AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039309

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039309.t1 MTR_2g072890 93.872 359 22 0 1 359 1 359 0.0 696
MS.gene039309.t1 MTR_2g072910 80.501 359 69 1 1 359 1 358 0.0 596
MS.gene039309.t1 MTR_2g072910 81.720 279 50 1 1 279 1 278 3.11e-167 468
MS.gene039309.t1 MTR_8g064200 59.714 350 139 2 9 358 10 357 1.49e-152 434
MS.gene039309.t1 MTR_8g064200 59.714 350 139 2 9 358 15 362 3.17e-152 433
MS.gene039309.t1 MTR_5g048570 57.265 351 145 3 9 359 5 350 6.12e-151 429
MS.gene039309.t1 MTR_5g055680 56.410 351 150 2 9 359 5 352 2.92e-148 422
MS.gene039309.t1 MTR_5g048850 56.857 350 148 2 9 358 5 351 1.94e-147 421
MS.gene039309.t1 MTR_0009s0050 56.410 351 150 2 9 359 5 352 4.64e-147 419
MS.gene039309.t1 MTR_0009s0050 56.410 351 150 2 9 359 5 352 7.25e-147 419
MS.gene039309.t1 MTR_5g048470 57.062 354 149 3 6 358 7 358 1.29e-146 419
MS.gene039309.t1 MTR_0328s0030 55.491 346 151 2 10 355 4 346 4.89e-146 417
MS.gene039309.t1 MTR_5g055690 56.695 351 148 3 9 358 5 352 1.04e-143 411
MS.gene039309.t1 MTR_5g055820 56.447 349 148 3 9 356 5 350 2.07e-143 410
MS.gene039309.t1 MTR_5g048740 54.857 350 154 3 10 358 4 350 2.83e-143 410
MS.gene039309.t1 MTR_5g055900 53.561 351 160 2 9 359 5 352 1.58e-141 405
MS.gene039309.t1 MTR_5g048550 55.714 350 152 2 9 358 5 351 3.24e-141 405
MS.gene039309.t1 MTR_0009s0480 51.567 351 167 2 8 358 3 350 1.58e-138 398
MS.gene039309.t1 MTR_5g055800 51.841 353 164 4 8 358 2 350 2.76e-133 384
MS.gene039309.t1 MTR_1g033810 50.852 352 165 3 10 359 10 355 4.88e-121 353
MS.gene039309.t1 MTR_5g048850 58.364 269 109 2 9 277 5 270 2.88e-115 336
MS.gene039309.t1 MTR_0009s0050 57.371 251 107 0 109 359 4 254 2.61e-109 320
MS.gene039309.t1 MTR_0009s0050 57.371 251 107 0 109 359 4 254 2.87e-109 320
MS.gene039309.t1 MTR_5g055690 57.993 269 109 3 9 276 5 270 3.26e-109 320
MS.gene039309.t1 MTR_0009s0480 54.275 269 120 2 8 276 3 268 5.70e-108 317
MS.gene039309.t1 MTR_0056s0160 60.851 235 92 0 123 357 1 235 1.31e-107 315
MS.gene039309.t1 MTR_3g026150 44.540 348 187 4 10 355 17 360 2.13e-100 301
MS.gene039309.t1 MTR_2g072930 79.070 172 35 1 1 172 1 171 3.39e-93 276
MS.gene039309.t1 MTR_2g437380 40.517 348 198 5 14 356 14 357 6.47e-89 272
MS.gene039309.t1 MTR_7g062580 38.793 348 207 4 11 356 14 357 4.36e-87 267
MS.gene039309.t1 MTR_7g063730 38.617 347 209 4 11 356 23 366 2.95e-86 265
MS.gene039309.t1 MTR_7g062600 40.571 350 199 7 11 356 10 354 4.80e-86 264
MS.gene039309.t1 MTR_7g062570 39.655 348 204 5 11 356 14 357 1.67e-85 263
MS.gene039309.t1 MTR_7g062550 38.968 349 205 6 11 356 19 362 4.26e-83 257
MS.gene039309.t1 MTR_3g026150 45.353 269 142 3 10 276 17 282 3.95e-79 244
MS.gene039309.t1 MTR_3g026150 44.706 255 140 1 101 355 4 257 1.11e-76 237
MS.gene039309.t1 MTR_7g068650 37.082 329 196 4 17 335 15 342 8.06e-76 238
MS.gene039309.t1 MTR_3g117420 38.644 295 178 2 48 339 48 342 1.69e-75 237
MS.gene039309.t1 MTR_7g045650 41.429 280 160 3 11 289 19 295 2.62e-75 236
MS.gene039309.t1 MTR_2g437380 41.825 263 152 1 95 356 1 263 8.78e-75 232
MS.gene039309.t1 MTR_5g082750 38.580 324 193 4 17 335 14 336 1.64e-74 234
MS.gene039309.t1 MTR_3g070860 36.728 324 199 4 17 335 15 337 1.23e-73 233
MS.gene039309.t1 MTR_4g015790 35.777 341 199 5 14 335 11 350 1.01e-71 228
MS.gene039309.t1 MTR_8g074050 37.176 347 205 5 16 355 14 354 9.28e-71 225
MS.gene039309.t1 MTR_0009s0050 58.140 172 72 0 188 359 1 172 9.40e-71 219
MS.gene039309.t1 MTR_3g063180 37.249 349 205 8 17 356 10 353 1.07e-69 222
MS.gene039309.t1 MTR_8g074070 35.159 347 212 5 16 355 14 354 1.64e-69 222
MS.gene039309.t1 MTR_7g062560 34.795 342 209 6 15 355 25 353 3.71e-68 218
MS.gene039309.t1 MTR_4g116010 34.203 345 218 4 12 355 12 348 2.45e-65 211
MS.gene039309.t1 MTR_1g062110 34.375 352 213 8 17 355 27 373 5.69e-65 211
MS.gene039309.t1 MTR_8g074070 34.682 346 196 6 16 355 14 335 7.11e-65 209
MS.gene039309.t1 MTR_3g092890 33.746 323 202 5 27 345 13 327 2.53e-63 205
MS.gene039309.t1 MTR_3g117485 36.957 322 194 6 16 330 12 331 7.13e-63 204
MS.gene039309.t1 MTR_5g065010 36.080 352 201 10 16 355 3 342 2.26e-62 203
MS.gene039309.t1 MTR_0009s0400 55.782 147 65 0 212 358 1 147 6.76e-62 195
MS.gene039309.t1 MTR_7g102820 35.465 344 196 7 17 341 26 362 2.00e-61 202
MS.gene039309.t1 MTR_8g024120 33.524 349 221 8 11 355 2 343 4.62e-61 199
MS.gene039309.t1 MTR_5g032870 32.110 327 216 5 19 340 5 330 1.15e-55 186
MS.gene039309.t1 MTR_3g072810 33.333 330 201 9 14 335 3 321 2.50e-55 184
MS.gene039309.t1 MTR_1g034140 33.443 305 177 7 51 338 26 321 5.58e-55 184
MS.gene039309.t1 MTR_7g105070 31.014 345 221 7 22 357 28 364 9.73e-55 184
MS.gene039309.t1 MTR_3g117485 36.863 255 157 3 79 330 6 259 1.26e-53 178
MS.gene039309.t1 MTR_3g091350 32.184 348 222 7 14 354 20 360 1.58e-53 181
MS.gene039309.t1 MTR_3g072820 31.845 336 211 7 14 344 7 329 3.84e-53 179
MS.gene039309.t1 MTR_5g011250 32.622 328 198 8 17 327 8 329 8.34e-53 178
MS.gene039309.t1 MTR_1g034120 35.034 294 168 8 53 328 33 321 1.24e-52 178
MS.gene039309.t1 MTR_1g034060 35.374 294 167 8 53 328 33 321 1.34e-52 178
MS.gene039309.t1 MTR_7g081710 30.836 347 225 10 16 355 13 351 7.44e-52 176
MS.gene039309.t1 MTR_0009s0410 51.553 161 74 3 8 167 2 159 1.07e-51 169
MS.gene039309.t1 MTR_5g059130 30.746 335 216 7 17 344 6 331 4.40e-51 173
MS.gene039309.t1 MTR_5g032880 31.402 328 211 5 19 341 5 323 1.38e-50 179
MS.gene039309.t1 MTR_5g032880 31.498 327 218 5 19 340 343 668 2.68e-49 176
MS.gene039309.t1 MTR_4g087110 32.927 328 192 9 52 357 26 347 5.75e-50 171
MS.gene039309.t1 MTR_2g025120 31.667 300 191 7 53 347 5 295 7.57e-50 169
MS.gene039309.t1 MTR_5g059140 31.579 323 201 6 14 325 3 316 8.76e-50 170
MS.gene039309.t1 MTR_1g048940 30.857 350 220 9 21 359 16 354 9.21e-50 171
MS.gene039309.t1 MTR_8g033380 33.013 312 190 6 25 324 29 333 1.24e-49 171
MS.gene039309.t1 MTR_3g088565 33.218 289 174 5 50 327 1 281 1.29e-49 169
MS.gene039309.t1 MTR_8g075890 34.572 269 172 3 51 316 38 305 1.31e-49 170
MS.gene039309.t1 MTR_8g009090 28.235 340 229 8 23 355 33 364 1.39e-49 170
MS.gene039309.t1 MTR_8g028435 28.613 346 220 8 23 355 33 364 1.60e-49 170
MS.gene039309.t1 MTR_1g093110 27.726 321 215 7 44 355 62 374 3.66e-49 169
MS.gene039309.t1 MTR_8g008930 29.032 341 226 8 23 355 33 365 5.82e-49 169
MS.gene039309.t1 MTR_3g088745 32.407 324 195 7 30 340 23 335 6.62e-49 168
MS.gene039309.t1 MTR_8g009110 29.355 310 209 5 52 355 60 365 7.27e-49 168
MS.gene039309.t1 MTR_8g009170 28.035 346 224 9 23 355 33 366 7.68e-49 168
MS.gene039309.t1 MTR_4g093840 32.102 352 220 9 16 355 22 366 9.29e-49 168
MS.gene039309.t1 MTR_4g087090 31.356 354 214 11 24 357 2 346 1.11e-48 167
MS.gene039309.t1 MTR_8g009160 28.571 315 214 6 47 355 55 364 3.49e-48 166
MS.gene039309.t1 MTR_2g102570 32.776 299 185 6 45 336 45 334 4.11e-48 166
MS.gene039309.t1 MTR_2g069300 28.387 310 211 5 52 355 54 358 5.59e-48 166
MS.gene039309.t1 MTR_4g087120 32.573 307 180 8 52 336 26 327 7.53e-48 165
MS.gene039309.t1 MTR_3g091360 32.298 322 205 6 39 354 39 353 1.23e-47 165
MS.gene039309.t1 MTR_3g043900 31.339 351 197 9 26 355 26 353 1.30e-47 165
MS.gene039309.t1 MTR_6g015950 32.812 320 200 7 27 340 14 324 1.59e-47 164
MS.gene039309.t1 MTR_4g087140 34.333 300 169 9 52 328 26 320 2.06e-47 164
MS.gene039309.t1 MTR_1g062110 34.564 298 176 9 16 299 26 318 2.12e-47 163
MS.gene039309.t1 MTR_2g069060 29.900 301 203 5 44 341 41 336 5.01e-47 163
MS.gene039309.t1 MTR_1g093140 26.966 356 236 8 17 355 30 378 7.22e-47 163
MS.gene039309.t1 MTR_1g093120 28.125 352 230 9 17 355 29 370 7.44e-47 163
MS.gene039309.t1 MTR_3g083370 30.508 295 188 7 52 341 4 286 7.57e-47 162
MS.gene039309.t1 MTR_5g022020 34.074 270 172 4 51 316 38 305 1.06e-46 162
MS.gene039309.t1 MTR_7g016090 29.653 317 211 5 27 339 14 322 4.36e-46 160
MS.gene039309.t1 MTR_7g016090 29.653 317 211 5 27 339 16 324 4.48e-46 160
MS.gene039309.t1 MTR_2g068950 29.070 344 227 8 17 349 27 364 4.88e-46 161
MS.gene039309.t1 MTR_3g058610 32.841 271 174 5 51 316 38 305 5.26e-46 160
MS.gene039309.t1 MTR_8g075830 33.829 269 174 3 51 316 38 305 5.50e-46 161
MS.gene039309.t1 MTR_8g041620 29.769 346 223 9 23 356 38 375 6.45e-46 161
MS.gene039309.t1 MTR_2g068960 28.696 345 229 7 16 349 26 364 7.76e-46 160
MS.gene039309.t1 MTR_6g464620 31.475 305 197 5 29 324 43 344 1.01e-45 160
MS.gene039309.t1 MTR_3g045230 30.110 362 207 10 16 355 17 354 1.33e-45 159
MS.gene039309.t1 MTR_2g069090 28.615 325 223 4 36 355 52 372 1.52e-45 160
MS.gene039309.t1 MTR_5g085330 30.263 304 198 6 50 347 3 298 2.61e-45 158
MS.gene039309.t1 MTR_1g102070 32.353 306 193 7 29 324 38 339 3.07e-45 159
MS.gene039309.t1 MTR_8g009080 29.605 304 204 6 50 348 92 390 4.77e-45 159
MS.gene039309.t1 MTR_8g041600 29.275 345 226 9 23 356 38 375 5.54e-45 159
MS.gene039309.t1 MTR_2g083000 32.986 288 176 8 51 335 32 305 6.08e-45 157
MS.gene039309.t1 MTR_2g069210 28.797 316 211 7 48 355 58 367 6.52e-45 158
MS.gene039309.t1 MTR_1g032140 30.178 338 218 9 22 351 34 361 8.72e-45 157
MS.gene039309.t1 MTR_2g069010 27.762 353 235 9 17 357 33 377 1.06e-44 158
MS.gene039309.t1 MTR_7g056347 27.714 350 235 9 16 355 32 373 1.27e-44 157
MS.gene039309.t1 MTR_4g087100 32.727 330 190 11 52 357 26 347 1.55e-44 157
MS.gene039309.t1 MTR_0032s0040 27.066 351 232 8 23 357 33 375 3.56e-44 156
MS.gene039309.t1 MTR_2g069020 29.641 334 221 8 16 341 30 357 3.62e-44 156
MS.gene039309.t1 MTR_3g096500 32.468 308 196 7 29 327 45 349 4.79e-44 156
MS.gene039309.t1 MTR_4g117880 28.875 329 215 11 16 335 27 345 5.42e-44 155
MS.gene039309.t1 MTR_2g069020 28.940 349 234 8 16 356 30 372 5.80e-44 156
MS.gene039309.t1 MTR_8g062600 27.358 318 210 8 50 355 65 373 1.34e-43 155
MS.gene039309.t1 MTR_1g070080 29.607 331 212 8 20 340 5 324 1.38e-43 154
MS.gene039309.t1 MTR_2g083030 32.177 317 189 10 27 335 12 310 1.42e-43 154
MS.gene039309.t1 MTR_2g069190 28.526 312 207 6 52 355 68 371 1.83e-43 154
MS.gene039309.t1 MTR_7g102720 31.013 316 199 8 47 355 32 335 2.30e-43 153
MS.gene039309.t1 MTR_4g115990 30.435 299 184 5 52 349 46 321 3.19e-43 152
MS.gene039309.t1 MTR_1g070135 29.206 315 217 5 28 340 14 324 3.71e-43 153
MS.gene039309.t1 MTR_1g081840 30.769 312 203 6 25 327 29 336 8.04e-43 153
MS.gene039309.t1 MTR_1g011580 30.323 310 201 7 52 359 63 359 2.46e-42 151
MS.gene039309.t1 MTR_1g070085 28.000 325 225 5 20 340 5 324 6.46e-42 149
MS.gene039309.t1 MTR_1g070085 28.000 325 225 5 20 340 5 324 6.46e-42 149
MS.gene039309.t1 MTR_4g024660 25.816 337 230 9 31 355 45 373 1.13e-41 149
MS.gene039309.t1 MTR_8g063070 26.100 341 236 8 16 347 32 365 1.18e-41 149
MS.gene039309.t1 MTR_2g068840 29.360 344 223 8 23 355 27 361 1.18e-41 149
MS.gene039309.t1 MTR_1g070120 28.660 321 215 7 26 340 12 324 1.31e-41 149
MS.gene039309.t1 MTR_1g032250 29.706 340 221 8 23 354 42 371 4.19e-41 148
MS.gene039309.t1 MTR_5g005570 30.508 295 184 7 46 335 31 309 1.06e-40 146
MS.gene039309.t1 MTR_1g032220 29.118 340 223 8 23 354 42 371 2.41e-40 146
MS.gene039309.t1 MTR_7g016080 28.349 321 206 8 27 340 14 317 2.82e-40 145
MS.gene039309.t1 MTR_4g119410 27.164 335 228 8 31 355 45 373 1.01e-39 144
MS.gene039309.t1 MTR_1g043760 28.571 322 219 6 23 339 25 340 1.36e-39 144
MS.gene039309.t1 MTR_8g006930 27.794 349 236 8 16 355 32 373 2.98e-39 143
MS.gene039309.t1 MTR_4g087130 34.237 295 174 7 52 328 26 318 4.40e-39 142
MS.gene039309.t1 MTR_6g092620 31.655 278 171 8 50 319 1 267 1.16e-38 140
MS.gene039309.t1 MTR_7g451860 29.932 294 182 8 50 335 39 316 2.54e-38 140
MS.gene039309.t1 MTR_7g047670 29.932 294 182 8 50 335 39 316 2.54e-38 140
MS.gene039309.t1 MTR_8g093930 28.349 321 214 8 27 337 24 338 4.23e-38 140
MS.gene039309.t1 MTR_8g009150 25.217 345 214 8 23 355 33 345 7.36e-38 139
MS.gene039309.t1 MTR_7g056393 26.398 322 222 7 43 355 58 373 8.31e-38 139
MS.gene039309.t1 MTR_7g029655 27.607 326 215 10 25 342 41 353 1.13e-37 139
MS.gene039309.t1 MTR_1g043810 27.139 339 235 7 23 355 25 357 1.34e-37 138
MS.gene039309.t1 MTR_8g009120 25.797 345 220 9 23 355 33 353 6.50e-37 136
MS.gene039309.t1 MTR_1g043770 28.086 324 218 7 23 338 25 341 8.32e-37 136
MS.gene039309.t1 MTR_2g019370 30.392 306 189 10 52 344 28 322 1.40e-36 135
MS.gene039309.t1 MTR_1g070185 28.485 330 220 10 23 346 39 358 1.69e-36 135
MS.gene039309.t1 MTR_8g461330 30.000 320 199 10 51 356 26 334 6.65e-36 133
MS.gene039309.t1 MTR_8g469400 25.298 336 220 10 31 355 45 360 5.65e-35 131
MS.gene039309.t1 MTR_3g040410 31.834 289 185 8 52 335 6 287 7.32e-35 130
MS.gene039309.t1 MTR_2g070870 30.508 295 179 11 33 319 14 290 8.50e-35 130
MS.gene039309.t1 MTR_1g043775 27.609 297 203 7 44 334 46 336 3.85e-34 129
MS.gene039309.t1 MTR_4g074130 29.104 268 159 9 50 303 38 288 6.97e-34 128
MS.gene039309.t1 MTR_7g078010 26.687 326 224 6 23 339 38 357 9.72e-34 128
MS.gene039309.t1 MTR_4g123020 30.195 308 183 13 52 344 20 310 1.08e-33 127
MS.gene039309.t1 MTR_8g093980 30.462 325 204 10 25 335 34 350 2.27e-33 127
MS.gene039309.t1 MTR_2g068800 29.496 278 159 9 23 290 27 277 4.66e-33 124
MS.gene039309.t1 MTR_2g033270 30.892 314 188 12 50 351 17 313 1.02e-32 124
MS.gene039309.t1 MTR_1g070085 33.696 184 121 1 157 340 64 246 1.31e-32 123
MS.gene039309.t1 MTR_2g069060 29.508 244 165 4 35 276 10 248 1.51e-32 122
MS.gene039309.t1 MTR_1g070100 34.239 184 120 1 157 340 60 242 2.52e-32 122
MS.gene039309.t1 MTR_2g025120 30.702 228 145 6 53 276 5 223 3.18e-32 120
MS.gene039309.t1 MTR_8g009170 27.899 276 176 8 23 287 33 296 6.29e-32 122
MS.gene039309.t1 MTR_3g083370 28.509 228 152 5 52 276 4 223 8.52e-31 117
MS.gene039309.t1 MTR_8g041600 30.268 261 168 8 23 276 38 291 1.68e-30 118
MS.gene039309.t1 MTR_4g132770 38.760 129 77 1 211 337 28 156 2.51e-30 114
MS.gene039309.t1 MTR_1g086550 26.685 356 204 11 34 356 2 333 1.07e-29 117
MS.gene039309.t1 MTR_4g100600 30.892 314 182 11 48 340 5 304 4.08e-29 115
MS.gene039309.t1 MTR_8g009180 28.070 228 146 4 137 348 62 287 1.21e-28 113
MS.gene039309.t1 MTR_1g070135 28.287 251 174 5 28 276 14 260 3.85e-28 111
MS.gene039309.t1 MTR_7g056353 25.275 273 193 3 88 354 79 346 4.59e-28 114
MS.gene039309.t1 MTR_8g009080 29.825 228 153 5 50 275 92 314 7.52e-28 111
MS.gene039309.t1 MTR_3g464530 28.148 270 170 7 52 312 34 288 7.92e-28 111
MS.gene039309.t1 MTR_1g027290 29.217 332 203 11 26 337 1 320 1.23e-27 111
MS.gene039309.t1 MTR_8g102600 28.720 289 182 10 73 340 29 314 3.29e-27 110
MS.gene039309.t1 MTR_8g009080 29.778 225 151 5 50 272 92 311 7.54e-27 109
MS.gene039309.t1 MTR_4g096840 28.369 282 186 9 75 344 45 322 1.10e-26 108
MS.gene039309.t1 MTR_1g043810 28.516 256 174 6 23 275 25 274 4.91e-26 106
MS.gene039309.t1 MTR_1g043770 28.125 256 173 6 23 275 25 272 1.13e-25 105
MS.gene039309.t1 MTR_6g088665 29.210 291 180 12 73 340 38 325 1.30e-25 105
MS.gene039309.t1 MTR_1g027310 27.097 310 175 8 28 327 20 288 1.70e-25 105
MS.gene039309.t1 MTR_6g088665 29.110 292 180 12 73 340 38 326 1.97e-25 105
MS.gene039309.t1 MTR_5g027230 27.397 292 193 7 48 335 2 278 4.36e-25 103
MS.gene039309.t1 MTR_4g100590 27.389 314 188 10 48 340 5 299 1.86e-24 102
MS.gene039309.t1 MTR_8g030880 28.986 276 169 12 50 312 8 269 2.53e-24 102
MS.gene039309.t1 MTR_1g070110 30.233 215 118 4 126 340 37 219 3.08e-24 99.8
MS.gene039309.t1 MTR_1g043775 26.848 257 177 7 23 275 25 274 1.14e-22 97.1
MS.gene039309.t1 MTR_5g025090 26.132 287 199 6 52 337 5 279 1.67e-22 96.3
MS.gene039309.t1 MTR_7g078010 26.459 257 180 5 23 276 38 288 4.06e-22 95.5
MS.gene039309.t1 MTR_7g090520 27.817 284 191 8 52 328 10 286 7.47e-22 95.1
MS.gene039309.t1 MTR_3g464530 28.205 234 144 7 52 276 34 252 2.49e-21 92.0
MS.gene039309.t1 MTR_7g077670 26.316 304 202 11 44 337 3 294 3.66e-21 93.2
MS.gene039309.t1 MTR_4g011720 27.304 293 205 6 51 339 8 296 9.10e-21 91.7
MS.gene039309.t1 MTR_4g011690 28.479 309 202 12 51 349 8 307 8.11e-20 89.4
MS.gene039309.t1 MTR_1g043840 29.146 199 121 5 153 335 29 223 1.16e-19 89.0
MS.gene039309.t1 MTR_8g102600 28.016 257 161 10 105 340 11 264 3.73e-18 84.0
MS.gene039309.t1 MTR_4g100590 39.344 122 67 3 224 340 133 252 3.70e-17 80.9
MS.gene039309.t1 MTR_1g032240 32.432 148 72 5 208 354 57 177 1.14e-15 74.7
MS.gene039309.t1 MTR_4g021360 22.772 303 205 10 50 335 5 295 3.70e-15 75.9
MS.gene039309.t1 MTR_3g108520 23.871 310 219 11 48 345 3 307 5.25e-15 75.5
MS.gene039309.t1 MTR_4g021380 24.497 298 207 12 51 335 6 298 6.67e-13 68.9
MS.gene039309.t1 MTR_4g132765 32.000 125 75 4 51 174 3 118 2.47e-11 65.5
MS.gene039309.t1 MTR_3g040440 42.254 71 40 1 225 295 15 84 3.67e-11 63.2
MS.gene039309.t1 MTR_4g100600 28.194 227 134 9 48 258 5 218 9.26e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039309.t1 AT1G17020 57.263 358 150 2 1 355 1 358 1.67e-152 434
MS.gene039309.t1 AT4G25300 54.775 356 157 3 3 355 2 356 1.43e-144 413
MS.gene039309.t1 AT1G17010 55.801 362 151 4 1 356 1 359 2.88e-142 407
MS.gene039309.t1 AT1G78550 51.966 356 170 1 1 355 1 356 2.79e-134 387
MS.gene039309.t1 AT4G25310 55.241 353 153 3 5 355 4 353 1.15e-133 385
MS.gene039309.t1 AT4G25310 50.000 352 145 3 5 355 4 325 2.21e-112 330
MS.gene039309.t1 AT1G78550 54.745 274 124 0 82 355 5 278 2.65e-111 326
MS.gene039309.t1 AT3G21420 41.143 350 197 6 14 355 14 362 6.41e-89 272
MS.gene039309.t1 AT2G38240 40.491 326 183 5 16 335 11 331 4.25e-88 270
MS.gene039309.t1 AT5G05600 37.059 340 208 4 17 351 27 365 1.24e-78 246
MS.gene039309.t1 AT3G11180 35.756 344 207 5 3 335 38 378 2.79e-72 230
MS.gene039309.t1 AT3G11180 35.756 344 207 5 3 335 38 378 2.83e-72 230
MS.gene039309.t1 AT4G25300 54.974 191 85 1 166 355 72 262 7.18e-72 224
MS.gene039309.t1 AT5G54000 35.260 346 214 5 16 355 8 349 1.57e-68 219
MS.gene039309.t1 AT5G20400 35.045 331 206 6 16 339 8 336 1.23e-67 217
MS.gene039309.t1 AT3G55970 33.908 348 219 6 17 354 14 360 6.09e-67 215
MS.gene039309.t1 AT1G49390 34.535 333 205 8 16 339 8 336 1.93e-65 211
MS.gene039309.t1 AT5G20550 36.025 322 196 6 16 330 8 326 6.05e-65 210
MS.gene039309.t1 AT4G16330 34.169 319 194 6 40 353 55 362 1.18e-61 202
MS.gene039309.t1 AT5G05600 37.358 265 160 4 17 276 27 290 5.65e-60 195
MS.gene039309.t1 AT5G24530 32.024 331 216 4 27 353 13 338 5.72e-60 197
MS.gene039309.t1 AT4G10490 31.339 351 229 7 8 354 2 344 1.23e-59 196
MS.gene039309.t1 AT5G54000 36.531 271 169 2 86 355 1 269 2.68e-59 192
MS.gene039309.t1 AT4G10500 32.530 332 212 7 29 354 20 345 2.70e-59 195
MS.gene039309.t1 AT1G55290 35.072 345 201 12 17 351 26 357 2.03e-58 193
MS.gene039309.t1 AT3G13610 32.951 349 212 11 16 355 26 361 4.19e-57 190
MS.gene039309.t1 AT2G36690 32.378 349 224 7 17 357 21 365 1.12e-56 189
MS.gene039309.t1 AT2G36690 32.378 349 224 7 17 357 21 365 1.12e-56 189
MS.gene039309.t1 AT1G49390 35.135 259 161 4 86 339 1 257 1.78e-55 183
MS.gene039309.t1 AT3G19010 33.861 316 186 7 31 328 6 316 2.12e-54 182
MS.gene039309.t1 AT3G19010 33.861 316 186 7 31 328 6 316 2.12e-54 182
MS.gene039309.t1 AT5G59540 31.195 343 220 7 23 355 30 366 1.12e-52 178
MS.gene039309.t1 AT4G22880 33.033 333 201 9 12 327 2 329 1.88e-52 177
MS.gene039309.t1 AT4G22880 33.033 333 201 9 12 327 2 329 1.88e-52 177
MS.gene039309.t1 AT4G22880 33.033 333 201 9 12 327 2 329 1.88e-52 177
MS.gene039309.t1 AT3G19000 33.115 305 179 7 51 336 31 329 1.05e-51 176
MS.gene039309.t1 AT4G16330 35.521 259 158 4 99 353 3 256 2.25e-51 172
MS.gene039309.t1 AT5G08640 34.375 288 180 5 52 335 43 325 9.38e-51 172
MS.gene039309.t1 AT5G08640 34.375 288 180 5 52 335 43 325 9.38e-51 172
MS.gene039309.t1 AT4G25420 32.039 309 199 5 27 327 38 343 4.63e-50 172
MS.gene039309.t1 AT5G59530 30.205 341 225 6 23 355 29 364 7.42e-50 171
MS.gene039309.t1 AT1G12010 29.508 305 202 5 46 347 1 295 2.35e-49 168
MS.gene039309.t1 AT3G55970 34.444 270 166 6 17 276 14 282 3.01e-49 167
MS.gene039309.t1 AT3G60290 31.503 346 223 8 16 354 15 353 4.44e-49 169
MS.gene039309.t1 AT3G12900 32.164 342 213 10 23 356 27 357 5.04e-49 169
MS.gene039309.t1 AT1G77330 32.313 294 182 4 50 335 1 285 1.95e-48 166
MS.gene039309.t1 AT3G51240 31.922 307 196 6 16 316 5 304 1.45e-47 165
MS.gene039309.t1 AT1G06650 28.916 332 211 8 35 355 52 369 1.67e-47 165
MS.gene039309.t1 AT3G19010 33.228 316 158 9 31 328 6 286 2.41e-47 163
MS.gene039309.t1 AT1G62380 28.758 306 203 7 46 347 1 295 6.00e-47 162
MS.gene039309.t1 AT2G30830 29.651 344 220 9 23 355 26 358 8.99e-47 163
MS.gene039309.t1 AT5G07480 30.857 350 218 10 21 356 16 355 9.84e-47 162
MS.gene039309.t1 AT5G43440 26.686 341 238 5 23 355 29 365 1.05e-46 163
MS.gene039309.t1 AT5G63590 35.374 294 178 9 48 335 10 297 1.06e-46 161
MS.gene039309.t1 AT1G06620 29.299 314 210 6 48 355 58 365 1.08e-46 163
MS.gene039309.t1 AT2G44800 31.105 344 227 9 16 354 15 353 1.16e-46 162
MS.gene039309.t1 AT5G07200 33.115 305 185 8 29 320 37 335 4.48e-46 161
MS.gene039309.t1 AT1G78440 33.442 308 178 11 52 345 18 312 1.62e-45 159
MS.gene039309.t1 AT1G05010 31.270 307 189 8 52 347 4 299 1.83e-45 158
MS.gene039309.t1 AT2G30840 28.902 346 224 10 23 355 26 362 2.09e-45 159
MS.gene039309.t1 AT1G04350 29.874 318 202 10 48 355 54 360 7.19e-45 158
MS.gene039309.t1 AT1G04380 30.655 336 215 10 27 355 21 345 8.89e-45 157
MS.gene039309.t1 AT5G43450 29.299 314 206 6 49 355 58 362 1.30e-44 157
MS.gene039309.t1 AT1G60980 32.476 311 195 6 29 327 36 343 4.60e-44 156
MS.gene039309.t1 AT1G06640 28.443 334 210 10 35 355 52 369 7.96e-44 155
MS.gene039309.t1 AT1G44090 31.699 306 197 7 29 326 43 344 9.76e-43 153
MS.gene039309.t1 AT1G15550 30.530 321 202 8 29 338 30 340 1.82e-42 151
MS.gene039309.t1 AT2G30840 28.324 346 220 11 23 355 26 356 1.09e-41 149
MS.gene039309.t1 AT1G80340 28.923 325 216 5 20 338 18 333 1.11e-41 149
MS.gene039309.t1 AT5G51810 31.561 301 181 8 27 314 40 328 1.93e-41 149
MS.gene039309.t1 AT5G12270 29.769 346 229 8 17 355 21 359 3.82e-41 148
MS.gene039309.t1 AT1G06645 28.354 328 215 8 35 355 65 379 7.62e-41 147
MS.gene039309.t1 AT2G19590 33.935 277 163 7 50 319 9 272 1.49e-40 145
MS.gene039309.t1 AT4G21200 33.088 272 158 8 50 312 40 296 1.33e-39 143
MS.gene039309.t1 AT5G63600 30.294 340 210 9 18 351 3 321 2.50e-39 142
MS.gene039309.t1 AT1G03410 28.283 297 201 6 50 339 55 346 4.61e-39 142
MS.gene039309.t1 AT3G19010 31.086 267 161 7 31 279 6 267 6.63e-39 140
MS.gene039309.t1 AT1G03410 28.283 297 201 6 50 339 92 383 1.05e-38 142
MS.gene039309.t1 AT5G63600 30.205 341 210 10 18 351 3 322 2.66e-38 139
MS.gene039309.t1 AT3G61400 30.496 282 177 10 72 343 86 358 3.23e-38 140
MS.gene039309.t1 AT1G30040 28.793 323 210 11 35 344 6 321 7.55e-38 139
MS.gene039309.t1 AT4G25420 30.620 258 168 5 27 276 38 292 1.04e-37 137
MS.gene039309.t1 AT5G43935 32.993 294 159 10 51 335 18 282 1.63e-37 137
MS.gene039309.t1 AT4G21690 29.373 303 188 9 48 336 43 333 5.15e-37 137
MS.gene039309.t1 AT3G49620 33.446 296 173 8 52 326 34 326 6.38e-37 137
MS.gene039309.t1 AT5G07480 34.123 211 129 4 154 356 38 246 1.10e-36 133
MS.gene039309.t1 AT3G19000 30.612 245 145 7 51 276 31 269 1.11e-36 134
MS.gene039309.t1 AT1G03400 28.618 304 191 8 49 343 53 339 6.11e-36 134
MS.gene039309.t1 AT3G51240 33.796 216 140 2 103 316 6 220 2.41e-35 130
MS.gene039309.t1 AT1G50960 32.692 260 164 7 48 303 36 288 1.13e-34 130
MS.gene039309.t1 AT2G34555 31.023 303 186 12 52 344 27 316 1.46e-34 130
MS.gene039309.t1 AT1G80330 28.814 295 193 6 52 337 49 335 2.55e-34 129
MS.gene039309.t1 AT3G49630 30.225 311 189 9 52 336 9 317 3.30e-34 129
MS.gene039309.t1 AT3G50210 30.345 290 177 7 52 316 8 297 3.66e-34 129
MS.gene039309.t1 AT3G50210 30.345 290 177 7 52 316 8 297 3.66e-34 129
MS.gene039309.t1 AT3G50210 30.345 290 177 7 52 316 8 297 3.66e-34 129
MS.gene039309.t1 AT1G47990 29.338 317 191 10 46 345 9 309 8.57e-34 127
MS.gene039309.t1 AT2G25450 27.193 342 232 11 23 355 26 359 9.91e-34 128
MS.gene039309.t1 AT3G49630 30.272 294 185 8 61 336 22 313 1.53e-33 127
MS.gene039309.t1 AT2G19590 32.787 244 145 6 83 319 26 257 2.71e-32 123
MS.gene039309.t1 AT1G06650 29.134 254 159 6 35 281 52 291 5.48e-32 122
MS.gene039309.t1 AT5G59540 30.651 261 168 6 23 276 30 284 6.06e-32 122
MS.gene039309.t1 AT1G02400 27.794 349 207 13 12 345 1 319 1.24e-31 122
MS.gene039309.t1 AT5G51810 30.075 266 161 8 27 279 40 293 1.60e-31 120
MS.gene039309.t1 AT5G63595 30.038 263 153 6 41 299 14 249 2.46e-31 120
MS.gene039309.t1 AT1G06620 30.303 231 152 5 48 275 58 282 6.79e-31 119
MS.gene039309.t1 AT5G43440 26.357 258 181 4 23 275 29 282 2.94e-30 117
MS.gene039309.t1 AT1G03400 26.205 332 191 9 49 343 53 367 4.01e-30 119
MS.gene039309.t1 AT1G06640 29.200 250 152 8 35 275 52 285 1.05e-28 114
MS.gene039309.t1 AT1G06640 28.685 251 154 8 35 276 52 286 1.71e-28 112
MS.gene039309.t1 AT2G30840 28.137 263 170 8 23 275 26 279 2.80e-28 112
MS.gene039309.t1 AT3G46500 28.754 313 197 10 45 336 2 309 4.26e-28 112
MS.gene039309.t1 AT4G23340 28.707 317 197 11 44 347 2 302 5.45e-28 112
MS.gene039309.t1 AT5G43450 29.870 231 149 5 49 275 58 279 1.13e-27 110
MS.gene039309.t1 AT1G04380 29.921 254 163 8 27 276 21 263 5.64e-27 108
MS.gene039309.t1 AT1G30040 29.412 255 160 11 35 276 6 253 2.79e-25 103
MS.gene039309.t1 AT1G35190 28.972 321 196 12 45 340 2 315 2.07e-24 102
MS.gene039309.t1 AT3G61400 30.332 211 133 7 72 276 86 288 3.22e-24 101
MS.gene039309.t1 AT1G35190 28.205 312 187 11 45 340 2 292 9.51e-24 100
MS.gene039309.t1 AT5G63580 30.667 225 145 7 52 272 19 236 2.11e-23 97.8
MS.gene039309.t1 AT5G63580 30.667 225 145 7 52 272 19 236 3.40e-23 97.4
MS.gene039309.t1 AT3G47190 26.102 295 184 10 28 303 6 285 4.29e-23 98.6
MS.gene039309.t1 AT3G46500 28.417 278 173 10 45 301 2 274 5.12e-22 95.1
MS.gene039309.t1 AT3G46490 28.086 324 200 12 45 340 2 320 4.05e-21 93.2
MS.gene039309.t1 AT1G02400 27.719 285 162 12 12 282 1 255 4.65e-21 91.7
MS.gene039309.t1 AT4G16765 33.796 216 126 8 139 340 28 240 5.35e-21 91.3
MS.gene039309.t1 AT4G16765 33.796 216 126 8 139 340 28 240 5.35e-21 91.3
MS.gene039309.t1 AT4G16765 33.796 216 126 8 139 340 28 240 5.35e-21 91.3
MS.gene039309.t1 AT3G50210 32.934 167 106 3 156 316 49 215 2.74e-20 89.4
MS.gene039309.t1 AT5G58660 24.828 290 183 8 49 312 31 311 3.38e-20 90.9
MS.gene039309.t1 AT3G49630 32.432 185 116 5 159 336 62 244 5.95e-20 88.6
MS.gene039309.t1 AT4G16765 33.990 203 117 8 139 327 28 227 4.53e-19 85.5
MS.gene039309.t1 AT4G16765 42.500 120 62 3 226 340 77 194 6.05e-18 81.6
MS.gene039309.t1 AT3G46490 28.521 284 172 10 45 301 2 281 8.37e-18 83.6
MS.gene039309.t1 AT3G46500 30.688 189 121 5 160 340 53 239 3.85e-17 80.5
MS.gene039309.t1 AT3G46500 30.688 189 121 5 160 340 53 239 3.85e-17 80.5
MS.gene039309.t1 AT3G46500 31.285 179 113 5 170 340 1 177 6.82e-17 78.6
MS.gene039309.t1 AT1G52820 26.578 301 203 10 50 341 10 301 8.98e-17 80.5
MS.gene039309.t1 AT4G23340 33.571 140 87 4 212 347 47 184 1.41e-16 77.8
MS.gene039309.t1 AT4G03070 25.163 306 202 9 49 339 11 304 2.41e-16 79.3
MS.gene039309.t1 AT5G58660 24.710 259 159 8 49 282 31 278 5.80e-16 77.8
MS.gene039309.t1 AT4G22870 44.048 84 46 1 245 327 2 85 6.45e-16 73.6
MS.gene039309.t1 AT3G46480 27.668 253 151 10 103 340 38 273 2.80e-14 72.8
MS.gene039309.t1 AT2G06960 33.103 145 82 4 197 341 15 144 3.27e-14 69.7
MS.gene039309.t1 AT4G16770 27.542 236 148 9 32 253 2 228 3.90e-14 72.0
MS.gene039309.t1 AT4G22870 43.421 76 42 1 253 327 51 126 3.30e-13 67.0
MS.gene039309.t1 AT1G52800 23.922 255 185 6 76 328 38 285 4.90e-12 66.6
MS.gene039309.t1 AT3G46500 31.333 150 93 5 160 301 53 200 1.51e-11 63.9
MS.gene039309.t1 AT3G46500 32.624 141 85 5 169 301 31 169 2.01e-11 62.8
MS.gene039309.t1 AT3G46500 32.624 141 85 5 169 301 31 169 2.01e-11 62.8

Find 82 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAACTTCCTCATCCTTTA+AGG 0.061113 2.2:+19783943 MS.gene039309:CDS
CAAAGATTGGGGATTCTTTC+AGG 0.100898 2.2:+19783381 MS.gene039309:CDS
ACATACCATCTTTCCTTATT+TGG 0.120577 2.2:-19784925 None:intergenic
GAGGAAGTTGTGGAAATAAA+TGG 0.243579 2.2:-19783932 None:intergenic
CCTCAACCAGAAAAGGTTAT+TGG 0.246058 2.2:+19784836 MS.gene039309:CDS
AACTTGCTTTCAGAAGAATT+TGG 0.252169 2.2:+19783325 MS.gene039309:CDS
CTTCTACTTCATTGAGTTGT+AGG 0.279913 2.2:-19784898 None:intergenic
TCATGGTGTTAGTTCTTCTT+TGG 0.299804 2.2:+19783725 MS.gene039309:CDS
TTCACAATGCTTGCAAAGAT+TGG 0.316076 2.2:+19783368 MS.gene039309:CDS
AAGTAGAAGGTCTCCAAATA+AGG 0.318034 2.2:+19784912 MS.gene039309:CDS
CCCATCAGGAACTTCTCTTT+TGG 0.321052 2.2:+19783168 MS.gene039309:CDS
GCATTAGTCAGGGGCTTAAC+AGG 0.321976 2.2:-19784953 None:intergenic
ATGCCTTCATTGTTAACATT+GGG 0.330445 2.2:+19784972 MS.gene039309:CDS
AGCAATAGTGGACTCTAAAA+AGG 0.339422 2.2:+19786105 MS.gene039309:CDS
ACTTGCTTTCAGAAGAATTT+GGG 0.349402 2.2:+19783326 MS.gene039309:CDS
TTCTTTGCTTGTAAACTTGA+AGG 0.357327 2.2:+19786256 MS.gene039309:CDS
TCACAATGCTTGCAAAGATT+GGG 0.379161 2.2:+19783369 MS.gene039309:CDS
CCCCAACATATGGAGGGATT+TGG 0.383340 2.2:+19783822 MS.gene039309:CDS
TGTCAGAAAAGAATAAGTTT+TGG 0.384366 2.2:+19783793 MS.gene039309:CDS
TCCAAATCCCTCCATATGTT+GGG 0.384809 2.2:-19783823 None:intergenic
AGAATTTGGGAGTTCTGAAT+TGG 0.392969 2.2:+19783339 MS.gene039309:CDS
AGGAAGTTGTGGAAATAAAT+GGG 0.404992 2.2:-19783931 None:intergenic
TGGGGCATCCTAGAGTGTTT+AGG 0.414594 2.2:-19783912 None:intergenic
TTGGCAAACTCCCCAACATA+TGG 0.416272 2.2:+19783812 MS.gene039309:CDS
ATAAGAGAGTTATTTGAAGA+TGG 0.424523 2.2:+19784776 MS.gene039309:CDS
AAGTTATGCATGTCAATAAC+TGG 0.424581 2.2:-19783307 None:intergenic
GTGAGGAACAGAAACTTGAT+TGG 0.428945 2.2:+19783862 MS.gene039309:CDS
TGAACCAAGTCTTCATGATT+AGG 0.436095 2.2:-19783256 None:intergenic
TTGAATCAAGATGGTATTGT+AGG 0.441415 2.2:+19786157 MS.gene039309:CDS
TAACAATGAAGGCATTAGTC+AGG 0.448501 2.2:-19784964 None:intergenic
AATAAAGCCATGGTTATTGT+TGG 0.449566 2.2:+19784716 MS.gene039309:CDS
TAAGAGAGTTATTTGAAGAT+GGG 0.450575 2.2:+19784777 MS.gene039309:CDS
GTTCAAGAGTTAGCTAATGA+TGG 0.455600 2.2:+19783199 MS.gene039309:CDS
CTACAACTCAATGAAGTAGA+AGG 0.474819 2.2:+19784899 MS.gene039309:CDS
TATTGAACACCGAGCAATAG+TGG 0.477143 2.2:+19786093 MS.gene039309:CDS
AATGCCTTCATTGTTAACAT+TGG 0.477333 2.2:+19784971 MS.gene039309:CDS
CATCGAAAGATATTAACAAA+TGG 0.479527 2.2:+19786058 MS.gene039309:intron
TCCTTGTCCTCAACCAGAAA+AGG 0.479724 2.2:+19784829 MS.gene039309:CDS
TATTGGCCTCACAAATCATT+CGG 0.480574 2.2:+19784853 MS.gene039309:CDS
TCATTGATTAAGCTCTCTAA+AGG 0.481914 2.2:-19786181 None:intergenic
GTCCAAATCCCTCCATATGT+TGG 0.484164 2.2:-19783824 None:intergenic
TGATTAGGCTGAATGTATCT+TGG 0.486564 2.2:-19783241 None:intergenic
TGTCAATAACTGGAATTTCA+AGG 0.491071 2.2:-19783297 None:intergenic
TGCTTGTAAACTTGAAGGAA+AGG 0.493686 2.2:+19786261 MS.gene039309:CDS
CTTAAAGGATGAGGAAGTTG+TGG 0.498221 2.2:-19783942 None:intergenic
CACAATGCTTGCAAAGATTG+GGG 0.500886 2.2:+19783370 MS.gene039309:CDS
ATACTATAGCTGGTAAATCA+TGG 0.502881 2.2:+19783708 MS.gene039309:intron
TATTCTCATGTCATCGATGA+AGG 0.503705 2.2:-19786284 None:intergenic
AAATAAGGAAAGATGGTATG+TGG 0.506972 2.2:+19784927 MS.gene039309:CDS
GTCCCCAATGTTAACAATGA+AGG 0.518699 2.2:-19784975 None:intergenic
AAAAGTTACCTTAAAGGATG+AGG 0.521743 2.2:-19783951 None:intergenic
TGAGGAACAGAAACTTGATT+GGG 0.522736 2.2:+19783863 MS.gene039309:CDS
CTACTTCATTGAGTTGTAGG+AGG 0.525419 2.2:-19784895 None:intergenic
GGTCTCCAAATAAGGAAAGA+TGG 0.526545 2.2:+19784920 MS.gene039309:CDS
CAACCCTTCCTAAACACTCT+AGG 0.542118 2.2:+19783904 MS.gene039309:CDS
AACAATGAAGGCATTAGTCA+GGG 0.557863 2.2:-19784963 None:intergenic
TTAGCTAACTCTTGAACTGA+TGG 0.565292 2.2:-19783193 None:intergenic
TTCAAGAGTTAGCTAATGAT+GGG 0.568167 2.2:+19783200 MS.gene039309:CDS
TACCATCTTGATTCAAGCTG+TGG 0.568751 2.2:-19786150 None:intergenic
TCAGCCTAATCATGAAGACT+TGG 0.570938 2.2:+19783252 MS.gene039309:CDS
TTCCACAGCTTGAATCAAGA+TGG 0.578859 2.2:+19786148 MS.gene039309:CDS
GCAAACTCCCCAACATATGG+AGG 0.582747 2.2:+19783815 MS.gene039309:CDS
TGCCTTCATTGTTAACATTG+GGG 0.586385 2.2:+19784973 MS.gene039309:CDS
AATATGACCAACAATAACCA+TGG 0.589602 2.2:-19784723 None:intergenic
ACCAAAAGAGAAGTTCCTGA+TGG 0.589960 2.2:-19783169 None:intergenic
TTAGGCTGAATGTATCTTGG+TGG 0.602236 2.2:-19783238 None:intergenic
AATAAGGAAAGATGGTATGT+GGG 0.607299 2.2:+19784928 MS.gene039309:CDS
GCATCCTAGAGTGTTTAGGA+AGG 0.607381 2.2:-19783908 None:intergenic
TAACATTGGGGACGTGCTAG+AGG 0.608233 2.2:+19784985 MS.gene039309:CDS
CCAAATCCCTCCATATGTTG+GGG 0.608474 2.2:-19783822 None:intergenic
CATCCTAGAGTGTTTAGGAA+GGG 0.608806 2.2:-19783907 None:intergenic
CCAAAAGAGAAGTTCCTGAT+GGG 0.620472 2.2:-19783168 None:intergenic
ACAAATCATTCGGATCCTCA+AGG 0.625984 2.2:+19784863 MS.gene039309:CDS
CTGAATGTATCTTGGTGGAA+CGG 0.647791 2.2:-19783233 None:intergenic
ACAATGAAGGCATTAGTCAG+GGG 0.658951 2.2:-19784962 None:intergenic
GGAAGTTGTGGAAATAAATG+GGG 0.665119 2.2:-19783930 None:intergenic
CAAACTCCCCAACATATGGA+GGG 0.666990 2.2:+19783816 MS.gene039309:CDS
GAGGATCCGAATGATTTGTG+AGG 0.669506 2.2:-19784859 None:intergenic
TTTCTGGTTGAGGACAAGGA+GGG 0.674815 2.2:-19784826 None:intergenic
AGGAGGAGAGTAACACCTTG+AGG 0.676312 2.2:-19784878 None:intergenic
AAGATGGGATACAAATGATG+AGG 0.690592 2.2:+19784792 MS.gene039309:CDS
TCAATGAAGAAACACCACCT+CGG 0.710802 2.2:+19786197 MS.gene039309:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAAATTAAAAAAATC+TGG + chr2.2:19784282-19784301 MS.gene039309:intron 10.0%
!! TATAAAAACATTTATTTAAG+GGG - chr2.2:19784565-19784584 None:intergenic 10.0%
!!! AAATATATGACATATAATTT+TGG + chr2.2:19783437-19783456 MS.gene039309:intron 10.0%
!!! AAGTATAATTTTAGTTTAAA+TGG + chr2.2:19785193-19785212 MS.gene039309:intron 10.0%
!!! AATATATGACATATAATTTT+GGG + chr2.2:19783438-19783457 MS.gene039309:intron 10.0%
!!! TAGAAGTATTTTTTTTTTAT+AGG - chr2.2:19784093-19784112 None:intergenic 10.0%
!!! TTTATCTTCAATATTATTTT+GGG - chr2.2:19783579-19783598 None:intergenic 10.0%
!!! TTTTATCTTCAATATTATTT+TGG - chr2.2:19783580-19783599 None:intergenic 10.0%
!! AAACCTATTAAAATTAAGTA+AGG - chr2.2:19784063-19784082 None:intergenic 15.0%
!! AATTAAACAAATTTGAATTG+AGG + chr2.2:19784408-19784427 MS.gene039309:intron 15.0%
!! AGAACTATTAAAATTAAGTA+AGG + chr2.2:19784473-19784492 MS.gene039309:intron 15.0%
!! ATAAAAACATTTATTTAAGG+GGG - chr2.2:19784564-19784583 None:intergenic 15.0%
!! TAAATTGTTTGATATATGAA+TGG - chr2.2:19785019-19785038 None:intergenic 15.0%
!!! ATTAAATTAATGGATTGTAA+AGG + chr2.2:19785886-19785905 MS.gene039309:intron 15.0%
!!! GATATAATGGATTAAATTAA+TGG + chr2.2:19785876-19785895 MS.gene039309:intron 15.0%
!!! TCAAAAGATATATTTTCTAA+AGG - chr2.2:19785338-19785357 None:intergenic 15.0%
!!! TGCAATAAATAATTAGTTTT+GGG - chr2.2:19785445-19785464 None:intergenic 15.0%
!!! TTAAGGGTTAAATATATTTT+TGG + chr2.2:19784005-19784024 MS.gene039309:intron 15.0%
!!! TTCAAAAATTTAAGACTTTA+AGG - chr2.2:19784153-19784172 None:intergenic 15.0%
!!! TTGCAATAAATAATTAGTTT+TGG - chr2.2:19785446-19785465 None:intergenic 15.0%
!! AGTAAAAAAAGTTACCTTAA+AGG - chr2.2:19783960-19783979 None:intergenic 20.0%
!! TATTCTTAATATACTATAGC+TGG + chr2.2:19783698-19783717 MS.gene039309:intron 20.0%
!!! AATTTTAGTTTAAATGGTCA+TGG + chr2.2:19785199-19785218 MS.gene039309:intron 20.0%
!!! AGTCCTTACTTAATTTTAAT+AGG + chr2.2:19784057-19784076 MS.gene039309:intron 20.0%
!!! TAAAAGATCCCAATTTTATA+GGG + chr2.2:19784504-19784523 MS.gene039309:intron 20.0%
!!! TAAATAATTAGTTTTGGGTA+AGG - chr2.2:19785440-19785459 None:intergenic 20.0%
!!! TGAAAAAGCATTAAAGATAA+AGG + chr2.2:19784745-19784764 MS.gene039309:CDS 20.0%
!!! TTAAAAGATCCCAATTTTAT+AGG + chr2.2:19784503-19784522 MS.gene039309:intron 20.0%
! AAACAAATTTGAATTGAGGA+GGG + chr2.2:19784412-19784431 MS.gene039309:intron 25.0%
! AGAAATGAAAAATAAAGCCA+TGG + chr2.2:19784706-19784725 MS.gene039309:CDS 25.0%
! ATAAGAGAGTTATTTGAAGA+TGG + chr2.2:19784776-19784795 MS.gene039309:CDS 25.0%
! ATATCAAACCAACAATTAAG+TGG - chr2.2:19785854-19785873 None:intergenic 25.0%
! CATCGAAAGATATTAACAAA+TGG + chr2.2:19786058-19786077 MS.gene039309:intron 25.0%
! TAAACAAATTTGAATTGAGG+AGG + chr2.2:19784411-19784430 MS.gene039309:intron 25.0%
! TAAGAGAGTTATTTGAAGAT+GGG + chr2.2:19784777-19784796 MS.gene039309:CDS 25.0%
! TGAGTGCAGAAAATAAATTT+AGG + chr2.2:19784443-19784462 MS.gene039309:intron 25.0%
!! AAACAAACTTTGTTGTAACA+GGG - chr2.2:19784124-19784143 None:intergenic 25.0%
!! AACTTATTCTTTTCTGACAT+TGG - chr2.2:19783792-19783811 None:intergenic 25.0%
!! ATTTATTGCAAAGTGTTTCA+TGG + chr2.2:19785455-19785474 MS.gene039309:intron 25.0%
!! TAAACAAACTTTGTTGTAAC+AGG - chr2.2:19784125-19784144 None:intergenic 25.0%
!! TAGAAGTTCCCAATTTTATA+GGG - chr2.2:19784032-19784051 None:intergenic 25.0%
!! TGATTATCTAGAGTTTAGTT+AGG + chr2.2:19785355-19785374 MS.gene039309:intron 25.0%
!! TGTCAGAAAAGAATAAGTTT+TGG + chr2.2:19783793-19783812 MS.gene039309:CDS 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG - chr2.2:19784033-19784052 None:intergenic 25.0%
!!! ATTTTTGGTCCCTATAAAAT+TGG + chr2.2:19784020-19784039 MS.gene039309:intron 25.0%
!!! CTTAATTGTTGGTTTGATAT+CGG + chr2.2:19785854-19785873 MS.gene039309:intron 25.0%
!!! GAAGTGTTGAATTAGTATAT+GGG + chr2.2:19785785-19785804 MS.gene039309:intron 25.0%
!!! GATATATTTTCTAAAGGAAC+TGG - chr2.2:19785332-19785351 None:intergenic 25.0%
!!! TGAAGTGTTGAATTAGTATA+TGG + chr2.2:19785784-19785803 MS.gene039309:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG + chr2.2:19784021-19784040 MS.gene039309:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr2.2:19784040-19784021 None:intergenic 25.0%
AAAAGTTACCTTAAAGGATG+AGG - chr2.2:19783954-19783973 None:intergenic 30.0%
AAAGATTTAGACCCATGATT+TGG + chr2.2:19785513-19785532 MS.gene039309:intron 30.0%
AAATAAGGAAAGATGGTATG+TGG + chr2.2:19784927-19784946 MS.gene039309:CDS 30.0%
AAGTTATGCATGTCAATAAC+TGG - chr2.2:19783310-19783329 None:intergenic 30.0%
AATAAAGCCATGGTTATTGT+TGG + chr2.2:19784716-19784735 MS.gene039309:CDS 30.0%
AATAAGGAAAGATGGTATGT+GGG + chr2.2:19784928-19784947 MS.gene039309:CDS 30.0%
AATATGACCAACAATAACCA+TGG - chr2.2:19784726-19784745 None:intergenic 30.0%
AATCATGGGTCTAAATCTTT+AGG - chr2.2:19785513-19785532 None:intergenic 30.0%
AATGCCTTCATTGTTAACAT+TGG + chr2.2:19784971-19784990 MS.gene039309:CDS 30.0%
ACATACCATCTTTCCTTATT+TGG - chr2.2:19784928-19784947 None:intergenic 30.0%
ACTTACATCACACTTACTAT+TGG + chr2.2:19786016-19786035 MS.gene039309:intron 30.0%
ACTTGCTTTCAGAAGAATTT+GGG + chr2.2:19783326-19783345 MS.gene039309:CDS 30.0%
AGGAAGTTGTGGAAATAAAT+GGG - chr2.2:19783934-19783953 None:intergenic 30.0%
ATAAGCTATTAGCCATCATT+CGG - chr2.2:19785915-19785934 None:intergenic 30.0%
ATACTATAGCTGGTAAATCA+TGG + chr2.2:19783708-19783727 MS.gene039309:intron 30.0%
ATGCCTTCATTGTTAACATT+GGG + chr2.2:19784972-19784991 MS.gene039309:CDS 30.0%
ATTACTTGCATGTTTGGATT+GGG - chr2.2:19785249-19785268 None:intergenic 30.0%
CACTTTATTACTTGCATGTT+TGG - chr2.2:19785255-19785274 None:intergenic 30.0%
CGGTAAGTTTGACAAAATTA+CGG + chr2.2:19785151-19785170 MS.gene039309:intron 30.0%
GAATTAGTATATGGGAATCA+TGG + chr2.2:19785793-19785812 MS.gene039309:intron 30.0%
GTGAATGAAAAAGAGAGATA+AGG + chr2.2:19785755-19785774 MS.gene039309:intron 30.0%
TATTACTTGCATGTTTGGAT+TGG - chr2.2:19785250-19785269 None:intergenic 30.0%
TGGTTTGATATCGGATATAA+TGG + chr2.2:19785863-19785882 MS.gene039309:intron 30.0%
TGTCAATAACTGGAATTTCA+AGG - chr2.2:19783300-19783319 None:intergenic 30.0%
TTCAAGAGTTAGCTAATGAT+GGG + chr2.2:19783200-19783219 MS.gene039309:CDS 30.0%
TTCTTTGCTTGTAAACTTGA+AGG + chr2.2:19786256-19786275 MS.gene039309:CDS 30.0%
TTGAATCAAGATGGTATTGT+AGG + chr2.2:19786157-19786176 MS.gene039309:CDS 30.0%
! AACTTGCTTTCAGAAGAATT+TGG + chr2.2:19783325-19783344 MS.gene039309:CDS 30.0%
! CAAGTTTAGAACACTATGAA+AGG + chr2.2:19784186-19784205 MS.gene039309:intron 30.0%
! TATTCTTTTCTGACATTGGA+AGG - chr2.2:19783788-19783807 None:intergenic 30.0%
! TCATTGATTAAGCTCTCTAA+AGG - chr2.2:19786184-19786203 None:intergenic 30.0%
! TTTTTGTGAATGTGACCAAA+TGG + chr2.2:19785618-19785637 MS.gene039309:intron 30.0%
!! TCTAGGGCTAAATATGTTTT+TGG - chr2.2:19784531-19784550 None:intergenic 30.0%
!!! ACAAGCATTTGTTTTTAGTG+AGG + chr2.2:19783845-19783864 MS.gene039309:CDS 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr2.2:19784516-19784535 None:intergenic 30.0%
AAGATGGGATACAAATGATG+AGG + chr2.2:19784792-19784811 MS.gene039309:CDS 35.0%
AAGTAGAAGGTCTCCAAATA+AGG + chr2.2:19784912-19784931 MS.gene039309:CDS 35.0%
CGACATAAATGAAATCACGA+TGG - chr2.2:19785226-19785245 None:intergenic 35.0%
CTACAACTCAATGAAGTAGA+AGG + chr2.2:19784899-19784918 MS.gene039309:CDS 35.0%
GAAAAAATCAAGAACCCATC+AGG + chr2.2:19783154-19783173 MS.gene039309:CDS 35.0%
GAAAATTCTTGAATGGTCAC+GGG - chr2.2:19785656-19785675 None:intergenic 35.0%
GAGGAAGTTGTGGAAATAAA+TGG - chr2.2:19783935-19783954 None:intergenic 35.0%
GAGTCAAACCACTTAATTGT+TGG + chr2.2:19785843-19785862 MS.gene039309:intron 35.0%
GGAAAATTCTTGAATGGTCA+CGG - chr2.2:19785657-19785676 None:intergenic 35.0%
GGAAGTTGTGGAAATAAATG+GGG - chr2.2:19783933-19783952 None:intergenic 35.0%
GTTCAAGAGTTAGCTAATGA+TGG + chr2.2:19783199-19783218 MS.gene039309:CDS 35.0%
TAAAGATAAGGTGAGGATAG+AGG + chr2.2:19785109-19785128 MS.gene039309:intron 35.0%
TATTCTCATGTCATCGATGA+AGG - chr2.2:19786287-19786306 None:intergenic 35.0%
TCACAATGCTTGCAAAGATT+GGG + chr2.2:19783369-19783388 MS.gene039309:CDS 35.0%
TGAACCAAGTCTTCATGATT+AGG - chr2.2:19783259-19783278 None:intergenic 35.0%
TGAGGAACAGAAACTTGATT+GGG + chr2.2:19783863-19783882 MS.gene039309:CDS 35.0%
TGATTAGGCTGAATGTATCT+TGG - chr2.2:19783244-19783263 None:intergenic 35.0%
TGCCTTCATTGTTAACATTG+GGG + chr2.2:19784973-19784992 MS.gene039309:CDS 35.0%
TGCTTGTAAACTTGAAGGAA+AGG + chr2.2:19786261-19786280 MS.gene039309:CDS 35.0%
TGGATGGGAAAATTCTTGAA+TGG - chr2.2:19785663-19785682 None:intergenic 35.0%
TTAGCTAACTCTTGAACTGA+TGG - chr2.2:19783196-19783215 None:intergenic 35.0%
TTCACAATGCTTGCAAAGAT+TGG + chr2.2:19783368-19783387 MS.gene039309:CDS 35.0%
TTTCTCACTCAATGTGTCAA+TGG - chr2.2:19785692-19785711 None:intergenic 35.0%
! CTTCTACTTCATTGAGTTGT+AGG - chr2.2:19784901-19784920 None:intergenic 35.0%
! TATTGGCCTCACAAATCATT+CGG + chr2.2:19784853-19784872 MS.gene039309:CDS 35.0%
! TCATGGTGTTAGTTCTTCTT+TGG + chr2.2:19783725-19783744 MS.gene039309:CDS 35.0%
! TTCAACGCTGACTAAAGATA+AGG + chr2.2:19785097-19785116 MS.gene039309:intron 35.0%
!! AACAATGAAGGCATTAGTCA+GGG - chr2.2:19784966-19784985 None:intergenic 35.0%
!! AGAATTTGGGAGTTCTGAAT+TGG + chr2.2:19783339-19783358 MS.gene039309:CDS 35.0%
!! AGCAATAGTGGACTCTAAAA+AGG + chr2.2:19786105-19786124 MS.gene039309:CDS 35.0%
!! TAACAATGAAGGCATTAGTC+AGG - chr2.2:19784967-19784986 None:intergenic 35.0%
!! TAGTGGACTCTAAAAAGGAA+AGG + chr2.2:19786110-19786129 MS.gene039309:CDS 35.0%
!!! TTTTAGAGTCCACTATTGCT+CGG - chr2.2:19786105-19786124 None:intergenic 35.0%
ACAAATCATTCGGATCCTCA+AGG + chr2.2:19784863-19784882 MS.gene039309:CDS 40.0%
ACCAAAAGAGAAGTTCCTGA+TGG - chr2.2:19783172-19783191 None:intergenic 40.0%
ATGAGTGTGTGACCAAATCA+TGG - chr2.2:19785528-19785547 None:intergenic 40.0%
CAAAGATTGGGGATTCTTTC+AGG + chr2.2:19783381-19783400 MS.gene039309:CDS 40.0%
CACAACTTCCTCATCCTTTA+AGG + chr2.2:19783943-19783962 MS.gene039309:CDS 40.0%
CACAATGCTTGCAAAGATTG+GGG + chr2.2:19783370-19783389 MS.gene039309:CDS 40.0%
CCAAAAGAGAAGTTCCTGAT+GGG - chr2.2:19783171-19783190 None:intergenic 40.0%
CCTCAACCAGAAAAGGTTAT+TGG + chr2.2:19784836-19784855 MS.gene039309:CDS 40.0%
CTGAATGTATCTTGGTGGAA+CGG - chr2.2:19783236-19783255 None:intergenic 40.0%
CTTAAAGGATGAGGAAGTTG+TGG - chr2.2:19783945-19783964 None:intergenic 40.0%
GGTCTCCAAATAAGGAAAGA+TGG + chr2.2:19784920-19784939 MS.gene039309:CDS 40.0%
GTAGTGTAGGTTTGGATTGA+CGG + chr2.2:19785131-19785150 MS.gene039309:intron 40.0%
GTCCCCAATGTTAACAATGA+AGG - chr2.2:19784978-19784997 None:intergenic 40.0%
GTGACCAAATGGCAATTTGA+TGG + chr2.2:19785629-19785648 MS.gene039309:intron 40.0%
GTGAGGAACAGAAACTTGAT+TGG + chr2.2:19783862-19783881 MS.gene039309:CDS 40.0%
TACCATCTTGATTCAAGCTG+TGG - chr2.2:19786153-19786172 None:intergenic 40.0%
TATTGAACACCGAGCAATAG+TGG + chr2.2:19786093-19786112 MS.gene039309:CDS 40.0%
TCAATGAAGAAACACCACCT+CGG + chr2.2:19786197-19786216 MS.gene039309:CDS 40.0%
TCAGCCTAATCATGAAGACT+TGG + chr2.2:19783252-19783271 MS.gene039309:CDS 40.0%
TCCAAATCCCTCCATATGTT+GGG - chr2.2:19783826-19783845 None:intergenic 40.0%
TGAGTGTGTGACCAAATCAT+GGG - chr2.2:19785527-19785546 None:intergenic 40.0%
TTAGGCTGAATGTATCTTGG+TGG - chr2.2:19783241-19783260 None:intergenic 40.0%
TTCCACAGCTTGAATCAAGA+TGG + chr2.2:19786148-19786167 MS.gene039309:CDS 40.0%
TTGTAAAGGAGACCGAATGA+TGG + chr2.2:19785900-19785919 MS.gene039309:intron 40.0%
! CATCCTAGAGTGTTTAGGAA+GGG - chr2.2:19783910-19783929 None:intergenic 40.0%
! CTACTTCATTGAGTTGTAGG+AGG - chr2.2:19784898-19784917 None:intergenic 40.0%
!! ACAATGAAGGCATTAGTCAG+GGG - chr2.2:19784965-19784984 None:intergenic 40.0%
!!! ACTCCAACTTTTTTGAACCG+AGG - chr2.2:19786217-19786236 None:intergenic 40.0%
!!! CCAATAACCTTTTCTGGTTG+AGG - chr2.2:19784839-19784858 None:intergenic 40.0%
AAGGGGGACGAGTTAAATCT+AGG - chr2.2:19784548-19784567 None:intergenic 45.0%
AGGGGGACGAGTTAAATCTA+GGG - chr2.2:19784547-19784566 None:intergenic 45.0%
CAAACTCCCCAACATATGGA+GGG + chr2.2:19783816-19783835 MS.gene039309:CDS 45.0%
CAACCCTTCCTAAACACTCT+AGG + chr2.2:19783904-19783923 MS.gene039309:CDS 45.0%
CAATGTGTCAATGGTGTGTG+TGG - chr2.2:19785683-19785702 None:intergenic 45.0%
CCAAATCCCTCCATATGTTG+GGG - chr2.2:19783825-19783844 None:intergenic 45.0%
CCACCTCGGTTCAAAAAAGT+TGG + chr2.2:19786211-19786230 MS.gene039309:CDS 45.0%
GGATAGAGGTAGTGTAGGTT+TGG + chr2.2:19785123-19785142 MS.gene039309:intron 45.0%
GGGACCATCAAATTGCCATT+TGG - chr2.2:19785636-19785655 None:intergenic 45.0%
GTCCAAATCCCTCCATATGT+TGG - chr2.2:19783827-19783846 None:intergenic 45.0%
TCCTTGTCCTCAACCAGAAA+AGG + chr2.2:19784829-19784848 MS.gene039309:CDS 45.0%
TGTCAATGGTGTGTGTGGAT+GGG - chr2.2:19785678-19785697 None:intergenic 45.0%
TTGGCAAACTCCCCAACATA+TGG + chr2.2:19783812-19783831 MS.gene039309:CDS 45.0%
! CCCATCAGGAACTTCTCTTT+TGG + chr2.2:19783168-19783187 MS.gene039309:CDS 45.0%
! CGCTGACTAAAGATAAGGTG+AGG + chr2.2:19785102-19785121 MS.gene039309:intron 45.0%
! GAGGATCCGAATGATTTGTG+AGG - chr2.2:19784862-19784881 None:intergenic 45.0%
! GCATCCTAGAGTGTTTAGGA+AGG - chr2.2:19783911-19783930 None:intergenic 45.0%
! GTGAGGCCAATAACCTTTTC+TGG - chr2.2:19784845-19784864 None:intergenic 45.0%
!! TTTCTGGTTGAGGACAAGGA+GGG - chr2.2:19784829-19784848 None:intergenic 45.0%
!!! ACCTTTTCTGGTTGAGGACA+AGG - chr2.2:19784833-19784852 None:intergenic 45.0%
!!! CCAACTTTTTTGAACCGAGG+TGG - chr2.2:19786214-19786233 None:intergenic 45.0%
!!! TTTTCTGGTTGAGGACAAGG+AGG - chr2.2:19784830-19784849 None:intergenic 45.0%
!! AATATAAAAACATTTATTTA+AGG - chr2.2:19784567-19784586 None:intergenic 5.0%
!! ATATAAAAACATTTATTTAA+GGG - chr2.2:19784566-19784585 None:intergenic 5.0%
!! TTTAATAATTAAATAATGAA+TGG - chr2.2:19785581-19785600 None:intergenic 5.0%
!!! ATTTTTTATATTAGATTTAA+GGG + chr2.2:19783989-19784008 MS.gene039309:intron 5.0%
!!! TATTTTTTATATTAGATTTA+AGG + chr2.2:19783988-19784007 MS.gene039309:intron 5.0%
AGGAGGAGAGTAACACCTTG+AGG - chr2.2:19784881-19784900 None:intergenic 50.0%
CCACACAAGAATTGCTCGTG+TGG - chr2.2:19785489-19785508 None:intergenic 50.0%
CCACACGAGCAATTCTTGTG+TGG + chr2.2:19785486-19785505 MS.gene039309:intron 50.0%
CCCCAACATATGGAGGGATT+TGG + chr2.2:19783822-19783841 MS.gene039309:CDS 50.0%
GCAAACTCCCCAACATATGG+AGG + chr2.2:19783815-19783834 MS.gene039309:CDS 50.0%
GCATTAGTCAGGGGCTTAAC+AGG - chr2.2:19784956-19784975 None:intergenic 50.0%
GGTGAGGATAGAGGTAGTGT+AGG + chr2.2:19785118-19785137 MS.gene039309:intron 50.0%
GTGTCAATGGTGTGTGTGGA+TGG - chr2.2:19785679-19785698 None:intergenic 50.0%
TAACATTGGGGACGTGCTAG+AGG + chr2.2:19784985-19785004 MS.gene039309:CDS 50.0%
! TGGGGCATCCTAGAGTGTTT+AGG - chr2.2:19783915-19783934 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 19783151 19786321 19783151 ID=MS.gene039309
chr2.2 mRNA 19783151 19786321 19783151 ID=MS.gene039309.t1;Parent=MS.gene039309
chr2.2 exon 19783151 19783402 19783151 ID=MS.gene039309.t1.exon1;Parent=MS.gene039309.t1
chr2.2 CDS 19783151 19783402 19783151 ID=cds.MS.gene039309.t1;Parent=MS.gene039309.t1
chr2.2 exon 19783717 19783964 19783717 ID=MS.gene039309.t1.exon2;Parent=MS.gene039309.t1
chr2.2 CDS 19783717 19783964 19783717 ID=cds.MS.gene039309.t1;Parent=MS.gene039309.t1
chr2.2 exon 19784682 19785006 19784682 ID=MS.gene039309.t1.exon3;Parent=MS.gene039309.t1
chr2.2 CDS 19784682 19785006 19784682 ID=cds.MS.gene039309.t1;Parent=MS.gene039309.t1
chr2.2 exon 19786067 19786321 19786067 ID=MS.gene039309.t1.exon4;Parent=MS.gene039309.t1
chr2.2 CDS 19786067 19786321 19786067 ID=cds.MS.gene039309.t1;Parent=MS.gene039309.t1
Gene Sequence

>MS.gene039309

ATGGAAAAAATCAAGAACCCATCAGGAACTTCTCTTTTGGTACCATCAGTTCAAGAGTTAGCTAATGATGGGAAGATTTCAACCGTTCCACCAAGATACATTCAGCCTAATCATGAAGACTTGGTTCACTCTGAAGTTGATACTAACCTTGAAATTCCAGTTATTGACATGCATAACTTGCTTTCAGAAGAATTTGGGAGTTCTGAATTGGTTAAGCTTCACAATGCTTGCAAAGATTGGGGATTCTTTCAGGTCTTTTTTTCTCTTATTAAAGCTTCAATATATTAAATATATGACATATAATTTTGGGTTTCTTGATTGAATTTTTATAATTTATTTATATAAACAGTAAAAAAGTTGTTAACATTTTTAGCTCTGTGATTTGATATATAAATTGTCTTTTAAAACACACATGATATGTCAAACCCAAAATAATATTGAAGATAAAATTAGAGATTGAAAAAATTGAAATTGATATTCAATTGATAAATTTAATCTTTTTATGTCATAAATTCAACTGTTTAGTATTATTAATTTAATTTTTGTATATTCTTAATATACTATAGCTGGTAAATCATGGTGTTAGTTCTTCTTTGGTTGAGAAAATAAAGTTGAAGATACAAGATTTCTTCAACCTTCCAATGTCAGAAAAGAATAAGTTTTGGCAAACTCCCCAACATATGGAGGGATTTGGACAAGCATTTGTTTTTAGTGAGGAACAGAAACTTGATTGGGCTGATATGTTTTATATGACAACCCTTCCTAAACACTCTAGGATGCCCCATTTATTTCCACAACTTCCTCATCCTTTAAGGTAACTTTTTTTACTTATGTGTATATTTTTTATATTAGATTTAAGGGTTAAATATATTTTTGGTCCCTATAAAATTGGGAACTTCTAAGTTTAGTCCTTACTTAATTTTAATAGGTTTTTAAGTTCCTATAAAAAAAAAATACTTCTAATTTTAGTCCCTGTTACAACAAAGTTTGTTTAATTATCCTTAAAGTCTTAAATTTTTGAACGATTTTTTTAGACAAGTTTAGAACACTATGAAAGGTTCATTTAATAAAATTTAGAATTTTTTAACATGAAACGAATTAAATATGAATTTTTTAAAACGACAAAAGTTAAAGATAAAATTAAAAAAATCTGGACGTAAAAATCAAATTTTGCGACAATTTTTTGCAGAAGAGCTTTTAGTAATGTTCTTAATACGTATGCAAAAAAATGTTCAAAAACTCAAGAGTTTAAATATAAATTAAACAAATTTGAATTGAGGAGGGATTAATACTGAGTGCAGAAAATAAATTTAGGTACTAAAAGAACTATTAAAATTAAGTAAGGACTAAACTTAAAAGATCCCAATTTTATAGGGACCAAAAACATATTTAGCCCTAGATTTAACTCGTCCCCCTTAAATAAATGTTTTTATATTGTAATGTCACTTTTAATAAACTCGATTAATGTTTTATCTCTATTCAATATGCGACTTGAGCTTTTTGTCAACATTGATTGATCTTTATCATGCAGAGACACACTAGAGTTATACTCGCAAGAAATGAAAAATAAAGCCATGGTTATTGTTGGTCATATTGAAAAAGCATTAAAGATAAAGGAAAATGAAATAAGAGAGTTATTTGAAGATGGGATACAAATGATGAGGATGAACTATTACCCTCCTTGTCCTCAACCAGAAAAGGTTATTGGCCTCACAAATCATTCGGATCCTCAAGGTGTTACTCTCCTCCTACAACTCAATGAAGTAGAAGGTCTCCAAATAAGGAAAGATGGTATGTGGGTTCCTGTTAAGCCCCTGACTAATGCCTTCATTGTTAACATTGGGGACGTGCTAGAGGTAAAAAATCCATTCATATATCAAACAATTTATAGTGCTCAATGATTTAAATAGAGCTTGTTGAATAAATAAATAAATAAATAGCATTAATTCAACGCTGACTAAAGATAAGGTGAGGATAGAGGTAGTGTAGGTTTGGATTGACGGTAAGTTTGACAAAATTACGGTGATTTTGATGAAAATCTAAAGTATAATTTTAGTTTAAATGGTCATGGTCCATCGTGATTTCATTTATGTCGCCCAATCCAAACATGCAAGTAATAAAGTGCACAAATGATTAAAAAATCTCATTTGTGCAATTTTATGTTTGTCTTAGTATATTCCAGTTCCTTTAGAAAATATATCTTTTGATTATCTAGAGTTTAGTTAGGACATAAGTTTTATCTATTTTCATCAAGAGATCGAATTCAAGTGTTCTAGATGAATTCGACCTTACCCAAAACTAATTATTTATTGCAAAGTGTTTCATGGACACTCATCCACACGAGCAATTCTTGTGTGGACCTAAAGATTTAGACCCATGATTTGGTCACACACTCATAAAATTGCATATCATATAATTAATTAAAAACCATTCATTATTTAATTATTAAATTTTCTTACTTTTCTCTTTTTTGTGAATGTGACCAAATGGCAATTTGATGGTCCCGTGACCATTCAAGAATTTTCCCATCCACACACACCATTGACACATTGAGTGAGAAAGAAATAGAGTAGTGAAGATTGATAGATGTGACATGTTAATGATGTGAATGAAAAAGAGAGATAAGGAGAAAATGAAGTGTTGAATTAGTATATGGGAATCATGGATGTTTAACTATCATCGTTATTTATTTGAGTCAAACCACTTAATTGTTGGTTTGATATCGGATATAATGGATTAAATTAATGGATTGTAAAGGAGACCGAATGATGGCTAATAGCTTATAAACTCTGCATCAATTTACTTATAAACTTTTTATTTATATTTTAAAAATTTAGCACTAATATTGTTTTCTTTCTAAGATCTACTTACATCACACTTACTATTGGTTTTGTTTTTCATGCTTTACATCGAAAGATATTAACAAATGGAATATATCGAAGTATTGAACACCGAGCAATAGTGGACTCTAAAAAGGAAAGGCTTTCAATTGCTACATTCCACAGCTTGAATCAAGATGGTATTGTAGGTCCTTTAGAGAGCTTAATCAATGAAGAAACACCACCTCGGTTCAAAAAAGTTGGAGTAGATGAATACTTCAAGAACTTCTTTGCTTGTAAACTTGAAGGAAAGGCCTTCATCGATGACATGAGAATAGAGCATGATGATTGA
Protein sequence

>MS.gene039309.t1

MEKIKNPSGTSLLVPSVQELANDGKISTVPPRYIQPNHEDLVHSEVDTNLEIPVIDMHNLLSEEFGSSELVKLHNACKDWGFFQLVNHGVSSSLVEKIKLKIQDFFNLPMSEKNKFWQTPQHMEGFGQAFVFSEEQKLDWADMFYMTTLPKHSRMPHLFPQLPHPLRDTLELYSQEMKNKAMVIVGHIEKALKIKENEIRELFEDGIQMMRMNYYPPCPQPEKVIGLTNHSDPQGVTLLLQLNEVEGLQIRKDGMWVPVKPLTNAFIVNIGDVLEILTNGIYRSIEHRAIVDSKKERLSIATFHSLNQDGIVGPLESLINEETPPRFKKVGVDEYFKNFFACKLEGKAFIDDMRIEHDD