTGATTTGTGATT+TGG | + | chr3.3:37246632-37246651 | MS.gene019180:intron | 25.0% |
| !!! | TTTATGAATTTGTTGATTGC+GGG | + | chr3.3:37242698-37242717 | MS.gene019180:intron | 25.0% |
| !!! | TTTGGATTTTTTGTGTGTTT+AGG | + | chr3.3:37242915-37242934 | MS.gene019180:intron | 25.0% |
| !!! | TTTTATTTAGGAGCTTTGTT+TGG | + | chr3.3:37243229-37243248 | MS.gene019180:intron | 25.0% |
| !!! | TTTTTAAGGGCATATCTTAT+GGG | + | chr3.3:37245345-37245364 | MS.gene019180:intron | 25.0% |
| !!! | TTTTTTAAGGGCATATCTTA+TGG | + | chr3.3:37245344-37245363 | MS.gene019180:intron | 25.0% |
| AAATTCATCATCTCAAGAAG+GGG | - | chr3.3:37243314-37243333 | None:intergenic | 30.0% | |
| AACAACCACACAATCAATTT+CGG | + | chr3.3:37245156-37245175 | MS.gene019180:intron | 30.0% | |
| AAGACAATGTGCATTGTAAT+GGG | + | chr3.3:37243755-37243774 | MS.gene019180:CDS | 30.0% | |
| AAGAGATTGCAGTTAAGTTA+TGG | - | chr3.3:37244385-37244404 | None:intergenic | 30.0% | |
| AATGTGTTCCTCTTCAAAAT+TGG | + | chr3.3:37245274-37245293 | MS.gene019180:intron | 30.0% | |
| ACAAATTCATCATCTCAAGA+AGG | - | chr3.3:37243316-37243335 | None:intergenic | 30.0% | |
| AGAAACCTGTATGATTTAGT+GGG | - | chr3.3:37246604-37246623 | None:intergenic | 30.0% | |
| AGACTTCTAATTCTTTCACA+TGG | - | chr3.3:37246126-37246145 | None:intergenic | 30.0% | |
| AGGAATTCAACGATACATAA+AGG | - | chr3.3:37246407-37246426 | None:intergenic | 30.0% | |
| AGTATCACATTCAAAACGTA+CGG | - | chr3.3:37245567-37245586 | None:intergenic | 30.0% | |
| ATACAATGTAGTGAGTATCA+AGG | - | chr3.3:37244298-37244317 | None:intergenic | 30.0% | |
| CAAATTCATCATCTCAAGAA+GGG | - | chr3.3:37243315-37243334 | None:intergenic | 30.0% | |
| CCAAAAAACAATGTGAAGAA+TGG | + | chr3.3:37245013-37245032 | MS.gene019180:CDS | 30.0% | |
| CTGTCTACCATAAACATAAA+CGG | - | chr3.3:37244181-37244200 | None:intergenic | 30.0% | |
| GAGAAATTGTGAAATGAGAA+TGG | + | chr3.3:37243002-37243021 | MS.gene019180:intron | 30.0% | |
| GTACATTACATGCATTAAAC+AGG | - | chr3.3:37245119-37245138 | None:intergenic | 30.0% | |
| GTTATTTGGATACACAAACT+GGG | - | chr3.3:37245717-37245736 | None:intergenic | 30.0% | |
| TAAATCGATAACAAGCTATC+AGG | - | chr3.3:37242342-37242361 | None:intergenic | 30.0% | |
| TAAGCCTTTCTTATACAAGA+TGG | - | chr3.3:37245219-37245238 | None:intergenic | 30.0% | |
| TCAATTCAATACTTGAGAGT+TGG | - | chr3.3:37244106-37244125 | None:intergenic | 30.0% | |
| TCAGAAACAAAGTAGACAAA+CGG | - | chr3.3:37243614-37243633 | None:intergenic | 30.0% | |
| TCATTCTCATCAAAAGCAAT+TGG | - | chr3.3:37246684-37246703 | None:intergenic | 30.0% | |
| TCTTGTATAAGAAAGGCTTA+AGG | + | chr3.3:37245219-37245238 | MS.gene019180:intron | 30.0% | |
| TGTAATGTGTATTCGCAATT+CGG | + | chr3.3:37243921-37243940 | MS.gene019180:intron | 30.0% | |
| TGTTAAATAGGAATGGGAAT+GGG | + | chr3.3:37242397-37242416 | MS.gene019180:intron | 30.0% | |
| TTATTTACTATTAGCGCGAT+GGG | + | chr3.3:37245190-37245209 | MS.gene019180:intron | 30.0% | |
| TTGTTAAATAGGAATGGGAA+TGG | + | chr3.3:37242396-37242415 | MS.gene019180:intron | 30.0% | |
| ! | AGAACTCTACTTGATAGTAT+TGG | + | chr3.3:37244003-37244022 | MS.gene019180:intron | 30.0% |
| ! | ATACAAAGAAGTATGATCCT+TGG | + | chr3.3:37246090-37246109 | MS.gene019180:intron | 30.0% |
| ! | CTTTAGTTTCTGTTTAAGTG+AGG | + | chr3.3:37244141-37244160 | MS.gene019180:intron | 30.0% |
| ! | TAAAATAGCTGATGTTTTGC+TGG | + | chr3.3:37244580-37244599 | MS.gene019180:intron | 30.0% |
| ! | TGTTATTTGGATACACAAAC+TGG | - | chr3.3:37245718-37245737 | None:intergenic | 30.0% |
| ! | TTGGTAGCTAAAATGTTGAA+TGG | + | chr3.3:37243248-37243267 | MS.gene019180:intron | 30.0% |
| !! | AATTTGTAGATTTCAGGTTC+TGG | + | chr3.3:37243084-37243103 | MS.gene019180:intron | 30.0% |
| !! | ATGATTTGGTAAACATTTGC+AGG | + | chr3.3:37244804-37244823 | MS.gene019180:intron | 30.0% |
| !! | CATTGTATTTTTCGATCTCA+AGG | + | chr3.3:37244310-37244329 | MS.gene019180:intron | 30.0% |
| !! | CTAAAACACCAATTTTGAAG+AGG | - | chr3.3:37245285-37245304 | None:intergenic | 30.0% |
| !! | GGGGTTTAAATTTTGAAAAG+AGG | + | chr3.3:37243729-37243748 | MS.gene019180:intron | 30.0% |
| !! | GTGTAGCTTTGTTATTGAAA+TGG | + | chr3.3:37243135-37243154 | MS.gene019180:intron | 30.0% |
| !! | TTGTAATGGGAGAAATTTTG+AGG | + | chr3.3:37243768-37243787 | MS.gene019180:CDS | 30.0% |
| !! | TTTTAAGGGCATATCTTATG+GGG | + | chr3.3:37245346-37245365 | MS.gene019180:intron | 30.0% |
| !!! | CCATTCTTCACATTGTTTTT+TGG | - | chr3.3:37245016-37245035 | None:intergenic | 30.0% |
| !!! | GACTTAAAAAGGTGTTTTTG+AGG | - | chr3.3:37244731-37244750 | None:intergenic | 30.0% |
| !!! | TTCTGGTTTCTGAAGTTTTA+TGG | + | chr3.3:37243101-37243120 | MS.gene019180:intron | 30.0% |
| !!! | TTTTGACTTTTTGATGTGAC+TGG | + | chr3.3:37243543-37243562 | MS.gene019180:intron | 30.0% |
| AATTAAGCTGGAATTTGGGT+TGG | + | chr3.3:37242552-37242571 | MS.gene019180:intron | 35.0% | |
| AGAAATTATCTGGTTGTCCA+TGG | + | chr3.3:37244423-37244442 | MS.gene019180:intron | 35.0% | |
| AGAAGTTTGTACTTCTGATG+CGG | + | chr3.3:37246336-37246355 | MS.gene019180:intron | 35.0% | |
| AGATAAAAGTGAATCTACCG+TGG | + | chr3.3:37245856-37245875 | MS.gene019180:CDS | 35.0% | |
| ATAGCTTCAGGTCATAATTC+TGG | - | chr3.3:37244063-37244082 | None:intergenic | 35.0% | |
| ATCCCTTCAGATATCTTCAT+TGG | - | chr3.3:37245662-37245681 | None:intergenic | 35.0% | |
| ATGCTTTCCGAATTTCAGTA+GGG | - | chr3.3:37244867-37244886 | None:intergenic | 35.0% | |
| ATGGGAATATCATGACTCTT+CGG | + | chr3.3:37245475-37245494 | MS.gene019180:CDS | 35.0% | |
| ATGGGACTGAAATGAATAAG+GGG | + | chr3.3:37245531-37245550 | MS.gene019180:CDS | 35.0% | |
| CAATGCACACAATACTCAAT+GGG | + | chr3.3:37245457-37245476 | MS.gene019180:CDS | 35.0% | |
| CTTATTCATTTCAGTCCCAT+CGG | - | chr3.3:37245531-37245550 | None:intergenic | 35.0% | |
| CTTATTTACTATTAGCGCGA+TGG | + | chr3.3:37245189-37245208 | MS.gene019180:intron | 35.0% | |
| GAAGACAATGTGCATTGTAA+TGG | + | chr3.3:37243754-37243773 | MS.gene019180:CDS | 35.0% | |
| GACACCATCTTGTATAAGAA+AGG | + | chr3.3:37245212-37245231 | MS.gene019180:intron | 35.0% | |
| GAGAAACCTGTATGATTTAG+TGG | - | chr3.3:37246605-37246624 | None:intergenic | 35.0% | |
| GAGAAGAAAGAAAATGGAGA+TGG | + | chr3.3:37245928-37245947 | MS.gene019180:CDS | 35.0% | |
| GATATAAGACTAAGACACTG+AGG | + | chr3.3:37243957-37243976 | MS.gene019180:intron | 35.0% | |
| GATGGGACTGAAATGAATAA+GGG | + | chr3.3:37245530-37245549 | MS.gene019180:CDS | 35.0% | |
| GCAAAGTTTCTTAAAGCTTG+TGG | + | chr3.3:37244826-37244845 | MS.gene019180:CDS | 35.0% | |
| GCACTCAATACAAAAGTAAG+TGG | - | chr3.3:37246518-37246537 | None:intergenic | 35.0% | |
| GGTAAGTGTTATACTAACGA+TGG | - | chr3.3:37244260-37244279 | None:intergenic | 35.0% | |
| GTGAAATACTGAAATGTGAG+TGG | + | chr3.3:37242819-37242838 | MS.gene019180:intron | 35.0% | |
| GTTCACAGGAAAGATATTTG+CGG | + | chr3.3:37246654-37246673 | MS.gene019180:intron | 35.0% | |
| TATTTCATCCTGTGAGTCAT+CGG | + | chr3.3:37245589-37245608 | MS.gene019180:CDS | 35.0% | |
| TCCCTTCAGATATCTTCATT+GGG | - | chr3.3:37245661-37245680 | None:intergenic | 35.0% | |
| TTCATGCATGTTTAGCTGTT+TGG | + | chr3.3:37243881-37243900 | MS.gene019180:intron | 35.0% | |
| TTGAAGAACCTAAATTCGGA+CGG | - | chr3.3:37242637-37242656 | None:intergenic | 35.0% | |
| TTGAATGGTTGGACATTAGT+TGG | - | chr3.3:37244982-37245001 | None:intergenic | 35.0% | |
| ! | GAAGAGGAACACATTTTCTT+AGG | - | chr3.3:37245269-37245288 | None:intergenic | 35.0% |
| ! | GAATTTGCTCTTTGTAAAGC+AGG | + | chr3.3:37243569-37243588 | MS.gene019180:intron | 35.0% |
| ! | GTAAGTGGTCTTTTGTCAAA+TGG | - | chr3.3:37246503-37246522 | None:intergenic | 35.0% |
| ! | TACTGAAATTCGGAAAGCAT+CGG | + | chr3.3:37244867-37244886 | MS.gene019180:CDS | 35.0% |
| !! | AATGGGAGAAATTTTGAGGA+GGG | + | chr3.3:37243772-37243791 | MS.gene019180:CDS | 35.0% |
| !! | ACATTACATTGGCTTTGTTG+TGG | - | chr3.3:37242095-37242114 | None:intergenic | 35.0% |
| !! | ACGGTAGATTCACTTTTATC+TGG | - | chr3.3:37245857-37245876 | None:intergenic | 35.0% |
| !! | AGTCTCGCGATTTTGATAAT+TGG | + | chr3.3:37246577-37246596 | MS.gene019180:intron | 35.0% |
| !! | ATTTTTCGATCTCAAGGTTC+TGG | + | chr3.3:37244316-37244335 | MS.gene019180:intron | 35.0% |
| !! | CAGTGTCTTAGTCTTATATC+AGG | - | chr3.3:37243957-37243976 | None:intergenic | 35.0% |
| !! | CTTCTGGTTGCTGAAATTTT+TGG | + | chr3.3:37243437-37243456 | MS.gene019180:intron | 35.0% |
| !! | TAATGGGAGAAATTTTGAGG+AGG | + | chr3.3:37243771-37243790 | MS.gene019180:CDS | 35.0% |
| !! | TGATTTGTGATTTGGTTCAC+AGG | + | chr3.3:37246640-37246659 | MS.gene019180:intron | 35.0% |
| !!! | GTGTTCGTTGTTGTTGTTTT+TGG | + | chr3.3:37242897-37242916 | MS.gene019180:intron | 35.0% |
| !!! | TCACATTGTTTTTTGGGAGT+TGG | - | chr3.3:37245009-37245028 | None:intergenic | 35.0% |
| AACCACACAATCAATTTCGG+TGG | + | chr3.3:37245159-37245178 | MS.gene019180:intron | 40.0% | |
| AATAGGAATGGGAATGGGAA+TGG | + | chr3.3:37242402-37242421 | MS.gene019180:intron | 40.0% | |
| ACACAAACTGGGACTTAACA+GGG | - | chr3.3:37245706-37245725 | None:intergenic | 40.0% | |
| ACCCCAATGAAGATATCTGA+AGG | + | chr3.3:37245656-37245675 | MS.gene019180:CDS | 40.0% | |
| AGAAGCCAAGAACGAAACTT+TGG | - | chr3.3:37244937-37244956 | None:intergenic | 40.0% | |
| AGGATACTATCATCGCTCAA+AGG | + | chr3.3:37246246-37246265 | MS.gene019180:CDS | 40.0% | |
| ATACACCACAAATCTTAGCC+AGG | - | chr3.3:37244455-37244474 | None:intergenic | 40.0% | |
| ATCCACCGAAATTGATTGTG+TGG | - | chr3.3:37245164-37245183 | None:intergenic | 40.0% | |
| ATCTTCATTGGGGTAGGATT+TGG | - | chr3.3:37245650-37245669 | None:intergenic | 40.0% | |
| ATGCATGTTTAGCTGTTTGG+AGG | + | chr3.3:37243884-37243903 | MS.gene019180:intron | 40.0% | |
| CAACGAACACAAGAACAAAG+AGG | - | chr3.3:37242887-37242906 | None:intergenic | 40.0% | |
| CAAGTACCCCTACTGAAATT+CGG | + | chr3.3:37244857-37244876 | MS.gene019180:CDS | 40.0% | |
| CACATGGAAAATAGCTACCA+AGG | - | chr3.3:37246110-37246129 | None:intergenic | 40.0% | |
| CACTGACACTTCTTGGATTA+GGG | + | chr3.3:37242177-37242196 | MS.gene019180:intron | 40.0% | |
| CCAATGCACACAATACTCAA+TGG | + | chr3.3:37245456-37245475 | MS.gene019180:CDS | 40.0% | |
| CCAGAATCGTTACTACATGA+AGG | - | chr3.3:37244910-37244929 | None:intergenic | 40.0% | |
| CCCCAATGAAGATATCTGAA+GGG | + | chr3.3:37245657-37245676 | MS.gene019180:CDS | 40.0% | |
| CCCTTCAGATATCTTCATTG+GGG | - | chr3.3:37245660-37245679 | None:intergenic | 40.0% | |
| CCTTCATGTAGTAACGATTC+TGG | + | chr3.3:37244907-37244926 | MS.gene019180:CDS | 40.0% | |
| CGAAGATGTCTCATTGAGAA+TGG | + | chr3.3:37244037-37244056 | MS.gene019180:intron | 40.0% | |
| CGATGGGACTGAAATGAATA+AGG | + | chr3.3:37245529-37245548 | MS.gene019180:CDS | 40.0% | |
| CTTTGTAAAGCAGGATGATG+TGG | + | chr3.3:37243578-37243597 | MS.gene019180:intron | 40.0% | |
| GAACACGAAAGCAAGTGAAA+AGG | - | chr3.3:37242011-37242030 | None:intergenic | 40.0% | |
| GAATATCATGACTCTTCGGA+AGG | + | chr3.3:37245479-37245498 | MS.gene019180:CDS | 40.0% | |
| GATGCTTTCCGAATTTCAGT+AGG | - | chr3.3:37244868-37244887 | None:intergenic | 40.0% | |
| GCAAACAACAGTGCTTTCAT+AGG | - | chr3.3:37246276-37246295 | None:intergenic | 40.0% | |
| GGAGGAGAGAAGAAAGAAAA+TGG | + | chr3.3:37245922-37245941 | MS.gene019180:CDS | 40.0% | |
| GTCTTATATCAGGAGCGAAA+TGG | - | chr3.3:37243947-37243966 | None:intergenic | 40.0% | |
| GTGTATCCAAATAACAGCCT+AGG | + | chr3.3:37245722-37245741 | MS.gene019180:CDS | 40.0% | |
| GTTGAGATGATCGCTTCATT+CGG | + | chr3.3:37243270-37243289 | MS.gene019180:intron | 40.0% | |
| TACAAGCATATGCATGTCCT+GGG | + | chr3.3:37244508-37244527 | MS.gene019180:intron | 40.0% | |
| TACACAAACTGGGACTTAAC+AGG | - | chr3.3:37245707-37245726 | None:intergenic | 40.0% | |
| TCAAGGCTTTCTTAGTATCG+TGG | - | chr3.3:37244281-37244300 | None:intergenic | 40.0% | |
| TCAGATATCTTCATTGGGGT+AGG | - | chr3.3:37245656-37245675 | None:intergenic | 40.0% | |
| TCCTCCAAAATAACAGATGC+AGG | - | chr3.3:37245908-37245927 | None:intergenic | 40.0% | |
| TGAAGAACCTAAATTCGGAC+GGG | - | chr3.3:37242636-37242655 | None:intergenic | 40.0% | |
| TGCTTTCCGAATTTCAGTAG+GGG | - | chr3.3:37244866-37244885 | None:intergenic | 40.0% | |
| TTAACAGGGTAAACAGTTCC+AGG | - | chr3.3:37245692-37245711 | None:intergenic | 40.0% | |
| TTAATAACCTGCTAGGTGTG+TGG | - | chr3.3:37245062-37245081 | None:intergenic | 40.0% | |
| TTCAACGTCATGCTAAACTC+AGG | - | chr3.3:37246427-37246446 | None:intergenic | 40.0% | |
| TTCTGAGTATGTTCTGCTTC+TGG | + | chr3.3:37243421-37243440 | MS.gene019180:intron | 40.0% | |
| TTGGTCCCACTAAATCATAC+AGG | + | chr3.3:37246596-37246615 | MS.gene019180:intron | 40.0% | |
| ! | AATAGCTGATGTTTTGCTGG+TGG | + | chr3.3:37244583-37244602 | MS.gene019180:intron | 40.0% |
| ! | ACTGACACTTCTTGGATTAG+GGG | + | chr3.3:37242178-37242197 | MS.gene019180:intron | 40.0% |
| ! | CATTGAAGAAGTAAGCACTG+TGG | - | chr3.3:37244204-37244223 | None:intergenic | 40.0% |
| ! | CCATTGAGTATTGTGTGCAT+TGG | - | chr3.3:37245459-37245478 | None:intergenic | 40.0% |
| ! | CTCTAAGAGCAAGATACTTG+AGG | + | chr3.3:37245754-37245773 | MS.gene019180:CDS | 40.0% |
| !! | AATTTGTTGATTGCGGGTTC+TGG | + | chr3.3:37242704-37242723 | MS.gene019180:intron | 40.0% |
| !! | GAAGCCTGCATCTGTTATTT+TGG | + | chr3.3:37245901-37245920 | MS.gene019180:CDS | 40.0% |
| !! | TATGAAGCACTGACACTTCT+TGG | + | chr3.3:37242170-37242189 | MS.gene019180:intron | 40.0% |
| !! | TCTACTTTGTTTCTGACCGA+AGG | + | chr3.3:37243618-37243637 | MS.gene019180:CDS | 40.0% |
| !!! | CATTGTTTTTTGGGAGTTGG+CGG | - | chr3.3:37245006-37245025 | None:intergenic | 40.0% |
| AGAAGACAAGCCTTCTTCCA+CGG | - | chr3.3:37245876-37245895 | None:intergenic | 45.0% | |
| AGCCAAGAACGAAACTTTGG+AGG | - | chr3.3:37244934-37244953 | None:intergenic | 45.0% | |
| AGGGATCACAGAGTGATGAT+AGG | + | chr3.3:37243791-37243810 | MS.gene019180:CDS | 45.0% | |
| AGTGAATCTACCGTGGAAGA+AGG | + | chr3.3:37245863-37245882 | MS.gene019180:CDS | 45.0% | |
| ATCTTCCTTGAATCTTGCGC+AGG | - | chr3.3:37245794-37245813 | None:intergenic | 45.0% | |
| ATGACTCTTCGGAAGGAAGT+GGG | + | chr3.3:37245486-37245505 | MS.gene019180:CDS | 45.0% | |
| ATGTTCCTGCGCAAGATTCA+AGG | + | chr3.3:37245786-37245805 | MS.gene019180:CDS | 45.0% | |
| CAAAGTCACAGACACTGACA+CGG | - | chr3.3:37242319-37242338 | None:intergenic | 45.0% | |
| CTACAAGCATATGCATGTCC+TGG | + | chr3.3:37244507-37244526 | MS.gene019180:intron | 45.0% | |
| GAAGAACCTAAATTCGGACG+GGG | - | chr3.3:37242635-37242654 | None:intergenic | 45.0% | |
| GAATGGATCCTAAGACCTTG+AGG | - | chr3.3:37242611-37242630 | None:intergenic | 45.0% | |
| GAGCAAGATACTTGAGGAAG+AGG | + | chr3.3:37245760-37245779 | MS.gene019180:CDS | 45.0% | |
| GCATTCCTGGCTAAGATTTG+TGG | + | chr3.3:37244447-37244466 | MS.gene019180:intron | 45.0% | |
| GGACTGAAATGAATAAGGGG+AGG | + | chr3.3:37245534-37245553 | MS.gene019180:CDS | 45.0% | |
| GTCCTCCAAAGTTTCGTTCT+TGG | + | chr3.3:37244929-37244948 | MS.gene019180:CDS | 45.0% | |
| TCCAAATAACAGCCTAGGTG+AGG | + | chr3.3:37245727-37245746 | MS.gene019180:CDS | 45.0% | |
| TCCTCACCTAGGCTGTTATT+TGG | - | chr3.3:37245731-37245750 | None:intergenic | 45.0% | |
| TCTTAGAGACATCCTCACCT+AGG | - | chr3.3:37245742-37245761 | None:intergenic | 45.0% | |
| TGATAGGCAGCTTAAAGACG+AGG | + | chr3.3:37243807-37243826 | MS.gene019180:CDS | 45.0% | |
| TGCTGCACATTGGATTGAAG+AGG | + | chr3.3:37246003-37246022 | MS.gene019180:CDS | 45.0% | |
| TGGAAGAAGGCTTGTCTTCT+TGG | + | chr3.3:37245876-37245895 | MS.gene019180:CDS | 45.0% | |
| TTCATTTCAGTCCCATCGGT+CGG | - | chr3.3:37245527-37245546 | None:intergenic | 45.0% | |
| TTCTCCAACCTCTCTTCGAA+CGG | - | chr3.3:37246215-37246234 | None:intergenic | 45.0% | |
| ! | ATCTCAAGGTTCTGGCAGTA+GGG | + | chr3.3:37244324-37244343 | MS.gene019180:intron | 45.0% |
| ! | GCACTGACACTTCTTGGATT+AGG | + | chr3.3:37242176-37242195 | MS.gene019180:intron | 45.0% |
| !! | GGAATTTGGGTTGGTGGTAT+TGG | + | chr3.3:37242561-37242580 | MS.gene019180:intron | 45.0% |
| !! | GTTGGAGAAGGCATTATCTG+AGG | + | chr3.3:37246226-37246245 | MS.gene019180:CDS | 45.0% |
| !! | TAAGCTGGAATTTGGGTTGG+TGG | + | chr3.3:37242555-37242574 | MS.gene019180:intron | 45.0% |
| !! | TTCAGTAGGGGTACTTGCTA+TGG | - | chr3.3:37244854-37244873 | None:intergenic | 45.0% |
| !!! | GCCTGCATCTGTTATTTTGG+AGG | + | chr3.3:37245904-37245923 | MS.gene019180:CDS | 45.0% |
| AAAAGTTTGTGAGCCAGCCC+AGG | - | chr3.3:37244528-37244547 | None:intergenic | 50.0% | |
| ACCATAAGCCGATGACTCAC+AGG | - | chr3.3:37245600-37245619 | None:intergenic | 50.0% | |
| CATGACTCTTCGGAAGGAAG+TGG | + | chr3.3:37245485-37245504 | MS.gene019180:CDS | 50.0% | |
| CATTCTCCCCGTCCGAATTT+AGG | + | chr3.3:37242626-37242645 | MS.gene019180:intron | 50.0% | |
| CTAAATTCGGACGGGGAGAA+TGG | - | chr3.3:37242628-37242647 | None:intergenic | 50.0% | |
| CTGTCGATAGGCCCATCATT+GGG | + | chr3.3:37245975-37245994 | MS.gene019180:CDS | 50.0% | |
| GTTCGAAGAGAGGTTGGAGA+AGG | + | chr3.3:37246214-37246233 | MS.gene019180:CDS | 50.0% | |
| TAGCATGCCAGCTCACTTTC+TGG | - | chr3.3:37246190-37246209 | None:intergenic | 50.0% | |
| TCTGAAGGGATGCAAACTCC+TGG | + | chr3.3:37245671-37245690 | MS.gene019180:CDS | 50.0% | |
| TCTTAGCCAGGAATGCACCA+TGG | - | chr3.3:37244443-37244462 | None:intergenic | 50.0% | |
| TGGATCCTAAGACCTTGAGG+AGG | - | chr3.3:37242608-37242627 | None:intergenic | 50.0% | |
| TTCAGGACCAGAAAGTGAGC+TGG | + | chr3.3:37246180-37246199 | MS.gene019180:intron | 50.0% | |
| TTCATCCCATCCACAGTCTG+TGG | + | chr3.3:37246737-37246756 | MS.gene019180:CDS | 50.0% | |
| ! | CCTATCGACAGGAGTTTTGC+GGG | - | chr3.3:37245966-37245985 | None:intergenic | 50.0% |
| ! | GATCTCAAGGTTCTGGCAGT+AGG | + | chr3.3:37244323-37244342 | MS.gene019180:intron | 50.0% |
| ! | GCCTATCGACAGGAGTTTTG+CGG | - | chr3.3:37245967-37245986 | None:intergenic | 50.0% |
| ! | GCTGATGTTTTGCTGGTGGA+AGG | + | chr3.3:37244587-37244606 | MS.gene019180:intron | 50.0% |
| !! | AGTCATCGGCTTATGGTGGA+TGG | + | chr3.3:37245603-37245622 | MS.gene019180:CDS | 50.0% |
| !! | GAGTTGGCGGATTGAATGGT+TGG | - | chr3.3:37244993-37245012 | None:intergenic | 50.0% |
| !! | TCCTGTGAGTCATCGGCTTA+TGG | + | chr3.3:37245596-37245615 | MS.gene019180:CDS | 50.0% |
| !! | TGGGTTGGTGGTATTGGCTT+GGG | + | chr3.3:37242567-37242586 | MS.gene019180:intron | 50.0% |
| !! | TGTGAGTCATCGGCTTATGG+TGG | + | chr3.3:37245599-37245618 | MS.gene019180:CDS | 50.0% |
| !! | TTGGGAGTTGGCGGATTGAA+TGG | - | chr3.3:37244997-37245016 | None:intergenic | 50.0% |
| !! | TTGGGTTGGTGGTATTGGCT+TGG | + | chr3.3:37242566-37242585 | MS.gene019180:intron | 50.0% |
| ACACGGCACAGACACTGACA+CGG | - | chr3.3:37242302-37242321 | None:intergenic | 55.0% | |
| AGCATATGCATGTCCTGGGC+TGG | + | chr3.3:37244512-37244531 | MS.gene019180:intron | 55.0% | |
| ATGCTACGCCGTTCGAAGAG+AGG | + | chr3.3:37246204-37246223 | MS.gene019180:CDS | 55.0% | |
| ATGCTCCTCCTCCTAAGTGG+TGG | + | chr3.3:37246035-37246054 | MS.gene019180:CDS | 55.0% | |
| CCATTGCCATCCCACCACTT+AGG | - | chr3.3:37246049-37246068 | None:intergenic | 55.0% | |
| CCCGCAAAACTCCTGTCGAT+AGG | + | chr3.3:37245963-37245982 | MS.gene019180:CDS | 55.0% | |
| CCTGTCGATAGGCCCATCAT+TGG | + | chr3.3:37245974-37245993 | MS.gene019180:CDS | 55.0% | |
| CTGATGCTCCTCCTCCTAAG+TGG | + | chr3.3:37246032-37246051 | MS.gene019180:CDS | 55.0% | |
| GGAGCTATCATCCGACCGAT+GGG | + | chr3.3:37245513-37245532 | MS.gene019180:CDS | 55.0% | |
| GGTTGTCCATGGTGCATTCC+TGG | + | chr3.3:37244434-37244453 | MS.gene019180:intron | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3.3:37242600-37242619 | MS.gene019180:intron | 55.0% | |
| GTTCAGACCACACACCTAGC+AGG | + | chr3.3:37245052-37245071 | MS.gene019180:CDS | 55.0% | |
| TACGCCGTTCGAAGAGAGGT+TGG | + | chr3.3:37246208-37246227 | MS.gene019180:CDS | 55.0% | |
| TCTTCGGAAGGAAGTGGGCA+GGG | + | chr3.3:37245491-37245510 | MS.gene019180:CDS | 55.0% | |
| TGCTCCTCCTCCTAAGTGGT+GGG | + | chr3.3:37246036-37246055 | MS.gene019180:CDS | 55.0% | |
| TTGCCATCCCACCACTTAGG+AGG | - | chr3.3:37246046-37246065 | None:intergenic | 55.0% | |
| ! | CCTAAGTGGTGGGATGGCAA+TGG | + | chr3.3:37246046-37246065 | MS.gene019180:CDS | 55.0% |
| ! | GCTTTGTTGTGGTGCCGAGA+CGG | - | chr3.3:37242084-37242103 | None:intergenic | 55.0% |
| !! | CCAATGATGGGCCTATCGAC+AGG | - | chr3.3:37245977-37245996 | None:intergenic | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3.3:37242574-37242593 | MS.gene019180:intron | 55.0% |
| ACGACGCCACAGACTGTGGA+TGG | - | chr3.3:37246746-37246765 | None:intergenic | 60.0% | |
| CAACACGACGCCACAGACTG+TGG | - | chr3.3:37246750-37246769 | None:intergenic | 60.0% | |
| CAGTCTGTGGCGTCGTGTTG+AGG | + | chr3.3:37246750-37246769 | MS.gene019180:CDS | 60.0% | |
| CCATCCCACCACTTAGGAGG+AGG | - | chr3.3:37246043-37246062 | None:intergenic | 60.0% | |
| CGACGCCACAGACTGTGGAT+GGG | - | chr3.3:37246745-37246764 | None:intergenic | 60.0% | |
| CTCTTCGGAAGGAAGTGGGC+AGG | + | chr3.3:37245490-37245509 | MS.gene019180:CDS | 60.0% | |
| CTTCGGAAGGAAGTGGGCAG+GGG | + | chr3.3:37245492-37245511 | MS.gene019180:CDS | 60.0% | |
| GGGAGCTATCATCCGACCGA+TGG | + | chr3.3:37245512-37245531 | MS.gene019180:CDS | 60.0% | |
| ! | CCTCCTCCTAAGTGGTGGGA+TGG | + | chr3.3:37246040-37246059 | MS.gene019180:CDS | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr3.3:37242593-37242612 | MS.gene019180:intron | 60.0% |
| ! | TTGAGGAGGAGCACACTCCC+AGG | - | chr3.3:37242594-37242613 | None:intergenic | 60.0% |
| !! | GGTGGTATTGGCTTGGGACC+TGG | + | chr3.3:37242573-37242592 | MS.gene019180:intron | 60.0% |
| ! | AGGCAGCGGCGGATTTAGCG+TGG | - | chr3.3:37242050-37242069 | None:intergenic | 65.0% |
| ! | CAGCGGCGGATTTAGCGTGG+TGG | - | chr3.3:37242047-37242066 | None:intergenic | 65.0% |
| ! | GTTGTGGTGCCGAGACGGCA+CGG | - | chr3.3:37242079-37242098 | None:intergenic | 65.0% |
| ! | GTGGTGCCGAGACGGCACGG+CGG | - | chr3.3:37242076-37242095 | None:intergenic | 75.0% |
| ! | CCTCCGCCGCCGTGCCGTCT+CGG | + | chr3.3:37242067-37242086 | MS.gene019180:CDS | 80.0% |
| ! | GTGCCGAGACGGCACGGCGG+CGG | - | chr3.3:37242073-37242092 | None:intergenic | 80.0% |
| ! | CACGGCGGCGGAGGCAGCGG+CGG | - | chr3.3:37242061-37242080 | None:intergenic | 85.0% |
| ! | CCGAGACGGCACGGCGGCGG+AGG | - | chr3.3:37242070-37242089 | None:intergenic | 85.0% |
| ! | CGGCACGGCGGCGGAGGCAG+CGG | - | chr3.3:37242064-37242083 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 37242000 | 37246770 | 37242000 | ID=MS.gene019180 |
| chr3.3 | mRNA | 37242000 | 37246770 | 37242000 | ID=MS.gene019180.t1;Parent=MS.gene019180 |
| chr3.3 | exon | 37242000 | 37242107 | 37242000 | ID=MS.gene019180.t1.exon1;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37242000 | 37242107 | 37242000 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37243591 | 37243639 | 37243591 | ID=MS.gene019180.t1.exon2;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37243591 | 37243639 | 37243591 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37243749 | 37243828 | 37243749 | ID=MS.gene019180.t1.exon3;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37243749 | 37243828 | 37243749 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37244826 | 37245073 | 37244826 | ID=MS.gene019180.t1.exon4;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37244826 | 37245073 | 37244826 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37245448 | 37246099 | 37245448 | ID=MS.gene019180.t1.exon5;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37245448 | 37246099 | 37245448 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37246185 | 37246267 | 37246185 | ID=MS.gene019180.t1.exon6;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37246185 | 37246267 | 37246185 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| chr3.3 | exon | 37246662 | 37246770 | 37246662 | ID=MS.gene019180.t1.exon7;Parent=MS.gene019180.t1 |
| chr3.3 | CDS | 37246662 | 37246770 | 37246662 | ID=cds.MS.gene019180.t1;Parent=MS.gene019180.t1 |
| Gene Sequence |
| Protein sequence |
