Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004291.t1 | XP_013462601.1 | 100 | 316 | 0 | 0 | 1 | 316 | 16 | 331 | 1.00E-151 | 546.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004291.t1 | Q9AYE4 | 84.5 | 316 | 49 | 0 | 1 | 316 | 1 | 316 | 1.1e-125 | 451.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004291.t1 | A0A072V4P2 | 100.0 | 316 | 0 | 0 | 1 | 316 | 16 | 331 | 7.2e-152 | 546.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004291 | MS.gene85956 | PPI |
| MS.gene004291 | MS.gene21371 | PPI |
| MS.gene004291 | MS.gene97486 | PPI |
| MS.gene053227 | MS.gene004291 | PPI |
| MS.gene004291 | MS.gene83591 | PPI |
| MS.gene004291 | MS.gene97484 | PPI |
| MS.gene004291 | MS.gene071145 | PPI |
| MS.gene005718 | MS.gene004291 | PPI |
| MS.gene004291 | MS.gene071146 | PPI |
| MS.gene004291 | MS.gene035327 | PPI |
| MS.gene21596 | MS.gene004291 | PPI |
| MS.gene004291 | MS.gene067467 | PPI |
| MS.gene004291 | MS.gene022937 | PPI |
| MS.gene004291 | MS.gene029856 | PPI |
| MS.gene004291 | MS.gene041553 | PPI |
| MS.gene86993 | MS.gene004291 | PPI |
| MS.gene004291 | MS.gene000607 | PPI |
| MS.gene004291 | MS.gene034252 | PPI |
| MS.gene004291 | MS.gene036493 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004291.t1 | MTR_2g016690 | 100.000 | 316 | 0 | 0 | 1 | 316 | 16 | 331 | 0.0 | 664 |
| MS.gene004291.t1 | MTR_4g119620 | 21.649 | 291 | 189 | 8 | 38 | 308 | 30 | 301 | 5.51e-21 | 92.0 |
| MS.gene004291.t1 | MTR_4g119620 | 24.800 | 250 | 166 | 8 | 1 | 242 | 86 | 321 | 4.16e-14 | 72.4 |
| MS.gene004291.t1 | MTR_6g004040 | 27.778 | 216 | 149 | 6 | 6 | 217 | 72 | 284 | 1.90e-20 | 92.4 |
| MS.gene004291.t1 | MTR_6g004040 | 27.668 | 253 | 164 | 9 | 26 | 273 | 5 | 243 | 8.64e-19 | 87.4 |
| MS.gene004291.t1 | MTR_5g022690 | 26.606 | 218 | 146 | 5 | 71 | 286 | 272 | 477 | 1.72e-17 | 83.2 |
| MS.gene004291.t1 | MTR_4g105700 | 23.427 | 286 | 191 | 8 | 29 | 299 | 354 | 626 | 3.25e-17 | 82.8 |
| MS.gene004291.t1 | MTR_4g105700 | 23.373 | 338 | 206 | 12 | 7 | 298 | 116 | 446 | 1.76e-11 | 65.5 |
| MS.gene004291.t1 | MTR_1g072140 | 23.396 | 265 | 183 | 6 | 7 | 267 | 41 | 289 | 3.73e-17 | 80.9 |
| MS.gene004291.t1 | MTR_1g072140 | 23.793 | 290 | 205 | 7 | 23 | 308 | 15 | 292 | 1.17e-16 | 79.3 |
| MS.gene004291.t1 | MTR_1g072140 | 24.206 | 252 | 169 | 8 | 2 | 245 | 78 | 315 | 2.39e-14 | 72.8 |
| MS.gene004291.t1 | MTR_1g054300 | 23.101 | 316 | 186 | 9 | 26 | 298 | 110 | 411 | 2.03e-16 | 80.1 |
| MS.gene004291.t1 | MTR_2g012630 | 27.333 | 300 | 196 | 11 | 22 | 316 | 2 | 284 | 3.94e-16 | 79.7 |
| MS.gene004291.t1 | MTR_2g012630 | 24.658 | 219 | 152 | 7 | 6 | 217 | 71 | 283 | 2.56e-14 | 73.9 |
| MS.gene004291.t1 | MTR_2g012630 | 27.333 | 300 | 196 | 11 | 22 | 316 | 2 | 284 | 4.91e-16 | 79.3 |
| MS.gene004291.t1 | MTR_2g012630 | 24.658 | 219 | 152 | 7 | 6 | 217 | 71 | 283 | 3.13e-14 | 73.9 |
| MS.gene004291.t1 | MTR_1g097140 | 25.000 | 300 | 180 | 8 | 1 | 284 | 131 | 401 | 8.51e-16 | 77.8 |
| MS.gene004291.t1 | MTR_4g095058 | 25.153 | 326 | 186 | 11 | 7 | 297 | 244 | 546 | 8.61e-15 | 75.1 |
| MS.gene004291.t1 | MTR_4g095058 | 25.153 | 326 | 186 | 11 | 7 | 297 | 242 | 544 | 8.84e-15 | 75.1 |
| MS.gene004291.t1 | MTR_5g016370 | 23.988 | 321 | 198 | 10 | 7 | 298 | 261 | 564 | 2.84e-14 | 73.6 |
| MS.gene004291.t1 | MTR_4g123597 | 24.335 | 263 | 178 | 7 | 55 | 307 | 381 | 632 | 3.81e-14 | 73.6 |
| MS.gene004291.t1 | MTR_4g123597 | 19.608 | 306 | 234 | 5 | 8 | 307 | 375 | 674 | 2.13e-11 | 65.1 |
| MS.gene004291.t1 | MTR_7g086360 | 24.473 | 237 | 159 | 6 | 70 | 299 | 47 | 270 | 6.90e-14 | 71.6 |
| MS.gene004291.t1 | MTR_7g086360 | 24.648 | 284 | 189 | 9 | 36 | 308 | 56 | 325 | 1.83e-13 | 70.5 |
| MS.gene004291.t1 | MTR_7g086360 | 23.891 | 293 | 188 | 10 | 7 | 283 | 69 | 342 | 7.77e-12 | 65.5 |
| MS.gene004291.t1 | MTR_3g075400 | 24.490 | 294 | 182 | 10 | 8 | 285 | 240 | 509 | 7.75e-14 | 72.4 |
| MS.gene004291.t1 | MTR_8g106790 | 24.601 | 313 | 183 | 15 | 5 | 284 | 28 | 320 | 9.59e-14 | 71.2 |
| MS.gene004291.t1 | MTR_8g106790 | 26.457 | 223 | 149 | 6 | 77 | 292 | 14 | 228 | 2.59e-11 | 63.9 |
| MS.gene004291.t1 | MTR_5g016350 | 24.891 | 229 | 155 | 6 | 77 | 298 | 270 | 488 | 2.16e-13 | 70.9 |
| MS.gene004291.t1 | MTR_5g016350 | 24.891 | 229 | 155 | 6 | 77 | 298 | 334 | 552 | 2.36e-13 | 70.9 |
| MS.gene004291.t1 | MTR_3g052220 | 24.903 | 257 | 163 | 9 | 1 | 243 | 272 | 512 | 1.01e-12 | 68.9 |
| MS.gene004291.t1 | MTR_4g104380 | 23.693 | 287 | 193 | 8 | 8 | 285 | 245 | 514 | 2.83e-12 | 67.4 |
| MS.gene004291.t1 | MTR_8g038550 | 25.773 | 194 | 122 | 7 | 117 | 305 | 181 | 357 | 4.14e-12 | 67.4 |
| MS.gene004291.t1 | MTR_4g125710 | 24.590 | 305 | 165 | 10 | 7 | 298 | 32 | 284 | 6.88e-12 | 65.5 |
| MS.gene004291.t1 | MTR_2g102267 | 24.153 | 236 | 164 | 7 | 77 | 308 | 16 | 240 | 7.94e-12 | 65.5 |
| MS.gene004291.t1 | MTR_3g106080 | 22.951 | 244 | 131 | 5 | 50 | 292 | 435 | 622 | 8.84e-12 | 66.2 |
| MS.gene004291.t1 | MTR_3g106080 | 36.634 | 101 | 61 | 2 | 8 | 107 | 518 | 616 | 8.84e-12 | 66.2 |
| MS.gene004291.t1 | MTR_6g465150 | 25.514 | 243 | 150 | 10 | 75 | 309 | 147 | 366 | 1.97e-11 | 64.7 |
| MS.gene004291.t1 | MTR_7g095190 | 24.545 | 220 | 140 | 6 | 41 | 244 | 22 | 231 | 2.57e-11 | 63.9 |
| MS.gene004291.t1 | MTR_8g104010 | 26.201 | 229 | 141 | 6 | 84 | 305 | 512 | 719 | 2.61e-11 | 64.7 |
| MS.gene004291.t1 | MTR_8g104010 | 26.316 | 228 | 140 | 6 | 84 | 304 | 875 | 1081 | 2.70e-11 | 65.1 |
| MS.gene004291.t1 | MTR_8g104010 | 26.201 | 229 | 141 | 6 | 84 | 305 | 595 | 802 | 2.91e-11 | 64.7 |
| MS.gene004291.t1 | MTR_7g095190 | 24.545 | 220 | 140 | 6 | 41 | 244 | 22 | 231 | 5.56e-11 | 63.5 |
| MS.gene004291.t1 | MTR_3g088545 | 24.242 | 297 | 191 | 8 | 8 | 296 | 100 | 370 | 6.45e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004291.t1 | AT3G18140 | 85.761 | 309 | 40 | 1 | 1 | 309 | 1 | 305 | 0.0 | 565 |
| MS.gene004291.t1 | AT2G22040 | 69.967 | 303 | 87 | 2 | 6 | 307 | 11 | 310 | 1.36e-156 | 440 |
| MS.gene004291.t1 | AT3G18140 | 90.498 | 221 | 21 | 0 | 1 | 221 | 1 | 221 | 3.04e-153 | 428 |
| MS.gene004291.t1 | AT3G49660 | 22.951 | 305 | 182 | 10 | 29 | 308 | 18 | 294 | 7.45e-25 | 102 |
| MS.gene004291.t1 | AT4G02730 | 23.973 | 292 | 203 | 8 | 23 | 308 | 31 | 309 | 3.27e-19 | 87.0 |
| MS.gene004291.t1 | AT4G02730 | 24.567 | 289 | 191 | 9 | 7 | 284 | 57 | 329 | 1.08e-17 | 82.8 |
| MS.gene004291.t1 | AT2G41500 | 25.874 | 286 | 154 | 8 | 8 | 291 | 313 | 542 | 4.02e-18 | 85.1 |
| MS.gene004291.t1 | AT2G41500 | 34.043 | 141 | 79 | 5 | 173 | 311 | 266 | 394 | 3.59e-12 | 67.4 |
| MS.gene004291.t1 | AT2G41500 | 25.874 | 286 | 154 | 8 | 8 | 291 | 313 | 542 | 4.02e-18 | 85.1 |
| MS.gene004291.t1 | AT2G41500 | 34.043 | 141 | 79 | 5 | 173 | 311 | 266 | 394 | 3.59e-12 | 67.4 |
| MS.gene004291.t1 | AT5G16750 | 25.524 | 286 | 185 | 8 | 29 | 299 | 353 | 625 | 3.12e-17 | 82.8 |
| MS.gene004291.t1 | AT1G11160 | 30.144 | 209 | 131 | 5 | 72 | 278 | 52 | 247 | 7.69e-17 | 81.6 |
| MS.gene004291.t1 | AT1G11160 | 25.134 | 187 | 134 | 5 | 6 | 189 | 71 | 254 | 1.49e-13 | 72.0 |
| MS.gene004291.t1 | AT1G11160 | 30.144 | 209 | 131 | 5 | 72 | 278 | 52 | 247 | 8.47e-17 | 81.6 |
| MS.gene004291.t1 | AT1G11160 | 25.134 | 187 | 134 | 5 | 6 | 189 | 71 | 254 | 1.41e-13 | 72.0 |
| MS.gene004291.t1 | AT1G11160 | 30.144 | 209 | 131 | 5 | 72 | 278 | 52 | 247 | 9.30e-17 | 81.6 |
| MS.gene004291.t1 | AT1G11160 | 25.134 | 187 | 134 | 5 | 6 | 189 | 71 | 254 | 1.52e-13 | 71.6 |
| MS.gene004291.t1 | AT5G25150 | 28.111 | 217 | 138 | 7 | 1 | 212 | 426 | 629 | 9.83e-17 | 81.3 |
| MS.gene004291.t1 | AT1G61210 | 28.505 | 214 | 138 | 5 | 68 | 279 | 48 | 248 | 1.02e-16 | 81.3 |
| MS.gene004291.t1 | AT1G61210 | 24.599 | 187 | 135 | 5 | 6 | 189 | 71 | 254 | 1.03e-13 | 72.4 |
| MS.gene004291.t1 | AT5G25150 | 28.111 | 217 | 138 | 7 | 1 | 212 | 426 | 629 | 1.15e-16 | 80.9 |
| MS.gene004291.t1 | AT5G52820 | 22.611 | 314 | 190 | 8 | 26 | 298 | 100 | 401 | 1.33e-16 | 80.5 |
| MS.gene004291.t1 | AT1G61210 | 28.505 | 214 | 138 | 5 | 68 | 279 | 48 | 248 | 1.62e-16 | 80.9 |
| MS.gene004291.t1 | AT1G61210 | 24.599 | 187 | 135 | 5 | 6 | 189 | 71 | 254 | 2.03e-13 | 71.6 |
| MS.gene004291.t1 | AT1G61210 | 28.505 | 214 | 138 | 5 | 68 | 279 | 48 | 248 | 1.63e-16 | 80.9 |
| MS.gene004291.t1 | AT1G61210 | 24.599 | 187 | 135 | 5 | 6 | 189 | 71 | 254 | 2.15e-13 | 71.2 |
| MS.gene004291.t1 | AT1G11160 | 29.756 | 205 | 129 | 5 | 76 | 278 | 14 | 205 | 3.50e-16 | 79.7 |
| MS.gene004291.t1 | AT1G11160 | 25.134 | 187 | 134 | 5 | 6 | 189 | 29 | 212 | 1.46e-13 | 72.0 |
| MS.gene004291.t1 | AT5G23430 | 25.463 | 216 | 154 | 6 | 6 | 217 | 72 | 284 | 4.48e-16 | 79.3 |
| MS.gene004291.t1 | AT5G23430 | 28.696 | 230 | 143 | 11 | 26 | 249 | 5 | 219 | 3.08e-14 | 73.9 |
| MS.gene004291.t1 | AT5G23430 | 25.463 | 216 | 154 | 6 | 6 | 217 | 72 | 284 | 4.48e-16 | 79.3 |
| MS.gene004291.t1 | AT5G23430 | 28.696 | 230 | 143 | 11 | 26 | 249 | 5 | 219 | 3.08e-14 | 73.9 |
| MS.gene004291.t1 | AT5G23430 | 25.463 | 216 | 154 | 6 | 6 | 217 | 72 | 284 | 4.70e-16 | 79.3 |
| MS.gene004291.t1 | AT5G23430 | 28.696 | 230 | 143 | 11 | 26 | 249 | 5 | 219 | 3.20e-14 | 73.9 |
| MS.gene004291.t1 | AT5G08390 | 25.688 | 218 | 149 | 7 | 7 | 217 | 73 | 284 | 5.81e-16 | 79.0 |
| MS.gene004291.t1 | AT5G08390 | 28.261 | 230 | 144 | 10 | 26 | 249 | 5 | 219 | 6.14e-16 | 79.0 |
| MS.gene004291.t1 | AT1G18080 | 23.226 | 310 | 189 | 12 | 7 | 284 | 30 | 322 | 3.88e-14 | 72.4 |
| MS.gene004291.t1 | AT1G18080 | 27.350 | 234 | 154 | 8 | 77 | 303 | 14 | 238 | 2.24e-12 | 67.0 |
| MS.gene004291.t1 | AT2G43770 | 25.506 | 247 | 161 | 7 | 72 | 308 | 90 | 323 | 4.06e-14 | 72.4 |
| MS.gene004291.t1 | AT2G43770 | 24.735 | 283 | 198 | 9 | 7 | 283 | 67 | 340 | 9.56e-14 | 71.2 |
| MS.gene004291.t1 | AT2G43770 | 23.109 | 238 | 161 | 8 | 70 | 299 | 45 | 268 | 6.95e-12 | 65.9 |
| MS.gene004291.t1 | AT3G18130 | 22.330 | 309 | 192 | 12 | 7 | 284 | 30 | 321 | 1.27e-13 | 70.9 |
| MS.gene004291.t1 | AT5G67320 | 22.462 | 325 | 208 | 10 | 2 | 298 | 274 | 582 | 5.88e-13 | 69.7 |
| MS.gene004291.t1 | AT4G29830 | 25.161 | 310 | 184 | 12 | 3 | 308 | 29 | 294 | 9.63e-13 | 68.2 |
| MS.gene004291.t1 | AT5G53500 | 21.795 | 234 | 175 | 6 | 69 | 300 | 319 | 546 | 2.68e-12 | 67.8 |
| MS.gene004291.t1 | AT5G53500 | 21.795 | 234 | 175 | 6 | 69 | 300 | 319 | 546 | 2.68e-12 | 67.8 |
| MS.gene004291.t1 | AT1G48630 | 22.436 | 312 | 188 | 13 | 7 | 284 | 30 | 321 | 4.32e-12 | 66.2 |
| MS.gene004291.t1 | AT1G49040 | 28.986 | 207 | 131 | 5 | 84 | 289 | 861 | 1052 | 6.03e-12 | 67.0 |
| MS.gene004291.t1 | AT1G49040 | 21.577 | 241 | 173 | 4 | 49 | 289 | 870 | 1094 | 2.84e-11 | 65.1 |
| MS.gene004291.t1 | AT5G64730 | 23.322 | 283 | 189 | 10 | 10 | 284 | 35 | 297 | 6.75e-12 | 65.5 |
| MS.gene004291.t1 | AT5G51980 | 25.000 | 248 | 154 | 10 | 75 | 313 | 148 | 372 | 1.29e-11 | 65.5 |
| MS.gene004291.t1 | AT5G51980 | 25.000 | 248 | 154 | 10 | 75 | 313 | 148 | 372 | 1.29e-11 | 65.5 |
| MS.gene004291.t1 | AT4G25440 | 25.000 | 248 | 154 | 11 | 75 | 313 | 141 | 365 | 2.98e-11 | 64.3 |
| MS.gene004291.t1 | AT4G25440 | 25.000 | 248 | 154 | 11 | 75 | 313 | 141 | 365 | 2.98e-11 | 64.3 |
| MS.gene004291.t1 | AT4G25440 | 25.000 | 248 | 154 | 11 | 75 | 313 | 141 | 365 | 2.98e-11 | 64.3 |
| MS.gene004291.t1 | AT3G15980 | 23.830 | 235 | 164 | 6 | 78 | 308 | 15 | 238 | 8.29e-11 | 63.5 |
| MS.gene004291.t1 | AT3G15980 | 23.830 | 235 | 164 | 6 | 78 | 308 | 15 | 238 | 8.79e-11 | 63.5 |
| MS.gene004291.t1 | AT3G15980 | 23.830 | 235 | 164 | 6 | 78 | 308 | 15 | 238 | 8.90e-11 | 63.2 |
Find 95 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATCACACCATTCGATTT+TGG | 0.123001 | 2.4:+68340932 | MS.gene004291:CDS |
| TAGTGAAACTTAACCTGATT+TGG | 0.233887 | 2.4:-68342381 | None:intergenic |
| GACAACTGGTGAAGATATTA+AGG | 0.291016 | 2.4:+68346032 | MS.gene004291:CDS |
| CCCAACTGCCATTACATTAC+TGG | 0.320304 | 2.4:-68342130 | None:intergenic |
| CTAATATCTGGTGATCAAAA+TGG | 0.327450 | 2.4:+68342740 | MS.gene004291:CDS |
| ATTATCTAGTACCTGTAATA+AGG | 0.327568 | 2.4:-68345054 | None:intergenic |
| CTAAGAGTGGTCGCTGTTAC+CGG | 0.330181 | 2.4:+68340959 | MS.gene004291:CDS |
| ACACTAGAGAAGACTTTGAT+AGG | 0.342874 | 2.4:+68344884 | MS.gene004291:CDS |
| GTAGTAGCAGCAAATAATAA+TGG | 0.372307 | 2.4:+68343308 | MS.gene004291:CDS |
| AAAGGGAATCAAACCGAATC+AGG | 0.378982 | 2.4:-68340994 | None:intergenic |
| CTGATCATACTGTTAAGATA+TGG | 0.381071 | 2.4:+68344846 | MS.gene004291:CDS |
| AGTGAAACTTAACCTGATTT+GGG | 0.381247 | 2.4:-68342380 | None:intergenic |
| GCAGCTAGGTAGCGTTTATC+CGG | 0.392338 | 2.4:-68341945 | None:intergenic |
| AGGACGGCACGGTTAAAATC+TGG | 0.393095 | 2.4:+68342190 | MS.gene004291:CDS |
| GATGGGAACTGGATGTATTC+TGG | 0.398060 | 2.4:+68342162 | MS.gene004291:CDS |
| CTGATTCAACTGCTAGGCTT+TGG | 0.398439 | 2.4:+68346004 | MS.gene004291:CDS |
| TGTTGTGTTGCACCCAAATC+AGG | 0.399358 | 2.4:+68342368 | MS.gene004291:CDS |
| CCACTATGTCAAGAGCTTCC+AGG | 0.401429 | 2.4:-68346111 | None:intergenic |
| CAACAGACTGAGCTAATATC+TGG | 0.403914 | 2.4:+68342728 | MS.gene004291:intron |
| TGATGTTATTTCTAGGTACT+TGG | 0.405905 | 2.4:+68344811 | MS.gene004291:intron |
| GGTTCCAGTGTGATGGGAAC+TGG | 0.407444 | 2.4:+68342151 | MS.gene004291:CDS |
| GACTATTCAATATCCTGATT+CGG | 0.411230 | 2.4:+68340981 | MS.gene004291:CDS |
| CAACCTGAGTCCCTCGCAAC+AGG | 0.414556 | 2.4:-68343349 | None:intergenic |
| GATGGTGCCTACCTTATTAC+AGG | 0.417629 | 2.4:+68345043 | MS.gene004291:CDS |
| TTGAAAAGGCATACCGGTTG+AGG | 0.444590 | 2.4:-68342014 | None:intergenic |
| CTACATGATGGGGCTGAACC+TGG | 0.444723 | 2.4:+68346093 | MS.gene004291:CDS |
| GTTAAGATATGGAATGTTGA+TGG | 0.452389 | 2.4:+68344857 | MS.gene004291:CDS |
| AGGCTTTGGTCTACGACAAC+TGG | 0.457644 | 2.4:+68346018 | MS.gene004291:CDS |
| CAGGTCATCAACGTTGGGTG+TGG | 0.469687 | 2.4:+68345002 | MS.gene004291:intron |
| GACTGTGTCTTCTCAGTGGA+TGG | 0.470196 | 2.4:+68345025 | MS.gene004291:CDS |
| ACCAGTAATGTAATGGCAGT+TGG | 0.470299 | 2.4:+68342129 | MS.gene004291:CDS |
| TAGTAGCAGCAAATAATAAT+GGG | 0.471047 | 2.4:+68343309 | MS.gene004291:CDS |
| TCATATTCCCTCTGACAACC+TGG | 0.475114 | 2.4:-68342324 | None:intergenic |
| AGTGATGTGGGATGGCAGTT+TGG | 0.478829 | 2.4:+68343286 | MS.gene004291:CDS |
| CAGCTAGGTAGCGTTTATCC+GGG | 0.479038 | 2.4:-68341944 | None:intergenic |
| GCGCCTGTTGCGAGGGACTC+AGG | 0.489088 | 2.4:+68343346 | MS.gene004291:CDS |
| CGGTTAAAATCTGGGATTTG+AGG | 0.491874 | 2.4:+68342199 | MS.gene004291:CDS |
| CCAGTAATGTAATGGCAGTT+GGG | 0.496871 | 2.4:+68342130 | MS.gene004291:CDS |
| TAACTCAAATAGCCCTCAAC+CGG | 0.501574 | 2.4:+68342001 | MS.gene004291:CDS |
| TTTGTTGTGCCCTACATGAT+GGG | 0.521009 | 2.4:+68346082 | MS.gene004291:CDS |
| ACTTTGTGTAGCAAGTGAAT+CGG | 0.521623 | 2.4:+68341910 | MS.gene004291:intron |
| AAACGCTACCTAGCTGCAGC+TGG | 0.523547 | 2.4:+68341951 | MS.gene004291:CDS |
| CTTCCTCTGATTCAACTGCT+AGG | 0.524672 | 2.4:+68345998 | MS.gene004291:CDS |
| TTGTAGATTTATGATGCCCT+TGG | 0.525184 | 2.4:-68346059 | None:intergenic |
| AATCAGGATATTGAATAGTC+CGG | 0.528032 | 2.4:-68340978 | None:intergenic |
| CATCCCAGGTCATCAACGTT+GGG | 0.531195 | 2.4:+68344997 | MS.gene004291:intron |
| TGAAAAGGCATACCGGTTGA+GGG | 0.534461 | 2.4:-68342013 | None:intergenic |
| ATTTGTTGTGCCCTACATGA+TGG | 0.534836 | 2.4:+68346081 | MS.gene004291:CDS |
| GGACGGCACGGTTAAAATCT+GGG | 0.540623 | 2.4:+68342191 | MS.gene004291:CDS |
| AGGTTCAGCCCCATCATGTA+GGG | 0.542947 | 2.4:-68346091 | None:intergenic |
| CAGGTTCAGCCCCATCATGT+AGG | 0.547738 | 2.4:-68346092 | None:intergenic |
| AAATTCATGTAGTTGTGAGT+TGG | 0.548386 | 2.4:+68342790 | MS.gene004291:CDS |
| GCAGTTGGGTTCCAGTGTGA+TGG | 0.556448 | 2.4:+68342144 | MS.gene004291:CDS |
| CGTACAGCTGTATCAACCTC+TGG | 0.556960 | 2.4:-68343254 | None:intergenic |
| CGGACATACCAGTAATGTAA+TGG | 0.558118 | 2.4:+68342122 | MS.gene004291:CDS |
| AAGCCTAGCAGTTGAATCAG+AGG | 0.558720 | 2.4:-68346001 | None:intergenic |
| ATGTGTGGCGCCTGTTGCGA+GGG | 0.559794 | 2.4:+68343339 | MS.gene004291:CDS |
| TATGTGTGGCGCCTGTTGCG+AGG | 0.561962 | 2.4:+68343338 | MS.gene004291:CDS |
| TACGCTCTCTAACAGTGATG+TGG | 0.563946 | 2.4:+68343273 | MS.gene004291:CDS |
| CAGTTGGGTTCCAGTGTGAT+GGG | 0.576975 | 2.4:+68342145 | MS.gene004291:CDS |
| AGGTCATCAACGTTGGGTGT+GGG | 0.582358 | 2.4:+68345003 | MS.gene004291:intron |
| TTCTGGTTCAGAGGACGGCA+CGG | 0.583119 | 2.4:+68342179 | MS.gene004291:CDS |
| ATGTATTCTGGTTCAGAGGA+CGG | 0.585814 | 2.4:+68342174 | MS.gene004291:CDS |
| TGTGTAGCAAGTGAATCGGC+TGG | 0.591353 | 2.4:+68341914 | MS.gene004291:intron |
| CAGCTGGCAATCCTCACATA+CGG | 0.592560 | 2.4:+68341967 | MS.gene004291:CDS |
| GAAGATATTAAGGTTTACCA+AGG | 0.596926 | 2.4:+68346042 | MS.gene004291:CDS |
| ACATTCTTTCTGACCTGTGG+GGG | 0.598210 | 2.4:-68343547 | None:intergenic |
| GAGGATTGCCAGCTGCAGCT+AGG | 0.598510 | 2.4:-68341959 | None:intergenic |
| TGTGCTTGCAGCTTATGAAG+TGG | 0.600333 | 2.4:-68343479 | None:intergenic |
| CACATTCTTTCTGACCTGTG+GGG | 0.602282 | 2.4:-68343548 | None:intergenic |
| CTGGATGTATTCTGGTTCAG+AGG | 0.602526 | 2.4:+68342170 | MS.gene004291:CDS |
| GCAGGGCACCAGGTTGTCAG+AGG | 0.605488 | 2.4:+68342316 | MS.gene004291:intron |
| GTGGGACTGTGTCTTCTCAG+TGG | 0.613297 | 2.4:+68345021 | MS.gene004291:CDS |
| CTTAGCTTCCCAAAATCGAA+TGG | 0.615720 | 2.4:-68340941 | None:intergenic |
| TGGCAGGTAATGAGCTATGA+CGG | 0.616839 | 2.4:+68342102 | MS.gene004291:intron |
| AAAATGGCAATATCCGAGTG+TGG | 0.617600 | 2.4:+68342756 | MS.gene004291:CDS |
| AAATGGCAATATCCGAGTGT+GGG | 0.619634 | 2.4:+68342757 | MS.gene004291:CDS |
| TCTAGTACCTGTAATAAGGT+AGG | 0.620505 | 2.4:-68345050 | None:intergenic |
| ACATCCCAGGTCATCAACGT+TGG | 0.627714 | 2.4:+68344996 | MS.gene004291:intron |
| ACATCAAACAACCGTATGTG+AGG | 0.631473 | 2.4:-68341978 | None:intergenic |
| GGTTCTAATGTAGGTGCCAG+AGG | 0.632397 | 2.4:+68343238 | MS.gene004291:intron |
| TTGTTGTGCCCTACATGATG+GGG | 0.633853 | 2.4:+68346083 | MS.gene004291:CDS |
| CAGGGCACCAGGTTGTCAGA+GGG | 0.634834 | 2.4:+68342317 | MS.gene004291:intron |
| TCTCTAACAGTGATGTGGGA+TGG | 0.636735 | 2.4:+68343278 | MS.gene004291:CDS |
| CATAAGCTGCAAGCACACAA+TGG | 0.645127 | 2.4:+68343485 | MS.gene004291:CDS |
| CAACAGTGTTAACTGCTGCA+CGG | 0.650309 | 2.4:-68342350 | None:intergenic |
| ACATCCAGTTCCCATCACAC+TGG | 0.650873 | 2.4:-68342155 | None:intergenic |
| AGCTAGGTAGCGTTTATCCG+GGG | 0.651380 | 2.4:-68341943 | None:intergenic |
| TTGCTGTCAAATCCCACACT+CGG | 0.654067 | 2.4:-68342769 | None:intergenic |
| ACGCTCTCTAACAGTGATGT+GGG | 0.663603 | 2.4:+68343274 | MS.gene004291:CDS |
| AAGATATTAAGGTTTACCAA+GGG | 0.663851 | 2.4:+68346043 | MS.gene004291:CDS |
| GAATCGGCTGGAGATAACCC+CGG | 0.691008 | 2.4:+68341926 | MS.gene004291:CDS |
| GGTGTGATCATAGCTAGCAG+TGG | 0.691765 | 2.4:-68340920 | None:intergenic |
| GCAGTGGCGAGTAACACTGA+TGG | 0.700399 | 2.4:-68340904 | None:intergenic |
| ATAATGGGACTTGTTATGTG+TGG | 0.719713 | 2.4:+68343324 | MS.gene004291:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTGAAACTTAAAAAAT+AGG | - | chr2.4:68341705-68341724 | None:intergenic | 10.0% |
| !! | TATGAGATTTATTTAATTAT+TGG | + | chr2.4:68342587-68342606 | MS.gene004291:intron | 10.0% |
| !!! | AAACATTTTAATTTTTTCTT+AGG | + | chr2.4:68344084-68344103 | MS.gene004291:intron | 10.0% |
| !!! | ATTATTGTGATATTTTAATA+AGG | - | chr2.4:68343377-68343396 | None:intergenic | 10.0% |
| !!! | TGTAAATTTTTTACAAATAA+TGG | + | chr2.4:68343701-68343720 | MS.gene004291:intron | 10.0% |
| !!! | TTTTTACTTATTTTTACAAA+TGG | + | chr2.4:68343421-68343440 | MS.gene004291:intron | 10.0% |
| !! | ATAAAAAAAGAATGAGAAAA+AGG | - | chr2.4:68341015-68341034 | None:intergenic | 15.0% |
| !! | ATGCTTTCTAAATATTATTT+CGG | - | chr2.4:68342928-68342947 | None:intergenic | 15.0% |
| !! | ATTTCTATTTATATAAAAGG+CGG | - | chr2.4:68344436-68344455 | None:intergenic | 15.0% |
| !! | TAAAAAAAGAATGAGAAAAA+GGG | - | chr2.4:68341014-68341033 | None:intergenic | 15.0% |
| !! | TAAATAAATGAATCCAAATA+TGG | + | chr2.4:68342886-68342905 | MS.gene004291:intron | 15.0% |
| !! | TAATTGAAAAAAATTGTTCT+AGG | + | chr2.4:68341053-68341072 | MS.gene004291:intron | 15.0% |
| !! | TTGATTATAGTAAATAACAA+TGG | + | chr2.4:68344228-68344247 | MS.gene004291:intron | 15.0% |
| !!! | AAAAAATGAACAATATTTTG+AGG | - | chr2.4:68342052-68342071 | None:intergenic | 15.0% |
| !!! | ATTCCTTTTTTAATTAAGTT+CGG | + | chr2.4:68343592-68343611 | MS.gene004291:intron | 15.0% |
| !!! | ATTGTTTTTATTCGAAAATT+TGG | + | chr2.4:68344308-68344327 | MS.gene004291:intron | 15.0% |
| !!! | ATTTTTGTACTTTTTAACAA+AGG | - | chr2.4:68344174-68344193 | None:intergenic | 15.0% |
| !!! | TCAAAATATTGTTCATTTTT+TGG | + | chr2.4:68342051-68342070 | MS.gene004291:intron | 15.0% |
| !!! | TTCTCTTTTAACTAAAAATT+TGG | - | chr2.4:68345671-68345690 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATTCGAAAATTT+GGG | + | chr2.4:68344309-68344328 | MS.gene004291:intron | 15.0% |
| !!! | TTTTTTATAAGAACCATATT+TGG | - | chr2.4:68342902-68342921 | None:intergenic | 15.0% |
| !! | AATCAGGAACATAAATTATT+TGG | - | chr2.4:68342079-68342098 | None:intergenic | 20.0% |
| !! | AGTTATGGTATAAAATGTTT+AGG | - | chr2.4:68342244-68342263 | None:intergenic | 20.0% |
| !! | AGTTGACAAAAAATTATAGA+TGG | + | chr2.4:68343196-68343215 | MS.gene004291:intron | 20.0% |
| !! | ATACCATCATTAATAACAAT+AGG | - | chr2.4:68344686-68344705 | None:intergenic | 20.0% |
| !! | CCAGAAAAAAAATTCAAAAA+AGG | + | chr2.4:68341342-68341361 | MS.gene004291:intron | 20.0% |
| !! | TAACTTCAAAACAAACATAT+AGG | - | chr2.4:68341769-68341788 | None:intergenic | 20.0% |
| !! | TGCTTTCTAAATATTATTTC+GGG | - | chr2.4:68342927-68342946 | None:intergenic | 20.0% |
| !! | TTTAACTAAATTTAAAGACC+AGG | - | chr2.4:68344625-68344644 | None:intergenic | 20.0% |
| !! | TTTCCGAACTTAATTAAAAA+AGG | - | chr2.4:68343598-68343617 | None:intergenic | 20.0% |
| !!! | ACTATAATCAAAACATGTTT+TGG | - | chr2.4:68344219-68344238 | None:intergenic | 20.0% |
| !!! | AGAATGAATTAGCTTTTATA+AGG | + | chr2.4:68341450-68341469 | MS.gene004291:intron | 20.0% |
| !!! | AGGTACTAGATAATTTTTTT+GGG | + | chr2.4:68345063-68345082 | MS.gene004291:intron | 20.0% |
| !!! | ATCTATAATTTTTTGTCAAC+TGG | - | chr2.4:68343197-68343216 | None:intergenic | 20.0% |
| !!! | CCTTTTTTGAATTTTTTTTC+TGG | - | chr2.4:68341345-68341364 | None:intergenic | 20.0% |
| !!! | TAGAAAAAGAATCTACATTT+TGG | - | chr2.4:68342466-68342485 | None:intergenic | 20.0% |
| !!! | TATTTCTTGATGTTATTTCT+AGG | + | chr2.4:68344804-68344823 | MS.gene004291:intron | 20.0% |
| !!! | TTAATTATTGGTTGATTGTT+TGG | + | chr2.4:68342599-68342618 | MS.gene004291:intron | 20.0% |
| !!! | TTTCCTATTGTTATTAATGA+TGG | + | chr2.4:68344680-68344699 | MS.gene004291:intron | 20.0% |
| !!! | TTTTAACAAAGGAATCATTA+TGG | - | chr2.4:68344163-68344182 | None:intergenic | 20.0% |
| !!! | TTTTTAATTAAGTTCGGAAA+TGG | + | chr2.4:68343598-68343617 | MS.gene004291:intron | 20.0% |
| ! | AAAATTGACAATTTGACATG+AGG | - | chr2.4:68343405-68343424 | None:intergenic | 25.0% |
| ! | AAAGAAAATTAAGTGTCTCA+TGG | + | chr2.4:68345460-68345479 | MS.gene004291:intron | 25.0% |
| ! | AAGAAAATTAAGTGTCTCAT+GGG | + | chr2.4:68345461-68345480 | MS.gene004291:intron | 25.0% |
| ! | AAGATATTAAGGTTTACCAA+GGG | + | chr2.4:68346043-68346062 | MS.gene004291:CDS | 25.0% |
| ! | AAGGAGGAAAATGATAAAAT+TGG | - | chr2.4:68345850-68345869 | None:intergenic | 25.0% |
| ! | AATTAATGTAACCATAAGTC+AGG | - | chr2.4:68342432-68342451 | None:intergenic | 25.0% |
| ! | AATTTATGTTCCTGATTATG+TGG | + | chr2.4:68342082-68342101 | MS.gene004291:intron | 25.0% |
| ! | ACTGTTATGAATATAATCTG+TGG | + | chr2.4:68344401-68344420 | MS.gene004291:intron | 25.0% |
| ! | ATGTAACTTTACTAGTGTAT+GGG | + | chr2.4:68344028-68344047 | MS.gene004291:intron | 25.0% |
| ! | ATTAATGTAACCATAAGTCA+GGG | - | chr2.4:68342431-68342450 | None:intergenic | 25.0% |
| ! | ATTATACAACAGTGTTCAAA+AGG | - | chr2.4:68345133-68345152 | None:intergenic | 25.0% |
| ! | ATTATCTAGTACCTGTAATA+AGG | - | chr2.4:68345057-68345076 | None:intergenic | 25.0% |
| ! | CAGTGTAAAAAAGTTTCAAA+AGG | + | chr2.4:68345246-68345265 | MS.gene004291:intron | 25.0% |
| ! | CTGTTATGAATATAATCTGT+GGG | + | chr2.4:68344402-68344421 | MS.gene004291:intron | 25.0% |
| ! | GCATTATCAATTGTGAATTT+CGG | + | chr2.4:68345899-68345918 | MS.gene004291:intron | 25.0% |
| ! | GGAAATATGAAGTATAGATA+AGG | + | chr2.4:68345345-68345364 | MS.gene004291:intron | 25.0% |
| ! | TAAAGTTACATAACTTACTG+CGG | - | chr2.4:68344019-68344038 | None:intergenic | 25.0% |
| ! | TACTAATTTATCATGGAGAA+TGG | + | chr2.4:68341838-68341857 | MS.gene004291:intron | 25.0% |
| ! | TAGTAGCAGCAAATAATAAT+GGG | + | chr2.4:68343309-68343328 | MS.gene004291:CDS | 25.0% |
| ! | TATGTAACTTTACTAGTGTA+TGG | + | chr2.4:68344027-68344046 | MS.gene004291:intron | 25.0% |
| ! | TGATTGCTACTAATTTATCA+TGG | + | chr2.4:68341831-68341850 | MS.gene004291:intron | 25.0% |
| ! | TGGAGTACAATTATTGTTAT+TGG | + | chr2.4:68345922-68345941 | MS.gene004291:intron | 25.0% |
| ! | TGTTATTAATGATGGTATAC+TGG | + | chr2.4:68344688-68344707 | MS.gene004291:intron | 25.0% |
| ! | TTTAGTTAAAACTGTTTGAC+TGG | + | chr2.4:68344635-68344654 | MS.gene004291:intron | 25.0% |
| !! | AAAATTCTGAAGAGATAACT+AGG | + | chr2.4:68342490-68342509 | MS.gene004291:intron | 25.0% |
| !! | AAATTTGAGGTCTAAAGTTA+TGG | - | chr2.4:68342259-68342278 | None:intergenic | 25.0% |
| !! | AACTTTAGACCTCAAATTTT+TGG | + | chr2.4:68342260-68342279 | MS.gene004291:intron | 25.0% |
| !! | ACTTTAGACCTCAAATTTTT+GGG | + | chr2.4:68342261-68342280 | MS.gene004291:intron | 25.0% |
| !! | CATTTTCTAAATCTGGATTA+TGG | - | chr2.4:68345521-68345540 | None:intergenic | 25.0% |
| !! | CTTTTTCTTTCTATATCGTT+TGG | + | chr2.4:68343099-68343118 | MS.gene004291:intron | 25.0% |
| !! | GATTTTATAGTTGCATAATG+AGG | + | chr2.4:68345798-68345817 | MS.gene004291:intron | 25.0% |
| !! | TATTTGATGACAAAAATGCA+GGG | + | chr2.4:68342299-68342318 | MS.gene004291:intron | 25.0% |
| !! | TGTACCTTATGTGAAATTTT+AGG | + | chr2.4:68341115-68341134 | MS.gene004291:intron | 25.0% |
| !! | TTATTTGATGACAAAAATGC+AGG | + | chr2.4:68342298-68342317 | MS.gene004291:intron | 25.0% |
| !! | TTTAAGGAGAACGAAATTTT+GGG | - | chr2.4:68344963-68344982 | None:intergenic | 25.0% |
| !!! | AATGAACAATATTTTGAGGT+AGG | - | chr2.4:68342048-68342067 | None:intergenic | 25.0% |
| !!! | CAAATTTGTGTAGTTTTAGA+TGG | + | chr2.4:68345384-68345403 | MS.gene004291:intron | 25.0% |
| !!! | CAGGTACTAGATAATTTTTT+TGG | + | chr2.4:68345062-68345081 | MS.gene004291:intron | 25.0% |
| !!! | CTTTTGAAACTTTTTTACAC+TGG | - | chr2.4:68345248-68345267 | None:intergenic | 25.0% |
| !!! | GGAACGTTATTTTAAATTTG+TGG | + | chr2.4:68343217-68343236 | MS.gene004291:intron | 25.0% |
| !!! | GGTACTAGATAATTTTTTTG+GGG | + | chr2.4:68345064-68345083 | MS.gene004291:intron | 25.0% |
| !!! | GTAAAATGTTTTGGAAACAT+TGG | - | chr2.4:68343905-68343924 | None:intergenic | 25.0% |
| !!! | TAAATTTGTGGTTCTAATGT+AGG | + | chr2.4:68343229-68343248 | MS.gene004291:intron | 25.0% |
| !!! | TGATTTTAAGTTCCATATAG+TGG | + | chr2.4:68341868-68341887 | MS.gene004291:intron | 25.0% |
| AAAGTTACATAACTTACTGC+GGG | - | chr2.4:68344018-68344037 | None:intergenic | 30.0% | |
| AAATTCATGTAGTTGTGAGT+TGG | + | chr2.4:68342790-68342809 | MS.gene004291:CDS | 30.0% | |
| AACTAAGCATTTAGGTAATC+CGG | + | chr2.4:68343655-68343674 | MS.gene004291:intron | 30.0% | |
| AATCAGGATATTGAATAGTC+CGG | - | chr2.4:68340981-68341000 | None:intergenic | 30.0% | |
| AGTGAAACTTAACCTGATTT+GGG | - | chr2.4:68342383-68342402 | None:intergenic | 30.0% | |
| AGTGGTTAAACTAAGCATTT+AGG | + | chr2.4:68343647-68343666 | MS.gene004291:intron | 30.0% | |
| AGTTGAAACAAACACTGATA+CGG | + | chr2.4:68341316-68341335 | MS.gene004291:intron | 30.0% | |
| AGTTGTAAAAGAGTTTGAAC+TGG | + | chr2.4:68344570-68344589 | MS.gene004291:intron | 30.0% | |
| ATAACAATGGCCTAGATATA+TGG | + | chr2.4:68344241-68344260 | MS.gene004291:intron | 30.0% | |
| ATCAATCACCATCTAACAAA+AGG | - | chr2.4:68341815-68341834 | None:intergenic | 30.0% | |
| ATGGCTCAATATTGAGTAAT+GGG | + | chr2.4:68342643-68342662 | MS.gene004291:intron | 30.0% | |
| ATTAAGTTCGGAAATGGAAA+AGG | + | chr2.4:68343604-68343623 | MS.gene004291:intron | 30.0% | |
| ATTCCTCATATGTTGCAAAA+TGG | + | chr2.4:68345871-68345890 | MS.gene004291:intron | 30.0% | |
| CAACACAAAAACTTCAGATA+CGG | + | chr2.4:68344275-68344294 | MS.gene004291:intron | 30.0% | |
| CGATCCTAAAATTTCACATA+AGG | - | chr2.4:68341122-68341141 | None:intergenic | 30.0% | |
| CTAATATCTGGTGATCAAAA+TGG | + | chr2.4:68342740-68342759 | MS.gene004291:CDS | 30.0% | |
| CTGATCATACTGTTAAGATA+TGG | + | chr2.4:68344846-68344865 | MS.gene004291:CDS | 30.0% | |
| GAAATAGATAGAGTACATGT+AGG | - | chr2.4:68343038-68343057 | None:intergenic | 30.0% | |
| GAAGATATTAAGGTTTACCA+AGG | + | chr2.4:68346042-68346061 | MS.gene004291:CDS | 30.0% | |
| GACTATTCAATATCCTGATT+CGG | + | chr2.4:68340981-68341000 | MS.gene004291:CDS | 30.0% | |
| GATGAAGAAAAAACGTTTAG+CGG | + | chr2.4:68345696-68345715 | MS.gene004291:intron | 30.0% | |
| GATTGTTTGGTACTTAAATC+TGG | + | chr2.4:68342612-68342631 | MS.gene004291:intron | 30.0% | |
| GGTTAAGTTTCACTATTTGT+TGG | + | chr2.4:68342389-68342408 | MS.gene004291:intron | 30.0% | |
| GTAGCTATTTACATTGGATT+TGG | + | chr2.4:68343848-68343867 | MS.gene004291:intron | 30.0% | |
| GTAGTAGCAGCAAATAATAA+TGG | + | chr2.4:68343308-68343327 | MS.gene004291:CDS | 30.0% | |
| GTTAAGATATGGAATGTTGA+TGG | + | chr2.4:68344857-68344876 | MS.gene004291:CDS | 30.0% | |
| TAACAATGGCCTAGATATAT+GGG | + | chr2.4:68344242-68344261 | MS.gene004291:intron | 30.0% | |
| TAACATCTTAAATGAGCTAG+AGG | - | chr2.4:68344783-68344802 | None:intergenic | 30.0% | |
| TAGTGAAACTTAACCTGATT+TGG | - | chr2.4:68342384-68342403 | None:intergenic | 30.0% | |
| TATTTACCAATTGCTAACCT+TGG | + | chr2.4:68345425-68345444 | MS.gene004291:intron | 30.0% | |
| TCATATTTCCTTTGAACTGA+AGG | - | chr2.4:68345335-68345354 | None:intergenic | 30.0% | |
| TCTATTTGCCCAAAAATTTG+AGG | - | chr2.4:68342272-68342291 | None:intergenic | 30.0% | |
| TGTAACTTTACTAGTGTATG+GGG | + | chr2.4:68344029-68344048 | MS.gene004291:intron | 30.0% | |
| TTACTGTACACAATTTCCTT+TGG | + | chr2.4:68343123-68343142 | MS.gene004291:intron | 30.0% | |
| TTATCAATTGTGAATTTCGG+TGG | + | chr2.4:68345902-68345921 | MS.gene004291:intron | 30.0% | |
| TTCAATGTAATCACACATGT+CGG | + | chr2.4:68341371-68341390 | MS.gene004291:intron | 30.0% | |
| TTCATTTAAGTAAAAGCGAG+CGG | + | chr2.4:68343826-68343845 | MS.gene004291:intron | 30.0% | |
| TTGCAACATATGAGGAATAA+AGG | - | chr2.4:68345869-68345888 | None:intergenic | 30.0% | |
| TTGCTAACTCATACAAGAAT+AGG | - | chr2.4:68344544-68344563 | None:intergenic | 30.0% | |
| TTTGTTTAGTGCTTAATGCA+TGG | - | chr2.4:68343943-68343962 | None:intergenic | 30.0% | |
| ! | AAGTGTATTGGTGTGAATAT+TGG | - | chr2.4:68345967-68345986 | None:intergenic | 30.0% |
| ! | AATATTGAGTAATGGGATTG+CGG | + | chr2.4:68342650-68342669 | MS.gene004291:intron | 30.0% |
| ! | CTTTTATAAGGTGAACTCTA+GGG | + | chr2.4:68341462-68341481 | MS.gene004291:intron | 30.0% |
| ! | GTTTAAGGAGAACGAAATTT+TGG | - | chr2.4:68344964-68344983 | None:intergenic | 30.0% |
| ! | TCTTTAAAGACAAACAACCA+AGG | - | chr2.4:68345445-68345464 | None:intergenic | 30.0% |
| ! | TGTAGTTGTTACTTAGAAAC+AGG | + | chr2.4:68345278-68345297 | MS.gene004291:intron | 30.0% |
| ! | TGTTTCCAAAACATTTTACC+TGG | + | chr2.4:68343906-68343925 | MS.gene004291:intron | 30.0% |
| ! | TTAAGGAGAACGAAATTTTG+GGG | - | chr2.4:68344962-68344981 | None:intergenic | 30.0% |
| ! | TTATCATGGAGAATGGTTTT+TGG | + | chr2.4:68341845-68341864 | MS.gene004291:intron | 30.0% |
| ! | TTGAACCAGGTAAAATGTTT+TGG | - | chr2.4:68343914-68343933 | None:intergenic | 30.0% |
| !! | AAATTTTGGGGAAAGTTGTA+TGG | - | chr2.4:68344950-68344969 | None:intergenic | 30.0% |
| !! | AATCTAGAATGTGAGGTTTT+AGG | + | chr2.4:68341230-68341249 | MS.gene004291:intron | 30.0% |
| !! | ATCTAGAATGTGAGGTTTTA+GGG | + | chr2.4:68341231-68341250 | MS.gene004291:intron | 30.0% |
| !! | ATTTGGTTTGAATACATGCA+AGG | + | chr2.4:68343865-68343884 | MS.gene004291:intron | 30.0% |
| !! | TGATGTTATTTCTAGGTACT+TGG | + | chr2.4:68344811-68344830 | MS.gene004291:intron | 30.0% |
| !! | TTTGGTTTGAATACATGCAA+GGG | + | chr2.4:68343866-68343885 | MS.gene004291:intron | 30.0% |
| !!! | AAGAAAAAGCATCTACGTTT+TGG | - | chr2.4:68343088-68343107 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTAATCAACACAC+CGG | - | chr2.4:68343677-68343696 | None:intergenic | 30.0% |
| AAACAACCAAGGTTAGCAAT+TGG | - | chr2.4:68345434-68345453 | None:intergenic | 35.0% | |
| AATTGGATCCTTCAGTTCAA+AGG | + | chr2.4:68345324-68345343 | MS.gene004291:intron | 35.0% | |
| AATTGTGAAAGCTGAAACAC+TGG | + | chr2.4:68345720-68345739 | MS.gene004291:intron | 35.0% | |
| AATTTCGTTCTCCTTAAACG+AGG | + | chr2.4:68344965-68344984 | MS.gene004291:intron | 35.0% | |
| ACACTAGAGAAGACTTTGAT+AGG | + | chr2.4:68344884-68344903 | MS.gene004291:CDS | 35.0% | |
| ACTTTGTGTAGCAAGTGAAT+CGG | + | chr2.4:68341910-68341929 | MS.gene004291:intron | 35.0% | |
| AGAGATAACTAGGACTGAAT+TGG | + | chr2.4:68342500-68342519 | MS.gene004291:intron | 35.0% | |
| ATACTGATGTGACTACGAAA+GGG | - | chr2.4:68345164-68345183 | None:intergenic | 35.0% | |
| ATAGATAGAGTACATGTAGG+AGG | - | chr2.4:68343035-68343054 | None:intergenic | 35.0% | |
| ATATTTCCTGTGTGCTTCTA+TGG | + | chr2.4:68344454-68344473 | MS.gene004291:intron | 35.0% | |
| ATTAATGATGGTATACTGGC+TGG | + | chr2.4:68344692-68344711 | MS.gene004291:intron | 35.0% | |
| CAACATATGAGGAATAAAGG+AGG | - | chr2.4:68345866-68345885 | None:intergenic | 35.0% | |
| CATGGCTCAATATTGAGTAA+TGG | + | chr2.4:68342642-68342661 | MS.gene004291:intron | 35.0% | |
| CTAAATTTAAAGACCAGGAC+AGG | - | chr2.4:68344620-68344639 | None:intergenic | 35.0% | |
| CTTAAATCTGGATTCTGACA+TGG | + | chr2.4:68342624-68342643 | MS.gene004291:intron | 35.0% | |
| GAAGTGATAAAGGCTAATCA+CGG | - | chr2.4:68343969-68343988 | None:intergenic | 35.0% | |
| GACAACTGGTGAAGATATTA+AGG | + | chr2.4:68346032-68346051 | MS.gene004291:CDS | 35.0% | |
| GGTATTTGTTCTTATAGTCC+AGG | + | chr2.4:68345085-68345104 | MS.gene004291:intron | 35.0% | |
| GTTATGTGCTGAAGTGATAA+AGG | - | chr2.4:68343979-68343998 | None:intergenic | 35.0% | |
| TACACAATTTCCTTTGGCTA+AGG | + | chr2.4:68343129-68343148 | MS.gene004291:intron | 35.0% | |
| TAGGATCGAAGTTTGTGATT+TGG | + | chr2.4:68341134-68341153 | MS.gene004291:intron | 35.0% | |
| TATACTGATGTGACTACGAA+AGG | - | chr2.4:68345165-68345184 | None:intergenic | 35.0% | |
| TCTAGTACCTGTAATAAGGT+AGG | - | chr2.4:68345053-68345072 | None:intergenic | 35.0% | |
| TCTTATGCATTGTCCAGAAT+TGG | + | chr2.4:68345307-68345326 | MS.gene004291:intron | 35.0% | |
| TGCACATGTATGTTGAAAGT+TGG | - | chr2.4:68344346-68344365 | None:intergenic | 35.0% | |
| TGTAGCATCAAAACTTCTGA+TGG | - | chr2.4:68341429-68341448 | None:intergenic | 35.0% | |
| TTGCATGAACCCATATATCT+AGG | - | chr2.4:68344254-68344273 | None:intergenic | 35.0% | |
| TTGTAGATTTATGATGCCCT+TGG | - | chr2.4:68346062-68346081 | None:intergenic | 35.0% | |
| TTTATGCAAGCAAACTGTTC+TGG | - | chr2.4:68341671-68341690 | None:intergenic | 35.0% | |
| ! | AGACCATTTTGCAACATATG+AGG | - | chr2.4:68345877-68345896 | None:intergenic | 35.0% |
| ! | ATGATCACACCATTCGATTT+TGG | + | chr2.4:68340932-68340951 | MS.gene004291:CDS | 35.0% |
| ! | GCAAAATTAGTGCCACTATA+TGG | - | chr2.4:68341883-68341902 | None:intergenic | 35.0% |
| ! | GCTTTTATAAGGTGAACTCT+AGG | + | chr2.4:68341461-68341480 | MS.gene004291:intron | 35.0% |
| ! | TATCAGTTGAAAAGGCATAC+CGG | - | chr2.4:68342023-68342042 | None:intergenic | 35.0% |
| ! | TGATCACACCATTCGATTTT+GGG | + | chr2.4:68340933-68340952 | MS.gene004291:CDS | 35.0% |
| ! | TGTCGAGCATTTTCTAAATC+TGG | - | chr2.4:68345528-68345547 | None:intergenic | 35.0% |
| !! | ATAATGGGACTTGTTATGTG+TGG | + | chr2.4:68343324-68343343 | MS.gene004291:CDS | 35.0% |
| !! | CGGTGTGTTGATTAAAACAA+AGG | + | chr2.4:68343675-68343694 | MS.gene004291:intron | 35.0% |
| !! | CTAAGAGTGTTGTCGAATTA+GGG | - | chr2.4:68341503-68341522 | None:intergenic | 35.0% |
| !! | GACTTCTGAGATTTCAATTG+TGG | - | chr2.4:68343727-68343746 | None:intergenic | 35.0% |
| AAAATGCTCGACAGAGTGTA+GGG | + | chr2.4:68345535-68345554 | MS.gene004291:intron | 40.0% | |
| AAAATGGCAATATCCGAGTG+TGG | + | chr2.4:68342756-68342775 | MS.gene004291:CDS | 40.0% | |
| AAAGGGAATCAAACCGAATC+AGG | - | chr2.4:68340997-68341016 | None:intergenic | 40.0% | |
| AAAGTGCAACTCCATCTTCA+TGG | - | chr2.4:68344496-68344515 | None:intergenic | 40.0% | |
| AAATGGCAATATCCGAGTGT+GGG | + | chr2.4:68342757-68342776 | MS.gene004291:CDS | 40.0% | |
| AACACATTCTTTCTGACCTG+TGG | - | chr2.4:68343553-68343572 | None:intergenic | 40.0% | |
| ACACATTCTTTCTGACCTGT+GGG | - | chr2.4:68343552-68343571 | None:intergenic | 40.0% | |
| ACATCAAACAACCGTATGTG+AGG | - | chr2.4:68341981-68342000 | None:intergenic | 40.0% | |
| ACCAGTAATGTAATGGCAGT+TGG | + | chr2.4:68342129-68342148 | MS.gene004291:CDS | 40.0% | |
| ACTAGTGAAACGGAACACTA+CGG | - | chr2.4:68341629-68341648 | None:intergenic | 40.0% | |
| CAACAGACTGAGCTAATATC+TGG | + | chr2.4:68342728-68342747 | MS.gene004291:intron | 40.0% | |
| CAAGTCGAGAGATGTAATCA+CGG | - | chr2.4:68341569-68341588 | None:intergenic | 40.0% | |
| CAGGAACTGGACATATAAGT+GGG | + | chr2.4:68345104-68345123 | MS.gene004291:intron | 40.0% | |
| CAGTCCTGGAATGATAAAAG+TGG | - | chr2.4:68344725-68344744 | None:intergenic | 40.0% | |
| CCAGTAATGTAATGGCAGTT+GGG | + | chr2.4:68342130-68342149 | MS.gene004291:CDS | 40.0% | |
| CCTAATTCGACAACACTCTT+AGG | + | chr2.4:68341501-68341520 | MS.gene004291:intron | 40.0% | |
| CGGACATACCAGTAATGTAA+TGG | + | chr2.4:68342122-68342141 | MS.gene004291:CDS | 40.0% | |
| CTGACGATCAAGTCAGTAAT+TGG | + | chr2.4:68341202-68341221 | MS.gene004291:intron | 40.0% | |
| CTTAGCTTCCCAAAATCGAA+TGG | - | chr2.4:68340944-68340963 | None:intergenic | 40.0% | |
| GCATCAAAACTTCTGATGGA+AGG | - | chr2.4:68341425-68341444 | None:intergenic | 40.0% | |
| GCTGCAATGACAAAGTGTAT+TGG | - | chr2.4:68345979-68345998 | None:intergenic | 40.0% | |
| GGTAGGTGTATCAGTTGAAA+AGG | - | chr2.4:68342031-68342050 | None:intergenic | 40.0% | |
| GTGTAGGGACAAACTTGAAT+TGG | + | chr2.4:68345550-68345569 | MS.gene004291:intron | 40.0% | |
| TAACTCAAATAGCCCTCAAC+CGG | + | chr2.4:68342001-68342020 | MS.gene004291:CDS | 40.0% | |
| TACTGTCTATCCCTGACTTA+TGG | + | chr2.4:68342418-68342437 | MS.gene004291:intron | 40.0% | |
| TATGTTCCTGATTATGTGGC+AGG | + | chr2.4:68342086-68342105 | MS.gene004291:intron | 40.0% | |
| TCAACTCGTGACTAAGGTTA+AGG | - | chr2.4:68341272-68341291 | None:intergenic | 40.0% | |
| TCATTACCTGCCACATAATC+AGG | - | chr2.4:68342095-68342114 | None:intergenic | 40.0% | |
| TGAACTGAAGGATCCAATTC+TGG | - | chr2.4:68345323-68345342 | None:intergenic | 40.0% | |
| TGCATGGTGAAAATTGAACC+AGG | - | chr2.4:68343927-68343946 | None:intergenic | 40.0% | |
| TGTTCTTATAGTCCAGGAAC+TGG | + | chr2.4:68345091-68345110 | MS.gene004291:intron | 40.0% | |
| TTCGGAAATGGAAAAGGTTG+TGG | + | chr2.4:68343610-68343629 | MS.gene004291:intron | 40.0% | |
| TTGTAAGCTCTTGTTGCTCA+TGG | + | chr2.4:68342982-68343001 | MS.gene004291:intron | 40.0% | |
| ! | ATATGACCATAGAAGCACAC+AGG | - | chr2.4:68344463-68344482 | None:intergenic | 40.0% |
| ! | ATTACATCTCTCGACTTGCT+TGG | + | chr2.4:68341571-68341590 | MS.gene004291:intron | 40.0% |
| ! | CACACATGCCTTTTGTTAGA+TGG | + | chr2.4:68341804-68341823 | MS.gene004291:intron | 40.0% |
| ! | CATCTAACAAAAGGCATGTG+TGG | - | chr2.4:68341806-68341825 | None:intergenic | 40.0% |
| ! | CGGTTAAAATCTGGGATTTG+AGG | + | chr2.4:68342199-68342218 | MS.gene004291:CDS | 40.0% |
| ! | GATTCACTTGCTACACAAAG+TGG | - | chr2.4:68341911-68341930 | None:intergenic | 40.0% |
| ! | GGTCTAGAATCTAGAATGTG+AGG | + | chr2.4:68341223-68341242 | MS.gene004291:intron | 40.0% |
| ! | TAACTTACTGCGGGTTTGTT+TGG | - | chr2.4:68344009-68344028 | None:intergenic | 40.0% |
| ! | TCGAAGTTTGTGATTTGGAG+TGG | + | chr2.4:68341139-68341158 | MS.gene004291:intron | 40.0% |
| ! | TTACATCTCTCGACTTGCTT+GGG | + | chr2.4:68341572-68341591 | MS.gene004291:intron | 40.0% |
| ! | TTTGTTGTGCCCTACATGAT+GGG | + | chr2.4:68346082-68346101 | MS.gene004291:CDS | 40.0% |
| !! | ATGTATTCTGGTTCAGAGGA+CGG | + | chr2.4:68342174-68342193 | MS.gene004291:CDS | 40.0% |
| !! | ATTTGTTGTGCCCTACATGA+TGG | + | chr2.4:68346081-68346100 | MS.gene004291:CDS | 40.0% |
| !! | CCTAAGAGTGTTGTCGAATT+AGG | - | chr2.4:68341504-68341523 | None:intergenic | 40.0% |
| !! | GAGACCACTTTTATCATTCC+AGG | + | chr2.4:68344718-68344737 | MS.gene004291:intron | 40.0% |
| !! | TTCCGTTTCACTAGTGGATT+GGG | + | chr2.4:68341634-68341653 | MS.gene004291:intron | 40.0% |
| !! | TTGATCGTCAGAGTGTTTTC+AGG | - | chr2.4:68341193-68341212 | None:intergenic | 40.0% |
| !!! | ATCTACGTTTTGGAGAAGCA+TGG | - | chr2.4:68343078-68343097 | None:intergenic | 40.0% |
| !!! | TGTAGTTTTAGATGGCTGTC+TGG | + | chr2.4:68345392-68345411 | MS.gene004291:intron | 40.0% |
| AACTCCATCTTCATGGCAAG+AGG | - | chr2.4:68344489-68344508 | None:intergenic | 45.0% | |
| AAGCCTAGCAGTTGAATCAG+AGG | - | chr2.4:68346004-68346023 | None:intergenic | 45.0% | |
| ACATTCTTTCTGACCTGTGG+GGG | - | chr2.4:68343550-68343569 | None:intergenic | 45.0% | |
| ACGCTCTCTAACAGTGATGT+GGG | + | chr2.4:68343274-68343293 | MS.gene004291:CDS | 45.0% | |
| ACTTGCTTGGGTAGATCTCT+AGG | + | chr2.4:68341584-68341603 | MS.gene004291:intron | 45.0% | |
| AGCCCAATCCACTAGTGAAA+CGG | - | chr2.4:68341639-68341658 | None:intergenic | 45.0% | |
| CAACAGTGTTAACTGCTGCA+CGG | - | chr2.4:68342353-68342372 | None:intergenic | 45.0% | |
| CAACTGGTGAGAGAGAAACA+GGG | - | chr2.4:68343181-68343200 | None:intergenic | 45.0% | |
| CACATTCTTTCTGACCTGTG+GGG | - | chr2.4:68343551-68343570 | None:intergenic | 45.0% | |
| CATAAGCTGCAAGCACACAA+TGG | + | chr2.4:68343485-68343504 | MS.gene004291:CDS | 45.0% | |
| CCACTTATATGTCCAGTTCC+TGG | - | chr2.4:68345106-68345125 | None:intergenic | 45.0% | |
| CCAGGAACTGGACATATAAG+TGG | + | chr2.4:68345103-68345122 | MS.gene004291:intron | 45.0% | |
| CCCAACTGCCATTACATTAC+TGG | - | chr2.4:68342133-68342152 | None:intergenic | 45.0% | |
| CGAGCGGTAGCTATTTACAT+TGG | + | chr2.4:68343842-68343861 | MS.gene004291:intron | 45.0% | |
| CTAGTGAAACGGAACACTAC+GGG | - | chr2.4:68341628-68341647 | None:intergenic | 45.0% | |
| CTGATTCAACTGCTAGGCTT+TGG | + | chr2.4:68346004-68346023 | MS.gene004291:CDS | 45.0% | |
| CTTCCTCTGATTCAACTGCT+AGG | + | chr2.4:68345998-68346017 | MS.gene004291:CDS | 45.0% | |
| CTTGCTTGGGTAGATCTCTA+GGG | + | chr2.4:68341585-68341604 | MS.gene004291:intron | 45.0% | |
| GAAAATGCTCGACAGAGTGT+AGG | + | chr2.4:68345534-68345553 | MS.gene004291:intron | 45.0% | |
| GAACTCTCAACTCGTGACTA+AGG | - | chr2.4:68341278-68341297 | None:intergenic | 45.0% | |
| GATGGGAACTGGATGTATTC+TGG | + | chr2.4:68342162-68342181 | MS.gene004291:CDS | 45.0% | |
| GATGGTGCCTACCTTATTAC+AGG | + | chr2.4:68345043-68345062 | MS.gene004291:CDS | 45.0% | |
| GTAGTGTTCCGTTTCACTAG+TGG | + | chr2.4:68341628-68341647 | MS.gene004291:intron | 45.0% | |
| TACGCTCTCTAACAGTGATG+TGG | + | chr2.4:68343273-68343292 | MS.gene004291:CDS | 45.0% | |
| TCAACTGGTGAGAGAGAAAC+AGG | - | chr2.4:68343182-68343201 | None:intergenic | 45.0% | |
| TCATATTCCCTCTGACAACC+TGG | - | chr2.4:68342327-68342346 | None:intergenic | 45.0% | |
| TCGACAACACTCTTAGGAGA+TGG | + | chr2.4:68341507-68341526 | MS.gene004291:intron | 45.0% | |
| TCGTTCTCCTTAAACGAGGT+TGG | + | chr2.4:68344969-68344988 | MS.gene004291:intron | 45.0% | |
| TCTCTAACAGTGATGTGGGA+TGG | + | chr2.4:68343278-68343297 | MS.gene004291:CDS | 45.0% | |
| TGGCAGGTAATGAGCTATGA+CGG | + | chr2.4:68342102-68342121 | MS.gene004291:intron | 45.0% | |
| TGTACAGCCAACCTCGTTTA+AGG | - | chr2.4:68344979-68344998 | None:intergenic | 45.0% | |
| TGTGAAAGCTGAAACACTGG+TGG | + | chr2.4:68345723-68345742 | MS.gene004291:intron | 45.0% | |
| TGTGCTTGCAGCTTATGAAG+TGG | - | chr2.4:68343482-68343501 | None:intergenic | 45.0% | |
| TGTTGTGTTGCACCCAAATC+AGG | + | chr2.4:68342368-68342387 | MS.gene004291:CDS | 45.0% | |
| TTCACCTCTTGCCATGAAGA+TGG | + | chr2.4:68344482-68344501 | MS.gene004291:intron | 45.0% | |
| TTGCTGTCAAATCCCACACT+CGG | - | chr2.4:68342772-68342791 | None:intergenic | 45.0% | |
| TTGTTGTGCCCTACATGATG+GGG | + | chr2.4:68346083-68346102 | MS.gene004291:CDS | 45.0% | |
| ! | ATCTAATAGAGCACCTGTCC+TGG | + | chr2.4:68344604-68344623 | MS.gene004291:intron | 45.0% |
| ! | GAGGATATAGTGAGAAGCAC+TGG | - | chr2.4:68343159-68343178 | None:intergenic | 45.0% |
| ! | GTTCCGTTTCACTAGTGGAT+TGG | + | chr2.4:68341633-68341652 | MS.gene004291:intron | 45.0% |
| ! | TGAAAAGGCATACCGGTTGA+GGG | - | chr2.4:68342016-68342035 | None:intergenic | 45.0% |
| ! | TTGAAAAGGCATACCGGTTG+AGG | - | chr2.4:68342017-68342036 | None:intergenic | 45.0% |
| !! | CGATTTTGGGAAGCTAAGAG+TGG | + | chr2.4:68340946-68340965 | MS.gene004291:CDS | 45.0% |
| !! | CTGGATGTATTCTGGTTCAG+AGG | + | chr2.4:68342170-68342189 | MS.gene004291:CDS | 45.0% |
| !! | GAACTCTAGGGTTTCTAAGG+TGG | + | chr2.4:68341474-68341493 | MS.gene004291:intron | 45.0% |
| !! | GGTGAACTCTAGGGTTTCTA+AGG | + | chr2.4:68341471-68341490 | MS.gene004291:intron | 45.0% |
| !! | TTTCACTAGTGGATTGGGCT+TGG | + | chr2.4:68341639-68341658 | MS.gene004291:intron | 45.0% |
| !!! | GTTTTCAGGTACATCACCTC+AGG | - | chr2.4:68341179-68341198 | None:intergenic | 45.0% |
| !!! | AATATTTCTATTTATATAAA+AGG | - | chr2.4:68344439-68344458 | None:intergenic | 5.0% |
| ACATCCAGTTCCCATCACAC+TGG | - | chr2.4:68342158-68342177 | None:intergenic | 50.0% | |
| ACATCCCAGGTCATCAACGT+TGG | + | chr2.4:68344996-68345015 | MS.gene004291:intron | 50.0% | |
| AGCTAGGTAGCGTTTATCCG+GGG | - | chr2.4:68341946-68341965 | None:intergenic | 50.0% | |
| AGGACGGCACGGTTAAAATC+TGG | + | chr2.4:68342190-68342209 | MS.gene004291:CDS | 50.0% | |
| AGGTCATCAACGTTGGGTGT+GGG | + | chr2.4:68345003-68345022 | MS.gene004291:intron | 50.0% | |
| AGGTTCAGCCCCATCATGTA+GGG | - | chr2.4:68346094-68346113 | None:intergenic | 50.0% | |
| AGTGATGTGGGATGGCAGTT+TGG | + | chr2.4:68343286-68343305 | MS.gene004291:CDS | 50.0% | |
| CACTGGTCAACCTTAGCCAA+AGG | - | chr2.4:68343142-68343161 | None:intergenic | 50.0% | |
| CAGCTAGGTAGCGTTTATCC+GGG | - | chr2.4:68341947-68341966 | None:intergenic | 50.0% | |
| CAGCTGGCAATCCTCACATA+CGG | + | chr2.4:68341967-68341986 | MS.gene004291:CDS | 50.0% | |
| CAGTTGGGTTCCAGTGTGAT+GGG | + | chr2.4:68342145-68342164 | MS.gene004291:CDS | 50.0% | |
| CATCCCAGGTCATCAACGTT+GGG | + | chr2.4:68344997-68345016 | MS.gene004291:intron | 50.0% | |
| CGAACAGTCATCGTGCTGTA+AGG | - | chr2.4:68342526-68342545 | None:intergenic | 50.0% | |
| CGTACAGCTGTATCAACCTC+TGG | - | chr2.4:68343257-68343276 | None:intergenic | 50.0% | |
| CTAAGAGTGGTCGCTGTTAC+CGG | + | chr2.4:68340959-68340978 | MS.gene004291:CDS | 50.0% | |
| GACTGTGTCTTCTCAGTGGA+TGG | + | chr2.4:68345025-68345044 | MS.gene004291:CDS | 50.0% | |
| GCAGCTAGGTAGCGTTTATC+CGG | - | chr2.4:68341948-68341967 | None:intergenic | 50.0% | |
| GGAACTAGATTGTCTGCCTG+AGG | + | chr2.4:68341160-68341179 | MS.gene004291:intron | 50.0% | |
| GGACGGCACGGTTAAAATCT+GGG | + | chr2.4:68342191-68342210 | MS.gene004291:CDS | 50.0% | |
| GGTGTGATCATAGCTAGCAG+TGG | - | chr2.4:68340923-68340942 | None:intergenic | 50.0% | |
| GTGGTCAAGTGAACAGCTAG+TGG | + | chr2.4:68343629-68343648 | MS.gene004291:intron | 50.0% | |
| TGTGGGGGTCACAAAACTCA+GGG | - | chr2.4:68343535-68343554 | None:intergenic | 50.0% | |
| TGTGTAGCAAGTGAATCGGC+TGG | + | chr2.4:68341914-68341933 | MS.gene004291:intron | 50.0% | |
| TTGACTGGACTGCGTCTCTA+GGG | + | chr2.4:68344650-68344669 | MS.gene004291:intron | 50.0% | |
| TTTGACTGGACTGCGTCTCT+AGG | + | chr2.4:68344649-68344668 | MS.gene004291:intron | 50.0% | |
| ! | AGGCTTTGGTCTACGACAAC+TGG | + | chr2.4:68346018-68346037 | MS.gene004291:CDS | 50.0% |
| ! | CTGAAACACTGGTGGTGAGT+GGG | + | chr2.4:68345731-68345750 | MS.gene004291:intron | 50.0% |
| ! | CTTCTGATGGAAGGTGTGTC+TGG | - | chr2.4:68341416-68341435 | None:intergenic | 50.0% |
| ! | GGTTCTAATGTAGGTGCCAG+AGG | + | chr2.4:68343238-68343257 | MS.gene004291:intron | 50.0% |
| ! | TGAAACACTGGTGGTGAGTG+GGG | + | chr2.4:68345732-68345751 | MS.gene004291:intron | 50.0% |
| ! | TGACAAAAATGCAGGGCACC+AGG | + | chr2.4:68342306-68342325 | MS.gene004291:intron | 50.0% |
| !! | ACACCCAACGTTGATGACCT+GGG | - | chr2.4:68345003-68345022 | None:intergenic | 50.0% |
| AAACGCTACCTAGCTGCAGC+TGG | + | chr2.4:68341951-68341970 | MS.gene004291:CDS | 55.0% | |
| CAGGTCATCAACGTTGGGTG+TGG | + | chr2.4:68345002-68345021 | MS.gene004291:intron | 55.0% | |
| CAGGTTCAGCCCCATCATGT+AGG | - | chr2.4:68346095-68346114 | None:intergenic | 55.0% | |
| CTGGTGAGAGAGAAACAGGG+AGG | - | chr2.4:68343178-68343197 | None:intergenic | 55.0% | |
| CTGTGGGGGTCACAAAACTC+AGG | - | chr2.4:68343536-68343555 | None:intergenic | 55.0% | |
| GAATCGGCTGGAGATAACCC+CGG | + | chr2.4:68341926-68341945 | MS.gene004291:CDS | 55.0% | |
| GCAGTGGCGAGTAACACTGA+TGG | - | chr2.4:68340907-68340926 | None:intergenic | 55.0% | |
| GCAGTTGGGTTCCAGTGTGA+TGG | + | chr2.4:68342144-68342163 | MS.gene004291:CDS | 55.0% | |
| GCGACAGTGAGATTCAGTCC+TGG | - | chr2.4:68344739-68344758 | None:intergenic | 55.0% | |
| GTGGGACTGTGTCTTCTCAG+TGG | + | chr2.4:68345021-68345040 | MS.gene004291:CDS | 55.0% | |
| GTGGGGGTCACAAAACTCAG+GGG | - | chr2.4:68343534-68343553 | None:intergenic | 55.0% | |
| ! | CTACATGATGGGGCTGAACC+TGG | + | chr2.4:68346093-68346112 | MS.gene004291:CDS | 55.0% |
| ! | GCTGAAACACTGGTGGTGAG+TGG | + | chr2.4:68345730-68345749 | MS.gene004291:intron | 55.0% |
| ! | GGTTCCAGTGTGATGGGAAC+TGG | + | chr2.4:68342151-68342170 | MS.gene004291:CDS | 55.0% |
| ! | TCTAGGGCATCCTCACAGCA+TGG | + | chr2.4:68341601-68341620 | MS.gene004291:intron | 55.0% |
| !! | CACACCCAACGTTGATGACC+TGG | - | chr2.4:68345004-68345023 | None:intergenic | 55.0% |
| !! | CTAGTGGATTGGGCTTGGCT+TGG | + | chr2.4:68341644-68341663 | MS.gene004291:intron | 55.0% |
| !! | CTGAGTTTTGTGACCCCCAC+AGG | + | chr2.4:68343534-68343553 | MS.gene004291:CDS | 55.0% |
| !! | TTCTGGTTCAGAGGACGGCA+CGG | + | chr2.4:68342179-68342198 | MS.gene004291:CDS | 55.0% |
| ATGTGTGGCGCCTGTTGCGA+GGG | + | chr2.4:68343339-68343358 | MS.gene004291:CDS | 60.0% | |
| CAACCTGAGTCCCTCGCAAC+AGG | - | chr2.4:68343352-68343371 | None:intergenic | 60.0% | |
| CACTACGGGACCATGCTGTG+AGG | - | chr2.4:68341614-68341633 | None:intergenic | 60.0% | |
| GAGGATTGCCAGCTGCAGCT+AGG | - | chr2.4:68341962-68341981 | None:intergenic | 60.0% | |
| TATGTGTGGCGCCTGTTGCG+AGG | + | chr2.4:68343338-68343357 | MS.gene004291:CDS | 60.0% | |
| ! | CAGGGCACCAGGTTGTCAGA+GGG | + | chr2.4:68342317-68342336 | MS.gene004291:intron | 60.0% |
| ! | CGAGGTTGGCTGTACATCCC+AGG | + | chr2.4:68344983-68345002 | MS.gene004291:intron | 60.0% |
| ! | GCAGGGCACCAGGTTGTCAG+AGG | + | chr2.4:68342316-68342335 | MS.gene004291:intron | 65.0% |
| GCGCCTGTTGCGAGGGACTC+AGG | + | chr2.4:68343346-68343365 | MS.gene004291:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 68340895 | 68346125 | 68340895 | ID=MS.gene004291 |
| chr2.4 | mRNA | 68340895 | 68346125 | 68340895 | ID=MS.gene004291.t1;Parent=MS.gene004291 |
| chr2.4 | exon | 68340895 | 68341002 | 68340895 | ID=MS.gene004291.t1.exon1;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68340895 | 68341002 | 68340895 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68341921 | 68342022 | 68341921 | ID=MS.gene004291.t1.exon2;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68341921 | 68342022 | 68341921 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68342108 | 68342220 | 68342108 | ID=MS.gene004291.t1.exon3;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68342108 | 68342220 | 68342108 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68342320 | 68342389 | 68342320 | ID=MS.gene004291.t1.exon4;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68342320 | 68342389 | 68342320 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68342734 | 68342811 | 68342734 | ID=MS.gene004291.t1.exon5;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68342734 | 68342811 | 68342734 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68343251 | 68343367 | 68343251 | ID=MS.gene004291.t1.exon6;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68343251 | 68343367 | 68343251 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68343461 | 68343555 | 68343461 | ID=MS.gene004291.t1.exon7;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68343461 | 68343555 | 68343461 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68344826 | 68344905 | 68344826 | ID=MS.gene004291.t1.exon8;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68344826 | 68344905 | 68344826 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68345005 | 68345064 | 68345005 | ID=MS.gene004291.t1.exon9;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68345005 | 68345064 | 68345005 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| chr2.4 | exon | 68345998 | 68346125 | 68345998 | ID=MS.gene004291.t1.exon10;Parent=MS.gene004291.t1 |
| chr2.4 | CDS | 68345998 | 68346125 | 68345998 | ID=cds.MS.gene004291.t1;Parent=MS.gene004291.t1 |
| Gene Sequence |
| Protein sequence |
