AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001345

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001345.t1 MTR_2g102570 96.034 353 8 1 1 353 1 347 0.0 701
MS.gene001345.t1 MTR_1g011580 48.870 354 169 5 3 352 4 349 1.43e-116 342
MS.gene001345.t1 MTR_0009s0050 33.645 321 190 8 27 339 23 328 1.87e-55 185
MS.gene001345.t1 MTR_0009s0050 33.645 321 190 8 27 339 23 328 2.08e-55 185
MS.gene001345.t1 MTR_5g048550 31.845 336 205 7 24 352 20 338 8.18e-55 183
MS.gene001345.t1 MTR_5g048470 30.769 325 202 7 25 340 26 336 2.64e-54 182
MS.gene001345.t1 MTR_7g068650 35.093 322 181 8 29 339 38 342 6.19e-54 181
MS.gene001345.t1 MTR_5g059130 35.714 294 176 6 57 343 43 330 3.28e-53 179
MS.gene001345.t1 MTR_5g048570 32.500 320 193 7 27 339 23 326 1.39e-52 177
MS.gene001345.t1 MTR_7g062580 32.313 294 183 7 55 340 52 337 2.43e-52 177
MS.gene001345.t1 MTR_5g055820 32.012 328 195 8 25 341 21 331 2.29e-51 174
MS.gene001345.t1 MTR_0328s0030 33.106 293 176 6 58 340 45 327 2.77e-51 174
MS.gene001345.t1 MTR_5g055680 33.125 320 193 8 27 339 23 328 2.85e-51 174
MS.gene001345.t1 MTR_2g070870 32.997 297 187 6 47 339 17 305 5.69e-51 172
MS.gene001345.t1 MTR_8g064200 32.192 292 181 6 58 340 52 335 1.27e-50 172
MS.gene001345.t1 MTR_8g064200 32.192 292 181 6 58 340 57 340 1.51e-50 172
MS.gene001345.t1 MTR_2g019370 33.550 307 185 6 56 352 26 323 1.55e-50 172
MS.gene001345.t1 MTR_5g048740 31.595 326 197 8 25 340 19 328 1.55e-50 172
MS.gene001345.t1 MTR_8g074070 34.932 292 175 5 52 334 46 331 3.30e-50 171
MS.gene001345.t1 MTR_3g026150 29.942 344 205 9 22 351 29 350 5.95e-50 171
MS.gene001345.t1 MTR_8g074050 36.364 286 167 6 58 334 52 331 6.22e-50 171
MS.gene001345.t1 MTR_7g063730 30.460 348 207 10 1 340 26 346 1.11e-49 171
MS.gene001345.t1 MTR_3g096500 32.203 354 202 8 21 353 35 371 1.24e-49 171
MS.gene001345.t1 MTR_1g034120 32.812 320 178 7 55 345 23 334 2.56e-49 169
MS.gene001345.t1 MTR_4g087090 31.210 314 186 6 55 346 27 332 2.71e-49 169
MS.gene001345.t1 MTR_4g015790 33.223 301 186 6 50 339 54 350 4.21e-49 169
MS.gene001345.t1 MTR_5g048850 32.558 301 180 7 53 340 39 329 5.23e-49 168
MS.gene001345.t1 MTR_2g437380 32.903 310 181 9 52 347 44 340 6.15e-49 168
MS.gene001345.t1 MTR_3g070860 33.445 299 183 5 52 339 44 337 7.44e-49 168
MS.gene001345.t1 MTR_1g034060 32.500 320 179 7 55 345 23 334 7.44e-49 168
MS.gene001345.t1 MTR_3g117420 34.146 287 172 7 58 334 52 331 1.23e-48 167
MS.gene001345.t1 MTR_1g081840 33.038 339 193 8 26 347 31 352 1.38e-48 168
MS.gene001345.t1 MTR_5g055900 32.188 320 196 8 27 339 23 328 2.64e-48 166
MS.gene001345.t1 MTR_5g055800 31.498 327 194 9 25 340 21 328 2.81e-48 166
MS.gene001345.t1 MTR_0009s0480 32.827 329 198 8 24 340 11 328 3.57e-48 166
MS.gene001345.t1 MTR_3g063180 35.197 304 174 8 55 342 39 335 4.81e-48 166
MS.gene001345.t1 MTR_1g033810 31.193 327 197 9 20 334 15 325 5.58e-48 166
MS.gene001345.t1 MTR_5g055690 31.790 324 199 8 25 340 21 330 6.35e-48 166
MS.gene001345.t1 MTR_5g082750 33.654 312 177 8 45 339 38 336 1.43e-47 164
MS.gene001345.t1 MTR_2g072890 32.119 302 187 6 49 340 43 336 2.56e-47 164
MS.gene001345.t1 MTR_7g062570 33.444 302 181 9 55 346 52 343 2.93e-47 164
MS.gene001345.t1 MTR_1g034140 32.903 310 185 5 57 349 26 329 3.38e-47 163
MS.gene001345.t1 MTR_1g062110 32.673 303 190 4 58 347 66 367 8.21e-47 163
MS.gene001345.t1 MTR_4g087120 33.121 314 173 9 55 340 23 327 1.25e-46 162
MS.gene001345.t1 MTR_3g072810 30.838 334 207 8 23 349 12 328 1.47e-46 161
MS.gene001345.t1 MTR_7g062550 33.110 299 186 7 55 346 57 348 4.77e-46 161
MS.gene001345.t1 MTR_3g092890 32.500 320 193 8 27 339 14 317 7.40e-46 159
MS.gene001345.t1 MTR_8g033380 34.641 306 177 5 58 347 54 352 8.48e-46 160
MS.gene001345.t1 MTR_8g093930 33.618 351 186 12 21 346 16 344 1.21e-45 160
MS.gene001345.t1 MTR_3g072820 31.186 295 188 7 57 343 41 328 1.32e-45 159
MS.gene001345.t1 MTR_2g072910 33.227 313 183 9 39 340 38 335 1.42e-45 159
MS.gene001345.t1 MTR_1g102070 33.227 313 185 5 58 353 59 364 1.47e-45 160
MS.gene001345.t1 MTR_7g102820 30.233 344 215 8 25 347 35 374 1.48e-45 160
MS.gene001345.t1 MTR_3g088745 32.143 308 187 6 49 340 27 328 1.55e-45 159
MS.gene001345.t1 MTR_1g093140 33.230 322 174 11 51 351 66 367 2.74e-45 159
MS.gene001345.t1 MTR_8g074070 34.247 292 158 6 52 334 46 312 2.77e-45 158
MS.gene001345.t1 MTR_6g464620 33.546 313 184 5 58 353 64 369 3.15e-45 159
MS.gene001345.t1 MTR_2g083000 33.893 298 158 9 57 339 32 305 5.61e-45 157
MS.gene001345.t1 MTR_8g024120 32.686 309 183 8 55 352 39 333 5.99e-45 157
MS.gene001345.t1 MTR_5g059140 32.143 280 177 5 58 329 42 316 7.34e-45 157
MS.gene001345.t1 MTR_4g087110 31.098 328 182 8 54 349 22 337 1.39e-44 157
MS.gene001345.t1 MTR_4g116010 31.034 319 202 7 28 334 13 325 2.89e-44 155
MS.gene001345.t1 MTR_8g461330 30.263 304 193 6 48 339 17 313 3.54e-44 155
MS.gene001345.t1 MTR_4g087100 32.414 290 171 7 70 343 50 330 4.50e-44 155
MS.gene001345.t1 MTR_5g032870 31.667 300 179 9 57 340 37 326 6.95e-44 154
MS.gene001345.t1 MTR_1g093120 33.648 318 176 11 51 351 60 359 3.15e-43 154
MS.gene001345.t1 MTR_5g032880 31.313 297 192 6 49 340 29 318 3.44e-43 159
MS.gene001345.t1 MTR_5g032880 32.026 306 182 9 57 346 375 670 7.67e-43 157
MS.gene001345.t1 MTR_7g062600 31.987 297 181 10 55 340 48 334 5.91e-43 152
MS.gene001345.t1 MTR_4g087140 32.335 334 189 12 36 340 3 328 8.35e-43 152
MS.gene001345.t1 MTR_4g024660 32.822 326 187 11 47 351 54 368 2.63e-42 151
MS.gene001345.t1 MTR_8g469400 33.019 318 184 11 47 351 54 355 5.55e-42 150
MS.gene001345.t1 MTR_7g081710 30.667 300 181 7 55 340 46 332 6.58e-42 149
MS.gene001345.t1 MTR_8g009080 33.333 309 158 10 58 341 94 379 6.59e-42 150
MS.gene001345.t1 MTR_7g102720 31.544 298 181 7 54 341 33 317 1.45e-41 148
MS.gene001345.t1 MTR_8g009160 32.154 311 176 10 51 341 51 346 2.17e-41 148
MS.gene001345.t1 MTR_3g026150 29.921 254 166 5 102 353 6 249 4.08e-41 145
MS.gene001345.t1 MTR_5g011250 30.631 333 210 8 22 340 13 338 4.98e-41 147
MS.gene001345.t1 MTR_3g091360 32.237 304 181 7 55 345 49 340 7.11e-41 147
MS.gene001345.t1 MTR_3g043900 27.362 307 201 5 43 340 41 334 8.21e-41 147
MS.gene001345.t1 MTR_0009s0050 34.043 235 144 5 108 339 4 230 1.16e-40 144
MS.gene001345.t1 MTR_0009s0050 34.043 235 144 5 108 339 4 230 1.35e-40 144
MS.gene001345.t1 MTR_2g069010 30.745 322 177 10 48 343 59 360 1.49e-40 147
MS.gene001345.t1 MTR_3g045230 29.412 306 197 7 43 340 41 335 1.69e-40 146
MS.gene001345.t1 MTR_8g075830 31.071 280 165 7 55 318 36 303 2.20e-40 146
MS.gene001345.t1 MTR_0032s0040 32.381 315 180 11 44 339 53 353 3.29e-40 145
MS.gene001345.t1 MTR_7g062560 29.191 346 199 14 14 340 16 334 3.63e-40 145
MS.gene001345.t1 MTR_1g093110 29.942 344 204 13 25 351 40 363 5.10e-40 145
MS.gene001345.t1 MTR_3g083370 30.233 301 184 8 56 345 2 287 6.89e-40 143
MS.gene001345.t1 MTR_4g096840 30.584 291 187 7 58 339 29 313 1.45e-39 143
MS.gene001345.t1 MTR_2g033270 31.908 304 185 10 46 339 7 298 1.94e-39 142
MS.gene001345.t1 MTR_2g069300 32.911 316 173 12 44 341 46 340 2.05e-39 143
MS.gene001345.t1 MTR_6g015950 28.947 304 198 8 54 350 35 327 2.17e-39 142
MS.gene001345.t1 MTR_8g009110 32.907 313 172 13 51 341 51 347 2.68e-39 143
MS.gene001345.t1 MTR_8g041620 32.931 331 186 13 40 351 50 363 3.03e-39 143
MS.gene001345.t1 MTR_2g437380 32.819 259 156 8 94 347 1 246 3.64e-39 140
MS.gene001345.t1 MTR_3g058610 31.429 280 164 7 55 318 36 303 3.74e-39 142
MS.gene001345.t1 MTR_1g070135 27.213 305 199 7 55 349 35 326 6.40e-39 141
MS.gene001345.t1 MTR_2g025120 28.523 298 185 9 56 340 2 284 8.14e-39 140
MS.gene001345.t1 MTR_3g117485 31.923 260 166 6 79 334 7 259 8.48e-39 139
MS.gene001345.t1 MTR_1g070120 27.869 305 197 7 55 349 35 326 9.13e-39 141
MS.gene001345.t1 MTR_2g069190 31.193 327 167 11 47 341 53 353 9.19e-39 142
MS.gene001345.t1 MTR_8g009170 31.511 311 179 11 51 341 51 347 1.34e-38 141
MS.gene001345.t1 MTR_8g041600 30.723 332 192 13 40 351 50 363 1.48e-38 141
MS.gene001345.t1 MTR_8g008930 31.494 308 169 9 55 339 57 345 1.54e-38 141
MS.gene001345.t1 MTR_3g117485 30.211 331 204 11 22 334 10 331 1.54e-38 140
MS.gene001345.t1 MTR_2g069210 33.123 317 166 13 51 341 53 349 1.72e-38 141
MS.gene001345.t1 MTR_5g005570 30.952 336 172 12 28 339 10 309 1.94e-38 140
MS.gene001345.t1 MTR_4g117880 33.113 302 174 10 54 339 56 345 2.23e-38 140
MS.gene001345.t1 MTR_8g062600 31.013 316 188 9 57 353 66 370 3.39e-38 140
MS.gene001345.t1 MTR_7g045650 30.065 306 183 9 1 300 22 302 3.48e-38 139
MS.gene001345.t1 MTR_1g048940 30.233 301 196 6 47 340 37 330 3.85e-38 140
MS.gene001345.t1 MTR_8g075890 30.714 280 166 7 55 318 36 303 5.17e-38 139
MS.gene001345.t1 MTR_2g069060 30.547 311 176 10 49 339 40 330 7.89e-38 139
MS.gene001345.t1 MTR_3g091350 32.143 308 176 12 55 345 56 347 9.74e-38 139
MS.gene001345.t1 MTR_8g028435 32.459 305 173 12 55 341 57 346 1.08e-37 139
MS.gene001345.t1 MTR_8g063070 31.988 322 171 13 44 341 58 355 1.20e-37 139
MS.gene001345.t1 MTR_7g451860 31.475 305 167 11 53 339 36 316 1.44e-37 138
MS.gene001345.t1 MTR_7g047670 31.475 305 167 11 53 339 36 316 1.44e-37 138
MS.gene001345.t1 MTR_4g087130 30.380 316 176 8 55 339 23 325 1.56e-37 138
MS.gene001345.t1 MTR_3g088565 29.927 274 177 5 57 323 2 267 1.75e-37 137
MS.gene001345.t1 MTR_2g068950 30.721 319 175 11 48 340 53 351 1.84e-37 138
MS.gene001345.t1 MTR_4g123020 29.352 293 185 7 58 339 20 301 2.30e-37 137
MS.gene001345.t1 MTR_2g069020 31.153 321 174 11 48 343 57 355 2.65e-37 138
MS.gene001345.t1 MTR_8g009090 32.268 313 173 11 55 348 57 349 2.69e-37 137
MS.gene001345.t1 MTR_1g070085 26.923 312 192 8 55 349 34 326 3.14e-37 137
MS.gene001345.t1 MTR_1g070085 26.923 312 192 8 55 349 34 326 3.14e-37 137
MS.gene001345.t1 MTR_5g065010 28.221 326 213 11 23 340 11 323 3.79e-37 137
MS.gene001345.t1 MTR_7g105070 30.503 318 185 9 52 347 53 356 3.91e-37 137
MS.gene001345.t1 MTR_2g068840 29.283 321 191 8 58 353 55 364 4.29e-37 137
MS.gene001345.t1 MTR_2g069020 31.153 321 174 11 48 343 57 355 5.68e-37 137
MS.gene001345.t1 MTR_5g055690 32.576 264 156 8 25 280 21 270 1.10e-36 134
MS.gene001345.t1 MTR_5g048850 32.922 243 140 7 53 282 39 271 1.23e-36 134
MS.gene001345.t1 MTR_0009s0050 43.382 136 75 2 205 339 14 148 2.40e-36 130
MS.gene001345.t1 MTR_8g093980 28.107 338 204 8 21 338 28 346 7.26e-36 134
MS.gene001345.t1 MTR_5g085330 29.000 300 189 8 57 344 4 291 8.14e-36 132
MS.gene001345.t1 MTR_0056s0160 32.479 234 144 6 122 352 1 223 8.87e-36 130
MS.gene001345.t1 MTR_2g068960 30.960 323 175 12 45 340 50 351 1.83e-35 133
MS.gene001345.t1 MTR_7g056347 31.525 295 172 11 61 340 75 354 2.14e-35 132
MS.gene001345.t1 MTR_5g022020 28.417 278 175 5 55 318 36 303 2.32e-35 132
MS.gene001345.t1 MTR_2g069090 30.032 313 164 11 58 341 68 354 2.98e-35 132
MS.gene001345.t1 MTR_4g074130 31.392 309 177 11 45 339 27 314 3.30e-35 132
MS.gene001345.t1 MTR_7g029655 32.484 314 171 12 58 351 67 359 4.41e-35 132
MS.gene001345.t1 MTR_1g070080 27.273 297 194 6 55 340 35 320 5.27e-35 131
MS.gene001345.t1 MTR_7g016090 28.620 297 184 8 57 340 38 319 5.99e-35 130
MS.gene001345.t1 MTR_7g016090 28.620 297 184 8 57 340 40 321 6.57e-35 130
MS.gene001345.t1 MTR_3g026150 30.403 273 157 8 22 280 29 282 1.31e-34 129
MS.gene001345.t1 MTR_1g086550 31.457 302 179 7 58 339 20 313 2.23e-34 129
MS.gene001345.t1 MTR_8g006930 32.381 315 174 13 50 341 57 355 4.04e-34 129
MS.gene001345.t1 MTR_2g083030 31.429 315 166 12 46 339 25 310 5.37e-34 128
MS.gene001345.t1 MTR_0009s0480 32.342 269 159 8 24 280 11 268 6.08e-34 126
MS.gene001345.t1 MTR_7g078010 32.907 313 169 13 52 341 61 355 6.35e-34 129
MS.gene001345.t1 MTR_5g025050 31.333 300 182 9 58 350 5 287 9.18e-34 127
MS.gene001345.t1 MTR_1g043760 28.923 325 200 10 44 352 40 349 3.25e-33 126
MS.gene001345.t1 MTR_8g030880 28.966 290 193 6 58 340 10 293 3.26e-33 125
MS.gene001345.t1 MTR_4g119410 30.864 324 168 12 57 351 66 362 6.76e-33 126
MS.gene001345.t1 MTR_1g070185 30.921 304 184 8 50 340 58 348 1.05e-32 125
MS.gene001345.t1 MTR_5g025090 30.820 305 185 12 57 351 4 292 1.55e-32 123
MS.gene001345.t1 MTR_1g062110 30.196 255 169 4 57 303 65 318 2.84e-32 123
MS.gene001345.t1 MTR_7g077670 29.431 299 197 7 49 340 2 293 4.38e-32 122
MS.gene001345.t1 MTR_2g072910 33.594 256 144 9 39 283 38 278 6.45e-32 121
MS.gene001345.t1 MTR_5g027230 31.399 293 174 13 56 339 4 278 1.13e-31 121
MS.gene001345.t1 MTR_7g056393 30.275 327 166 12 57 351 66 362 3.53e-31 121
MS.gene001345.t1 MTR_1g032140 30.693 303 187 9 58 351 66 354 7.27e-31 120
MS.gene001345.t1 MTR_1g043775 31.270 307 175 11 51 338 47 336 7.47e-31 120
MS.gene001345.t1 MTR_8g009120 31.935 310 167 13 51 341 51 335 1.01e-30 120
MS.gene001345.t1 MTR_6g092620 28.521 284 174 9 57 326 2 270 1.06e-30 119
MS.gene001345.t1 MTR_4g093840 28.955 335 207 10 20 340 30 347 1.27e-30 120
MS.gene001345.t1 MTR_1g070085 29.767 215 135 4 138 349 47 248 1.74e-30 117
MS.gene001345.t1 MTR_1g043810 30.255 314 183 11 44 338 40 336 1.95e-30 119
MS.gene001345.t1 MTR_3g464530 30.169 295 174 11 54 339 30 301 4.59e-30 117
MS.gene001345.t1 MTR_0009s0400 42.063 126 71 2 216 340 1 125 6.81e-30 112
MS.gene001345.t1 MTR_1g070100 30.097 206 131 3 138 340 43 238 1.19e-29 115
MS.gene001345.t1 MTR_8g009080 32.787 244 119 9 58 279 94 314 4.25e-29 115
MS.gene001345.t1 MTR_8g009080 32.780 241 117 9 58 276 94 311 2.65e-28 113
MS.gene001345.t1 MTR_1g032250 28.525 305 191 9 58 351 73 361 3.40e-28 113
MS.gene001345.t1 MTR_3g083370 29.339 242 146 7 56 286 2 229 4.20e-28 109
MS.gene001345.t1 MTR_8g041600 30.739 257 147 10 40 280 50 291 7.11e-28 111
MS.gene001345.t1 MTR_5g024940 30.345 290 162 12 56 339 4 259 3.24e-27 108
MS.gene001345.t1 MTR_8g009170 31.707 246 137 10 51 279 51 282 4.71e-27 108
MS.gene001345.t1 MTR_1g070135 28.139 231 146 6 55 275 35 255 6.67e-27 108
MS.gene001345.t1 MTR_2g025120 27.848 237 144 8 56 280 2 223 8.26e-27 106
MS.gene001345.t1 MTR_7g016080 25.246 305 196 9 47 340 30 313 8.48e-27 108
MS.gene001345.t1 MTR_2g069060 29.365 252 139 9 48 280 17 248 1.52e-26 106
MS.gene001345.t1 MTR_4g115990 27.961 304 185 9 40 334 26 304 2.33e-26 107
MS.gene001345.t1 MTR_1g032220 29.245 318 202 9 43 351 58 361 2.79e-26 108
MS.gene001345.t1 MTR_5g025060 28.000 300 171 12 56 350 4 263 4.56e-26 105
MS.gene001345.t1 MTR_2g068800 30.342 234 121 9 72 294 75 277 5.74e-26 105
MS.gene001345.t1 MTR_1g043770 27.243 301 161 10 53 327 48 316 2.89e-25 105
MS.gene001345.t1 MTR_8g009150 27.492 331 185 12 25 340 36 326 3.34e-25 104
MS.gene001345.t1 MTR_6g088665 29.412 323 176 14 56 343 19 324 1.76e-24 102
MS.gene001345.t1 MTR_6g088665 29.321 324 176 14 56 343 19 325 2.39e-24 102
MS.gene001345.t1 MTR_3g040410 26.159 302 197 9 58 346 6 294 3.73e-24 101
MS.gene001345.t1 MTR_7g056353 34.921 189 105 5 170 351 159 336 4.86e-24 103
MS.gene001345.t1 MTR_7g078010 33.740 246 128 11 52 280 61 288 6.21e-24 100
MS.gene001345.t1 MTR_1g043775 32.245 245 133 10 51 279 47 274 3.66e-23 98.2
MS.gene001345.t1 MTR_1g070110 28.571 203 108 2 138 340 50 215 4.11e-23 96.7
MS.gene001345.t1 MTR_8g102600 26.537 309 197 11 60 345 14 315 6.09e-23 98.2
MS.gene001345.t1 MTR_4g011720 26.000 300 202 6 52 340 3 293 6.98e-23 97.8
MS.gene001345.t1 MTR_4g132770 37.288 118 72 2 207 323 20 136 1.27e-22 93.2
MS.gene001345.t1 MTR_1g027290 27.445 317 180 11 53 340 24 319 1.36e-22 97.4
MS.gene001345.t1 MTR_1g043810 30.952 252 141 10 44 279 40 274 2.43e-22 96.3
MS.gene001345.t1 MTR_3g464530 29.918 244 146 11 46 280 25 252 9.72e-22 93.2
MS.gene001345.t1 MTR_4g100600 25.817 306 202 9 57 345 8 305 1.01e-21 94.7
MS.gene001345.t1 MTR_8g009180 37.313 134 79 3 219 348 152 284 4.40e-21 92.4
MS.gene001345.t1 MTR_6g035160 39.831 118 70 1 224 340 43 160 7.98e-21 89.0
MS.gene001345.t1 MTR_7g090520 25.503 298 196 9 49 332 1 286 7.96e-20 89.4
MS.gene001345.t1 MTR_4g011690 26.102 295 197 6 58 340 9 294 3.80e-19 87.0
MS.gene001345.t1 MTR_1g043770 29.707 239 142 7 53 279 48 272 5.67e-19 86.3
MS.gene001345.t1 MTR_4g100590 26.129 310 191 13 57 345 8 300 9.52e-19 85.9
MS.gene001345.t1 MTR_1g011600 27.798 277 175 8 69 334 33 295 3.19e-18 84.3
MS.gene001345.t1 MTR_1g043840 29.814 161 101 3 149 309 38 186 1.53e-16 80.1
MS.gene001345.t1 MTR_4g021360 25.912 274 170 10 86 340 37 296 1.42e-15 77.0
MS.gene001345.t1 MTR_4g021380 24.359 312 196 10 54 340 3 299 1.61e-15 76.6
MS.gene001345.t1 MTR_8g102600 25.735 272 175 10 94 345 1 265 2.33e-15 75.9
MS.gene001345.t1 MTR_4g011720 25.000 240 160 6 52 280 3 233 5.49e-15 74.3
MS.gene001345.t1 MTR_3g108520 24.912 285 184 9 69 340 31 298 6.18e-15 75.1
MS.gene001345.t1 MTR_4g100590 29.508 122 81 2 228 345 133 253 2.16e-13 69.7
MS.gene001345.t1 MTR_0009s0410 30.370 135 82 4 23 152 18 145 1.52e-11 62.8
MS.gene001345.t1 MTR_1g032240 41.935 93 43 3 219 310 64 146 1.56e-11 62.8
MS.gene001345.t1 MTR_2g072930 33.588 131 69 5 39 159 38 160 3.84e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001345.t1 AT1G15550 59.887 354 136 4 1 352 1 350 6.08e-152 432
MS.gene001345.t1 AT1G80340 55.840 351 143 4 3 352 4 343 2.35e-136 392
MS.gene001345.t1 AT1G80330 53.274 336 154 3 21 353 12 347 8.00e-122 355
MS.gene001345.t1 AT4G21690 43.454 359 182 6 1 352 1 345 6.49e-102 304
MS.gene001345.t1 AT2G38240 36.000 300 179 7 47 339 38 331 2.41e-55 185
MS.gene001345.t1 AT4G25300 35.548 301 175 7 51 340 45 337 7.93e-54 181
MS.gene001345.t1 AT3G11180 36.082 291 172 6 57 339 94 378 7.96e-54 182
MS.gene001345.t1 AT1G17010 35.216 301 178 6 51 341 47 340 8.27e-54 181
MS.gene001345.t1 AT3G11180 36.082 291 172 6 57 339 94 378 9.40e-54 182
MS.gene001345.t1 AT1G17020 33.234 334 194 8 24 339 16 338 4.47e-53 179
MS.gene001345.t1 AT4G25310 36.900 271 160 5 72 340 73 334 1.68e-51 175
MS.gene001345.t1 AT1G78550 34.754 305 175 8 49 340 44 337 6.51e-51 173
MS.gene001345.t1 AT5G05600 33.553 304 184 6 48 339 52 349 3.07e-50 172
MS.gene001345.t1 AT3G19010 32.381 315 177 9 56 345 26 329 3.38e-49 169
MS.gene001345.t1 AT3G19010 32.381 315 177 9 56 345 26 329 3.38e-49 169
MS.gene001345.t1 AT3G21420 33.742 326 193 9 27 339 27 342 6.00e-49 168
MS.gene001345.t1 AT2G36690 32.424 330 209 5 18 340 22 344 6.22e-49 168
MS.gene001345.t1 AT2G36690 32.424 330 209 5 18 340 22 344 6.22e-49 168
MS.gene001345.t1 AT5G20400 32.479 351 206 9 18 350 2 339 7.25e-48 165
MS.gene001345.t1 AT3G55970 33.117 308 178 7 50 339 44 341 1.13e-46 162
MS.gene001345.t1 AT1G60980 33.228 316 181 6 58 353 57 362 1.54e-46 162
MS.gene001345.t1 AT3G13610 32.515 326 192 11 25 340 35 342 1.72e-46 162
MS.gene001345.t1 AT2G44800 32.997 297 184 5 53 341 47 336 4.46e-46 160
MS.gene001345.t1 AT5G51810 32.362 309 190 4 57 353 62 363 2.16e-45 159
MS.gene001345.t1 AT1G49390 31.624 351 209 9 18 350 2 339 2.59e-45 158
MS.gene001345.t1 AT1G30040 32.317 328 199 8 28 345 4 318 6.38e-45 157
MS.gene001345.t1 AT4G25420 33.651 315 180 7 58 353 61 365 1.13e-44 157
MS.gene001345.t1 AT1G55290 31.928 332 197 12 25 347 34 345 1.54e-44 157
MS.gene001345.t1 AT4G16330 30.141 355 224 10 1 342 4 347 3.00e-44 156
MS.gene001345.t1 AT3G60290 32.534 292 182 5 57 340 51 335 9.32e-44 154
MS.gene001345.t1 AT1G78550 34.981 263 156 6 83 340 7 259 1.04e-43 152
MS.gene001345.t1 AT3G19010 31.148 305 164 9 56 345 26 299 2.03e-43 152
MS.gene001345.t1 AT5G08640 30.928 291 190 5 55 339 40 325 5.19e-43 152
MS.gene001345.t1 AT5G08640 30.928 291 190 5 55 339 40 325 5.19e-43 152
MS.gene001345.t1 AT4G10500 28.613 346 213 10 21 353 13 337 1.69e-42 151
MS.gene001345.t1 AT5G07200 31.646 316 189 5 58 353 58 366 2.36e-42 151
MS.gene001345.t1 AT5G54000 32.722 327 193 10 26 338 17 330 3.16e-42 150
MS.gene001345.t1 AT3G19000 31.153 321 190 9 55 352 29 341 5.77e-42 150
MS.gene001345.t1 AT5G59540 31.013 316 184 9 43 339 46 346 2.03e-41 149
MS.gene001345.t1 AT1G77330 32.472 271 166 6 57 318 2 264 3.55e-41 146
MS.gene001345.t1 AT4G10490 29.195 298 185 9 57 340 41 326 4.66e-41 147
MS.gene001345.t1 AT1G44090 31.461 356 195 10 9 338 21 353 5.21e-41 148
MS.gene001345.t1 AT1G62380 30.137 292 179 9 59 340 8 284 1.13e-40 145
MS.gene001345.t1 AT1G04380 30.421 309 176 10 50 339 37 325 6.42e-40 144
MS.gene001345.t1 AT5G07480 31.410 312 186 9 53 346 39 340 6.73e-40 144
MS.gene001345.t1 AT4G21200 28.399 331 184 10 23 339 22 313 7.07e-40 144
MS.gene001345.t1 AT1G12010 30.479 292 178 8 59 340 8 284 8.22e-40 143
MS.gene001345.t1 AT1G78440 28.990 307 198 6 56 352 16 312 1.52e-39 143
MS.gene001345.t1 AT5G43440 30.488 328 201 9 25 339 32 345 5.35e-39 142
MS.gene001345.t1 AT1G49390 32.714 269 169 6 85 350 1 260 5.51e-39 140
MS.gene001345.t1 AT5G20550 30.973 339 198 12 18 334 2 326 2.61e-38 140
MS.gene001345.t1 AT5G59530 30.408 319 190 9 50 351 50 353 3.10e-38 140
MS.gene001345.t1 AT1G06650 31.013 316 170 10 57 348 63 354 3.49e-38 140
MS.gene001345.t1 AT3G51240 30.065 306 186 8 33 318 5 302 5.61e-38 139
MS.gene001345.t1 AT5G43450 30.503 318 183 9 41 339 44 342 1.28e-37 138
MS.gene001345.t1 AT1G06645 31.908 304 166 9 57 339 76 359 1.77e-37 138
MS.gene001345.t1 AT1G06620 32.051 312 166 9 52 339 56 345 2.59e-37 137
MS.gene001345.t1 AT4G22880 28.889 315 205 7 43 343 32 341 5.63e-37 137
MS.gene001345.t1 AT4G22880 28.889 315 205 7 43 343 32 341 5.63e-37 137
MS.gene001345.t1 AT4G22880 28.889 315 205 7 43 343 32 341 5.63e-37 137
MS.gene001345.t1 AT2G34555 30.903 288 186 7 58 339 27 307 7.48e-37 135
MS.gene001345.t1 AT5G54000 33.462 260 157 7 85 338 1 250 1.33e-36 133
MS.gene001345.t1 AT3G12900 28.159 277 184 5 68 340 72 337 6.81e-36 134
MS.gene001345.t1 AT3G61400 29.967 307 177 9 57 339 59 351 2.10e-35 132
MS.gene001345.t1 AT1G05010 29.893 281 171 9 56 324 2 268 2.60e-35 131
MS.gene001345.t1 AT5G24530 29.321 324 199 10 28 339 15 320 1.24e-34 130
MS.gene001345.t1 AT4G25300 39.773 176 99 3 166 340 74 243 2.56e-34 127
MS.gene001345.t1 AT1G06640 29.688 320 171 11 56 348 62 354 4.94e-34 129
MS.gene001345.t1 AT5G63590 30.350 257 166 6 54 303 10 260 1.59e-33 126
MS.gene001345.t1 AT2G19590 31.429 280 168 10 57 326 10 275 3.59e-33 125
MS.gene001345.t1 AT1G02400 29.730 296 182 8 59 339 25 309 4.26e-33 125
MS.gene001345.t1 AT4G25310 32.103 271 145 6 72 340 73 306 6.94e-33 125
MS.gene001345.t1 AT5G63600 26.333 300 202 7 53 345 28 315 7.38e-33 125
MS.gene001345.t1 AT5G63595 28.723 282 157 8 46 317 16 263 3.38e-32 122
MS.gene001345.t1 AT1G04350 29.747 316 188 11 52 351 52 349 3.78e-32 124
MS.gene001345.t1 AT5G63600 26.246 301 202 8 53 345 28 316 6.55e-32 122
MS.gene001345.t1 AT5G51810 33.195 241 142 4 57 285 62 295 9.98e-32 121
MS.gene001345.t1 AT1G47990 29.032 310 187 9 48 339 5 299 1.11e-31 122
MS.gene001345.t1 AT1G50960 29.487 312 184 9 46 339 21 314 1.34e-31 122
MS.gene001345.t1 AT5G43935 28.763 299 175 11 55 343 16 286 1.62e-31 120
MS.gene001345.t1 AT5G07480 33.498 203 124 4 149 346 35 231 3.95e-31 118
MS.gene001345.t1 AT5G51310 31.715 309 175 15 55 340 2 297 9.36e-31 119
MS.gene001345.t1 AT4G25420 34.711 242 129 7 58 280 61 292 1.65e-30 118
MS.gene001345.t1 AT3G50210 26.023 342 189 12 52 345 2 327 2.79e-30 118
MS.gene001345.t1 AT3G50210 26.023 342 189 12 52 345 2 327 2.79e-30 118
MS.gene001345.t1 AT3G50210 26.023 342 189 12 52 345 2 327 2.79e-30 118
MS.gene001345.t1 AT2G30830 30.375 293 154 12 75 347 80 342 3.18e-30 118
MS.gene001345.t1 AT3G19010 30.677 251 138 9 56 281 26 265 7.10e-30 116
MS.gene001345.t1 AT5G05600 30.204 245 153 6 48 280 52 290 8.21e-30 116
MS.gene001345.t1 AT3G19000 31.325 249 140 9 55 280 29 269 1.10e-29 115
MS.gene001345.t1 AT4G16330 32.796 186 114 3 157 342 67 241 4.70e-29 113
MS.gene001345.t1 AT2G30840 27.221 349 185 12 25 339 29 342 6.35e-29 115
MS.gene001345.t1 AT1G30040 30.798 263 159 8 28 280 4 253 6.83e-29 113
MS.gene001345.t1 AT5G43440 29.811 265 162 8 25 279 32 282 1.09e-28 113
MS.gene001345.t1 AT1G03400 28.522 291 187 8 57 339 55 332 1.15e-28 114
MS.gene001345.t1 AT5G12270 29.866 298 185 10 56 340 54 340 1.48e-28 114
MS.gene001345.t1 AT1G03410 27.273 341 206 11 23 342 26 345 3.81e-28 113
MS.gene001345.t1 AT1G03410 27.273 341 206 11 23 342 63 382 6.37e-28 113
MS.gene001345.t1 AT3G51240 30.942 223 142 5 100 318 4 218 1.69e-27 109
MS.gene001345.t1 AT3G55970 29.719 249 147 7 50 280 44 282 2.38e-27 109
MS.gene001345.t1 AT2G25450 27.937 315 192 10 50 343 47 347 3.18e-27 110
MS.gene001345.t1 AT5G59540 29.134 254 149 8 43 280 46 284 4.00e-27 108
MS.gene001345.t1 AT1G04380 29.317 249 140 9 50 282 37 265 6.64e-27 107
MS.gene001345.t1 AT3G49630 27.812 320 189 12 55 340 6 317 1.01e-26 108
MS.gene001345.t1 AT5G43450 30.196 255 143 8 41 279 44 279 1.05e-26 107
MS.gene001345.t1 AT2G19590 31.325 249 153 9 82 326 26 260 1.82e-26 107
MS.gene001345.t1 AT3G49630 28.283 297 184 11 65 340 25 313 2.14e-26 107
MS.gene001345.t1 AT1G06620 31.174 247 131 7 52 279 56 282 2.72e-26 106
MS.gene001345.t1 AT5G58660 27.273 286 175 11 57 316 33 311 3.42e-26 107
MS.gene001345.t1 AT2G30840 27.143 350 178 14 25 339 29 336 1.33e-25 105
MS.gene001345.t1 AT1G14130 29.153 295 176 12 54 335 5 279 4.77e-25 103
MS.gene001345.t1 AT3G47190 24.399 291 176 9 44 310 18 288 5.66e-25 103
MS.gene001345.t1 AT1G06650 29.098 244 133 7 57 280 63 286 5.83e-25 103
MS.gene001345.t1 AT4G23340 30.363 303 189 10 49 340 1 292 1.23e-24 102
MS.gene001345.t1 AT1G14120 29.010 293 171 9 58 335 8 278 1.39e-24 102
MS.gene001345.t1 AT1G14120 29.010 293 171 9 58 335 8 278 1.39e-24 102
MS.gene001345.t1 AT1G14120 29.010 293 171 9 58 335 8 278 1.39e-24 102
MS.gene001345.t1 AT3G49620 26.073 303 168 10 55 318 31 316 2.00e-24 102
MS.gene001345.t1 AT3G61400 28.689 244 140 7 57 280 59 288 3.88e-24 100
MS.gene001345.t1 AT3G46500 27.900 319 200 13 46 343 3 312 1.53e-23 99.8
MS.gene001345.t1 AT5G63580 28.571 231 152 7 52 276 13 236 6.46e-23 96.3
MS.gene001345.t1 AT1G03400 26.019 319 187 9 57 339 55 360 7.08e-23 98.6
MS.gene001345.t1 AT5G63580 28.571 231 152 7 52 276 13 236 8.83e-23 96.3
MS.gene001345.t1 AT1G06640 27.076 277 160 11 57 308 63 322 1.37e-21 94.4
MS.gene001345.t1 AT3G46500 29.720 286 171 13 46 310 3 279 2.19e-21 93.2
MS.gene001345.t1 AT1G06640 29.289 239 135 9 56 277 62 283 3.86e-21 92.4
MS.gene001345.t1 AT1G35190 27.327 333 186 15 43 352 1 300 9.86e-21 91.7
MS.gene001345.t1 AT3G46490 27.445 317 193 14 56 345 15 321 2.13e-20 90.9
MS.gene001345.t1 AT1G35190 27.434 339 201 17 43 352 1 323 3.12e-20 90.5
MS.gene001345.t1 AT3G46490 29.749 279 159 14 56 307 15 283 3.87e-20 90.1
MS.gene001345.t1 AT1G52820 24.161 298 198 6 58 340 12 296 7.62e-20 89.4
MS.gene001345.t1 AT5G58660 25.490 255 156 11 57 286 33 278 1.14e-19 88.2
MS.gene001345.t1 AT3G50210 28.571 203 122 6 157 345 52 245 1.26e-19 87.4
MS.gene001345.t1 AT2G30840 25.784 287 145 11 25 279 29 279 4.28e-18 84.0
MS.gene001345.t1 AT3G49630 27.979 193 120 5 157 340 62 244 4.81e-18 83.2
MS.gene001345.t1 AT1G28030 26.144 306 184 11 51 332 6 293 5.86e-18 84.0
MS.gene001345.t1 AT1G02400 25.397 252 163 7 59 296 25 265 1.61e-17 81.6
MS.gene001345.t1 AT1G52800 24.503 302 193 9 49 332 1 285 3.19e-17 81.6
MS.gene001345.t1 AT4G03070 25.083 303 198 8 55 340 11 301 3.25e-16 79.0
MS.gene001345.t1 AT4G23340 34.234 111 73 0 230 340 64 174 1.36e-15 75.1
MS.gene001345.t1 AT3G46500 27.273 187 121 5 173 352 7 185 2.37e-14 71.2
MS.gene001345.t1 AT3G46500 26.984 189 123 5 171 352 67 247 5.22e-14 71.6
MS.gene001345.t1 AT3G46500 26.984 189 123 5 171 352 67 247 5.22e-14 71.6
MS.gene001345.t1 AT4G16765 30.000 120 79 2 230 345 77 195 1.98e-13 68.9
MS.gene001345.t1 AT4G16765 25.946 185 126 4 167 345 62 241 6.87e-13 68.2
MS.gene001345.t1 AT4G16765 25.946 185 126 4 167 345 62 241 6.87e-13 68.2
MS.gene001345.t1 AT4G16765 25.946 185 126 4 167 345 62 241 6.87e-13 68.2
MS.gene001345.t1 AT2G06960 33.793 145 81 5 196 340 10 139 6.90e-13 65.9
MS.gene001345.t1 AT3G46480 35.577 104 61 3 212 310 137 239 1.09e-12 68.2
MS.gene001345.t1 AT4G16765 27.684 177 117 4 167 337 62 233 1.38e-12 67.0
MS.gene001345.t1 AT1G52820 23.109 238 155 6 58 280 12 236 2.46e-12 66.6
MS.gene001345.t1 AT3G46500 30.612 147 87 5 171 310 67 205 6.25e-12 65.1
MS.gene001345.t1 AT3G46500 30.612 147 87 5 171 310 36 174 6.54e-12 64.3
MS.gene001345.t1 AT3G46500 30.612 147 87 5 171 310 36 174 6.54e-12 64.3

Find 0 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGTGTATATTGAATATT+AGG + 17049:12100-12119 MS.gene001345:intron 15.0%
!! AGTATTATTGGAATTAATAA+GGG - 17049:11647-11666 MS.gene001345:intergenic 15.0%
!! TAAAATAAATTAGTCAACAA+AGG - 17049:12252-12271 MS.gene001345:intergenic 15.0%
!! TAGTATTATTGGAATTAATA+AGG - 17049:11648-11667 MS.gene001345:intergenic 15.0%
!!! AATTATTATTTTTGTAGCAT+TGG - 17049:12194-12213 MS.gene001345:intergenic 15.0%
!! ATTAGGAAAAATCACATTTA+AGG - 17049:12542-12561 MS.gene001345:intergenic 20.0%
!! TAATTCCAATAATACTATGA+AGG + 17049:11651-11670 MS.gene001345:CDS 20.0%
! AAAAGGTCTCTTGTTAAAAA+AGG - 17049:12279-12298 MS.gene001345:intergenic 25.0%
! ACAGAAAATACCAAAACAAA+AGG - 17049:12296-12315 MS.gene001345:intergenic 25.0%
! AGATTTCAAACATAAACTAG+TGG - 17049:12473-12492 MS.gene001345:intergenic 25.0%
! ATCTTTGCTAATTGCATTAT+AGG - 17049:12363-12382 MS.gene001345:intergenic 25.0%
! GCATTATAGGATAAGAAAAT+GGG - 17049:12350-12369 MS.gene001345:intergenic 25.0%
! TGCATTATAGGATAAGAAAA+TGG - 17049:12351-12370 MS.gene001345:intergenic 25.0%
!! AGTTTATGTTTGAAATCTCT+TGG + 17049:12475-12494 MS.gene001345:intron 25.0%
!!! ATGAGAGTTTTATACGTATA+TGG + 17049:12387-12406 MS.gene001345:intron 25.0%
!!! CTATTAACTTTGAAGCATTT+GGG - 17049:11720-11739 MS.gene001345:intergenic 25.0%
!!! TTTTGTTTTGGTATTTTCTG+TGG + 17049:12295-12314 MS.gene001345:intron 25.0%
AAGACAAAACCACTGTTATT+AGG - 17049:12559-12578 MS.gene001345:intergenic 30.0%
ACTCTCCTTCATAGTATTAT+TGG - 17049:11659-11678 MS.gene001345:intergenic 30.0%
CCAAATGCTTCAAAGTTAAT+AGG + 17049:11718-11737 MS.gene001345:CDS 30.0%
TACAATGGAAGATATCGAAT+GGG + 17049:12665-12684 MS.gene001345:CDS 30.0%
TTACAATGGAAGATATCGAA+TGG + 17049:12664-12683 MS.gene001345:CDS 30.0%
! GTGATTTTTCCTAATAACAG+TGG + 17049:12547-12566 MS.gene001345:intron 30.0%
! TTGATCATTTTCGACAACTT+TGG + 17049:11971-11990 MS.gene001345:CDS 30.0%
!! CAAACATAAACTAGTGGATT+TGG - 17049:12467-12486 MS.gene001345:intergenic 30.0%
!! CCTATTAACTTTGAAGCATT+TGG - 17049:11721-11740 MS.gene001345:intergenic 30.0%
!! TAACAAGAGACCTTTTGTTT+TGG + 17049:12283-12302 MS.gene001345:intron 30.0%
AACTTCCTGAATCATACACT+TGG + 17049:11602-11621 MS.gene001345:CDS 35.0%
ACAAATCTCTACATTGGATG+GGG - 17049:13021-13040 MS.gene001345:intergenic 35.0%
ACAGGCTTTCTCATCAAATT+GGG - 17049:12703-12722 MS.gene001345:intergenic 35.0%
AGTTGTCGAAAATGATCAAG+AGG - 17049:11970-11989 MS.gene001345:intergenic 35.0%
ATGTGGACAAATCTCTACAT+TGG - 17049:13027-13046 MS.gene001345:intergenic 35.0%
ATTTCATCAAGGAGGCTTAT+TGG - 17049:11793-11812 MS.gene001345:intergenic 35.0%
CAAGCCATTGAATTTCATCA+AGG - 17049:11804-11823 MS.gene001345:intergenic 35.0%
CTTGATGAAATTCAATGGCT+TGG + 17049:11802-11821 MS.gene001345:CDS 35.0%
CTTTCCCAAAATGACATAAG+CGG + 17049:12816-12835 MS.gene001345:CDS 35.0%
GAAACTAATGTGGCTAATGT+TGG + 17049:12629-12648 MS.gene001345:CDS 35.0%
GACAAATCTCTACATTGGAT+GGG - 17049:13022-13041 MS.gene001345:intergenic 35.0%
GTTGTCGAAAATGATCAAGA+GGG - 17049:11969-11988 MS.gene001345:intergenic 35.0%
TCACATTTAAGGACAGTGTT+AGG - 17049:12531-12550 MS.gene001345:intergenic 35.0%
TGAAGCCATGAAAAAGTTAG+CGG + 17049:12605-12624 MS.gene001345:CDS 35.0%
TGGCTATTTAGACTTAGTAG+TGG + 17049:12495-12514 MS.gene001345:intron 35.0%
TGGGTCATTGAGATCAATAA+CGG - 17049:11701-11720 MS.gene001345:intergenic 35.0%
TGTCCACATGAGAAATTAGT+AGG + 17049:13038-13057 MS.gene001345:CDS 35.0%
TTACCCTTTCATTCTTCCAA+GGG - 17049:12422-12441 MS.gene001345:intergenic 35.0%
TTGTCGAAAATGATCAAGAG+GGG - 17049:11968-11987 MS.gene001345:intergenic 35.0%
TTTCATCAAGGAGGCTTATT+GGG - 17049:11792-11811 MS.gene001345:intergenic 35.0%
TTTCCCAAAATGACATAAGC+GGG + 17049:12817-12836 MS.gene001345:CDS 35.0%
TTTCGGTTGCCTATTTGTAT+GGG + 17049:12994-13013 MS.gene001345:CDS 35.0%
! CTATTCCACATTTTGTCGAA+CGG + 17049:12918-12937 MS.gene001345:CDS 35.0%
! CTTGTAGTGAGTTGAAATCA+GGG - 17049:11582-11601 MS.gene001345:intergenic 35.0%
! GAAAATGGGCTTGTATAGTT+TGG - 17049:12336-12355 MS.gene001345:intergenic 35.0%
! TAATAAGGGTGTGATCATCA+AGG - 17049:11633-11652 MS.gene001345:intergenic 35.0%
! TCTTGTAGTGAGTTGAAATC+AGG - 17049:11583-11602 MS.gene001345:intergenic 35.0%
! TTTTCGGTTGCCTATTTGTA+TGG + 17049:12993-13012 MS.gene001345:CDS 35.0%
!!! AACGAATGGCTTTGAGTTTT+TGG - 17049:11855-11874 MS.gene001345:intergenic 35.0%
AAGCCATGAAAAAGTTAGCG+GGG + 17049:12607-12626 MS.gene001345:CDS 40.0%
ACAATCCGTTCGACAAAATG+TGG - 17049:12926-12945 MS.gene001345:intergenic 40.0%
ACACGTATCTTGAAGATGGT+TGG - 17049:12149-12168 MS.gene001345:intergenic 40.0%
AGGACATGCATGCAAAACAT+GGG + 17049:11738-11757 MS.gene001345:CDS 40.0%
CAAATCTCTACATTGGATGG+GGG - 17049:13020-13039 MS.gene001345:intergenic 40.0%
CAACCCTTGGAAGAATGAAA+GGG + 17049:12416-12435 MS.gene001345:intron 40.0%
CAAGTCACTGACCTATAAAG+GGG - 17049:13077-13096 MS.gene001345:intergenic 40.0%
CACAGGCTTTCTCATCAAAT+TGG - 17049:12704-12723 MS.gene001345:intergenic 40.0%
CAGTGTTTGGCATAATCTTG+AGG - 17049:11997-12016 MS.gene001345:intergenic 40.0%
CCAAGTCACTGACCTATAAA+GGG - 17049:13078-13097 MS.gene001345:intergenic 40.0%
CGTTCGACAAAATGTGGAAT+AGG - 17049:12920-12939 MS.gene001345:intergenic 40.0%
CTCAAGATTATGCCAAACAC+TGG + 17049:11995-12014 MS.gene001345:CDS 40.0%
GAAGCCATGAAAAAGTTAGC+GGG + 17049:12606-12625 MS.gene001345:CDS 40.0%
GCCATTGAATTTCATCAAGG+AGG - 17049:11801-11820 MS.gene001345:intergenic 40.0%
GCCTCCTTGATGAAATTCAA+TGG + 17049:11797-11816 MS.gene001345:CDS 40.0%
GGACAAATCTCTACATTGGA+TGG - 17049:13023-13042 MS.gene001345:intergenic 40.0%
GGACTCTCTTGGTATTACAA+TGG + 17049:12650-12669 MS.gene001345:CDS 40.0%
GGGTCATTGAGATCAATAAC+GGG - 17049:11700-11719 MS.gene001345:intergenic 40.0%
GTTACCCTTTCATTCTTCCA+AGG - 17049:12423-12442 MS.gene001345:intergenic 40.0%
TAGGACATGCATGCAAAACA+TGG + 17049:11737-11756 MS.gene001345:CDS 40.0%
TATAAAGGGGAGGTTGTGTT+GGG - 17049:13064-13083 MS.gene001345:intergenic 40.0%
TCACACACGTATCTTGAAGA+TGG - 17049:12153-12172 MS.gene001345:intergenic 40.0%
TCCAAGTCACTGACCTATAA+AGG - 17049:13079-13098 MS.gene001345:intergenic 40.0%
TGTGTCCAAGTGTATGATTC+AGG - 17049:11610-11629 MS.gene001345:intergenic 40.0%
! GTAGCATTGGATGAGAATTG+AGG - 17049:12181-12200 MS.gene001345:intergenic 40.0%
! TTCTGTGGTGACGATACAAA+TGG + 17049:12310-12329 MS.gene001345:intron 40.0%
!! AATGCTTTGCTTTTGTGCCA+AGG - 17049:13109-13128 MS.gene001345:intergenic 40.0%
!!! CAACCCGCTTATGTCATTTT+GGG - 17049:12823-12842 MS.gene001345:intergenic 40.0%
!!! CGCTTATGTCATTTTGGGAA+AGG - 17049:12818-12837 MS.gene001345:intergenic 40.0%
!!! GCTTTGAGTTTTTGGTGAGA+GGG - 17049:11847-11866 MS.gene001345:intergenic 40.0%
!!! TTTCCCCGCTAACTTTTTCA+TGG - 17049:12613-12632 MS.gene001345:intergenic 40.0%
AACATGGGGTGTGTATCAAG+TGG + 17049:11753-11772 MS.gene001345:CDS 45.0%
AAGTTCAACGAGAAGGTTCC+GGG + 17049:12844-12863 MS.gene001345:CDS 45.0%
AGAAATGTTGAGTCCGTGTG+CGG - 17049:12789-12808 MS.gene001345:intergenic 45.0%
AGAAGCCTATAGAGCTCATC+CGG + 17049:11537-11556 MS.gene001345:CDS 45.0%
AGTTAGCGGGGAAACTAATG+TGG + 17049:12619-12638 MS.gene001345:CDS 45.0%
ATAACCTGAAACACCATCCG+GGG - 17049:11878-11897 MS.gene001345:intergenic 45.0%
ATGGAAGATATCGAATGGGC+TGG + 17049:12669-12688 MS.gene001345:CDS 45.0%
CAACACAACCTCCCCTTTAT+AGG + 17049:13063-13082 MS.gene001345:CDS 45.0%
CAAGTTCAACGAGAAGGTTC+CGG + 17049:12843-12862 MS.gene001345:CDS 45.0%
CATAACCTGAAACACCATCC+GGG - 17049:11879-11898 MS.gene001345:intergenic 45.0%
CCAACCCTTGGAAGAATGAA+AGG + 17049:12415-12434 MS.gene001345:intron 45.0%
CCATAACCTGAAACACCATC+CGG - 17049:11880-11899 MS.gene001345:intergenic 45.0%
CCCTTTATAGGTCAGTGACT+TGG + 17049:13075-13094 MS.gene001345:CDS 45.0%
CCTTTCATTCTTCCAAGGGT+TGG - 17049:12418-12437 MS.gene001345:intergenic 45.0%
CTATAAAGGGGAGGTTGTGT+TGG - 17049:13065-13084 MS.gene001345:intergenic 45.0%
GGACATGCATGCAAAACATG+GGG + 17049:11739-11758 MS.gene001345:CDS 45.0%
GGGCCTACTAATTTCTCATG+TGG - 17049:13044-13063 MS.gene001345:intergenic 45.0%
GTGTATCAAGTGGTGAACCA+TGG + 17049:11763-11782 MS.gene001345:CDS 45.0%
TACCGACACTTACCAGTGTT+TGG - 17049:12010-12029 MS.gene001345:intergenic 45.0%
TCCAACGATGGTAAATCCCT+CGG - 17049:11944-11963 MS.gene001345:intergenic 45.0%
TGCCAAACACTGGTAAGTGT+CGG + 17049:12005-12024 MS.gene001345:intron 45.0%
TGCTTGTGGTTAACATGCAC+CGG - 17049:11559-11578 MS.gene001345:intergenic 45.0%
TGGCTAATGTTGGACTCTCT+TGG + 17049:12639-12658 MS.gene001345:CDS 45.0%
TGTACACAAGTGTGCTCCAT+CGG + 17049:12943-12962 MS.gene001345:CDS 45.0%
TTCATTCTTCCAAGGGTTGG+TGG - 17049:12415-12434 MS.gene001345:intergenic 45.0%
TTCGGTTCACTAAAACCCGA+TGG - 17049:12962-12981 MS.gene001345:intergenic 45.0%
! AGTTGAAATCAGGGTGCTTG+TGG - 17049:11573-11592 MS.gene001345:intergenic 45.0%
! CTATAGGCTTCTGAGAGTGA+AGG - 17049:11529-11548 MS.gene001345:intergenic 45.0%
! GTGACTTGGAATGAGTACCT+TGG + 17049:13089-13108 MS.gene001345:CDS 45.0%
! TCATTCTTCCAAGGGTTGGT+GGG - 17049:12414-12433 MS.gene001345:intergenic 45.0%
!! GCAACCCGCTTATGTCATTT+TGG - 17049:12824-12843 MS.gene001345:intergenic 45.0%
!!! GAGTTTTTGGTGAGAGGGAA+GGG - 17049:11842-11861 MS.gene001345:intergenic 45.0%
!!! GGCTTTGAGTTTTTGGTGAG+AGG - 17049:11848-11867 MS.gene001345:intergenic 45.0%
!!! TGAGTTTTTGGTGAGAGGGA+AGG - 17049:11843-11862 MS.gene001345:intergenic 45.0%
AAATGTTGAGTCCGTGTGCG+GGG - 17049:12787-12806 MS.gene001345:intergenic 50.0%
ACTCAAAGCCATTCGTTCCC+CGG + 17049:11858-11877 MS.gene001345:CDS 50.0%
AGGCAACCGAAAACCTCTGA+CGG - 17049:12986-13005 MS.gene001345:intergenic 50.0%
ATCAAGAGGGGATCCAACGA+TGG - 17049:11956-11975 MS.gene001345:intergenic 50.0%
ATGCACCGGATGAGCTCTAT+AGG - 17049:11545-11564 MS.gene001345:intergenic 50.0%
CAACTCCTACCCTAGTTGTC+CGG + 17049:12737-12756 MS.gene001345:CDS 50.0%
CATGAGTTTGGGGAAGAAGG+AGG - 17049:11917-11936 MS.gene001345:intergenic 50.0%
CCACATGAGTTTGGGGAAGA+AGG - 17049:11920-11939 MS.gene001345:intergenic 50.0%
CCTTCTTCCCCAAACTCATG+TGG + 17049:11917-11936 MS.gene001345:CDS 50.0%
GAAATGTTGAGTCCGTGTGC+GGG - 17049:12788-12807 MS.gene001345:intergenic 50.0%
GGGTTGCAAGTTCAACGAGA+AGG + 17049:12837-12856 MS.gene001345:CDS 50.0%
GTACACAAGTGTGCTCCATC+GGG + 17049:12944-12963 MS.gene001345:CDS 50.0%
GTCACTGACCTATAAAGGGG+AGG - 17049:13074-13093 MS.gene001345:intergenic 50.0%
TATATGGACCCACCAACCCT+TGG + 17049:12403-12422 MS.gene001345:intron 50.0%
TCCGAGGGATTTACCATCGT+TGG + 17049:11940-11959 MS.gene001345:CDS 50.0%
! AGGGTAGGAGTTGAGTTGCA+TGG - 17049:12730-12749 MS.gene001345:intergenic 50.0%
!! CCGGATGGTGTTTCAGGTTA+TGG + 17049:11877-11896 MS.gene001345:CDS 50.0%
AAAGCCATTCGTTCCCCGGA+TGG + 17049:11862-11881 MS.gene001345:CDS 55.0%
AACACCATCCGGGGAACGAA+TGG - 17049:11869-11888 MS.gene001345:intergenic 55.0%
AGAAGGAGGAGATGCGAGCT+AGG - 17049:11903-11922 MS.gene001345:intergenic 55.0%
CCCAAACTCATGTGGTCCGA+GGG + 17049:11925-11944 MS.gene001345:CDS 55.0%
CCCTCGGACCACATGAGTTT+GGG - 17049:11928-11947 MS.gene001345:intergenic 55.0%
CCTCGGACCACATGAGTTTG+GGG - 17049:11927-11946 MS.gene001345:intergenic 55.0%
CTACCCTAGTTGTCCGGATC+CGG + 17049:12743-12762 MS.gene001345:CDS 55.0%
GATCCGGATCCGGACAACTA+GGG - 17049:12749-12768 MS.gene001345:intergenic 55.0%
GGAGGCTTATTGGGATGCCA+TGG - 17049:11783-11802 MS.gene001345:intergenic 55.0%
GGATGGGGGCCCATACAAAT+AGG - 17049:13006-13025 MS.gene001345:intergenic 55.0%
GGCAACCGAAAACCTCTGAC+GGG - 17049:12985-13004 MS.gene001345:intergenic 55.0%
TAGTGAACCGAACCCGTCAG+AGG + 17049:12970-12989 MS.gene001345:CDS 55.0%
TCAACGAGAAGGTTCCGGGT+GGG + 17049:12848-12867 MS.gene001345:CDS 55.0%
TCCCTCGGACCACATGAGTT+TGG - 17049:11929-11948 MS.gene001345:intergenic 55.0%
TGATCCGGATCCGGACAACT+AGG - 17049:12750-12769 MS.gene001345:intergenic 55.0%
TTCAACGAGAAGGTTCCGGG+TGG + 17049:12847-12866 MS.gene001345:CDS 55.0%
! CCGAACCCGTCAGAGGTTTT+CGG + 17049:12977-12996 MS.gene001345:CDS 55.0%
! GGCTTCTGAGAGTGAAGGCA+TGG - 17049:11524-11543 MS.gene001345:intergenic 55.0%
! GTTGAGTTGCATGGCTGCAC+AGG - 17049:12721-12740 MS.gene001345:intergenic 55.0%
!! CCGAAAACCTCTGACGGGTT+CGG - 17049:12980-12999 MS.gene001345:intergenic 55.0%
ACCACGAGTCCTCCATGGAG+TGG - 17049:12885-12904 MS.gene001345:intergenic 60.0%
ACGAGTCCTCCATGGAGTGG+GGG - 17049:12882-12901 MS.gene001345:intergenic 60.0%
ACTGTACCCCCACTCCATGG+AGG + 17049:12873-12892 MS.gene001345:CDS 60.0%
CACGAGTCCTCCATGGAGTG+GGG - 17049:12883-12902 MS.gene001345:intergenic 60.0%
CCACGAGTCCTCCATGGAGT+GGG - 17049:12884-12903 MS.gene001345:intergenic 60.0%
CCCCAAACTCATGTGGTCCG+AGG + 17049:11924-11943 MS.gene001345:CDS 60.0%
CGGATCCGGACAACTAGGGT+AGG - 17049:12745-12764 MS.gene001345:intergenic 60.0%
CGTTCCCCGGATGGTGTTTC+AGG + 17049:11871-11890 MS.gene001345:CDS 60.0%
CGTTGACCACGAGTCCTCCA+TGG - 17049:12890-12909 MS.gene001345:intergenic 60.0%
GGAGGACTCGTGGTCAACGT+AGG + 17049:12891-12910 MS.gene001345:CDS 60.0%
GTCACTGTACCCCCACTCCA+TGG + 17049:12870-12889 MS.gene001345:CDS 60.0%
CCCACTCCATGGAGGACTCG+TGG + 17049:12881-12900 MS.gene001345:CDS 65.0%
CCCATGGCGTGATCCGGATC+CGG - 17049:12759-12778 MS.gene001345:intergenic 65.0%
CCGGATCCGGATCACGCCAT+GGG + 17049:12756-12775 MS.gene001345:CDS 65.0%
GCGAGACCCATGGCGTGATC+CGG - 17049:12765-12784 MS.gene001345:intergenic 65.0%
TCCGGATCCGGATCACGCCA+TGG + 17049:12755-12774 MS.gene001345:CDS 65.0%
! TGGGGGTACAGTGACCCACC+CGG - 17049:12865-12884 MS.gene001345:intergenic 65.0%
CATGGGTCTCGCCCCGCACA+CGG + 17049:12773-12792 MS.gene001345:CDS 70.0%
CGTGTGCGGGGCGAGACCCA+TGG - 17049:12775-12794 MS.gene001345:intergenic 75.0%


Chromosome Type Strat End Strand Name
17049 gene 11523 13148 11523 ID=MS.gene001345
17049 mRNA 11523 13148 11523 ID=MS.gene001345.t1;Parent=MS.gene001345
17049 exon 11523 12016 11523 ID=MS.gene001345.t1.exon1;Parent=MS.gene001345.t1
17049 CDS 11523 12016 11523 ID=cds.MS.gene001345.t1;Parent=MS.gene001345.t1
17049 exon 12584 13148 12584 ID=MS.gene001345.t1.exon2;Parent=MS.gene001345.t1
17049 CDS 12584 13148 12584 ID=cds.MS.gene001345.t1;Parent=MS.gene001345.t1
Gene Sequence

>MS.gene001345

ATGCCTTCACTCTCAGAAGCCTATAGAGCTCATCCGGTGCATGTTAACCACAAGCACCCTGATTTCAACTCACTACAAGAACTTCCTGAATCATACACTTGGACACACCTTGATGATCACACCCTTATTAATTCCAATAATACTATGAAGGAGAGTGCTAATAGTAGTAGTGTTCCCGTTATTGATCTCAATGACCCAAATGCTTCAAAGTTAATAGGACATGCATGCAAAACATGGGGTGTGTATCAAGTGGTGAACCATGGCATCCCAATAAGCCTCCTTGATGAAATTCAATGGCTTGGACAAACTCTCTTCACCCTTCCCTCTCACCAAAAACTCAAAGCCATTCGTTCCCCGGATGGTGTTTCAGGTTATGGCCTAGCTCGCATCTCCTCCTTCTTCCCCAAACTCATGTGGTCCGAGGGATTTACCATCGTTGGATCCCCTCTTGATCATTTTCGACAACTTTGGCCTCAAGATTATGCCAAACACTGGTAAGTGTCGGTAAGAGTCTTACATTAGATATAATATACTTTAAGTAAAATATTATTTTTCAACTTATACACGTCGATTAACTAATTGTGTATATTGAATATTAGGTCTAACTTAAGTTTTAAGATATTCCAACCATCTTCAAGATACGTGTGTGATGTATCCTCAATTCTCATCCAATGCTACAAAAATAATAATTAAGCTAACTAACTACATTTTTCTCTTAATTCTTATCCTTTGTTGACTAATTTATTTTATTTTCCTTTTTTAACAAGAGACCTTTTGTTTTGGTATTTTCTGTGGTGACGATACAAATGGCCAAACTATACAAGCCCATTTTCTTATCCTATAATGCAATTAGCAAAGATCACAATGAGAGTTTTATACGTATATGGACCCACCAACCCTTGGAAGAATGAAAGGGTAACTGAACATGAGAATCTATTGCACCAAATCCACTAGTTTATGTTTGAAATCTCTTGGCTATTTAGACTTAGTAGTGGTGTGATTTTTCCTAACACTGTCCTTAAATGTGATTTTTCCTAATAACAGTGGTTTTGTCTTTTCAGTGATACTGTCTTGCAATATGATGAAGCCATGAAAAAGTTAGCGGGGAAACTAATGTGGCTAATGTTGGACTCTCTTGGTATTACAATGGAAGATATCGAATGGGCTGGCTCAAAAGCCCAATTTGATGAGAAAGCCTGTGCAGCCATGCAACTCAACTCCTACCCTAGTTGTCCGGATCCGGATCACGCCATGGGTCTCGCCCCGCACACGGACTCAACATTTCTAACGATCCTTTCCCAAAATGACATAAGCGGGTTGCAAGTTCAACGAGAAGGTTCCGGGTGGGTCACTGTACCCCCACTCCATGGAGGACTCGTGGTCAACGTAGGCGACCTATTCCACATTTTGTCGAACGGATTGTACACAAGTGTGCTCCATCGGGTTTTAGTGAACCGAACCCGTCAGAGGTTTTCGGTTGCCTATTTGTATGGGCCCCCATCCAATGTAGAGATTTGTCCACATGAGAAATTAGTAGGCCCAACACAACCTCCCCTTTATAGGTCAGTGACTTGGAATGAGTACCTTGGCACAAAAGCAAAGCATTTCAACAAAGCACTCTCATCC
Protein sequence

>MS.gene001345.t1

MPSLSEAYRAHPVHVNHKHPDFNSLQELPESYTWTHLDDHTLINSNNTMKESANSSSVPVIDLNDPNASKLIGHACKTWGVYQVVNHGIPISLLDEIQWLGQTLFTLPSHQKLKAIRSPDGVSGYGLARISSFFPKLMWSEGFTIVGSPLDHFRQLWPQDYAKHCDTVLQYDEAMKKLAGKLMWLMLDSLGITMEDIEWAGSKAQFDEKACAAMQLNSYPSCPDPDHAMGLAPHTDSTFLTILSQNDISGLQVQREGSGWVTVPPLHGGLVVNVGDLFHILSNGLYTSVLHRVLVNRTRQRFSVAYLYGPPSNVEICPHEKLVGPTQPPLYRSVTWNEYLGTKAKHFNKALSS