AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000607

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000607.t1 MTR_4g006730 99.672 305 1 0 1 305 1 305 0.0 611
MS.gene000607.t1 MTR_2g104940 83.226 310 44 3 1 305 4 310 3.70e-176 489
MS.gene000607.t1 MTR_4g006730 99.578 237 1 0 1 237 1 237 1.73e-171 476
MS.gene000607.t1 MTR_4g006730 100.000 218 0 0 88 305 1 218 5.46e-155 432
MS.gene000607.t1 MTR_4g006630 99.541 218 1 0 88 305 1 218 1.95e-154 431
MS.gene000607.t1 MTR_1g097840 59.028 288 103 2 7 288 9 287 1.77e-112 327
MS.gene000607.t1 MTR_1g097840 52.555 274 110 3 7 274 9 268 2.00e-84 255
MS.gene000607.t1 MTR_4g006650 92.908 141 1 1 76 216 5 136 5.32e-84 256
MS.gene000607.t1 MTR_8g087710 53.680 231 102 2 71 298 35 263 6.96e-78 238
MS.gene000607.t1 MTR_8g087720 53.744 227 100 2 75 298 38 262 7.72e-77 236
MS.gene000607.t1 MTR_2g017660 55.349 215 95 1 71 284 35 249 8.50e-74 228
MS.gene000607.t1 MTR_7g010650 46.311 244 129 1 61 304 23 264 3.77e-73 226
MS.gene000607.t1 MTR_2g017590 48.594 249 121 2 54 298 15 260 7.81e-72 223
MS.gene000607.t1 MTR_2g017610 51.261 238 107 3 71 305 34 265 2.62e-71 222
MS.gene000607.t1 MTR_2g017570 51.261 238 107 3 71 305 34 265 2.95e-71 221
MS.gene000607.t1 MTR_2g017620 48.594 249 121 2 54 298 17 262 3.34e-71 221
MS.gene000607.t1 MTR_2g017620 48.594 249 121 2 54 298 3 248 3.96e-71 221
MS.gene000607.t1 MTR_4g084880 46.269 268 128 5 50 305 5 268 1.60e-70 219
MS.gene000607.t1 MTR_5g079570 46.025 239 120 3 64 294 29 266 5.65e-61 195
MS.gene000607.t1 MTR_2g017620 53.261 184 79 2 119 298 1 181 2.27e-59 188
MS.gene000607.t1 MTR_3g008920 49.351 231 112 4 56 284 8 235 7.44e-59 189
MS.gene000607.t1 MTR_5g063930 45.116 215 112 2 75 285 37 249 1.68e-58 188
MS.gene000607.t1 MTR_8g087720 55.422 166 69 2 75 237 38 201 1.48e-51 169
MS.gene000607.t1 MTR_1g070385 40.909 220 130 0 73 292 60 279 6.59e-46 166
MS.gene000607.t1 MTR_7g010650 45.223 157 86 0 61 217 23 179 3.52e-40 139
MS.gene000607.t1 MTR_8g087720 53.425 146 63 2 75 217 38 181 8.96e-40 138
MS.gene000607.t1 MTR_2g101370 36.889 225 122 6 79 289 24 242 4.73e-32 119
MS.gene000607.t1 MTR_1g006490 37.073 205 109 7 80 272 24 220 1.74e-29 112
MS.gene000607.t1 MTR_8g013680 36.232 207 114 5 79 272 23 224 3.40e-28 109
MS.gene000607.t1 MTR_1g006590 35.610 205 112 7 80 272 24 220 7.43e-26 103
MS.gene000607.t1 MTR_1g077540 34.404 218 135 3 79 288 25 242 5.45e-25 101
MS.gene000607.t1 MTR_5g012810 35.122 205 118 4 79 272 23 223 1.33e-23 97.4
MS.gene000607.t1 MTR_6g069040 32.110 218 140 3 79 288 25 242 2.47e-23 96.7
MS.gene000607.t1 MTR_2g094270 29.520 271 149 7 68 304 22 284 5.86e-21 90.9
MS.gene000607.t1 MTR_3g118010 29.545 264 151 9 68 304 19 274 7.81e-21 90.5
MS.gene000607.t1 MTR_1g115405 29.817 218 145 3 79 288 25 242 1.82e-20 89.0
MS.gene000607.t1 MTR_4g063090 31.188 202 131 3 80 273 26 227 1.82e-19 86.3
MS.gene000607.t1 MTR_7g103030 33.981 206 119 5 79 272 25 225 4.76e-19 85.1
MS.gene000607.t1 MTR_7g101190 27.407 270 155 8 68 304 21 282 2.49e-18 83.6
MS.gene000607.t1 MTR_3g070210 28.279 244 147 8 68 283 37 280 1.49e-17 81.6
MS.gene000607.t1 MTR_2g094270 29.911 224 126 5 68 260 22 245 2.27e-17 80.5
MS.gene000607.t1 MTR_8g098375 28.205 234 140 8 68 273 34 267 1.55e-16 78.6
MS.gene000607.t1 MTR_2g060360 28.870 239 149 6 79 304 23 253 3.15e-16 77.0
MS.gene000607.t1 MTR_4g415300 28.302 212 134 6 79 273 60 270 4.97e-16 77.0
MS.gene000607.t1 MTR_5g010150 28.302 212 135 6 79 273 56 267 7.91e-16 76.6
MS.gene000607.t1 MTR_7g023350 27.523 218 150 3 79 288 25 242 1.23e-15 75.5
MS.gene000607.t1 MTR_5g082070 26.923 234 143 7 68 273 37 270 2.43e-15 75.1
MS.gene000607.t1 MTR_4g059390 26.838 272 154 8 68 304 21 282 2.69e-15 75.1
MS.gene000607.t1 MTR_3g070210 28.767 219 131 7 68 261 37 255 8.45e-15 73.6
MS.gene000607.t1 MTR_0793s0010 100.000 26 0 0 280 305 30 55 4.13e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000607.t1 AT1G80760 76.129 310 64 5 1 305 1 305 4.08e-161 451
MS.gene000607.t1 AT4G10380 69.200 250 67 3 43 288 48 291 4.54e-116 337
MS.gene000607.t1 AT4G19030 46.643 283 140 4 33 304 10 292 5.28e-76 234
MS.gene000607.t1 AT5G37820 47.967 246 124 3 55 298 24 267 6.88e-72 223
MS.gene000607.t1 AT5G37820 44.565 276 144 5 27 298 33 303 1.06e-71 224
MS.gene000607.t1 AT4G18910 44.178 292 143 5 29 304 2 289 1.68e-71 223
MS.gene000607.t1 AT5G37810 47.347 245 125 3 56 298 25 267 2.42e-69 217
MS.gene000607.t1 AT1G31885 45.161 248 128 2 65 304 33 280 1.12e-65 209
MS.gene000607.t1 AT1G31885 46.018 226 114 2 87 304 1 226 2.59e-60 193
MS.gene000607.t1 AT2G34390 40.942 276 144 6 43 305 13 282 2.47e-55 181
MS.gene000607.t1 AT4G19030 46.977 215 103 4 33 236 10 224 8.01e-53 172
MS.gene000607.t1 AT2G34390 43.882 237 117 5 79 305 10 240 1.46e-52 173
MS.gene000607.t1 AT4G18910 44.889 225 104 5 29 237 2 222 8.22e-49 162
MS.gene000607.t1 AT4G19030 44.898 196 97 4 33 217 10 205 6.90e-42 144
MS.gene000607.t1 AT3G06100 37.736 212 131 1 75 285 46 257 7.08e-42 146
MS.gene000607.t1 AT3G06100 37.850 214 126 3 79 288 2 212 2.78e-41 143
MS.gene000607.t1 AT2G34390 39.423 208 110 4 43 237 13 217 2.46e-35 127
MS.gene000607.t1 AT3G16240 37.198 207 112 5 79 272 23 224 1.34e-30 115
MS.gene000607.t1 AT2G34390 37.895 190 102 4 43 219 13 199 3.16e-28 108
MS.gene000607.t1 AT2G25810 34.928 209 118 6 75 272 19 220 2.09e-27 107
MS.gene000607.t1 AT2G29870 47.826 115 57 1 191 305 22 133 5.65e-26 100
MS.gene000607.t1 AT5G47450 34.361 227 123 7 79 284 23 244 2.64e-25 102
MS.gene000607.t1 AT4G17340 33.816 207 119 5 79 272 23 224 4.92e-24 98.6
MS.gene000607.t1 AT3G26520 32.314 229 136 5 79 294 26 248 1.09e-21 92.4
MS.gene000607.t1 AT2G36830 33.816 207 119 5 79 272 25 226 7.83e-21 89.7
MS.gene000607.t1 AT4G35100 29.242 277 161 9 55 304 7 275 9.25e-20 87.4
MS.gene000607.t1 AT4G35100 29.242 277 161 9 55 304 7 275 9.25e-20 87.4
MS.gene000607.t1 AT3G06100 33.813 139 91 1 151 288 41 179 1.12e-19 85.5
MS.gene000607.t1 AT2G16850 28.731 268 148 9 68 304 18 273 2.51e-18 83.6
MS.gene000607.t1 AT1G17810 30.357 224 139 6 79 287 28 249 9.80e-18 81.6
MS.gene000607.t1 AT1G73190 29.596 223 144 3 79 288 28 250 1.20e-17 81.3
MS.gene000607.t1 AT4G01470 28.755 233 140 6 79 290 25 252 1.50e-17 80.9
MS.gene000607.t1 AT5G60660 28.444 225 137 6 72 273 36 259 1.64e-17 81.3
MS.gene000607.t1 AT3G53420 26.568 271 156 8 68 304 21 282 8.90e-17 79.3
MS.gene000607.t1 AT3G53420 26.568 271 156 8 68 304 21 282 8.90e-17 79.3
MS.gene000607.t1 AT4G00430 29.060 234 137 8 68 273 35 267 9.92e-17 79.3
MS.gene000607.t1 AT2G37170 26.568 271 156 8 68 304 19 280 1.06e-16 79.0
MS.gene000607.t1 AT4G23400 29.717 212 131 6 79 273 57 267 1.29e-16 79.0
MS.gene000607.t1 AT1G31885 43.678 87 49 0 65 151 33 119 1.39e-16 75.5
MS.gene000607.t1 AT3G54820 29.259 270 150 8 68 304 20 281 1.93e-16 78.2
MS.gene000607.t1 AT2G37170 26.568 271 156 8 68 304 62 323 2.11e-16 79.0
MS.gene000607.t1 AT2G45960 29.487 234 136 8 68 273 34 266 2.39e-16 78.2
MS.gene000607.t1 AT1G01620 29.717 212 131 6 79 273 56 266 2.39e-16 78.2
MS.gene000607.t1 AT3G61430 30.516 213 128 7 79 273 56 266 1.44e-15 75.9
MS.gene000607.t1 AT3G61430 30.516 213 128 7 79 273 56 266 1.44e-15 75.9
MS.gene000607.t1 AT2G37180 26.199 271 157 8 68 304 19 280 2.23e-15 75.5
MS.gene000607.t1 AT2G39010 27.574 272 156 8 66 304 18 281 7.33e-14 70.9
MS.gene000607.t1 AT2G45960 30.093 216 125 7 68 258 34 248 7.46e-14 70.9
MS.gene000607.t1 AT3G47440 27.477 222 146 5 79 289 27 244 8.41e-14 70.5
MS.gene000607.t1 AT2G45960 30.093 216 125 7 68 258 34 248 8.93e-14 70.9
MS.gene000607.t1 AT1G01620 30.726 179 109 5 109 273 17 194 1.76e-13 68.9

Find 72 sgRNAs with CRISPR-Local

Find 435 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCAACTGGTCACATTTC+TGG 0.140657 4.3:+88639268 MS.gene000607:CDS
TGAGTTCTTTCTACCATTTC+CGG 0.229432 4.3:-88638546 None:intergenic
TCCTGTCCCTCTTGCCAAAA+AGG 0.248434 4.3:+88638658 MS.gene000607:CDS
GCTGGTCCTAGTGTTCTTAC+TGG 0.259920 4.3:-88644830 None:intergenic
TTTCTGAGTTATGTATCTTT+TGG 0.287885 4.3:-88639195 None:intergenic
CATAACTCAGAAACACTAAT+TGG 0.296495 4.3:+88639205 MS.gene000607:CDS
GCCCCTATTCTTGGTGCTCT+TGG 0.301422 4.3:+88644896 MS.gene000607:CDS
CCAGGAGTACCTGGTGTTGC+AGG 0.307997 4.3:-88638488 None:intergenic
TTCATTGAAGCTCCAGTTGC+AGG 0.320017 4.3:-88644806 None:intergenic
GTATATTGCTGCACAAGTTT+TGG 0.323183 4.3:+88639459 MS.gene000607:CDS
CATCATCTTCTGAAACTTCC+AGG 0.332213 4.3:-88644992 None:intergenic
CAGGTTGGAGCAGAGTTTAT+AGG 0.354046 4.3:+88639127 MS.gene000607:intron
CTTGGTGCTCTTGGTGGGGC+AGG 0.355406 4.3:+88644905 MS.gene000607:CDS
TATCTCATAGCCCCTATTCT+TGG 0.361100 4.3:+88644887 MS.gene000607:CDS
ACGGTTCCTTCAGTTGAATA+TGG 0.365783 4.3:+88639544 MS.gene000607:CDS
CACCAAGAGCACCAAGAATA+GGG 0.367072 4.3:-88644898 None:intergenic
CCTGGTGTTGCAGGGGTAGA+AGG 0.370805 4.3:-88638479 None:intergenic
ATATACTGCAGGCCTGCAAC+TGG 0.394672 4.3:+88644794 MS.gene000607:intron
TAGTTGTTTGCAGCAATTGC+TGG 0.400189 4.3:-88644848 None:intergenic
ATGCTCAACATACTCATTGC+TGG 0.401599 4.3:+88644201 MS.gene000607:CDS
TTGGCAAGAGGGACAGGAGG+GGG 0.402167 4.3:-88638653 None:intergenic
CCTATTCTTGGTGCTCTTGG+TGG 0.402986 4.3:+88644899 MS.gene000607:CDS
CCACCAAGAGCACCAAGAAT+AGG 0.407883 4.3:-88644899 None:intergenic
ATTGGATGTGCTGGAGCTAC+TGG 0.408901 4.3:+88639223 MS.gene000607:CDS
CTATTCTTGGTGCTCTTGGT+GGG 0.417084 4.3:+88644900 MS.gene000607:CDS
GGCAAAGAGCAAGTGACTTT+AGG 0.427110 4.3:-88638629 None:intergenic
ACATACATTCTAATGTTTGC+TGG 0.431868 4.3:+88639151 MS.gene000607:CDS
ATGCAGGTGGGAGAACTTGC+GGG 0.438650 4.3:+88644156 MS.gene000607:intron
AAATCTGAGAGAACCGGAAA+TGG 0.464963 4.3:+88638533 MS.gene000607:CDS
GGCTTCAAATCTGAGAGAAC+CGG 0.467137 4.3:+88638527 MS.gene000607:CDS
CTGCATTAAAACACTTCCCA+TGG 0.472333 4.3:+88639326 MS.gene000607:CDS
TCAGAGTTAAACTCTTCATC+AGG 0.475612 4.3:-88644950 None:intergenic
GAAACACTAATTGGATGTGC+TGG 0.482781 4.3:+88639214 MS.gene000607:CDS
CAAACAACTACAAAGGCATA+TGG 0.493499 4.3:+88644861 MS.gene000607:CDS
GCAAATGAAATCGTGACGGC+TGG 0.507617 4.3:-88639304 None:intergenic
GTGACACCACCACTCATGAA+TGG 0.510613 4.3:-88639523 None:intergenic
AGAGGAGCACCAGGAGTACC+TGG 0.512495 4.3:-88638497 None:intergenic
TATTCTTGGTGCTCTTGGTG+GGG 0.515515 4.3:+88644901 MS.gene000607:CDS
GAAGACTGGACTTTGGAAGA+TGG 0.520509 4.3:+88638599 MS.gene000607:CDS
ATCATCTTCTGAAACTTCCA+GGG 0.521569 4.3:-88644991 None:intergenic
CCTGCAACACCAGGTACTCC+TGG 0.524160 4.3:+88638488 MS.gene000607:CDS
GAAACTTCCAGGGGCAGAAG+AGG 0.526255 4.3:-88644981 None:intergenic
GTTAAAGCCTCTTCTGCCCC+TGG 0.527500 4.3:+88644974 MS.gene000607:CDS
TTTCATCCATTCATGAGTGG+TGG 0.532048 4.3:+88639517 MS.gene000607:CDS
TGCTCAACATACTCATTGCT+GGG 0.532589 4.3:+88644202 MS.gene000607:CDS
TAAACTCTAAAGCAAAAGCT+TGG 0.536190 4.3:-88639567 None:intergenic
TAGTGTTGAAGACTGGACTT+TGG 0.539097 4.3:+88638592 MS.gene000607:CDS
GCAGGGGTAGAAGGTACTGA+TGG 0.548827 4.3:-88638470 None:intergenic
GAACTTGCGGGAATCGCGGT+GGG 0.555721 4.3:+88644168 MS.gene000607:CDS
CAGGAGTACCTGGTGTTGCA+GGG 0.561442 4.3:-88638487 None:intergenic
CCTTCTACCCCTGCAACACC+AGG 0.571161 4.3:+88638479 MS.gene000607:CDS
GCTTGGCCATATTCAACTGA+AGG 0.575237 4.3:-88639550 None:intergenic
GGGAGAACTTGCGGGAATCG+CGG 0.575910 4.3:+88644164 MS.gene000607:CDS
TGATTAGAGTATGGACAATG+AGG 0.583019 4.3:+88638442 None:intergenic
AGAGCAAGTGACTTTAGGTA+AGG 0.585846 4.3:-88638624 None:intergenic
AGAACTTGCGGGAATCGCGG+TGG 0.586192 4.3:+88644167 MS.gene000607:CDS
ATGAATCCAGTAAGAACACT+AGG 0.586393 4.3:+88644824 MS.gene000607:CDS
ATTCATGAGTGGTGGTGTCA+CGG 0.586869 4.3:+88639525 MS.gene000607:CDS
AATGCAGGTGGGAGAACTTG+CGG 0.593498 4.3:+88644155 MS.gene000607:intron
ACCAAGAGCACCAAGAATAG+GGG 0.596229 4.3:-88644897 None:intergenic
TTTGGCAAGAGGGACAGGAG+GGG 0.604963 4.3:-88638654 None:intergenic
TGATGAAGAGTTTAACTCTG+AGG 0.607367 4.3:+88644952 MS.gene000607:CDS
ACTCACAGCTCTTGTGTCGG+TGG 0.611393 4.3:-88639629 None:intergenic
CATGTTTGTTGTCACTGCAG+TGG 0.612813 4.3:+88639606 MS.gene000607:CDS
CAGGGGTAGAAGGTACTGAT+GGG 0.615921 4.3:-88638469 None:intergenic
AGGAGTACCTGGTGTTGCAG+GGG 0.617692 4.3:-88638486 None:intergenic
TGCAGCAAATGAAATCGTGA+CGG 0.637791 4.3:-88639308 None:intergenic
TCATCTTCTGAAACTTCCAG+GGG 0.658967 4.3:-88644990 None:intergenic
ATTGCTGCAAACAACTACAA+AGG 0.670460 4.3:+88644854 MS.gene000607:CDS
TATACTCACAGCTCTTGTGT+CGG 0.674496 4.3:-88639632 None:intergenic
ACTTGTGCAGCAATATACAA+AGG 0.678381 4.3:-88639454 None:intergenic
GAGTATGTTGAGCATGACAG+TGG 0.737398 4.3:-88644193 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAATTTAATATT+TGG + chr4.3:88643990-88644009 MS.gene000607:intron 0.0%
!! TAATAAAAATATATATTTAA+TGG - chr4.3:88644340-88644359 None:intergenic 0.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr4.3:88639869-88639888 None:intergenic 10.0%
!! ATATTTGCATATTAAAAAAA+TGG - chr4.3:88643590-88643609 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr4.3:88639870-88639889 None:intergenic 10.0%
!! TTAAATAAGAAATGATTATA+CGG - chr4.3:88641159-88641178 None:intergenic 10.0%
!!! ATTTTTAAATTGAGAATAAT+TGG + chr4.3:88641683-88641702 MS.gene000607:intron 10.0%
!!! TAATTTTGTGAATTAATTTT+AGG + chr4.3:88639429-88639448 MS.gene000607:intron 10.0%
!! AAAGTTCTTATAATAGAATA+TGG - chr4.3:88639674-88639693 None:intergenic 15.0%
!! AATATTTATGCATAGTTATT+AGG - chr4.3:88642208-88642227 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG - chr4.3:88639804-88639823 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr4.3:88639868-88639887 None:intergenic 15.0%
!! ATAATTAGAAACAAATAAAG+AGG + chr4.3:88640135-88640154 MS.gene000607:intron 15.0%
!! ATTTAGAAAAAGATTATATG+AGG + chr4.3:88641914-88641933 MS.gene000607:intron 15.0%
!! ATTTGAAAGAAATTATCAAA+AGG + chr4.3:88641524-88641543 MS.gene000607:intron 15.0%
!! GAATACATTAAATTTATGTT+TGG + chr4.3:88638815-88638834 MS.gene000607:intron 15.0%
!! TAATTAAATAATTACATACG+TGG - chr4.3:88641041-88641060 None:intergenic 15.0%
!! TAATTAGAAACAAATAAAGA+GGG + chr4.3:88640136-88640155 MS.gene000607:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr4.3:88639805-88639824 None:intergenic 15.0%
!! TTATGATTGTATACATAAAT+CGG + chr4.3:88641621-88641640 MS.gene000607:intron 15.0%
!! TTGTCAAAAAAACAATAATA+TGG - chr4.3:88643402-88643421 None:intergenic 15.0%
!! TTTAGAAAAAGATTATATGA+GGG + chr4.3:88641915-88641934 MS.gene000607:intron 15.0%
!!! AAATTGTAATTTTCATACTT+AGG - chr4.3:88640941-88640960 None:intergenic 15.0%
!!! AAGTATGAAAATTACAATTT+TGG + chr4.3:88640941-88640960 MS.gene000607:intron 15.0%
!!! AATTGTAATTTTCATACTTA+GGG - chr4.3:88640940-88640959 None:intergenic 15.0%
!!! AGTTTTGATAAATTACAATT+TGG + chr4.3:88643340-88643359 MS.gene000607:intron 15.0%
!!! ATACTTTGTTTAAGAAAATA+AGG + chr4.3:88640041-88640060 MS.gene000607:intron 15.0%
!!! TAAAACATTTTAAATTCTTG+AGG - chr4.3:88638574-88638593 None:intergenic 15.0%
!!! TATTATTGTTTTTTTGACAA+AGG + chr4.3:88643402-88643421 MS.gene000607:intron 15.0%
!!! TTTGGTTTTTTTTATTTTTC+TGG - chr4.3:88641419-88641438 None:intergenic 15.0%
!! AAGATATCAAAAGTAATGAT+TGG - chr4.3:88640218-88640237 None:intergenic 20.0%
!! AATACAGTATAATTATACTG+TGG + chr4.3:88643029-88643048 MS.gene000607:intron 20.0%
!! AATTATATCAAGTACATCAT+TGG + chr4.3:88639042-88639061 MS.gene000607:intron 20.0%
!! CAGATCAATATATCAAAAAT+AGG - chr4.3:88639087-88639106 None:intergenic 20.0%
!! CATTGGTAAAAAAGTTAATA+GGG + chr4.3:88639059-88639078 MS.gene000607:intron 20.0%
!! TAATTAAATAATTACACACG+TGG + chr4.3:88642031-88642050 MS.gene000607:intron 20.0%
!! TATGCATAAATATTGAAAAC+AGG + chr4.3:88642214-88642233 MS.gene000607:intron 20.0%
!! TCATTGGTAAAAAAGTTAAT+AGG + chr4.3:88639058-88639077 MS.gene000607:intron 20.0%
!! TGAATTAGAAGATGAATTTA+AGG - chr4.3:88639375-88639394 None:intergenic 20.0%
!! TGATTAATGTAATTATTACC+AGG + chr4.3:88639108-88639127 MS.gene000607:intron 20.0%
!! TTTAAATCATTGCATATGTA+TGG - chr4.3:88638731-88638750 None:intergenic 20.0%
!! TTTAATATTTGGATACTCTT+CGG + chr4.3:88644001-88644020 MS.gene000607:intron 20.0%
!!! AAAAAGATTAATTGGGATTT+TGG + chr4.3:88641647-88641666 MS.gene000607:intron 20.0%
!!! AAAAGATTAATTGGGATTTT+GGG + chr4.3:88641648-88641667 MS.gene000607:intron 20.0%
!!! AAATTGTAGTTTTCATACTT+AGG + chr4.3:88642131-88642150 MS.gene000607:intron 20.0%
!!! AAGTATGAAAACTACAATTT+TGG - chr4.3:88642131-88642150 None:intergenic 20.0%
!!! AATTGTAGTTTTCATACTTA+GGG + chr4.3:88642132-88642151 MS.gene000607:intron 20.0%
!!! ATGATCATAATTTTATCAAC+TGG + chr4.3:88639256-88639275 MS.gene000607:CDS 20.0%
!!! CAAGTTTTTAAAAGTTAAGA+GGG - chr4.3:88640906-88640925 None:intergenic 20.0%
!!! CTTTTAAAAACTTGCAATTT+TGG + chr4.3:88640912-88640931 MS.gene000607:intron 20.0%
!!! GTATAACTTTTATCAAAATC+TGG + chr4.3:88638893-88638912 MS.gene000607:intron 20.0%
!!! GTTAATTAAATGTACCTTTT+TGG - chr4.3:88638675-88638694 None:intergenic 20.0%
!!! GTTTATATCATTTGTTTTGT+CGG - chr4.3:88644524-88644543 None:intergenic 20.0%
!!! TAAAGGTACAATTGTATATA+TGG + chr4.3:88640386-88640405 MS.gene000607:intron 20.0%
!!! TCTTTTTGGATTCAATTTTA+AGG - chr4.3:88640621-88640640 None:intergenic 20.0%
!!! TTGATTCCCTTTTTTTTAAT+CGG + chr4.3:88642808-88642827 MS.gene000607:intron 20.0%
!!! TTTATATCATTTGTTTTGTC+GGG - chr4.3:88644523-88644542 None:intergenic 20.0%
!!! TTTTAGTACATGTTGAAATT+AGG - chr4.3:88638945-88638964 None:intergenic 20.0%
!!! TTTTATATATCCATTTAGTG+AGG - chr4.3:88640720-88640739 None:intergenic 20.0%
! AAAGATCCAATATTCCATTT+AGG + chr4.3:88644559-88644578 MS.gene000607:intron 25.0%
! AAATACATACACGTAAAAAC+AGG - chr4.3:88644700-88644719 None:intergenic 25.0%
! AAGAGATATTGGCAATAATT+TGG - chr4.3:88641262-88641281 None:intergenic 25.0%
! AAGATGAATATAGTTTAGCT+TGG - chr4.3:88641376-88641395 None:intergenic 25.0%
! AATACTAACATATGTCCTTA+TGG + chr4.3:88640451-88640470 MS.gene000607:intron 25.0%
! ACAACTCCGATTAAAAAAAA+GGG - chr4.3:88642817-88642836 None:intergenic 25.0%
! AGAGATATTGGCAATAATTT+GGG - chr4.3:88641261-88641280 None:intergenic 25.0%
! ATGTTCATTGATACAATTAG+TGG - chr4.3:88640757-88640776 None:intergenic 25.0%
! ATTCGAATCAAATATGTTTC+AGG - chr4.3:88641476-88641495 None:intergenic 25.0%
! CAATCATAAATCATGTCATT+TGG - chr4.3:88641610-88641629 None:intergenic 25.0%
! CGAATGTGATTAAAATAATG+AGG - chr4.3:88644246-88644265 None:intergenic 25.0%
! CTAGACACTAAAATATTTAG+TGG + chr4.3:88644479-88644498 MS.gene000607:intron 25.0%
! GAAATGATTATACGGTTATA+TGG - chr4.3:88641151-88641170 None:intergenic 25.0%
! GAAATTCAGACATGTAAAAA+AGG + chr4.3:88644666-88644685 MS.gene000607:intron 25.0%
! GGAAGAAATTGTTAATGATT+GGG - chr4.3:88641304-88641323 None:intergenic 25.0%
! TAAAGTAACAGTGTCAAAAA+AGG + chr4.3:88643004-88643023 MS.gene000607:intron 25.0%
! TAATGTAATTATTACCAGGT+TGG + chr4.3:88639112-88639131 MS.gene000607:intron 25.0%
! TAGAAGAAAATAGTGAAAAG+AGG + chr4.3:88641442-88641461 MS.gene000607:intron 25.0%
! TCAAAAATCAAGATACGATA+CGG + chr4.3:88643511-88643530 MS.gene000607:intron 25.0%
! TGATAAAGCAAACAAAAATG+AGG - chr4.3:88641328-88641347 None:intergenic 25.0%
! TGGAAGAAATTGTTAATGAT+TGG - chr4.3:88641305-88641324 None:intergenic 25.0%
! TGTTGAAATTAGGATGAATT+TGG - chr4.3:88638935-88638954 None:intergenic 25.0%
! TGTTGCATCAAATAATAACT+AGG + chr4.3:88640864-88640883 MS.gene000607:intron 25.0%
! TTAATGTAGATAATGACTTG+TGG + chr4.3:88644121-88644140 MS.gene000607:intron 25.0%
! TTTAACTCTTAAAGCAAATG+AGG - chr4.3:88644456-88644475 None:intergenic 25.0%
! TTTGTGAAATCAATTTCTGA+TGG - chr4.3:88640350-88640369 None:intergenic 25.0%
!! AAAGATTAATTGGGATTTTG+GGG + chr4.3:88641649-88641668 MS.gene000607:intron 25.0%
!! ATTGTAGTTTTCATACTTAG+GGG + chr4.3:88642133-88642152 MS.gene000607:intron 25.0%
!! CACTATTTTCTTCTAACATT+TGG - chr4.3:88641437-88641456 None:intergenic 25.0%
!! CTTTCAAAAACTTGCAATTT+TGG - chr4.3:88642160-88642179 None:intergenic 25.0%
!! TTGAAATAGCTCAGTTATTT+TGG - chr4.3:88639758-88639777 None:intergenic 25.0%
!! TTTCTGAGTTATGTATCTTT+TGG - chr4.3:88639198-88639217 None:intergenic 25.0%
!! TTTTCTTTCTTTTTTTCCTC+TGG + chr4.3:88641762-88641781 MS.gene000607:intron 25.0%
!!! AATAATTGGTTTTCTAGACA+TGG + chr4.3:88641697-88641716 MS.gene000607:intron 25.0%
!!! GCAAGTTTTTAAAAGTTAAG+AGG - chr4.3:88640907-88640926 None:intergenic 25.0%
!!! GGACACTTTTTTTAGTAAAT+GGG - chr4.3:88639736-88639755 None:intergenic 25.0%
!!! TGAAATAGCTCAGTTATTTT+GGG - chr4.3:88639757-88639776 None:intergenic 25.0%
!!! TGCAAGTTTTTGAAAGTTAA+GGG + chr4.3:88642164-88642183 MS.gene000607:intron 25.0%
!!! TTGCAAGTTTTTGAAAGTTA+AGG + chr4.3:88642163-88642182 MS.gene000607:intron 25.0%
!!! TTGTTGTTACATTTTTCCAT+GGG - chr4.3:88639345-88639364 None:intergenic 25.0%
!!! TTTGTTGTTACATTTTTCCA+TGG - chr4.3:88639346-88639365 None:intergenic 25.0%
AAAAAGGACCAAATTTGCAA+TGG + chr4.3:88642088-88642107 MS.gene000607:intron 30.0%
AAAAAGGACCAAATTTGCAA+TGG - chr4.3:88642107-88642088 None:intergenic 30.0%
AAAAGGACCAAATTTGCAAT+GGG + chr4.3:88642089-88642108 MS.gene000607:intron 30.0%
AAAAGGACCAAATTTGCAAT+GGG - chr4.3:88642108-88642089 None:intergenic 30.0%
AAATAATGAGGAGTGAAAGT+TGG - chr4.3:88644234-88644253 None:intergenic 30.0%
AAATATCTCACTGCAAAACA+TGG - chr4.3:88640791-88640810 None:intergenic 30.0%
AAGAAAAGAGGTGAAAAAGA+AGG - chr4.3:88642553-88642572 None:intergenic 30.0%
AATATTGACGATTAAGAGAG+TGG + chr4.3:88643661-88643680 MS.gene000607:intron 30.0%
AATGCTACACTATATCCAAA+AGG + chr4.3:88643743-88643762 MS.gene000607:intron 30.0%
ACATACATTCTAATGTTTGC+TGG + chr4.3:88639151-88639170 MS.gene000607:CDS 30.0%
AGAAAAGAGGTGAAAAAGAA+GGG - chr4.3:88642552-88642571 None:intergenic 30.0%
AGATACGTTGCAAATTCTTA+AGG + chr4.3:88644408-88644427 MS.gene000607:intron 30.0%
AGGAAATGCAAATAAACAAG+AGG + chr4.3:88640061-88640080 MS.gene000607:intron 30.0%
ATCGGTGGAAAAAGATTAAT+TGG + chr4.3:88641639-88641658 MS.gene000607:intron 30.0%
ATTAACAAACACAAGAAACC+AGG + chr4.3:88643610-88643629 MS.gene000607:intron 30.0%
CACAACTCCGATTAAAAAAA+AGG - chr4.3:88642818-88642837 None:intergenic 30.0%
CACAATTCAAATAGTAGTTG+TGG + chr4.3:88638973-88638992 MS.gene000607:intron 30.0%
CATAACTCAGAAACACTAAT+TGG + chr4.3:88639205-88639224 MS.gene000607:CDS 30.0%
CATTCATCAAATAAATCCAG+AGG - chr4.3:88641781-88641800 None:intergenic 30.0%
GAGATATTGGCAATAATTTG+GGG - chr4.3:88641260-88641279 None:intergenic 30.0%
GCAATAATTTGGGGATTTAT+GGG - chr4.3:88641251-88641270 None:intergenic 30.0%
GTACACTAACAAATACCATA+AGG - chr4.3:88640469-88640488 None:intergenic 30.0%
GTTATGTTGAGAAGAGATAT+TGG - chr4.3:88641273-88641292 None:intergenic 30.0%
GTTGATATATATGAGACAGA+GGG - chr4.3:88643167-88643186 None:intergenic 30.0%
TAAAGCAAACAAAAATGAGG+TGG - chr4.3:88641325-88641344 None:intergenic 30.0%
TAGAATGAATGAAAGAAAGC+AGG - chr4.3:88642764-88642783 None:intergenic 30.0%
TATGAAGATGAAGAAGATGA+GGG + chr4.3:88641803-88641822 MS.gene000607:intron 30.0%
TCGGTGGAAAAAGATTAATT+GGG + chr4.3:88641640-88641659 MS.gene000607:intron 30.0%
TCTATGCTGATAATAGTTGA+AGG + chr4.3:88640814-88640833 MS.gene000607:intron 30.0%
TGATTCGAATTTGACAGTAA+TGG + chr4.3:88641486-88641505 MS.gene000607:intron 30.0%
TGATTGTATACATAAATCGG+TGG + chr4.3:88641624-88641643 MS.gene000607:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr4.3:88639861-88639880 None:intergenic 30.0%
TGTTGATATATATGAGACAG+AGG - chr4.3:88643168-88643187 None:intergenic 30.0%
TTATGAAGATGAAGAAGATG+AGG + chr4.3:88641802-88641821 MS.gene000607:intron 30.0%
TTTGACACTAAATATACTGC+AGG + chr4.3:88644783-88644802 MS.gene000607:intron 30.0%
! CATGGGCAAAACAATAATTT+TGG + chr4.3:88642278-88642297 MS.gene000607:intron 30.0%
! GTTGAAAATGATGATGATGA+TGG + chr4.3:88641726-88641745 MS.gene000607:intron 30.0%
! TTGTAGTTTTCATACTTAGG+GGG + chr4.3:88642134-88642153 MS.gene000607:intron 30.0%
! TTTTCTTATCTCACACTTCT+CGG + chr4.3:88644620-88644639 MS.gene000607:intron 30.0%
!! AAGTTTTTGAAAGTTAAGGG+CGG + chr4.3:88642167-88642186 MS.gene000607:intron 30.0%
!! ATAATTTTGGTGTGAACTAG+AGG + chr4.3:88642291-88642310 MS.gene000607:intron 30.0%
!! CAAAATTATTGTTTTGCCCA+TGG - chr4.3:88642280-88642299 None:intergenic 30.0%
!! TAAACTCTAAAGCAAAAGCT+TGG - chr4.3:88639570-88639589 None:intergenic 30.0%
!! TAATTTTGGTGTGAACTAGA+GGG + chr4.3:88642292-88642311 MS.gene000607:intron 30.0%
!!! AATGTTTTAGTGTTGAAGAC+TGG + chr4.3:88638585-88638604 MS.gene000607:CDS 30.0%
!!! AGTACTGATGTGTTCTTTTT+TGG - chr4.3:88643817-88643836 None:intergenic 30.0%
!!! GGGACACTTTTTTTAGTAAA+TGG - chr4.3:88639737-88639756 None:intergenic 30.0%
!!! TGGATATAGTGCTTCTTTTT+TGG - chr4.3:88643797-88643816 None:intergenic 30.0%
AAACACAATACAGACACCAT+GGG + chr4.3:88642261-88642280 MS.gene000607:intron 35.0%
AAAGGACCAAATTTGCAATG+GGG + chr4.3:88642090-88642109 MS.gene000607:intron 35.0%
AAAGGACCAAATTTGCAATG+GGG - chr4.3:88642109-88642090 None:intergenic 35.0%
AATGAATGAAAGAAAGCAGG+AGG - chr4.3:88642761-88642780 None:intergenic 35.0%
ACAAGGCCTAAATGGAATAT+TGG - chr4.3:88644568-88644587 None:intergenic 35.0%
ACTTGTGCAGCAATATACAA+AGG - chr4.3:88639457-88639476 None:intergenic 35.0%
AGGCATGGAAAATGAGAATA+AGG - chr4.3:88642338-88642357 None:intergenic 35.0%
ATAATTTGGGGATTTATGGG+TGG - chr4.3:88641248-88641267 None:intergenic 35.0%
ATCTTATGATTCAAGCCACT+AGG + chr4.3:88640233-88640252 MS.gene000607:intron 35.0%
ATGAATCCAGTAAGAACACT+AGG + chr4.3:88644824-88644843 MS.gene000607:CDS 35.0%
ATGAATTAATCTGTGAAGCC+CGG + chr4.3:88643433-88643452 MS.gene000607:intron 35.0%
ATTGCTGCAAACAACTACAA+AGG + chr4.3:88644854-88644873 MS.gene000607:CDS 35.0%
CGTTGCAAATTCTTAAGGTA+TGG + chr4.3:88644413-88644432 MS.gene000607:intron 35.0%
CTACATGTTCATGTTCAGTA+AGG - chr4.3:88643133-88643152 None:intergenic 35.0%
GAAAAGAGGTGAAAAAGAAG+GGG - chr4.3:88642551-88642570 None:intergenic 35.0%
GCAAACAATAAGATCCTGTT+AGG - chr4.3:88644593-88644612 None:intergenic 35.0%
GGAAAATGAGAATAAGGGAA+TGG - chr4.3:88642332-88642351 None:intergenic 35.0%
GGCAATAATTTGGGGATTTA+TGG - chr4.3:88641252-88641271 None:intergenic 35.0%
GGCATGGAAAATGAGAATAA+GGG - chr4.3:88642337-88642356 None:intergenic 35.0%
TAAGATCCTGTTAGGAAACA+AGG - chr4.3:88644585-88644604 None:intergenic 35.0%
TCAGAGTTAAACTCTTCATC+AGG - chr4.3:88644953-88644972 None:intergenic 35.0%
TGAGTTCTTTCTACCATTTC+CGG - chr4.3:88638549-88638568 None:intergenic 35.0%
TGATGAAGAGTTTAACTCTG+AGG + chr4.3:88644952-88644971 MS.gene000607:CDS 35.0%
TTATCAACTGGTCACATTTC+TGG + chr4.3:88639268-88639287 MS.gene000607:CDS 35.0%
TTCGAATTTGACAGTAATGG+TGG + chr4.3:88641489-88641508 MS.gene000607:intron 35.0%
! AAGACATGCTTTTGTCCAAA+AGG + chr4.3:88640651-88640670 MS.gene000607:intron 35.0%
! AGCACTAACAATGTTCCTTT+TGG - chr4.3:88643761-88643780 None:intergenic 35.0%
! CAAACAACTACAAAGGCATA+TGG + chr4.3:88644861-88644880 MS.gene000607:CDS 35.0%
! CAAACTGACTCAAATATTCC+GGG + chr4.3:88639905-88639924 MS.gene000607:intron 35.0%
! CCAAACTGACTCAAATATTC+CGG + chr4.3:88639904-88639923 MS.gene000607:intron 35.0%
! GCATTGATGTATAACACTGA+TGG - chr4.3:88643728-88643747 None:intergenic 35.0%
! GTATATTGCTGCACAAGTTT+TGG + chr4.3:88639459-88639478 MS.gene000607:CDS 35.0%
! GTTTTTCATCCATTCATGAG+TGG + chr4.3:88639514-88639533 MS.gene000607:CDS 35.0%
! TGATAATAGTTGAAGGCATG+TGG + chr4.3:88640821-88640840 MS.gene000607:intron 35.0%
! TGTGCTTCTTTTACTCTCAA+AGG + chr4.3:88639490-88639509 MS.gene000607:CDS 35.0%
! TTTTAGCCCCATTGCAAATT+TGG + chr4.3:88640973-88640992 MS.gene000607:intron 35.0%
! TTTTAGCCCCATTGCAAATT+TGG - chr4.3:88640992-88640973 None:intergenic 35.0%
!! AAATGTACCTTTTTGGCAAG+AGG - chr4.3:88638668-88638687 None:intergenic 35.0%
!! AAGTAATGATTGGTGCTGAA+AGG - chr4.3:88640208-88640227 None:intergenic 35.0%
!! AATGTACCTTTTTGGCAAGA+GGG - chr4.3:88638667-88638686 None:intergenic 35.0%
!! AATTTTGGTGTGAACTAGAG+GGG + chr4.3:88642293-88642312 MS.gene000607:intron 35.0%
!! AGTAATGATTGGTGCTGAAA+GGG - chr4.3:88640207-88640226 None:intergenic 35.0%
!! GAAAATGATGATGATGATGG+AGG + chr4.3:88641729-88641748 MS.gene000607:intron 35.0%
!! TCCTTTTTGCCAATTTTGAC+CGG + chr4.3:88640996-88641015 MS.gene000607:intron 35.0%
!! TCCTTTTTGCCAATTTTGAC+CGG - chr4.3:88641015-88640996 None:intergenic 35.0%
!!! CGTCATCCATTTTGAAGTAT+CGG + chr4.3:88644081-88644100 MS.gene000607:intron 35.0%
!!! GTCATCCATTTTGAAGTATC+GGG + chr4.3:88644082-88644101 MS.gene000607:intron 35.0%
!!! TCATCCATTTTGAAGTATCG+GGG + chr4.3:88644083-88644102 MS.gene000607:intron 35.0%
AAATCAAGATACGATACGGC+TGG + chr4.3:88643515-88643534 MS.gene000607:intron 40.0%
AAATCTGAGAGAACCGGAAA+TGG + chr4.3:88638533-88638552 MS.gene000607:CDS 40.0%
AAGGCTAAGATGAGAGTCAA+TGG + chr4.3:88640670-88640689 MS.gene000607:intron 40.0%
AATCAAGATACGATACGGCT+GGG + chr4.3:88643516-88643535 MS.gene000607:intron 40.0%
ACACAAGTATCCGTGAGTAT+CGG + chr4.3:88643933-88643952 MS.gene000607:intron 40.0%
ACCGGTCAAAATTGGCAAAA+AGG + chr4.3:88642072-88642091 MS.gene000607:intron 40.0%
ACCGGTCAAAATTGGCAAAA+AGG - chr4.3:88642091-88642072 None:intergenic 40.0%
ACGGTTCCTTCAGTTGAATA+TGG + chr4.3:88639544-88639563 MS.gene000607:CDS 40.0%
AGAAAAGATGAGAAGGATGG+TGG - chr4.3:88642479-88642498 None:intergenic 40.0%
AGAGAAGAAAGAGAAAGGCA+TGG - chr4.3:88642353-88642372 None:intergenic 40.0%
AGAGCAAGTGACTTTAGGTA+AGG - chr4.3:88638627-88638646 None:intergenic 40.0%
AGAGTAATGGTTGTTGGTGT+TGG - chr4.3:88642612-88642631 None:intergenic 40.0%
ATACTCTTCGGATACGTATC+GGG + chr4.3:88644013-88644032 MS.gene000607:intron 40.0%
ATGCTCAACATACTCATTGC+TGG + chr4.3:88644201-88644220 MS.gene000607:CDS 40.0%
ATGGGTCAGATATTCCTGAA+CGG - chr4.3:88639718-88639737 None:intergenic 40.0%
CAAACACAATACAGACACCA+TGG + chr4.3:88642260-88642279 MS.gene000607:intron 40.0%
CCGGAATATTTGAGTCAGTT+TGG - chr4.3:88639907-88639926 None:intergenic 40.0%
CTGCATTAAAACACTTCCCA+TGG + chr4.3:88639326-88639345 MS.gene000607:CDS 40.0%
GAAAAGATGAGAAGGATGGT+GGG - chr4.3:88642478-88642497 None:intergenic 40.0%
GAAACACTAATTGGATGTGC+TGG + chr4.3:88639214-88639233 MS.gene000607:CDS 40.0%
GATACTCTTCGGATACGTAT+CGG + chr4.3:88644012-88644031 MS.gene000607:intron 40.0%
GGAAGAAAAGATGAGAAGGA+TGG - chr4.3:88642482-88642501 None:intergenic 40.0%
GTTAGGAAACAAGGCCTAAA+TGG - chr4.3:88644576-88644595 None:intergenic 40.0%
TAACATGATGCAATGCAGGT+GGG + chr4.3:88644144-88644163 MS.gene000607:intron 40.0%
TAGAACCAATCATGTGCTTG+AGG + chr4.3:88639997-88640016 MS.gene000607:intron 40.0%
TAGTTGTTTGCAGCAATTGC+TGG - chr4.3:88644851-88644870 None:intergenic 40.0%
TATACTCACAGCTCTTGTGT+CGG - chr4.3:88639635-88639654 None:intergenic 40.0%
TATCTCATAGCCCCTATTCT+TGG + chr4.3:88644887-88644906 MS.gene000607:CDS 40.0%
TGCAATGGGGCTAAAACTTA+GGG + chr4.3:88642103-88642122 MS.gene000607:intron 40.0%
TGCAATGGGGCTAAAACTTA+GGG - chr4.3:88642122-88642103 None:intergenic 40.0%
TGCAGCAAATGAAATCGTGA+CGG - chr4.3:88639311-88639330 None:intergenic 40.0%
TGCTCAACATACTCATTGCT+GGG + chr4.3:88644202-88644221 MS.gene000607:CDS 40.0%
TTGCAATGGGGCTAAAACTT+AGG + chr4.3:88642102-88642121 MS.gene000607:intron 40.0%
TTGCAATGGGGCTAAAACTT+AGG - chr4.3:88642121-88642102 None:intergenic 40.0%
TTTCATCCATTCATGAGTGG+TGG + chr4.3:88639517-88639536 MS.gene000607:CDS 40.0%
! AATAGTTGAAGGCATGTGGT+GGG + chr4.3:88640825-88640844 MS.gene000607:intron 40.0%
! ATTGAACAAAGCTAGCCTAG+TGG - chr4.3:88640251-88640270 None:intergenic 40.0%
! CAGCTTTTGTCCTCACTAAA+TGG + chr4.3:88640707-88640726 MS.gene000607:intron 40.0%
! CTCACACTTCTCGGATATTT+TGG + chr4.3:88644629-88644648 MS.gene000607:intron 40.0%
! GATTTGAAGCCACCAAAAAG+AGG - chr4.3:88638518-88638537 None:intergenic 40.0%
! TAATAGTTGAAGGCATGTGG+TGG + chr4.3:88640824-88640843 MS.gene000607:intron 40.0%
! TAGTGTTGAAGACTGGACTT+TGG + chr4.3:88638592-88638611 MS.gene000607:CDS 40.0%
! TGGACAAAAGCATGTCTTCT+TGG - chr4.3:88640649-88640668 None:intergenic 40.0%
!! AACACTGATGGTGCTCTTTT+TGG - chr4.3:88643716-88643735 None:intergenic 40.0%
!! ATTTTCCCGTATCGACGTAT+CGG - chr4.3:88643490-88643509 None:intergenic 40.0%
!! GTTGTGTTCGATTTTGACGA+CGG + chr4.3:88642832-88642851 MS.gene000607:intron 40.0%
!! TAATGGTTGTTGGTGTTGGA+CGG - chr4.3:88642608-88642627 None:intergenic 40.0%
!! TCATCTTCTGAAACTTCCAG+GGG - chr4.3:88644993-88645012 None:intergenic 40.0%
!! TCTTCTTGGTCGACTCTTTT+TGG - chr4.3:88640635-88640654 None:intergenic 40.0%
!! TGACTCTCATCTTAGCCTTT+TGG - chr4.3:88640669-88640688 None:intergenic 40.0%
!! TTGGTTTTCTAGACATGGAG+TGG + chr4.3:88641702-88641721 MS.gene000607:intron 40.0%
!! TTTAGGCCTTGTTTCCTAAC+AGG + chr4.3:88644576-88644595 MS.gene000607:intron 40.0%
!!! CTTTTGGTTCACAATTGCAG+TGG - chr4.3:88639182-88639201 None:intergenic 40.0%
!!! GACACATGTCACTTTTGCAT+TGG - chr4.3:88641855-88641874 None:intergenic 40.0%
AAAATATACTCCCTCCGTCC+CGG - chr4.3:88639926-88639945 None:intergenic 45.0%
ACCATTACTCTCTTCCCTCT+CGG + chr4.3:88642621-88642640 MS.gene000607:intron 45.0%
AGATAAGCAGAGGAGTCACA+GGG + chr4.3:88642946-88642965 MS.gene000607:intron 45.0%
ATGTTAATGTGCTACGAGCC+TGG - chr4.3:88643631-88643650 None:intergenic 45.0%
ATTTGGGGATTTATGGGTGG+AGG - chr4.3:88641245-88641264 None:intergenic 45.0%
CAATGGGGCTAAAACTTAGG+GGG + chr4.3:88642105-88642124 MS.gene000607:intron 45.0%
CAATGGGGCTAAAACTTAGG+GGG - chr4.3:88642124-88642105 None:intergenic 45.0%
CACAAGTATCCGTGAGTATC+GGG + chr4.3:88643934-88643953 MS.gene000607:intron 45.0%
CATATATACTCCCTCCGTTC+AGG + chr4.3:88639701-88639720 MS.gene000607:intron 45.0%
CCAATCATGTGCTTGAGGAT+TGG + chr4.3:88640002-88640021 MS.gene000607:intron 45.0%
CCAATCCTCAAGCACATGAT+TGG - chr4.3:88640005-88640024 None:intergenic 45.0%
CGGGAAGAGAAGAAAGAGAA+AGG - chr4.3:88642358-88642377 None:intergenic 45.0%
CTATAAACTCTGCTCCAACC+TGG - chr4.3:88639129-88639148 None:intergenic 45.0%
CTGACTCAAATATTCCGGGA+CGG + chr4.3:88639909-88639928 MS.gene000607:intron 45.0%
GAAGAGAACGAGAGTGAAAG+AGG - chr4.3:88641217-88641236 None:intergenic 45.0%
GAAGCCCCGATACTTCAAAA+TGG - chr4.3:88644090-88644109 None:intergenic 45.0%
GAATGAAAGAAAGCAGGAGG+TGG - chr4.3:88642758-88642777 None:intergenic 45.0%
GAGTATGTTGAGCATGACAG+TGG - chr4.3:88644196-88644215 None:intergenic 45.0%
GCAATGGGGCTAAAACTTAG+GGG + chr4.3:88642104-88642123 MS.gene000607:intron 45.0%
GCAATGGGGCTAAAACTTAG+GGG - chr4.3:88642123-88642104 None:intergenic 45.0%
GCTTGGCCATATTCAACTGA+AGG - chr4.3:88639553-88639572 None:intergenic 45.0%
GGACGGAAGAAAAGATGAGA+AGG - chr4.3:88642486-88642505 None:intergenic 45.0%
GGAGAGAAGAAGAGGTTAAC+GGG - chr4.3:88642377-88642396 None:intergenic 45.0%
GGCAAAGAGCAAGTGACTTT+AGG - chr4.3:88638632-88638651 None:intergenic 45.0%
GGCTTCAAATCTGAGAGAAC+CGG + chr4.3:88638527-88638546 MS.gene000607:CDS 45.0%
GGGAAGAGAGTAATGGTTGT+TGG - chr4.3:88642618-88642637 None:intergenic 45.0%
GGGAGAGAAGAAGAGGTTAA+CGG - chr4.3:88642378-88642397 None:intergenic 45.0%
GGTGAAAAAGAAGGGGTTGA+TGG - chr4.3:88642544-88642563 None:intergenic 45.0%
GGTGGTGAAATGTTGTTGCT+GGG - chr4.3:88642398-88642417 None:intergenic 45.0%
GTAACATGATGCAATGCAGG+TGG + chr4.3:88644143-88644162 MS.gene000607:intron 45.0%
GTCAGATATTCCTGAACGGA+GGG - chr4.3:88639714-88639733 None:intergenic 45.0%
GTGGTAACATGATGCAATGC+AGG + chr4.3:88644140-88644159 MS.gene000607:intron 45.0%
TAGTGTTTAGGAGGATGGGA+CGG - chr4.3:88642503-88642522 None:intergenic 45.0%
TCCGTATCGTATCTCGTATC+CGG - chr4.3:88643455-88643474 None:intergenic 45.0%
TGGCTAGTGTTTAGGAGGAT+GGG - chr4.3:88642507-88642526 None:intergenic 45.0%
TGTGAACTAGAGGGGTAGTT+TGG + chr4.3:88642301-88642320 MS.gene000607:intron 45.0%
TTCATTGAAGCTCCAGTTGC+AGG - chr4.3:88644809-88644828 None:intergenic 45.0%
! ATGTGCTTGAGGATTGGTGT+AGG + chr4.3:88640008-88640027 MS.gene000607:intron 45.0%
! ATTCATGAGTGGTGGTGTCA+CGG + chr4.3:88639525-88639544 MS.gene000607:CDS 45.0%
! CAGGTTGGAGCAGAGTTTAT+AGG + chr4.3:88639127-88639146 MS.gene000607:intron 45.0%
! CTTTTCCACTCCACACTTCT+CGG - chr4.3:88644748-88644767 None:intergenic 45.0%
! GAAGACTGGACTTTGGAAGA+TGG + chr4.3:88638599-88638618 MS.gene000607:CDS 45.0%
! GGATACGTATCGGGAAGTAT+CGG + chr4.3:88644022-88644041 MS.gene000607:intron 45.0%
! TGGTGGTGAAATGTTGTTGC+TGG - chr4.3:88642399-88642418 None:intergenic 45.0%
!! AAGAAGGGGTTGATGGTTGA+TGG - chr4.3:88642537-88642556 None:intergenic 45.0%
!! AAGCGTTGACCGGTCAAAAT+TGG - chr4.3:88641008-88641027 None:intergenic 45.0%
!! ACCAAGAGCACCAAGAATAG+GGG - chr4.3:88644900-88644919 None:intergenic 45.0%
!! AGAGGATGGTGGAAGAAAAG+AGG - chr4.3:88642565-88642584 None:intergenic 45.0%
!! CACCAAGAGCACCAAGAATA+GGG - chr4.3:88644901-88644920 None:intergenic 45.0%
!! CATGTTTGTTGTCACTGCAG+TGG + chr4.3:88639606-88639625 MS.gene000607:CDS 45.0%
!! CTATTCTTGGTGCTCTTGGT+GGG + chr4.3:88644900-88644919 MS.gene000607:CDS 45.0%
!! GATACGTATCGGGAAGTATC+GGG + chr4.3:88644023-88644042 MS.gene000607:intron 45.0%
!! GGACGGAGGGAGTATATTTT+TGG + chr4.3:88639926-88639945 MS.gene000607:intron 45.0%
!! GGTTGATGGTTGATGGTTGA+CGG - chr4.3:88642530-88642549 None:intergenic 45.0%
!! TATTCTTGGTGCTCTTGGTG+GGG + chr4.3:88644901-88644920 MS.gene000607:CDS 45.0%
!! TCGGAGGTTTCTGGTTTGTT+CGG - chr4.3:88644729-88644748 None:intergenic 45.0%
!! TGTGAGTTCTAGATCCGAGA+GGG - chr4.3:88642638-88642657 None:intergenic 45.0%
!!! TTTCTGGTGTCGTGCTTTTC+TGG - chr4.3:88641403-88641422 None:intergenic 45.0%
!! AAAAAAAAAACAATTATTAA+AGG + chr4.3:88640369-88640388 MS.gene000607:intron 5.0%
!! TAAATAAAAAAATGATTATA+TGG - chr4.3:88641080-88641099 None:intergenic 5.0%
!! TAATTAAAAAAATGATTATA+TGG + chr4.3:88641991-88642010 MS.gene000607:intron 5.0%
!! TTAAATATTATAAAGAATTA+CGG + chr4.3:88638770-88638789 MS.gene000607:intron 5.0%
AATGCAGGTGGGAGAACTTG+CGG + chr4.3:88644155-88644174 MS.gene000607:intron 50.0%
ACTCAAATATTCCGGGACGG+AGG + chr4.3:88639912-88639931 MS.gene000607:intron 50.0%
AGAGACTGAGTGAGAATGGG+CGG + chr4.3:88642886-88642905 MS.gene000607:intron 50.0%
AGGGAGAGACTGAGTGAGAA+TGG + chr4.3:88642882-88642901 MS.gene000607:intron 50.0%
ATATACTGCAGGCCTGCAAC+TGG + chr4.3:88644794-88644813 MS.gene000607:intron 50.0%
ATTGGATGTGCTGGAGCTAC+TGG + chr4.3:88639223-88639242 MS.gene000607:CDS 50.0%
CCCGGATACGAGATACGATA+CGG + chr4.3:88643451-88643470 MS.gene000607:intron 50.0%
CCGTATCGTATCTCGTATCC+GGG - chr4.3:88643454-88643473 None:intergenic 50.0%
CTCAAATATTCCGGGACGGA+GGG + chr4.3:88639913-88639932 MS.gene000607:intron 50.0%
GAACGAGAGTGAAAGAGGAG+AGG - chr4.3:88641212-88641231 None:intergenic 50.0%
GAGATAAGCAGAGGAGTCAC+AGG + chr4.3:88642945-88642964 MS.gene000607:intron 50.0%
GCAAATGAAATCGTGACGGC+TGG - chr4.3:88639307-88639326 None:intergenic 50.0%
GCTGGTCCTAGTGTTCTTAC+TGG - chr4.3:88644833-88644852 None:intergenic 50.0%
GGGAGAGACTGAGTGAGAAT+GGG + chr4.3:88642883-88642902 MS.gene000607:intron 50.0%
GGTCAGATATTCCTGAACGG+AGG - chr4.3:88639715-88639734 None:intergenic 50.0%
GGTGCGAAAGAGATAAGCAG+AGG + chr4.3:88642936-88642955 MS.gene000607:intron 50.0%
GTGACACCACCACTCATGAA+TGG - chr4.3:88639526-88639545 None:intergenic 50.0%
GTGGAGACTGAGAAACGAGA+GGG + chr4.3:88642863-88642882 MS.gene000607:intron 50.0%
GTGGCTAGTGTTTAGGAGGA+TGG - chr4.3:88642508-88642527 None:intergenic 50.0%
GTGGTTGTGACTGACAAGGA+CGG - chr4.3:88642440-88642459 None:intergenic 50.0%
GTTGACGGTGGCTAGTGTTT+AGG - chr4.3:88642515-88642534 None:intergenic 50.0%
TCCGAGAGGGAAGAGAGTAA+TGG - chr4.3:88642625-88642644 None:intergenic 50.0%
TCCTGTCCCTCTTGCCAAAA+AGG + chr4.3:88638658-88638677 MS.gene000607:CDS 50.0%
TGAAAGAAAGCAGGAGGTGG+TGG - chr4.3:88642755-88642774 None:intergenic 50.0%
TGTTGCTGGGAGAGAAGAAG+AGG - chr4.3:88642385-88642404 None:intergenic 50.0%
! ACTCCTGGTGCTCCTCTTTT+TGG + chr4.3:88638503-88638522 MS.gene000607:CDS 50.0%
! ACTGCACCGATACGTCGATA+CGG + chr4.3:88643481-88643500 MS.gene000607:intron 50.0%
! CGGGACGTATCGGAAAGTAT+CGG + chr4.3:88643953-88643972 MS.gene000607:intron 50.0%
! TGAAGGCATGTGGTGGGATT+TGG + chr4.3:88640831-88640850 MS.gene000607:intron 50.0%
! TTTTGGCAAGAGGGACAGGA+GGG - chr4.3:88638658-88638677 None:intergenic 50.0%
!! ACCTTTTTGGCAAGAGGGAC+AGG - chr4.3:88638662-88638681 None:intergenic 50.0%
!! AGGCGTTGACCGGTCAAAAT+TGG + chr4.3:88642064-88642083 MS.gene000607:intron 50.0%
!! CAGGGGTAGAAGGTACTGAT+GGG - chr4.3:88638472-88638491 None:intergenic 50.0%
!! CCACCAAGAGCACCAAGAAT+AGG - chr4.3:88644902-88644921 None:intergenic 50.0%
!! CCTATTCTTGGTGCTCTTGG+TGG + chr4.3:88644899-88644918 MS.gene000607:CDS 50.0%
!! GATTTTGACGACGGCGAGTT+TGG + chr4.3:88642841-88642860 MS.gene000607:intron 50.0%
!! GTGTGAGTTCTAGATCCGAG+AGG - chr4.3:88642639-88642658 None:intergenic 50.0%
!! TGATGGTTGATGGTTGACGG+TGG - chr4.3:88642527-88642546 None:intergenic 50.0%
!! TTGAAGTATCGGGGCTTCAC+AGG + chr4.3:88644092-88644111 MS.gene000607:intron 50.0%
!! TTTTTGGCAAGAGGGACAGG+AGG - chr4.3:88638659-88638678 None:intergenic 50.0%
AACGGATCTCCGTTGACGAG+TGG - chr4.3:88642682-88642701 None:intergenic 55.0%
ACGGATCTCCGTTGACGAGT+GGG - chr4.3:88642681-88642700 None:intergenic 55.0%
ACTCACAGCTCTTGTGTCGG+TGG - chr4.3:88639632-88639651 None:intergenic 55.0%
AGTGGGAGATGAGGATGCGT+CGG - chr4.3:88642664-88642683 None:intergenic 55.0%
ATGCAGGTGGGAGAACTTGC+GGG + chr4.3:88644156-88644175 MS.gene000607:intron 55.0%
CCACACTTCTCGGAGGTTTC+TGG - chr4.3:88644738-88644757 None:intergenic 55.0%
CCAGAAACCTCCGAGAAGTG+TGG + chr4.3:88644735-88644754 MS.gene000607:intron 55.0%
CCATCACCGTCTCTGCAACT+CGG - chr4.3:88642915-88642934 None:intergenic 55.0%
CCGATACGTCCCGATACTCA+CGG - chr4.3:88643946-88643965 None:intergenic 55.0%
CCTCATCTCCCACTCGTCAA+CGG + chr4.3:88642670-88642689 MS.gene000607:intron 55.0%
GAAACTTCCAGGGGCAGAAG+AGG - chr4.3:88644984-88645003 None:intergenic 55.0%
GACGGTGGCTAGTGTTTAGG+AGG - chr4.3:88642512-88642531 None:intergenic 55.0%
GGTGGAGACTGAGAAACGAG+AGG + chr4.3:88642862-88642881 MS.gene000607:intron 55.0%
GTGACTGACAAGGACGGTGT+TGG - chr4.3:88642434-88642453 None:intergenic 55.0%
GTTAAAGCCTCTTCTGCCCC+TGG + chr4.3:88644974-88644993 MS.gene000607:CDS 55.0%
TATCGGTGCAGGATACGCAG+GGG + chr4.3:88644050-88644069 MS.gene000607:intron 55.0%
TGGGGATTTATGGGTGGAGG+AGG - chr4.3:88641242-88641261 None:intergenic 55.0%
TTCCACTCCACACTTCTCGG+AGG - chr4.3:88644745-88644764 None:intergenic 55.0%
TTGACCGGTCAACGCTTACG+TGG + chr4.3:88641011-88641030 MS.gene000607:intron 55.0%
TTTGACGACGGCGAGTTTGG+TGG + chr4.3:88642844-88642863 MS.gene000607:intron 55.0%
TTTGGCAAGAGGGACAGGAG+GGG - chr4.3:88638657-88638676 None:intergenic 55.0%
! AACCTCCGAGAAGTGTGGAG+TGG + chr4.3:88644740-88644759 MS.gene000607:intron 55.0%
! ACTGACAAGGACGGTGTTGG+TGG - chr4.3:88642431-88642450 None:intergenic 55.0%
! AGTTGCAGAGACGGTGATGG+TGG + chr4.3:88642915-88642934 MS.gene000607:intron 55.0%
! CCTGGTGCTCCTCTTTTTGG+TGG + chr4.3:88638506-88638525 MS.gene000607:CDS 55.0%
! CTGCACCGATACGTCGATAC+GGG + chr4.3:88643482-88643501 MS.gene000607:intron 55.0%
! GTATCGGTGCAGGATACGCA+GGG + chr4.3:88644049-88644068 MS.gene000607:intron 55.0%
!! AGGAGTACCTGGTGTTGCAG+GGG - chr4.3:88638489-88638508 None:intergenic 55.0%
!! CAGGAGTACCTGGTGTTGCA+GGG - chr4.3:88638490-88638509 None:intergenic 55.0%
!! CCACCAAAAAGAGGAGCACC+AGG - chr4.3:88638509-88638528 None:intergenic 55.0%
!! CCGTGAGTATCGGGACGTAT+CGG + chr4.3:88643943-88643962 MS.gene000607:intron 55.0%
!! GATGAGAAGGATGGTGGGTG+CGG - chr4.3:88642473-88642492 None:intergenic 55.0%
!! GCAGGGGTAGAAGGTACTGA+TGG - chr4.3:88638473-88638492 None:intergenic 55.0%
!! GCCCCTATTCTTGGTGCTCT+TGG + chr4.3:88644896-88644915 MS.gene000607:CDS 55.0%
!! GGGAAGTATCGGGCAGGTAT+CGG + chr4.3:88644033-88644052 MS.gene000607:intron 55.0%
!! TGGTTGTTGGTGTTGGACGG+AGG - chr4.3:88642605-88642624 None:intergenic 55.0%
AGAACTTGCGGGAATCGCGG+TGG + chr4.3:88644167-88644186 MS.gene000607:CDS 60.0%
CCGAGTTGCAGAGACGGTGA+TGG + chr4.3:88642912-88642931 MS.gene000607:intron 60.0%
CCGTTGACGAGTGGGAGATG+AGG - chr4.3:88642673-88642692 None:intergenic 60.0%
CCTGCAACACCAGGTACTCC+TGG + chr4.3:88638488-88638507 MS.gene000607:CDS 60.0%
CCTTCTACCCCTGCAACACC+AGG + chr4.3:88638479-88638498 MS.gene000607:CDS 60.0%
GAACTTGCGGGAATCGCGGT+GGG + chr4.3:88644168-88644187 MS.gene000607:CDS 60.0%
GGCGGTGGTTGTGACTGACA+AGG - chr4.3:88642444-88642463 None:intergenic 60.0%
GGGAGAACTTGCGGGAATCG+CGG + chr4.3:88644164-88644183 MS.gene000607:CDS 60.0%
GGTCCACGATGGGTCTCAGA+CGG - chr4.3:88642710-88642729 None:intergenic 60.0%
TCACCGTCTCTGCAACTCGG+TGG - chr4.3:88642912-88642931 None:intergenic 60.0%
TTGACCGGTCAACGCCTACG+TGG - chr4.3:88642061-88642080 None:intergenic 60.0%
TTGGACGGAGGAGAGGAGGA+TGG - chr4.3:88642593-88642612 None:intergenic 60.0%
TTGGCAAGAGGGACAGGAGG+GGG - chr4.3:88638656-88638675 None:intergenic 60.0%
! GAGAGGAGGATGGTGGTGAG+AGG - chr4.3:88642583-88642602 None:intergenic 60.0%
! GGAGGATGGTGGTGAGAGGA+TGG - chr4.3:88642579-88642598 None:intergenic 60.0%
! GGATGGTGGTGAGAGGATGG+TGG - chr4.3:88642576-88642595 None:intergenic 60.0%
! GTTAATGTTGCCGGCGCTGG+AGG - chr4.3:88642731-88642750 None:intergenic 60.0%
!! AGAAGGATGGTGGGTGCGGT+GGG - chr4.3:88642469-88642488 None:intergenic 60.0%
!! AGAGGAGCACCAGGAGTACC+TGG - chr4.3:88638500-88638519 None:intergenic 60.0%
!! CCAGGAGTACCTGGTGTTGC+AGG - chr4.3:88638491-88638510 None:intergenic 60.0%
!! CCTGGTGTTGCAGGGGTAGA+AGG - chr4.3:88638482-88638501 None:intergenic 60.0%
!! CGTATCGGGAAGTATCGGGC+AGG + chr4.3:88644027-88644046 MS.gene000607:intron 60.0%
!! CGTGCCACGTAAGCGTTGAC+CGG - chr4.3:88641018-88641037 None:intergenic 60.0%
!! GACAAGGACGGTGTTGGTGG+TGG - chr4.3:88642428-88642447 None:intergenic 60.0%
!! GACGGTGTTGGTGGTGGTTG+TGG - chr4.3:88642422-88642441 None:intergenic 60.0%
!! GGTATCGGTGCAGGATACGC+AGG + chr4.3:88644048-88644067 MS.gene000607:intron 60.0%
!! GGTGTTGGTGGTGGTTGTGG+TGG - chr4.3:88642419-88642438 None:intergenic 60.0%
!! GTTGGTGGTGGTTGTGGTGG+TGG - chr4.3:88642416-88642435 None:intergenic 60.0%
!! GTTGGTGTTGGACGGAGGAG+AGG - chr4.3:88642600-88642619 None:intergenic 60.0%
!! TATCGGGCAGGTATCGGTGC+AGG + chr4.3:88644039-88644058 MS.gene000607:intron 60.0%
ACACACGTGGCGTGCCACGT+AGG + chr4.3:88642044-88642063 MS.gene000607:intron 65.0%
CCACGATGGGTCTCAGACGG+CGG - chr4.3:88642707-88642726 None:intergenic 65.0%
CGGCCACCGAGTTGCAGAGA+CGG + chr4.3:88642906-88642925 MS.gene000607:intron 65.0%
GACGGAGGAGAGGAGGATGG+TGG - chr4.3:88642590-88642609 None:intergenic 65.0%
GGGTCTCAGACGGCGGTGAA+CGG - chr4.3:88642700-88642719 None:intergenic 65.0%
! GGTGTTGGACGGAGGAGAGG+AGG - chr4.3:88642597-88642616 None:intergenic 65.0%
!! CGTGCCACGTAGGCGTTGAC+CGG + chr4.3:88642054-88642073 MS.gene000607:intron 65.0%
!! CTTGGTGCTCTTGGTGGGGC+AGG + chr4.3:88644905-88644924 MS.gene000607:CDS 65.0%
!! GAGAAGGATGGTGGGTGCGG+TGG - chr4.3:88642470-88642489 None:intergenic 65.0%
CCATCGTGGACCTCCAGCGC+CGG + chr4.3:88642718-88642737 MS.gene000607:intron 70.0%
GCAAGAGGGACAGGAGGGGG+AGG - chr4.3:88638653-88638672 None:intergenic 70.0%
! CCGCCGTCTGAGACCCATCG+TGG + chr4.3:88642704-88642723 MS.gene000607:intron 70.0%
! CGGCGCTGGAGGTCCACGAT+GGG - chr4.3:88642720-88642739 None:intergenic 70.0%
!! GGATGGTGGGTGCGGTGGGA+CGG - chr4.3:88642465-88642484 None:intergenic 70.0%
! CCGGCGCTGGAGGTCCACGA+TGG - chr4.3:88642721-88642740 None:intergenic 75.0%
! TGGTGGGTGCGGTGGGACGG+CGG - chr4.3:88642462-88642481 None:intergenic 75.0%
! TGGGTGCGGTGGGACGGCGG+TGG - chr4.3:88642459-88642478 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 88638452 88645012 88638452 ID=MS.gene000607
chr4.3 mRNA 88638452 88645012 88638452 ID=MS.gene000607.t1;Parent=MS.gene000607
chr4.3 exon 88638452 88638679 88638452 ID=MS.gene000607.t1.exon1;Parent=MS.gene000607.t1
chr4.3 CDS 88638452 88638679 88638452 ID=cds.MS.gene000607.t1;Parent=MS.gene000607.t1
chr4.3 exon 88639130 88639354 88639130 ID=MS.gene000607.t1.exon2;Parent=MS.gene000607.t1
chr4.3 CDS 88639130 88639354 88639130 ID=cds.MS.gene000607.t1;Parent=MS.gene000607.t1
chr4.3 exon 88639451 88639645 88639451 ID=MS.gene000607.t1.exon3;Parent=MS.gene000607.t1
chr4.3 CDS 88639451 88639645 88639451 ID=cds.MS.gene000607.t1;Parent=MS.gene000607.t1
chr4.3 exon 88644162 88644223 88644162 ID=MS.gene000607.t1.exon4;Parent=MS.gene000607.t1
chr4.3 CDS 88644162 88644223 88644162 ID=cds.MS.gene000607.t1;Parent=MS.gene000607.t1
chr4.3 exon 88644805 88645012 88644805 ID=MS.gene000607.t1.exon5;Parent=MS.gene000607.t1
chr4.3 CDS 88644805 88645012 88644805 ID=cds.MS.gene000607.t1;Parent=MS.gene000607.t1
Gene Sequence

>MS.gene000607

ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGCTTCAAATCTGAGAGAACCGGAAATGGTAGAAAGAACTCACTCCTCAAGAATTTAAAATGTTTTAGTGTTGAAGACTGGACTTTGGAAGATGGAGCCTTACCTAAAGTCACTTGCTCTTTGCCTCCCCCTCCTGTCCCTCTTGCCAAAAAGGTACATTTAATTAACATATCATATCATATATGATAATAAATCATGCATCCATACATATGCAATGATTTAAATCACATTCACATCTTAATTTTAAATATTATAAAGAATTACGGTGAAATACAGCTTAGTAGTCAAGAATACATTAAATTTATGTTTGGAATCACTCTGAGTTTAACGAAATTATAGTAACTTGATTTTCGTAGAAGTTATAAAGTATAACTTTTATCAAAATCTGGTGACGCTGTGATTCTGCCAAATTCATCCTAATTTCAACATGTACTAAAACTTGATGTCACAATTCAAATAGTAGTTGTGGATTTCTTTTAAATTTTATAATCTTGCATAGTTGCATACATATAAACAATTATATCAAGTACATCATTGGTAAAAAAGTTAATAGGGTTCCTATTTTTGATATATTGATCTGTTGATTAATGTAATTATTACCAGGTTGGAGCAGAGTTTATAGGCACATACATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAGATACATAACTCAGAAACACTAATTGGATGTGCTGGAGCTACTGGACTTGCTGTTATGATCATAATTTTATCAACTGGTCACATTTCTGGTGCTCATCTTAATCCAGCCGTCACGATTTCATTTGCTGCATTAAAACACTTCCCATGGAAAAATGTAACAACAAAAAAAAACCTTAAATTCATCTTCTAATTCAATTTTTAGACATGTTAATTAAAAAGTGCTTATTTTAATTTTGTGAATTAATTTTAGGTACCTTTGTATATTGCTGCACAAGTTTTGGCATCAATATGTGCTTCTTTTACTCTCAAAGGAGTTTTTCATCCATTCATGAGTGGTGGTGTCACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATCAGTTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGAGTATAATTATTTATCATATATCCATATTCTATTATAAGAACTTTAGTCTTGCATATATACTCCCTCCGTTCAGGAATATCTGACCCATTTACTAAAAAAAGTGTCCCAAAATAACTGAGCTATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACTCTAATTAATACTACTTTCATCATTCTCAATTCAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAACCAAACTGACTCAAATATTCCGGGACGGAGGGAGTATATTTTTGGTTTGAATTGAATGCTATATGTATATGTATATACACTAGTAAAATATGTTAGAACCAATCATGTGCTTGAGGATTGGTGTAGGACAATAGTCTATACTTTGTTTAAGAAAATAAGGAAATGCAAATAAACAAGAGGAACTAAAATCAGCAAATATATATATATATAATTAGAAACAAAGTACAGTATATAATTAGAAACAAATAAAGAGGGTACAGAAATGTATGTAAGCATGCAGTTTATGATTTGTAATTAGCACCCTTTCAGCACCAATCATTACTTTTGATATCTTATGATTCAAGCCACTAGGCTAGCTTTGTTCAATCAAGTATTATTAACTCATTAAGTAAGTACAAAAACAACAAAAAAAAAAATTATAAAAGAAAAATTAATAGTTTACTCCATCAGAAATTGATTTCACAAAAAAAAAAAACAATTATTAAAGGTACAATTGTATATATGGATATATTAAGAATATATATTTTTTCATAATAAATTTCAAAAAAATACTAACATATGTCCTTATGGTATTTGTTAGTGTACTTAAGATAAAAAATTTATATTGTAAATTAAGTTTTTTATTTTTCAAAAAAATAAAATTGATATTTTTTTAAACATGATTATTATTTATAAATTTCTCATCATGTACTCTTAAATTATAAGTTAGCATGACCTTAAAATTGAATCCAAAAAGAGTCGACCAAGAAGACATGCTTTTGTCCAAAAGGCTAAGATGAGAGTCAATGGAAAAGATATGTCAGCAGCTTTTGTCCTCACTAAATGGATATATAAAATTCGTTTTTTGTGACCACTAATTGTATCAATGAACATGCATACTGCATCCATGTTTTGCAGTGAGATATTTGACTCTATGCTGATAATAGTTGAAGGCATGTGGTGGGATTTGGAATCTTTGCTTGTTGCATCAAATAATAACTAGGCTAAAGTGCACTTTTTCCCTCTTAACTTTTAAAAACTTGCAATTTTGGTACCCTAAGTATGAAAATTACAATTTTGGCCCCCTAAGTTTTAGCCCCATTGCAAATTTGGTCCTTTTTGCCAATTTTGACCGGTCAACGCTTACGTGGCACGCCACGTATGTAATTATTTAATTAAAAAATTAAAAAAAAACCATATAATCATTTTTTTATTTAAATAAATGAAAAATGAAATAAAAAAAATTAAAAAAAAAAATCAGAAAACCATATAACCGTATAATCATTTCTTATTTAATTAAAAAATGATTATATGATTTTTTTTCATCCTCTCCTCTTTCACTCTCGTTCTCTTCTTCCTCCTCCACCCATAAATCCCCAAATTATTGCCAATATCTCTTCTCAACATAACAGCACAAACCCAATCATTAACAATTTCTTCCACCTCATTTTTGTTTGCTTTATCAATTTATCTTCTTGTTTTCAAAGCTTCCAAGCTAAACTATATTCATCTTTCTTCCAGAAAAGCACGACACCAGAAAAATAAAAAAAACCAAATGTTAGAAGAAAATAGTGAAAAGAGGAGAAGAGACCTGAAACATATTTGATTCGAATTTGACAGTAATGGTGGAAATCGAATCGAATTTGAAAGAAATTATCAAAAGGATTCGAATTTGACAGTAATGTTAGAATGATTTGTGTTTGTTAAGTGATTAATTCTTTGAACCAAATGACATGATTTATGATTGTATACATAAATCGGTGGAAAAAGATTAATTGGGATTTTGGGGTTTTTGATTTTATTTTTAAATTGAGAATAATTGGTTTTCTAGACATGGAGTGGTGTTGAAAATGATGATGATGATGGAGGAAGTCTTTCTTTTTCTTTCTTTTTTTCCTCTGGATTTATTTGATGAATGTTTATGAAGATGAAGAAGATGAGGGAAAAATATGAACAAGAGAGTTTTCGACCAATGCAAAAGTGACATGTGTCATTATGTTAAAGATTTTCAATTTCTTTTTTAATTATTTAATTTAGAAAAAGATTATATGAGGGATTTATTTTTAATTCTTTTTTTTCTGATTTTTTTATTTCATTTTTCATTTATTTAATTAAAAAAATGATTATATGGTTTTTTTTTTAATTTTTTAATTAAATAATTACACACGTGGCGTGCCACGTAGGCGTTGACCGGTCAAAATTGGCAAAAAGGACCAAATTTGCAATGGGGCTAAAACTTAGGGGGCCAAAATTGTAGTTTTCATACTTAGGGGGCCAAAATTGCAAGTTTTTGAAAGTTAAGGGCGGAAAAGTGCACTTTAGCCTAATAACTATGCATAAATATTGAAAACAGGAATGATAACTAAACACAAAAAAACAAACACAATACAGACACCATGGGCAAAACAATAATTTTGGTGTGAACTAGAGGGGTAGTTTGGTAACTCCATTCCCTTATTCTCATTTTCCATGCCTTTCTCTTTCTTCTCTTCCCGTTAACCTCTTCTTCTCTCCCAGCAACAACATTTCACCACCACCACAACCACCACCAACACCGTCCTTGTCAGTCACAACCACCGCCGTCCCACCGCACCCACCATCCTTCTCATCTTTTCTTCCGTCCCATCCTCCTAAACACTAGCCACCGTCAACCATCAACCATCAACCCCTTCTTTTTCACCTCTTTTCTTCCACCATCCTCTCACCACCATCCTCCTCTCCTCCGTCCAACACCAACAACCATTACTCTCTTCCCTCTCGGATCTAGAACTCACACAGCCGACGCATCCTCATCTCCCACTCGTCAACGGAGATCCGTTCACCGCCGTCTGAGACCCATCGTGGACCTCCAGCGCCGGCAACATTAACACCACCACCTCCTGCTTTCTTTCATTCATTCTAGATCTACTATTCATATGTGTTTCTTTGATTCCCTTTTTTTTAATCGGAGTTGTGTTCGATTTTGACGACGGCGAGTTTGGTGGAGACTGAGAAACGAGAGGGAGAGACTGAGTGAGAATGGGCGGCCACCGAGTTGCAGAGACGGTGATGGTGGTGCGAAAGAGATAAGCAGAGGAGTCACAGGGAAATGAAAAAGAAAACAAAAAAAAAAAATGAAGTATAAAGTAACAGTGTCAAAAAAGGAAAATACAGTATAATTATACTGTGGTGTCTGTATTGTGTCACAAAAAATGTGTCAAGTTATCATTTTTGTATTGAAAATAGTTTATTCGAAAAAATAGTATATCCTTACTGAACATGAACATGTAGAAACACATACTCCCTCTGTCTCATATATATCAACAAAAAAAAAAAAATCAATTAGAAGATTTAAAATAAATAAATAAATACAAGAAATTTTTAATAAATTTCACTTATTTAATTATATTGTGTTTGAAAAACTCTTTAGTTAATTAAAAAGTTAAATTTTATTAATCTAATTTATCTTTGTGAAACAAGTTTTGATAAATTACAATTTGGAGAATTTATTATTATTTGATATAGATAGATGAATCTCCATATTATTGTTTTTTTGACAAAGGATCTCTTTATGAATTAATCTGTGAAGCCCGGATACGAGATACGATACGGATACGATACTGCACCGATACGTCGATACGGGAAAATTTCAAAAATCAAGATACGATACGGCTGGGATACGTTAATAAAAAAATTATATAATTAAATGTACAATATAATTATAACCATTTTTTTAATATGCAAATATATTAACAAACACAAGAAACCAGGCTCGTAGCACATTAACATAAATATAAATAATATTGACGATTAAGAGAGTGGTCATTAGTCAATTACATACGCAATATATACCAAAAAGAGCACCATCAGTGTTATACATCAATGCTACACTATATCCAAAAGGAACATTGTTAGTGCTATACTATATCGATCCAAAAAAGAAGCACTATATCCAAAAAAGAACACATCAGTACTAAGAGTTAACACTAACATGTAACTAACTTGTACAATATAATGTTTTTATTCTTATTTTTTATATAAAAAAAAACATAAATCTAAATAATATAAAAAACACAAGTATCCGTGAGTATCGGGACGTATCGGAAAGTATCGGATAATTATTTTTTTAAAAAATAAAATTTAATATTTGGATACTCTTCGGATACGTATCGGGAAGTATCGGGCAGGTATCGGTGCAGGATACGCAGGGGATACGATACGTCATCCATTTTGAAGTATCGGGGCTTCACAGGAATTAATTAATGTAGATAATGACTTGTGGTAACATGATGCAATGCAGGTGGGAGAACTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATTGCTGGGTATGTTCCAACTTTCACTCCTCATTATTTTAATCACATTCGTGTTTATACAATTGATCTAATTAGTATGTATTGTGAATGTAAATATTTGTTTATCATCAATCATTACTAGACCATTAAATATATATTTTTATTATCAATCAAAATGTGTGTTTATCGTCATCGTGAACATAACTCAATTGACAGATACGTTGCAAATTCTTAAGGTATGGAGTTCGAACTTGAGATTCCTCATTTGCTTTAAGAGTTAAATTTCTAGACACTAAAATATTTAGTGGAAAAAACACATTTGTATACCCGACAAAACAAATGATATAAACTTAACTAAGAGTGAGAAAGATCCAATATTCCATTTAGGCCTTGTTTCCTAACAGGATCTTATTGTTTGCAAATTTCTTTTCTTATCTCACACTTCTCGGATATTTTGGTTTGTCTAGATTTTGAAATTCAGACATGTAAAAAAGGTGTAAACACCTGTTTTTACGTGTATGTATTTTAAAATCCGAACAAACCAGAAACCTCCGAGAAGTGTGGAGTGGAAAAGAAACAATCTTATTGTTTTGACACTAAATATACTGCAGGCCTGCAACTGGAGCTTCAATGAATCCAGTAAGAACACTAGGACCAGCAATTGCTGCAAACAACTACAAAGGCATATGGCTATATCTCATAGCCCCTATTCTTGGTGCTCTTGGTGGGGCAGGAGCTTACACTGCTGTCAAGCTTCCTGATGAAGAGTTTAACTCTGAGGTTAAAGCCTCTTCTGCCCCTGGAAGTTTCAGAAGATGA
Protein sequence

>MS.gene000607.t1

MDNEEIPSVPSTPATPGTPGAPLFGGFKSERTGNGRKNSLLKNLKCFSVEDWTLEDGALPKVTCSLPPPPVPLAKKVGAEFIGTYILMFAGIATAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIAAQVLASICASFTLKGVFHPFMSGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSEVKASSAPGSFRR