Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22197.t1 | KEH33680.1 | 94 | 414 | 22 | 3 | 9 | 421 | 28 | 439 | 4.30E-219 | 770.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22197.t1 | F4IDQ5 | 39.7 | 446 | 197 | 15 | 20 | 420 | 62 | 480 | 8.7e-59 | 229.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22197.t1 | A0A072V681 | 94.0 | 414 | 22 | 3 | 9 | 421 | 28 | 439 | 3.1e-219 | 770.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052308 | MS.gene22197 | 0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene054593 | MS.gene22197 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene058128 | MS.gene22197 | 0.816759 | 4.69E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene22197 | 0.813291 | 2.76E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019180 | MS.gene22197 | PPI |
| MS.gene22197 | MS.gene038276 | PPI |
| MS.gene69498 | MS.gene22197 | PPI |
| MS.gene000509 | MS.gene22197 | PPI |
| MS.gene017059 | MS.gene22197 | PPI |
| MS.gene22197 | MS.gene47715 | PPI |
| MS.gene48029 | MS.gene22197 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22197.t1 | MTR_3g450760 | 93.961 | 414 | 22 | 3 | 9 | 421 | 28 | 439 | 0.0 | 786 |
| MS.gene22197.t1 | MTR_5g090900 | 47.196 | 428 | 178 | 7 | 16 | 401 | 52 | 473 | 1.24e-114 | 343 |
| MS.gene22197.t1 | MTR_1g069610 | 39.683 | 126 | 62 | 4 | 263 | 380 | 317 | 436 | 3.08e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22197.t1 | AT1G06660 | 39.013 | 446 | 200 | 14 | 20 | 420 | 62 | 480 | 1.24e-68 | 225 |
| MS.gene22197.t1 | AT2G30820 | 36.534 | 427 | 197 | 12 | 20 | 412 | 31 | 417 | 5.18e-53 | 182 |
| MS.gene22197.t1 | AT2G30820 | 36.534 | 427 | 197 | 12 | 20 | 412 | 31 | 417 | 5.18e-53 | 182 |
Find 113 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCACCTAGGCTGTTATT+TGG | 0.189762 | 3.4:-40686568 | None:intergenic |
| GTCCTCCAAAGTTTCGTTCT+TGG | 0.196344 | 3.4:+40685769 | MS.gene22197:CDS |
| GAAGCCTGCATCTGTTATTT+TGG | 0.212458 | 3.4:+40686741 | MS.gene22197:CDS |
| TAGCATGCCAGCTCACTTTC+TGG | 0.229927 | 3.4:-40687027 | None:intergenic |
| TTGTATTTGTTGGTTGAATT+TGG | 0.246872 | 3.4:-40686913 | None:intergenic |
| TGGAAGAAGGCTTGTCTTCT+TGG | 0.254792 | 3.4:+40686716 | MS.gene22197:CDS |
| CGATGGGACTGAAATGAATA+AGG | 0.261654 | 3.4:+40686369 | MS.gene22197:CDS |
| GGAGGAGAGAAGAAAGAAAA+TGG | 0.286742 | 3.4:+40686762 | MS.gene22197:CDS |
| ATCTTCATTGGGGTAGGATT+TGG | 0.293500 | 3.4:-40686487 | None:intergenic |
| TCCTGTGAGTCATCGGCTTA+TGG | 0.325210 | 3.4:+40686436 | MS.gene22197:CDS |
| TCATACTTCTTTGTATTTGT+TGG | 0.327303 | 3.4:-40686923 | None:intergenic |
| TACACAAACTGGGACTTAAC+AGG | 0.339806 | 3.4:-40686544 | None:intergenic |
| ATCCCTTCAGATATCTTCAT+TGG | 0.349727 | 3.4:-40686499 | None:intergenic |
| CCTTCATGTAGTAACGATTC+TGG | 0.376618 | 3.4:+40685747 | MS.gene22197:CDS |
| TTGAATGGTTGGACATTAGT+TGG | 0.377570 | 3.4:-40685819 | None:intergenic |
| TGTTATTTGGATACACAAAC+TGG | 0.390899 | 3.4:-40686555 | None:intergenic |
| TCCCTTCAGATATCTTCATT+GGG | 0.406133 | 3.4:-40686498 | None:intergenic |
| TTGGGAGTTGGCGGATTGAA+TGG | 0.422674 | 3.4:-40685834 | None:intergenic |
| CAAGTACCCCTACTGAAATT+CGG | 0.424717 | 3.4:+40685697 | MS.gene22197:CDS |
| TGCAGCAACCATCCCAATGA+TGG | 0.431713 | 3.4:-40686827 | None:intergenic |
| GAAGACAATGTGCATTGTAA+TGG | 0.431788 | 3.4:+40684595 | MS.gene22197:CDS |
| TCATTCTCGTCAAAAGCAAT+TGG | 0.431834 | 3.4:-40687521 | None:intergenic |
| ATGTTCCTGCGCAAGATTCA+AGG | 0.435844 | 3.4:+40686626 | MS.gene22197:CDS |
| AGGGATCACAGAGTGATGAT+AGG | 0.453830 | 3.4:+40684632 | MS.gene22197:CDS |
| CCTGTCGATAGGCCCATCAT+TGG | 0.456758 | 3.4:+40686814 | MS.gene22197:CDS |
| AAGACAATGTGCATTGTAAT+GGG | 0.459347 | 3.4:+40684596 | MS.gene22197:CDS |
| TTAACAGGGTAAACAGTTCC+AGG | 0.469267 | 3.4:-40686529 | None:intergenic |
| GAGCAAGATACTTGAGGAAG+AGG | 0.471401 | 3.4:+40686600 | MS.gene22197:CDS |
| AGAAGCCAAGAACGAAACTT+TGG | 0.484007 | 3.4:-40685774 | None:intergenic |
| TCCTCCAAAATAACAGATGC+AGG | 0.487575 | 3.4:-40686745 | None:intergenic |
| GATGGGACTGAAATGAATAA+GGG | 0.488622 | 3.4:+40686370 | MS.gene22197:CDS |
| ACGACGCCACGGACTGTGGA+TGG | 0.492778 | 3.4:-40687583 | None:intergenic |
| ATGGGAATATCATGACTCTT+CGG | 0.494202 | 3.4:+40686315 | MS.gene22197:CDS |
| CCAATGCACACAATACTCAA+TGG | 0.495131 | 3.4:+40686296 | MS.gene22197:CDS |
| GCAAAGTTTCTTAAAGCTTG+TGG | 0.503956 | 3.4:+40685666 | MS.gene22197:CDS |
| ATCTTCCTTGAATCTTGCGC+AGG | 0.504663 | 3.4:-40686631 | None:intergenic |
| CAATGCACACAATACTCAAT+GGG | 0.505196 | 3.4:+40686297 | MS.gene22197:CDS |
| TTCAGTAGGGGTACTTGCTA+TGG | 0.505440 | 3.4:-40685691 | None:intergenic |
| CTCTTCGGAAGGAAGTGGGC+AGG | 0.505993 | 3.4:+40686330 | MS.gene22197:CDS |
| CCAATGATGGGCCTATCGAC+AGG | 0.508176 | 3.4:-40686814 | None:intergenic |
| CCATTGAGTATTGTGTGCAT+TGG | 0.512181 | 3.4:-40686296 | None:intergenic |
| CTTCGGAAGGAAGTGGGCAG+GGG | 0.512249 | 3.4:+40686332 | MS.gene22197:CDS |
| TGCTCCTCCTCCTAAGTGGT+GGG | 0.512880 | 3.4:+40686876 | MS.gene22197:CDS |
| CATGACTCTTCGGAAGGAAG+TGG | 0.514139 | 3.4:+40686325 | MS.gene22197:CDS |
| GATGCTTTCCGAATTTCAGT+AGG | 0.514555 | 3.4:-40685705 | None:intergenic |
| CTGTCGATAGGCCCATCATT+GGG | 0.516223 | 3.4:+40686815 | MS.gene22197:CDS |
| CAACACGACGCCACGGACTG+TGG | 0.521235 | 3.4:-40687587 | None:intergenic |
| TCTTCGGAAGGAAGTGGGCA+GGG | 0.526061 | 3.4:+40686331 | MS.gene22197:CDS |
| TATTTCATCCTGTGAGTCAT+CGG | 0.528657 | 3.4:+40686429 | MS.gene22197:CDS |
| ATGCTCCTCCTCCTAAGTGG+TGG | 0.530708 | 3.4:+40686875 | MS.gene22197:CDS |
| GAGAAGAAAGAAAATGGAGA+TGG | 0.532138 | 3.4:+40686768 | MS.gene22197:CDS |
| TTAAAGATTAATAACCTGCT+AGG | 0.536769 | 3.4:-40685906 | None:intergenic |
| AGTGAATCTACCGTGGAAGA+AGG | 0.537717 | 3.4:+40686703 | MS.gene22197:CDS |
| TCTACTTTGTTTCTGACCGA+AGG | 0.540444 | 3.4:+40684459 | MS.gene22197:CDS |
| GTTCACAGGAAAGATATTTG+CGG | 0.540461 | 3.4:+40687494 | MS.gene22197:intron |
| CTTATTCATTTCAGTCCCAT+CGG | 0.540593 | 3.4:-40686368 | None:intergenic |
| GAGTTGGCGGATTGAATGGT+TGG | 0.541865 | 3.4:-40685830 | None:intergenic |
| GTTCAGACCACACACCTAGC+AGG | 0.546465 | 3.4:+40685892 | MS.gene22197:CDS |
| TCAGATATCTTCATTGGGGT+AGG | 0.551648 | 3.4:-40686493 | None:intergenic |
| AATGGATTATGAAATGATGA+AGG | 0.552080 | 3.4:+40683994 | None:intergenic |
| TTCATTTCAGTCCCATCGGT+CGG | 0.552448 | 3.4:-40686364 | None:intergenic |
| ATGCTTTCCGAATTTCAGTA+GGG | 0.554306 | 3.4:-40685704 | None:intergenic |
| GGGAGCTATCATCCGACCGA+TGG | 0.556557 | 3.4:+40686352 | MS.gene22197:CDS |
| TTCAGGACCAGAAAGTGAGC+TGG | 0.559748 | 3.4:+40687020 | MS.gene22197:intron |
| ACCATAAGCCGATGACTCAC+AGG | 0.559884 | 3.4:-40686437 | None:intergenic |
| CCTCCTCCTAAGTGGTGGGA+TGG | 0.560739 | 3.4:+40686880 | MS.gene22197:CDS |
| CCATTGCCATCCCACCACTT+AGG | 0.560739 | 3.4:-40686886 | None:intergenic |
| TCTGAAGGGATGCAAACTCC+TGG | 0.562862 | 3.4:+40686511 | MS.gene22197:CDS |
| TCAGAAACAAAGTAGACAAA+CGG | 0.567517 | 3.4:-40684452 | None:intergenic |
| CGACGCCACGGACTGTGGAT+GGG | 0.567931 | 3.4:-40687582 | None:intergenic |
| CCTAAGTGGTGGGATGGCAA+TGG | 0.569676 | 3.4:+40686886 | MS.gene22197:CDS |
| GTGTATCCAAATAACAGCCT+AGG | 0.571499 | 3.4:+40686562 | MS.gene22197:CDS |
| ATGCTACGCCGTTCGAAGAG+AGG | 0.575521 | 3.4:+40687044 | MS.gene22197:CDS |
| ACCCCAATGAAGATATCTGA+AGG | 0.577653 | 3.4:+40686496 | MS.gene22197:CDS |
| CCATCCCACCACTTAGGAGG+AGG | 0.578549 | 3.4:-40686880 | None:intergenic |
| AGTATCACATTCAAAACGTA+CGG | 0.579270 | 3.4:-40686404 | None:intergenic |
| TTGGGATGGTTGCTGCACAT+TGG | 0.584288 | 3.4:+40686833 | MS.gene22197:CDS |
| GGAGCTATCATCCGACCGAT+GGG | 0.587580 | 3.4:+40686353 | MS.gene22197:CDS |
| GTTCGAAGAGAGGTTGGAGA+AGG | 0.592220 | 3.4:+40687054 | MS.gene22197:CDS |
| CGATAGGCCCATCATTGGGA+TGG | 0.592976 | 3.4:+40686819 | MS.gene22197:CDS |
| AGCCAAGAACGAAACTTTGG+AGG | 0.594708 | 3.4:-40685771 | None:intergenic |
| TAGATATCAACACGACGCCA+CGG | 0.596729 | 3.4:-40687594 | None:intergenic |
| TACTGAAATTCGGAAAGCAT+CGG | 0.598546 | 3.4:+40685707 | MS.gene22197:CDS |
| TTCTCCAACCTCTCTTCGAA+CGG | 0.599277 | 3.4:-40687052 | None:intergenic |
| AGTCATCGGCTTATGGTGGA+TGG | 0.599998 | 3.4:+40686443 | MS.gene22197:CDS |
| GCAGCAACCATCCCAATGAT+GGG | 0.601660 | 3.4:-40686826 | None:intergenic |
| CTGATGCTCCTCCTCCTAAG+TGG | 0.601801 | 3.4:+40686872 | MS.gene22197:CDS |
| TCCAAATAACAGCCTAGGTG+AGG | 0.601979 | 3.4:+40686567 | MS.gene22197:CDS |
| CTCTAAGAGCAAGATACTTG+AGG | 0.603618 | 3.4:+40686594 | MS.gene22197:CDS |
| TTGCCATCCCACCACTTAGG+AGG | 0.606952 | 3.4:-40686883 | None:intergenic |
| TACGCCGTTCGAAGAGAGGT+TGG | 0.606989 | 3.4:+40687048 | MS.gene22197:CDS |
| CCCTTCAGATATCTTCATTG+GGG | 0.615934 | 3.4:-40686497 | None:intergenic |
| CCAGAATCGTTACTACATGA+AGG | 0.617304 | 3.4:-40685747 | None:intergenic |
| ATGACTCTTCGGAAGGAAGT+GGG | 0.617710 | 3.4:+40686326 | MS.gene22197:CDS |
| TGCTTTCCGAATTTCAGTAG+GGG | 0.618402 | 3.4:-40685703 | None:intergenic |
| AGGATACTATCATCGCTCAA+AGG | 0.620789 | 3.4:+40687086 | MS.gene22197:CDS |
| CCCGCAAAACTCCTGTCGAT+AGG | 0.624406 | 3.4:+40686803 | MS.gene22197:CDS |
| AGAAGACAAGCCTTCTTCCA+CGG | 0.626278 | 3.4:-40686713 | None:intergenic |
| TTCATCCCATCCACAGTCCG+TGG | 0.627583 | 3.4:+40687577 | MS.gene22197:CDS |
| CCCCAATGAAGATATCTGAA+GGG | 0.632021 | 3.4:+40686497 | MS.gene22197:CDS |
| GAATATCATGACTCTTCGGA+AGG | 0.632054 | 3.4:+40686319 | MS.gene22197:CDS |
| CTTTGTAAAGCAGGATGATG+TGG | 0.633113 | 3.4:+40684419 | MS.gene22197:intron |
| TGCTGCACATTGGATTGAAG+AGG | 0.634738 | 3.4:+40686843 | MS.gene22197:CDS |
| ACACAAACTGGGACTTAACA+GGG | 0.635382 | 3.4:-40686543 | None:intergenic |
| TGTGAGTCATCGGCTTATGG+TGG | 0.636034 | 3.4:+40686439 | MS.gene22197:CDS |
| TTAATAACCTGCTAGGTGTG+TGG | 0.641765 | 3.4:-40685899 | None:intergenic |
| GTTGGAGAAGGCATTATCTG+AGG | 0.647231 | 3.4:+40687066 | MS.gene22197:CDS |
| ATGGGACTGAAATGAATAAG+GGG | 0.654668 | 3.4:+40686371 | MS.gene22197:CDS |
| GTTATTTGGATACACAAACT+GGG | 0.662575 | 3.4:-40686554 | None:intergenic |
| AGATAAAAGTGAATCTACCG+TGG | 0.669633 | 3.4:+40686696 | MS.gene22197:CDS |
| TCTTAGAGACATCCTCACCT+AGG | 0.675023 | 3.4:-40686579 | None:intergenic |
| TGATAGGCAGCTTAAAGACG+AGG | 0.694138 | 3.4:+40684648 | MS.gene22197:CDS |
| GGACTGAAATGAATAAGGGG+AGG | 0.697836 | 3.4:+40686374 | MS.gene22197:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAGGTTATATTTAATA+TGG | - | chr3.4:40686240-40686259 | None:intergenic | 15.0% |
| !!! | AAAGTATTTAATAGTTTTCA+TGG | + | chr3.4:40684222-40684241 | MS.gene22197:intron | 15.0% |
| !!! | AAGTATTTAATAGTTTTCAT+GGG | + | chr3.4:40684223-40684242 | MS.gene22197:intron | 15.0% |
| !!! | TAGTGTTTGAAATTTTATTT+AGG | + | chr3.4:40684058-40684077 | MS.gene22197:intron | 15.0% |
| !! | AAAGAAATTAACTACTGAAA+AGG | - | chr3.4:40686255-40686274 | None:intergenic | 20.0% |
| !! | AATAGACAAATGACTTAAAA+AGG | - | chr3.4:40685582-40685601 | None:intergenic | 20.0% |
| !! | TAGCAAAATAAATTTACCTT+CGG | - | chr3.4:40684478-40684497 | None:intergenic | 20.0% |
| !!! | AAAATTGGTGTTTTAGAAAA+TGG | + | chr3.4:40686129-40686148 | MS.gene22197:intron | 20.0% |
| !!! | AATATCGTTTTAACTTTCAA+AGG | - | chr3.4:40687155-40687174 | None:intergenic | 20.0% |
| !!! | CTTTAACCTTTTTTTTTGAA+AGG | + | chr3.4:40685923-40685942 | MS.gene22197:intron | 20.0% |
| !!! | TCTCTTTACTTTTTTAATGA+AGG | + | chr3.4:40685240-40685259 | MS.gene22197:intron | 20.0% |
| !!! | TTAAGTTTGTTTACATGATT+TGG | + | chr3.4:40685630-40685649 | MS.gene22197:intron | 20.0% |
| !!! | TTCCCTTTTAGATTTTTTAA+GGG | + | chr3.4:40686172-40686191 | MS.gene22197:intron | 20.0% |
| !!! | TTTAGATAATTGAGTTTTTG+AGG | - | chr3.4:40685398-40685417 | None:intergenic | 20.0% |
| !!! | TTTCCCTTTTAGATTTTTTA+AGG | + | chr3.4:40686171-40686190 | MS.gene22197:intron | 20.0% |
| ! | AATGTTACCGTTTATGTTTA+TGG | + | chr3.4:40685012-40685031 | MS.gene22197:intron | 25.0% |
| ! | AGATTGCCTTTCAAAAAAAA+AGG | - | chr3.4:40685932-40685951 | None:intergenic | 25.0% |
| ! | ATGCCCTTAAAAAATCTAAA+AGG | - | chr3.4:40686178-40686197 | None:intergenic | 25.0% |
| ! | CAAAAAACAATGTGAAGAAT+GGG | + | chr3.4:40685854-40685873 | MS.gene22197:CDS | 25.0% |
| ! | GAAAACAATCAGCATTAATT+AGG | - | chr3.4:40687003-40687022 | None:intergenic | 25.0% |
| ! | GAAAGATAAAAAATAGCTTC+AGG | - | chr3.4:40684916-40684935 | None:intergenic | 25.0% |
| ! | GACATACTATATAGATATAC+AGG | - | chr3.4:40685322-40685341 | None:intergenic | 25.0% |
| ! | TAATGAAGGTAGAAATTATC+TGG | + | chr3.4:40685254-40685273 | MS.gene22197:intron | 25.0% |
| ! | TCATACTTCTTTGTATTTGT+TGG | - | chr3.4:40686926-40686945 | None:intergenic | 25.0% |
| ! | TGCCCTTAAAAAATCTAAAA+GGG | - | chr3.4:40686177-40686196 | None:intergenic | 25.0% |
| ! | TGGTAAATTGCTTATGTATA+TGG | - | chr3.4:40687323-40687342 | None:intergenic | 25.0% |
| ! | TTAAAGATTAATAACCTGCT+AGG | - | chr3.4:40685909-40685928 | None:intergenic | 25.0% |
| ! | TTACAGATAAATGCACAATT+TGG | + | chr3.4:40685192-40685211 | MS.gene22197:intron | 25.0% |
| !! | CTCAGTAATGTACTAATTTT+GGG | + | chr3.4:40684550-40684569 | MS.gene22197:intron | 25.0% |
| !! | TCAGTAATGTACTAATTTTG+GGG | + | chr3.4:40684551-40684570 | MS.gene22197:intron | 25.0% |
| !! | TCTCAGTAATGTACTAATTT+TGG | + | chr3.4:40684549-40684568 | MS.gene22197:intron | 25.0% |
| !! | TGCTTTAACTTAGTTAATGT+AGG | + | chr3.4:40685073-40685092 | MS.gene22197:intron | 25.0% |
| !! | TTGTATTTGTTGGTTGAATT+TGG | - | chr3.4:40686916-40686935 | None:intergenic | 25.0% |
| !!! | AATTAATGCTGATTGTTTTC+AGG | + | chr3.4:40687003-40687022 | MS.gene22197:intron | 25.0% |
| !!! | CATTCTTCACATTGTTTTTT+GGG | - | chr3.4:40685855-40685874 | None:intergenic | 25.0% |
| !!! | CTTTTACAGTTTTGATGTTA+TGG | + | chr3.4:40684524-40684543 | MS.gene22197:intron | 25.0% |
| !!! | GGGTTTAAATTTTGAAAAGA+GGG | + | chr3.4:40684571-40684590 | MS.gene22197:intron | 25.0% |
| !!! | GTTCTAGTTACTGAAATTTT+AGG | + | chr3.4:40684186-40684205 | MS.gene22197:intron | 25.0% |
| !!! | TGTCTTTTTGATTTGTGATT+TGG | + | chr3.4:40687472-40687491 | MS.gene22197:intron | 25.0% |
| !!! | TTTTATTTAGGAGCTTTGTT+TGG | + | chr3.4:40684070-40684089 | MS.gene22197:intron | 25.0% |
| !!! | TTTTTAAGGGCATATCTTAT+GGG | + | chr3.4:40686185-40686204 | MS.gene22197:intron | 25.0% |
| !!! | TTTTTTAAGGGCATATCTTA+TGG | + | chr3.4:40686184-40686203 | MS.gene22197:intron | 25.0% |
| AAATTCATCATCTCAAGAAG+GGG | - | chr3.4:40684155-40684174 | None:intergenic | 30.0% | |
| AACAACCACACAATCAATTT+CGG | + | chr3.4:40685996-40686015 | MS.gene22197:intron | 30.0% | |
| AAGACAATGTGCATTGTAAT+GGG | + | chr3.4:40684596-40684615 | MS.gene22197:CDS | 30.0% | |
| AAGAGATTGCAGTTAAGTTA+TGG | - | chr3.4:40685226-40685245 | None:intergenic | 30.0% | |
| AATGTGTTCCTCTTCAAAAT+TGG | + | chr3.4:40686114-40686133 | MS.gene22197:intron | 30.0% | |
| ACAAATTCATCATCTCAAGA+AGG | - | chr3.4:40684157-40684176 | None:intergenic | 30.0% | |
| AGAAACCTGTATGATTTAGT+GGG | - | chr3.4:40687444-40687463 | None:intergenic | 30.0% | |
| AGACTTCTAATTCTTTCACA+TGG | - | chr3.4:40686966-40686985 | None:intergenic | 30.0% | |
| AGGAATTCAACGATACATAA+AGG | - | chr3.4:40687247-40687266 | None:intergenic | 30.0% | |
| AGTATCACATTCAAAACGTA+CGG | - | chr3.4:40686407-40686426 | None:intergenic | 30.0% | |
| ATACAATGTAGTGAGTATCA+AGG | - | chr3.4:40685139-40685158 | None:intergenic | 30.0% | |
| CAAATTCATCATCTCAAGAA+GGG | - | chr3.4:40684156-40684175 | None:intergenic | 30.0% | |
| CCAAAAAACAATGTGAAGAA+TGG | + | chr3.4:40685853-40685872 | MS.gene22197:CDS | 30.0% | |
| CTGTCTACCATAAACATAAA+CGG | - | chr3.4:40685022-40685041 | None:intergenic | 30.0% | |
| GTACATTACATGCATTAAAC+AGG | - | chr3.4:40685959-40685978 | None:intergenic | 30.0% | |
| GTTATTTGGATACACAAACT+GGG | - | chr3.4:40686557-40686576 | None:intergenic | 30.0% | |
| TAAGCCTTTCTTATACAAGA+TGG | - | chr3.4:40686059-40686078 | None:intergenic | 30.0% | |
| TCAATTCAATACTTGAGAGT+TGG | - | chr3.4:40684947-40684966 | None:intergenic | 30.0% | |
| TCAGAAACAAAGTAGACAAA+CGG | - | chr3.4:40684455-40684474 | None:intergenic | 30.0% | |
| TCTTGTATAAGAAAGGCTTA+AGG | + | chr3.4:40686059-40686078 | MS.gene22197:intron | 30.0% | |
| TGTAATGTGTATTCGCAATT+CGG | + | chr3.4:40684762-40684781 | MS.gene22197:intron | 30.0% | |
| TTATTTACTATTAGCGCGAT+GGG | + | chr3.4:40686030-40686049 | MS.gene22197:intron | 30.0% | |
| ! | AGAACTCTACTTGATAGTAT+TGG | + | chr3.4:40684844-40684863 | MS.gene22197:intron | 30.0% |
| ! | ATACAAAGAAGTATGATCCT+TGG | + | chr3.4:40686930-40686949 | MS.gene22197:intron | 30.0% |
| ! | CTTTAGTTTCTGTTTAAGTG+AGG | + | chr3.4:40684982-40685001 | MS.gene22197:intron | 30.0% |
| ! | TAAAATAGCTGATGTTTTGC+TGG | + | chr3.4:40685421-40685440 | MS.gene22197:intron | 30.0% |
| ! | TGTTATTTGGATACACAAAC+TGG | - | chr3.4:40686558-40686577 | None:intergenic | 30.0% |
| ! | TTGGTAGCTAAAATGTTGAA+TGG | + | chr3.4:40684089-40684108 | MS.gene22197:intron | 30.0% |
| !! | ATGATTTGGTAAACATTTGC+AGG | + | chr3.4:40685644-40685663 | MS.gene22197:intron | 30.0% |
| !! | CATTGTATTTTTCGATCTCA+AGG | + | chr3.4:40685151-40685170 | MS.gene22197:intron | 30.0% |
| !! | CTAAAACACCAATTTTGAAG+AGG | - | chr3.4:40686125-40686144 | None:intergenic | 30.0% |
| !! | GGGGTTTAAATTTTGAAAAG+AGG | + | chr3.4:40684570-40684589 | MS.gene22197:intron | 30.0% |
| !! | TTGTAATGGGAGAAATTTTG+AGG | + | chr3.4:40684609-40684628 | MS.gene22197:CDS | 30.0% |
| !! | TTTTAAGGGCATATCTTATG+GGG | + | chr3.4:40686186-40686205 | MS.gene22197:intron | 30.0% |
| !!! | CCATTCTTCACATTGTTTTT+TGG | - | chr3.4:40685856-40685875 | None:intergenic | 30.0% |
| !!! | GACTTAAAAAGGTGTTTTTG+AGG | - | chr3.4:40685571-40685590 | None:intergenic | 30.0% |
| !!! | TTTTGACTTTTTGATGTGAC+TGG | + | chr3.4:40684384-40684403 | MS.gene22197:intron | 30.0% |
| AGAAATTATCTGGTTGTCCA+TGG | + | chr3.4:40685264-40685283 | MS.gene22197:intron | 35.0% | |
| AGAAGTTTGTACTTCTGATG+CGG | + | chr3.4:40687176-40687195 | MS.gene22197:intron | 35.0% | |
| AGATAAAAGTGAATCTACCG+TGG | + | chr3.4:40686696-40686715 | MS.gene22197:CDS | 35.0% | |
| ATAGCTTCAGGTCATAATTC+TGG | - | chr3.4:40684904-40684923 | None:intergenic | 35.0% | |
| ATCCCTTCAGATATCTTCAT+TGG | - | chr3.4:40686502-40686521 | None:intergenic | 35.0% | |
| ATGCTTTCCGAATTTCAGTA+GGG | - | chr3.4:40685707-40685726 | None:intergenic | 35.0% | |
| ATGGGAATATCATGACTCTT+CGG | + | chr3.4:40686315-40686334 | MS.gene22197:CDS | 35.0% | |
| ATGGGACTGAAATGAATAAG+GGG | + | chr3.4:40686371-40686390 | MS.gene22197:CDS | 35.0% | |
| CAATGCACACAATACTCAAT+GGG | + | chr3.4:40686297-40686316 | MS.gene22197:CDS | 35.0% | |
| CTTATTCATTTCAGTCCCAT+CGG | - | chr3.4:40686371-40686390 | None:intergenic | 35.0% | |
| CTTATTTACTATTAGCGCGA+TGG | + | chr3.4:40686029-40686048 | MS.gene22197:intron | 35.0% | |
| GAAGACAATGTGCATTGTAA+TGG | + | chr3.4:40684595-40684614 | MS.gene22197:CDS | 35.0% | |
| GACACCATCTTGTATAAGAA+AGG | + | chr3.4:40686052-40686071 | MS.gene22197:intron | 35.0% | |
| GAGAAACCTGTATGATTTAG+TGG | - | chr3.4:40687445-40687464 | None:intergenic | 35.0% | |
| GAGAAGAAAGAAAATGGAGA+TGG | + | chr3.4:40686768-40686787 | MS.gene22197:CDS | 35.0% | |
| GATATAAGACTAAGACACTG+AGG | + | chr3.4:40684798-40684817 | MS.gene22197:intron | 35.0% | |
| GATGGGACTGAAATGAATAA+GGG | + | chr3.4:40686370-40686389 | MS.gene22197:CDS | 35.0% | |
| GCAAAGTTTCTTAAAGCTTG+TGG | + | chr3.4:40685666-40685685 | MS.gene22197:CDS | 35.0% | |
| GCACTCAATACAAAAGTAAG+TGG | - | chr3.4:40687358-40687377 | None:intergenic | 35.0% | |
| GGTAAGTGTTATACTAACGA+TGG | - | chr3.4:40685101-40685120 | None:intergenic | 35.0% | |
| GTTCACAGGAAAGATATTTG+CGG | + | chr3.4:40687494-40687513 | MS.gene22197:intron | 35.0% | |
| TATTTCATCCTGTGAGTCAT+CGG | + | chr3.4:40686429-40686448 | MS.gene22197:CDS | 35.0% | |
| TCATTCTCGTCAAAAGCAAT+TGG | - | chr3.4:40687524-40687543 | None:intergenic | 35.0% | |
| TCCCTTCAGATATCTTCATT+GGG | - | chr3.4:40686501-40686520 | None:intergenic | 35.0% | |
| TTCATGCATGTTTAGCTGTT+TGG | + | chr3.4:40684722-40684741 | MS.gene22197:intron | 35.0% | |
| TTGAATGGTTGGACATTAGT+TGG | - | chr3.4:40685822-40685841 | None:intergenic | 35.0% | |
| ! | GAAGAGGAACACATTTTCTT+AGG | - | chr3.4:40686109-40686128 | None:intergenic | 35.0% |
| ! | GAATTTGCTCTTTGTAAAGC+AGG | + | chr3.4:40684410-40684429 | MS.gene22197:intron | 35.0% |
| ! | GTAAGTGGTCTTTTGTCAAA+TGG | - | chr3.4:40687343-40687362 | None:intergenic | 35.0% |
| ! | TACTGAAATTCGGAAAGCAT+CGG | + | chr3.4:40685707-40685726 | MS.gene22197:CDS | 35.0% |
| !! | AATGGGAGAAATTTTGAGGA+GGG | + | chr3.4:40684613-40684632 | MS.gene22197:CDS | 35.0% |
| !! | ACGGTAGATTCACTTTTATC+TGG | - | chr3.4:40686697-40686716 | None:intergenic | 35.0% |
| !! | AGTCTCGCGATTTTGATAAT+TGG | + | chr3.4:40687417-40687436 | MS.gene22197:intron | 35.0% |
| !! | ATTTTTCGATCTCAAGGTTC+TGG | + | chr3.4:40685157-40685176 | MS.gene22197:intron | 35.0% |
| !! | CAGTGTCTTAGTCTTATATC+AGG | - | chr3.4:40684798-40684817 | None:intergenic | 35.0% |
| !! | CTTCTGGTTGCTGAAATTTT+TGG | + | chr3.4:40684278-40684297 | MS.gene22197:intron | 35.0% |
| !! | TAATGGGAGAAATTTTGAGG+AGG | + | chr3.4:40684612-40684631 | MS.gene22197:CDS | 35.0% |
| !! | TGATTTGTGATTTGGTTCAC+AGG | + | chr3.4:40687480-40687499 | MS.gene22197:intron | 35.0% |
| !!! | TCACATTGTTTTTTGGGAGT+TGG | - | chr3.4:40685849-40685868 | None:intergenic | 35.0% |
| AACCACACAATCAATTTCGG+TGG | + | chr3.4:40685999-40686018 | MS.gene22197:intron | 40.0% | |
| ACACAAACTGGGACTTAACA+GGG | - | chr3.4:40686546-40686565 | None:intergenic | 40.0% | |
| ACCCCAATGAAGATATCTGA+AGG | + | chr3.4:40686496-40686515 | MS.gene22197:CDS | 40.0% | |
| AGAAGCCAAGAACGAAACTT+TGG | - | chr3.4:40685777-40685796 | None:intergenic | 40.0% | |
| AGGATACTATCATCGCTCAA+AGG | + | chr3.4:40687086-40687105 | MS.gene22197:CDS | 40.0% | |
| ATACACCACAAATCTTAGCC+AGG | - | chr3.4:40685296-40685315 | None:intergenic | 40.0% | |
| ATCCACCGAAATTGATTGTG+TGG | - | chr3.4:40686004-40686023 | None:intergenic | 40.0% | |
| ATCTTCATTGGGGTAGGATT+TGG | - | chr3.4:40686490-40686509 | None:intergenic | 40.0% | |
| ATGCATGTTTAGCTGTTTGG+AGG | + | chr3.4:40684725-40684744 | MS.gene22197:intron | 40.0% | |
| CAAGTACCCCTACTGAAATT+CGG | + | chr3.4:40685697-40685716 | MS.gene22197:CDS | 40.0% | |
| CACATGGAAAATAGCTACCA+AGG | - | chr3.4:40686950-40686969 | None:intergenic | 40.0% | |
| CCAATGCACACAATACTCAA+TGG | + | chr3.4:40686296-40686315 | MS.gene22197:CDS | 40.0% | |
| CCAGAATCGTTACTACATGA+AGG | - | chr3.4:40685750-40685769 | None:intergenic | 40.0% | |
| CCCCAATGAAGATATCTGAA+GGG | + | chr3.4:40686497-40686516 | MS.gene22197:CDS | 40.0% | |
| CCCTTCAGATATCTTCATTG+GGG | - | chr3.4:40686500-40686519 | None:intergenic | 40.0% | |
| CCTTCATGTAGTAACGATTC+TGG | + | chr3.4:40685747-40685766 | MS.gene22197:CDS | 40.0% | |
| CGAAGATGTCTCATTGAGAA+TGG | + | chr3.4:40684878-40684897 | MS.gene22197:intron | 40.0% | |
| CGATGGGACTGAAATGAATA+AGG | + | chr3.4:40686369-40686388 | MS.gene22197:CDS | 40.0% | |
| CTTTGTAAAGCAGGATGATG+TGG | + | chr3.4:40684419-40684438 | MS.gene22197:intron | 40.0% | |
| GAATATCATGACTCTTCGGA+AGG | + | chr3.4:40686319-40686338 | MS.gene22197:CDS | 40.0% | |
| GATGCTTTCCGAATTTCAGT+AGG | - | chr3.4:40685708-40685727 | None:intergenic | 40.0% | |
| GCAAACAACAGTGCTTTCAT+AGG | - | chr3.4:40687116-40687135 | None:intergenic | 40.0% | |
| GGAGGAGAGAAGAAAGAAAA+TGG | + | chr3.4:40686762-40686781 | MS.gene22197:CDS | 40.0% | |
| GTCTTATATCAGGAGCGAAA+TGG | - | chr3.4:40684788-40684807 | None:intergenic | 40.0% | |
| GTGTATCCAAATAACAGCCT+AGG | + | chr3.4:40686562-40686581 | MS.gene22197:CDS | 40.0% | |
| GTTGAGATGATCGCTTCATT+CGG | + | chr3.4:40684111-40684130 | MS.gene22197:intron | 40.0% | |
| TACAAGCATATGCATGTCCT+GGG | + | chr3.4:40685349-40685368 | MS.gene22197:intron | 40.0% | |
| TACACAAACTGGGACTTAAC+AGG | - | chr3.4:40686547-40686566 | None:intergenic | 40.0% | |
| TCAAGGCTTTCTTAGTATCG+TGG | - | chr3.4:40685122-40685141 | None:intergenic | 40.0% | |
| TCAGATATCTTCATTGGGGT+AGG | - | chr3.4:40686496-40686515 | None:intergenic | 40.0% | |
| TCCTCCAAAATAACAGATGC+AGG | - | chr3.4:40686748-40686767 | None:intergenic | 40.0% | |
| TGCTTTCCGAATTTCAGTAG+GGG | - | chr3.4:40685706-40685725 | None:intergenic | 40.0% | |
| TTAACAGGGTAAACAGTTCC+AGG | - | chr3.4:40686532-40686551 | None:intergenic | 40.0% | |
| TTAATAACCTGCTAGGTGTG+TGG | - | chr3.4:40685902-40685921 | None:intergenic | 40.0% | |
| TTCAACGTCATGCTAAACTC+AGG | - | chr3.4:40687267-40687286 | None:intergenic | 40.0% | |
| TTCTGAGTATGTTCTGCTTC+TGG | + | chr3.4:40684262-40684281 | MS.gene22197:intron | 40.0% | |
| TTGGTCCCACTAAATCATAC+AGG | + | chr3.4:40687436-40687455 | MS.gene22197:intron | 40.0% | |
| ! | AATAGCTGATGTTTTGCTGG+TGG | + | chr3.4:40685424-40685443 | MS.gene22197:intron | 40.0% |
| ! | CATTGAAGAAGTAAGCACTG+TGG | - | chr3.4:40685045-40685064 | None:intergenic | 40.0% |
| ! | CCATTGAGTATTGTGTGCAT+TGG | - | chr3.4:40686299-40686318 | None:intergenic | 40.0% |
| ! | CTCTAAGAGCAAGATACTTG+AGG | + | chr3.4:40686594-40686613 | MS.gene22197:CDS | 40.0% |
| !! | GAAGCCTGCATCTGTTATTT+TGG | + | chr3.4:40686741-40686760 | MS.gene22197:CDS | 40.0% |
| !! | TCTACTTTGTTTCTGACCGA+AGG | + | chr3.4:40684459-40684478 | MS.gene22197:CDS | 40.0% |
| !!! | CATTGTTTTTTGGGAGTTGG+CGG | - | chr3.4:40685846-40685865 | None:intergenic | 40.0% |
| AGAAGACAAGCCTTCTTCCA+CGG | - | chr3.4:40686716-40686735 | None:intergenic | 45.0% | |
| AGCCAAGAACGAAACTTTGG+AGG | - | chr3.4:40685774-40685793 | None:intergenic | 45.0% | |
| AGGGATCACAGAGTGATGAT+AGG | + | chr3.4:40684632-40684651 | MS.gene22197:CDS | 45.0% | |
| AGTGAATCTACCGTGGAAGA+AGG | + | chr3.4:40686703-40686722 | MS.gene22197:CDS | 45.0% | |
| ATCTTCCTTGAATCTTGCGC+AGG | - | chr3.4:40686634-40686653 | None:intergenic | 45.0% | |
| ATGACTCTTCGGAAGGAAGT+GGG | + | chr3.4:40686326-40686345 | MS.gene22197:CDS | 45.0% | |
| ATGTTCCTGCGCAAGATTCA+AGG | + | chr3.4:40686626-40686645 | MS.gene22197:CDS | 45.0% | |
| CTACAAGCATATGCATGTCC+TGG | + | chr3.4:40685348-40685367 | MS.gene22197:intron | 45.0% | |
| GAGCAAGATACTTGAGGAAG+AGG | + | chr3.4:40686600-40686619 | MS.gene22197:CDS | 45.0% | |
| GCATTCCTGGCTAAGATTTG+TGG | + | chr3.4:40685288-40685307 | MS.gene22197:intron | 45.0% | |
| GGACTGAAATGAATAAGGGG+AGG | + | chr3.4:40686374-40686393 | MS.gene22197:CDS | 45.0% | |
| GTCCTCCAAAGTTTCGTTCT+TGG | + | chr3.4:40685769-40685788 | MS.gene22197:CDS | 45.0% | |
| TCCAAATAACAGCCTAGGTG+AGG | + | chr3.4:40686567-40686586 | MS.gene22197:CDS | 45.0% | |
| TCCTCACCTAGGCTGTTATT+TGG | - | chr3.4:40686571-40686590 | None:intergenic | 45.0% | |
| TCTTAGAGACATCCTCACCT+AGG | - | chr3.4:40686582-40686601 | None:intergenic | 45.0% | |
| TGATAGGCAGCTTAAAGACG+AGG | + | chr3.4:40684648-40684667 | MS.gene22197:CDS | 45.0% | |
| TGCTGCACATTGGATTGAAG+AGG | + | chr3.4:40686843-40686862 | MS.gene22197:CDS | 45.0% | |
| TGGAAGAAGGCTTGTCTTCT+TGG | + | chr3.4:40686716-40686735 | MS.gene22197:CDS | 45.0% | |
| TTCATTTCAGTCCCATCGGT+CGG | - | chr3.4:40686367-40686386 | None:intergenic | 45.0% | |
| TTCTCCAACCTCTCTTCGAA+CGG | - | chr3.4:40687055-40687074 | None:intergenic | 45.0% | |
| ! | ATCTCAAGGTTCTGGCAGTA+GGG | + | chr3.4:40685165-40685184 | MS.gene22197:intron | 45.0% |
| !! | GTTGGAGAAGGCATTATCTG+AGG | + | chr3.4:40687066-40687085 | MS.gene22197:CDS | 45.0% |
| !! | TTCAGTAGGGGTACTTGCTA+TGG | - | chr3.4:40685694-40685713 | None:intergenic | 45.0% |
| !!! | GCCTGCATCTGTTATTTTGG+AGG | + | chr3.4:40686744-40686763 | MS.gene22197:CDS | 45.0% |
| AAAAGTTTGTGAGCCAGCCC+AGG | - | chr3.4:40685369-40685388 | None:intergenic | 50.0% | |
| ACCATAAGCCGATGACTCAC+AGG | - | chr3.4:40686440-40686459 | None:intergenic | 50.0% | |
| CATGACTCTTCGGAAGGAAG+TGG | + | chr3.4:40686325-40686344 | MS.gene22197:CDS | 50.0% | |
| CTGTCGATAGGCCCATCATT+GGG | + | chr3.4:40686815-40686834 | MS.gene22197:CDS | 50.0% | |
| GCAGCAACCATCCCAATGAT+GGG | - | chr3.4:40686829-40686848 | None:intergenic | 50.0% | |
| GTTCGAAGAGAGGTTGGAGA+AGG | + | chr3.4:40687054-40687073 | MS.gene22197:CDS | 50.0% | |
| TAGCATGCCAGCTCACTTTC+TGG | - | chr3.4:40687030-40687049 | None:intergenic | 50.0% | |
| TCTGAAGGGATGCAAACTCC+TGG | + | chr3.4:40686511-40686530 | MS.gene22197:CDS | 50.0% | |
| TCTTAGCCAGGAATGCACCA+TGG | - | chr3.4:40685284-40685303 | None:intergenic | 50.0% | |
| TGCAGCAACCATCCCAATGA+TGG | - | chr3.4:40686830-40686849 | None:intergenic | 50.0% | |
| TTCAGGACCAGAAAGTGAGC+TGG | + | chr3.4:40687020-40687039 | MS.gene22197:intron | 50.0% | |
| TTGGGATGGTTGCTGCACAT+TGG | + | chr3.4:40686833-40686852 | MS.gene22197:CDS | 50.0% | |
| ! | CCTATCGACAGGAGTTTTGC+GGG | - | chr3.4:40686806-40686825 | None:intergenic | 50.0% |
| ! | GATCTCAAGGTTCTGGCAGT+AGG | + | chr3.4:40685164-40685183 | MS.gene22197:intron | 50.0% |
| ! | GCCTATCGACAGGAGTTTTG+CGG | - | chr3.4:40686807-40686826 | None:intergenic | 50.0% |
| ! | GCTGATGTTTTGCTGGTGGA+AGG | + | chr3.4:40685428-40685447 | MS.gene22197:intron | 50.0% |
| !! | AGTCATCGGCTTATGGTGGA+TGG | + | chr3.4:40686443-40686462 | MS.gene22197:CDS | 50.0% |
| !! | GAGTTGGCGGATTGAATGGT+TGG | - | chr3.4:40685833-40685852 | None:intergenic | 50.0% |
| !! | TCCTGTGAGTCATCGGCTTA+TGG | + | chr3.4:40686436-40686455 | MS.gene22197:CDS | 50.0% |
| !! | TGTGAGTCATCGGCTTATGG+TGG | + | chr3.4:40686439-40686458 | MS.gene22197:CDS | 50.0% |
| !! | TTGGGAGTTGGCGGATTGAA+TGG | - | chr3.4:40685837-40685856 | None:intergenic | 50.0% |
| AGCATATGCATGTCCTGGGC+TGG | + | chr3.4:40685353-40685372 | MS.gene22197:intron | 55.0% | |
| ATGCTACGCCGTTCGAAGAG+AGG | + | chr3.4:40687044-40687063 | MS.gene22197:CDS | 55.0% | |
| ATGCTCCTCCTCCTAAGTGG+TGG | + | chr3.4:40686875-40686894 | MS.gene22197:CDS | 55.0% | |
| CCATTGCCATCCCACCACTT+AGG | - | chr3.4:40686889-40686908 | None:intergenic | 55.0% | |
| CCCGCAAAACTCCTGTCGAT+AGG | + | chr3.4:40686803-40686822 | MS.gene22197:CDS | 55.0% | |
| CCTGTCGATAGGCCCATCAT+TGG | + | chr3.4:40686814-40686833 | MS.gene22197:CDS | 55.0% | |
| CGATAGGCCCATCATTGGGA+TGG | + | chr3.4:40686819-40686838 | MS.gene22197:CDS | 55.0% | |
| CTGATGCTCCTCCTCCTAAG+TGG | + | chr3.4:40686872-40686891 | MS.gene22197:CDS | 55.0% | |
| GGAGCTATCATCCGACCGAT+GGG | + | chr3.4:40686353-40686372 | MS.gene22197:CDS | 55.0% | |
| GGTTGTCCATGGTGCATTCC+TGG | + | chr3.4:40685275-40685294 | MS.gene22197:intron | 55.0% | |
| GTTCAGACCACACACCTAGC+AGG | + | chr3.4:40685892-40685911 | MS.gene22197:CDS | 55.0% | |
| TACGCCGTTCGAAGAGAGGT+TGG | + | chr3.4:40687048-40687067 | MS.gene22197:CDS | 55.0% | |
| TCTTCGGAAGGAAGTGGGCA+GGG | + | chr3.4:40686331-40686350 | MS.gene22197:CDS | 55.0% | |
| TGCTCCTCCTCCTAAGTGGT+GGG | + | chr3.4:40686876-40686895 | MS.gene22197:CDS | 55.0% | |
| TTCATCCCATCCACAGTCCG+TGG | + | chr3.4:40687577-40687596 | MS.gene22197:CDS | 55.0% | |
| TTGCCATCCCACCACTTAGG+AGG | - | chr3.4:40686886-40686905 | None:intergenic | 55.0% | |
| ! | CCTAAGTGGTGGGATGGCAA+TGG | + | chr3.4:40686886-40686905 | MS.gene22197:CDS | 55.0% |
| !! | CCAATGATGGGCCTATCGAC+AGG | - | chr3.4:40686817-40686836 | None:intergenic | 55.0% |
| CCATCCCACCACTTAGGAGG+AGG | - | chr3.4:40686883-40686902 | None:intergenic | 60.0% | |
| CTCTTCGGAAGGAAGTGGGC+AGG | + | chr3.4:40686330-40686349 | MS.gene22197:CDS | 60.0% | |
| CTTCGGAAGGAAGTGGGCAG+GGG | + | chr3.4:40686332-40686351 | MS.gene22197:CDS | 60.0% | |
| GGGAGCTATCATCCGACCGA+TGG | + | chr3.4:40686352-40686371 | MS.gene22197:CDS | 60.0% | |
| ! | CCTCCTCCTAAGTGGTGGGA+TGG | + | chr3.4:40686880-40686899 | MS.gene22197:CDS | 60.0% |
| ! | ACGACGCCACGGACTGTGGA+TGG | - | chr3.4:40687586-40687605 | None:intergenic | 65.0% |
| ! | CAACACGACGCCACGGACTG+TGG | - | chr3.4:40687590-40687609 | None:intergenic | 65.0% |
| ! | CGACGCCACGGACTGTGGAT+GGG | - | chr3.4:40687585-40687604 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 40683995 | 40687610 | 40683995 | ID=MS.gene22197 |
| chr3.4 | mRNA | 40683995 | 40687610 | 40683995 | ID=MS.gene22197.t1;Parent=MS.gene22197 |
| chr3.4 | exon | 40683995 | 40684039 | 40683995 | ID=MS.gene22197.t1.exon1;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40683995 | 40684039 | 40683995 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40684432 | 40684480 | 40684432 | ID=MS.gene22197.t1.exon2;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40684432 | 40684480 | 40684432 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40684590 | 40684669 | 40684590 | ID=MS.gene22197.t1.exon3;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40684590 | 40684669 | 40684590 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40685666 | 40685913 | 40685666 | ID=MS.gene22197.t1.exon4;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40685666 | 40685913 | 40685666 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40686288 | 40686939 | 40686288 | ID=MS.gene22197.t1.exon5;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40686288 | 40686939 | 40686288 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40687025 | 40687107 | 40687025 | ID=MS.gene22197.t1.exon6;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40687025 | 40687107 | 40687025 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| chr3.4 | exon | 40687502 | 40687610 | 40687502 | ID=MS.gene22197.t1.exon7;Parent=MS.gene22197.t1 |
| chr3.4 | CDS | 40687502 | 40687610 | 40687502 | ID=cds.MS.gene22197.t1;Parent=MS.gene22197.t1 |
| Gene Sequence |
| Protein sequence |
