AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89655

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89655.t1 MTR_8g075830 96.438 365 13 0 1 365 1 365 0.0 733
MS.gene89655.t1 MTR_8g075890 89.041 365 40 0 1 365 1 365 0.0 695
MS.gene89655.t1 MTR_3g058610 80.791 354 68 0 1 354 1 354 0.0 623
MS.gene89655.t1 MTR_5g022020 80.120 332 66 0 1 332 1 332 0.0 574
MS.gene89655.t1 MTR_3g092890 38.006 321 188 7 16 333 15 327 8.79e-67 214
MS.gene89655.t1 MTR_4g015790 35.942 345 196 9 3 325 10 351 1.36e-65 212
MS.gene89655.t1 MTR_8g024120 37.072 321 192 8 16 332 18 332 2.62e-65 211
MS.gene89655.t1 MTR_7g068650 34.835 333 199 8 3 323 11 337 1.51e-63 207
MS.gene89655.t1 MTR_5g082750 37.224 317 190 7 15 325 24 337 3.35e-63 206
MS.gene89655.t1 MTR_7g062550 35.417 336 207 7 3 333 21 351 6.26e-63 206
MS.gene89655.t1 MTR_3g070860 36.036 333 198 10 3 325 11 338 8.28e-63 205
MS.gene89655.t1 MTR_7g062600 36.390 349 205 9 3 339 12 355 8.33e-63 205
MS.gene89655.t1 MTR_7g062570 36.278 317 194 6 20 333 35 346 6.56e-62 202
MS.gene89655.t1 MTR_7g062580 33.929 336 212 7 3 333 16 346 2.08e-60 199
MS.gene89655.t1 MTR_3g063180 35.145 276 166 5 39 305 42 313 1.11e-59 196
MS.gene89655.t1 MTR_5g032870 36.054 294 182 4 15 304 14 305 6.72e-56 186
MS.gene89655.t1 MTR_5g032880 37.288 295 177 6 15 304 352 643 3.24e-55 192
MS.gene89655.t1 MTR_5g032880 36.610 295 173 5 15 305 14 298 1.44e-52 185
MS.gene89655.t1 MTR_5g059140 34.091 308 187 6 4 303 6 305 6.49e-55 184
MS.gene89655.t1 MTR_1g062110 36.957 276 156 7 38 303 65 332 4.12e-54 182
MS.gene89655.t1 MTR_7g081710 32.622 328 212 7 14 337 23 345 8.85e-54 181
MS.gene89655.t1 MTR_7g063730 33.438 317 203 7 20 333 44 355 3.82e-53 180
MS.gene89655.t1 MTR_4g087090 34.333 300 182 6 18 305 10 306 4.07e-52 177
MS.gene89655.t1 MTR_2g437380 33.446 296 187 5 14 304 26 316 8.51e-52 176
MS.gene89655.t1 MTR_5g059130 33.876 307 189 7 4 303 6 305 8.97e-52 175
MS.gene89655.t1 MTR_7g102820 35.548 301 164 9 25 303 47 339 1.18e-51 176
MS.gene89655.t1 MTR_4g117880 36.201 279 164 8 19 292 41 310 1.56e-50 173
MS.gene89655.t1 MTR_8g064200 32.746 284 183 5 24 304 36 314 2.00e-50 172
MS.gene89655.t1 MTR_8g064200 32.746 284 183 5 24 304 41 319 2.33e-50 172
MS.gene89655.t1 MTR_3g091350 32.492 317 187 9 39 347 59 356 3.40e-50 172
MS.gene89655.t1 MTR_1g034140 31.722 331 205 4 16 332 4 327 4.69e-50 171
MS.gene89655.t1 MTR_5g011250 32.571 350 203 9 19 349 17 352 5.10e-50 171
MS.gene89655.t1 MTR_3g026150 33.828 337 200 10 11 333 24 351 8.77e-50 171
MS.gene89655.t1 MTR_3g072820 33.225 307 188 7 4 303 7 303 1.66e-49 169
MS.gene89655.t1 MTR_8g008930 33.667 300 186 7 19 312 41 333 2.40e-49 170
MS.gene89655.t1 MTR_5g055900 30.351 313 211 4 38 348 46 353 3.37e-49 169
MS.gene89655.t1 MTR_7g045650 37.262 263 158 5 18 278 38 295 9.51e-49 167
MS.gene89655.t1 MTR_3g072810 34.328 335 203 7 4 330 3 328 1.13e-48 167
MS.gene89655.t1 MTR_6g015950 32.424 330 205 8 15 337 15 333 3.57e-48 166
MS.gene89655.t1 MTR_4g087120 29.254 335 216 9 16 332 4 335 5.66e-48 166
MS.gene89655.t1 MTR_1g070135 32.095 296 189 6 14 305 13 300 1.16e-47 165
MS.gene89655.t1 MTR_5g048470 32.342 269 175 4 38 304 52 315 1.62e-47 165
MS.gene89655.t1 MTR_5g085330 35.316 269 159 7 39 303 5 262 1.71e-47 164
MS.gene89655.t1 MTR_0009s0050 31.230 317 200 8 25 333 32 338 2.87e-47 164
MS.gene89655.t1 MTR_8g009080 35.766 274 160 6 39 305 94 358 3.13e-47 165
MS.gene89655.t1 MTR_1g070080 35.556 270 166 5 36 303 35 298 4.09e-47 163
MS.gene89655.t1 MTR_0009s0050 31.230 317 200 8 25 333 32 338 4.24e-47 164
MS.gene89655.t1 MTR_7g016090 31.269 323 207 8 13 330 13 325 6.36e-47 162
MS.gene89655.t1 MTR_7g016090 31.269 323 207 8 13 330 15 327 7.04e-47 162
MS.gene89655.t1 MTR_1g033810 32.288 319 202 9 20 331 27 338 7.09e-47 163
MS.gene89655.t1 MTR_0328s0030 31.210 314 209 4 38 349 44 352 9.48e-47 162
MS.gene89655.t1 MTR_8g009090 34.643 280 166 7 19 292 41 309 1.03e-46 163
MS.gene89655.t1 MTR_1g034120 30.032 313 189 6 16 305 4 309 1.05e-46 162
MS.gene89655.t1 MTR_5g055680 28.107 338 226 7 4 333 10 338 1.20e-46 162
MS.gene89655.t1 MTR_3g091360 32.867 286 173 8 39 315 52 327 1.28e-46 162
MS.gene89655.t1 MTR_0009s0480 34.231 260 163 5 38 295 45 298 1.81e-46 162
MS.gene89655.t1 MTR_5g065010 33.882 304 172 11 8 303 19 301 4.77e-46 160
MS.gene89655.t1 MTR_1g102070 35.099 302 184 6 10 303 32 329 5.58e-46 161
MS.gene89655.t1 MTR_2g072910 31.475 305 203 4 4 305 14 315 5.94e-46 160
MS.gene89655.t1 MTR_1g034060 29.712 313 190 6 16 305 4 309 8.47e-46 160
MS.gene89655.t1 MTR_1g070120 31.488 289 186 7 19 303 18 298 8.99e-46 160
MS.gene89655.t1 MTR_8g074050 30.743 296 194 6 39 326 52 344 1.38e-45 160
MS.gene89655.t1 MTR_3g117420 31.379 290 192 6 39 324 52 338 1.46e-45 159
MS.gene89655.t1 MTR_8g009110 34.815 270 153 9 33 292 54 310 1.70e-45 160
MS.gene89655.t1 MTR_2g072890 33.457 269 175 3 38 305 51 316 1.87e-45 159
MS.gene89655.t1 MTR_1g070185 32.601 273 167 5 38 305 68 328 1.98e-45 159
MS.gene89655.t1 MTR_5g048850 33.333 270 166 4 38 298 46 310 2.06e-45 159
MS.gene89655.t1 MTR_5g055690 30.818 318 202 7 38 347 46 353 2.49e-45 159
MS.gene89655.t1 MTR_2g069010 35.019 257 156 4 39 292 69 317 3.20e-45 159
MS.gene89655.t1 MTR_3g083370 34.317 271 163 7 37 303 2 261 3.85e-45 157
MS.gene89655.t1 MTR_6g464620 34.983 303 185 6 9 303 36 334 5.24e-45 159
MS.gene89655.t1 MTR_1g093140 31.923 260 169 4 39 296 73 326 6.17e-45 159
MS.gene89655.t1 MTR_2g069060 34.545 275 160 5 39 305 49 311 7.58e-45 157
MS.gene89655.t1 MTR_5g055820 30.435 299 200 5 38 333 46 339 1.21e-44 157
MS.gene89655.t1 MTR_5g048570 27.893 337 226 7 4 333 10 336 1.48e-44 157
MS.gene89655.t1 MTR_5g048550 29.794 339 219 8 4 333 10 338 1.72e-44 157
MS.gene89655.t1 MTR_1g070085 31.973 294 193 4 14 305 12 300 1.81e-44 156
MS.gene89655.t1 MTR_1g070085 31.973 294 193 4 14 305 12 300 1.81e-44 156
MS.gene89655.t1 MTR_1g062110 37.021 235 130 7 38 262 65 291 3.19e-44 155
MS.gene89655.t1 MTR_4g087140 30.844 308 192 9 16 305 4 308 4.36e-44 155
MS.gene89655.t1 MTR_4g087110 29.206 315 187 6 16 305 4 307 7.75e-44 155
MS.gene89655.t1 MTR_4g024660 30.693 303 196 4 39 333 67 363 9.95e-44 155
MS.gene89655.t1 MTR_1g048940 30.769 286 190 6 11 292 16 297 1.44e-43 154
MS.gene89655.t1 MTR_8g009160 32.103 271 174 5 33 300 54 317 2.33e-43 154
MS.gene89655.t1 MTR_5g048740 33.969 262 164 6 36 294 42 297 3.63e-43 153
MS.gene89655.t1 MTR_8g062600 32.117 274 173 5 39 305 67 334 4.26e-43 154
MS.gene89655.t1 MTR_3g045230 32.215 298 184 7 39 330 56 341 5.59e-43 153
MS.gene89655.t1 MTR_8g028435 31.769 277 178 6 19 292 41 309 7.05e-43 153
MS.gene89655.t1 MTR_4g087100 30.719 306 192 7 16 304 4 306 7.16e-43 152
MS.gene89655.t1 MTR_8g009170 32.740 281 171 8 19 292 41 310 8.01e-43 152
MS.gene89655.t1 MTR_3g088565 32.234 273 164 7 39 303 3 262 8.63e-43 151
MS.gene89655.t1 MTR_2g068840 33.942 274 168 6 38 304 54 321 1.28e-42 152
MS.gene89655.t1 MTR_2g068950 33.077 260 157 5 39 292 63 311 1.31e-42 152
MS.gene89655.t1 MTR_2g069090 34.375 256 160 5 39 292 68 317 2.64e-42 151
MS.gene89655.t1 MTR_7g029655 34.241 257 156 6 39 292 67 313 2.85e-42 151
MS.gene89655.t1 MTR_5g055800 31.295 278 174 6 20 295 37 299 3.16e-42 150
MS.gene89655.t1 MTR_2g025120 31.757 296 185 8 39 328 4 288 3.79e-42 149
MS.gene89655.t1 MTR_4g093840 33.210 271 167 7 39 303 62 324 5.65e-42 150
MS.gene89655.t1 MTR_1g093120 32.031 256 165 4 39 292 67 315 9.05e-42 150
MS.gene89655.t1 MTR_2g068960 32.692 260 158 5 39 292 63 311 1.00e-41 150
MS.gene89655.t1 MTR_2g069210 33.588 262 167 4 39 299 64 319 2.88e-41 149
MS.gene89655.t1 MTR_8g063070 29.781 319 211 5 33 348 61 369 2.91e-41 149
MS.gene89655.t1 MTR_1g093110 31.765 255 167 3 39 292 70 318 6.03e-41 148
MS.gene89655.t1 MTR_3g043900 31.987 297 185 6 39 330 56 340 7.22e-41 147
MS.gene89655.t1 MTR_2g069020 33.591 259 157 5 39 292 67 315 8.96e-41 147
MS.gene89655.t1 MTR_2g069060 36.957 230 126 4 39 261 27 244 1.03e-40 144
MS.gene89655.t1 MTR_7g016080 30.100 299 185 9 13 305 13 293 1.05e-40 146
MS.gene89655.t1 MTR_8g074070 31.227 269 180 4 38 304 51 316 1.13e-40 147
MS.gene89655.t1 MTR_0032s0040 34.615 260 153 7 39 292 70 318 1.33e-40 147
MS.gene89655.t1 MTR_2g069190 34.375 256 159 4 39 292 68 316 1.49e-40 147
MS.gene89655.t1 MTR_2g069020 33.591 259 157 5 39 292 67 315 2.12e-40 147
MS.gene89655.t1 MTR_4g116010 32.384 281 169 5 39 311 50 317 1.23e-39 144
MS.gene89655.t1 MTR_8g033380 32.781 302 192 5 11 305 28 325 1.90e-39 144
MS.gene89655.t1 MTR_7g056347 32.296 257 163 4 39 292 67 315 2.00e-39 144
MS.gene89655.t1 MTR_8g009080 37.004 227 130 4 39 261 94 311 2.18e-39 142
MS.gene89655.t1 MTR_7g102720 30.508 295 193 6 39 330 37 322 2.36e-39 142
MS.gene89655.t1 MTR_8g009080 37.004 227 130 4 39 261 94 311 3.11e-39 142
MS.gene89655.t1 MTR_2g102570 30.576 278 169 6 36 303 49 312 7.56e-39 142
MS.gene89655.t1 MTR_3g117485 32.129 249 162 5 60 304 71 316 1.02e-38 141
MS.gene89655.t1 MTR_3g117485 32.231 242 157 5 67 304 6 244 1.27e-38 139
MS.gene89655.t1 MTR_2g069300 32.593 270 162 5 33 294 48 305 4.04e-38 140
MS.gene89655.t1 MTR_1g032140 33.667 300 186 7 38 333 65 355 5.78e-38 140
MS.gene89655.t1 MTR_3g026150 33.865 251 160 5 86 333 1 248 6.57e-38 137
MS.gene89655.t1 MTR_0009s0480 34.071 226 141 5 38 261 45 264 9.81e-38 137
MS.gene89655.t1 MTR_1g032250 33.770 305 182 8 38 339 72 359 1.65e-37 139
MS.gene89655.t1 MTR_1g043760 34.109 258 156 3 39 292 54 301 2.69e-37 138
MS.gene89655.t1 MTR_3g096500 32.727 275 169 5 40 303 67 336 2.74e-37 138
MS.gene89655.t1 MTR_7g062560 29.245 318 207 8 19 333 41 343 5.32e-37 137
MS.gene89655.t1 MTR_2g437380 34.404 218 139 2 89 304 7 222 6.65e-37 134
MS.gene89655.t1 MTR_7g451860 30.693 303 186 8 38 333 40 325 8.01e-37 136
MS.gene89655.t1 MTR_7g047670 30.693 303 186 8 38 333 40 325 8.01e-37 136
MS.gene89655.t1 MTR_1g032220 32.667 300 189 7 38 333 72 362 1.29e-36 136
MS.gene89655.t1 MTR_8g041620 32.463 268 168 8 39 300 68 328 1.52e-36 136
MS.gene89655.t1 MTR_8g009170 33.200 250 149 8 19 261 41 279 1.89e-36 134
MS.gene89655.t1 MTR_3g026150 33.969 262 153 8 11 260 24 277 2.12e-36 134
MS.gene89655.t1 MTR_8g041600 31.418 261 162 6 39 292 68 318 2.23e-36 136
MS.gene89655.t1 MTR_1g070135 31.076 251 161 6 14 260 13 255 2.32e-36 134
MS.gene89655.t1 MTR_1g081840 34.219 301 153 11 38 311 52 334 5.99e-36 134
MS.gene89655.t1 MTR_0009s0050 32.883 222 141 4 114 333 25 240 7.25e-36 131
MS.gene89655.t1 MTR_5g048850 32.889 225 145 3 38 261 46 265 7.95e-36 132
MS.gene89655.t1 MTR_0009s0050 32.883 222 141 4 114 333 25 240 9.50e-36 131
MS.gene89655.t1 MTR_7g105070 31.034 261 171 5 36 294 56 309 3.63e-35 132
MS.gene89655.t1 MTR_1g043770 32.847 274 167 5 39 305 53 316 4.76e-35 132
MS.gene89655.t1 MTR_2g072910 30.651 261 175 4 4 261 14 271 5.16e-35 130
MS.gene89655.t1 MTR_1g043810 33.459 266 154 6 36 292 51 302 6.01e-35 131
MS.gene89655.t1 MTR_8g469400 29.373 303 187 8 39 333 67 350 1.31e-34 130
MS.gene89655.t1 MTR_8g074070 29.740 269 165 5 38 304 51 297 1.54e-34 130
MS.gene89655.t1 MTR_3g088745 32.877 292 169 7 38 311 35 317 4.15e-34 129
MS.gene89655.t1 MTR_6g092620 32.000 275 162 10 39 303 3 262 1.31e-33 127
MS.gene89655.t1 MTR_2g019370 30.769 299 187 10 44 328 25 317 1.57e-33 127
MS.gene89655.t1 MTR_1g070085 33.333 225 145 3 83 305 1 222 2.07e-33 125
MS.gene89655.t1 MTR_1g070100 35.211 213 125 4 95 305 17 218 2.35e-33 125
MS.gene89655.t1 MTR_1g043775 32.836 268 153 7 36 292 51 302 2.82e-33 127
MS.gene89655.t1 MTR_2g033270 29.180 305 185 8 49 337 23 312 3.37e-33 126
MS.gene89655.t1 MTR_5g055690 32.444 225 145 4 39 261 47 266 3.41e-33 125
MS.gene89655.t1 MTR_4g074130 28.526 312 191 9 38 341 39 326 6.56e-33 125
MS.gene89655.t1 MTR_5g005570 29.836 305 183 9 38 333 36 318 6.67e-33 125
MS.gene89655.t1 MTR_8g041600 32.609 230 138 6 39 261 68 287 3.15e-32 123
MS.gene89655.t1 MTR_0056s0160 32.022 178 118 2 127 303 17 192 3.19e-32 121
MS.gene89655.t1 MTR_1g011580 32.714 269 164 7 39 303 63 318 8.11e-32 123
MS.gene89655.t1 MTR_8g009150 28.897 263 158 5 33 292 54 290 8.56e-32 122
MS.gene89655.t1 MTR_2g083000 29.293 297 195 6 38 333 32 314 9.57e-32 122
MS.gene89655.t1 MTR_4g087130 29.739 306 196 8 16 305 4 306 9.88e-32 123
MS.gene89655.t1 MTR_2g068800 31.174 247 142 6 38 279 54 277 1.02e-31 121
MS.gene89655.t1 MTR_2g083030 29.866 298 193 6 9 301 7 293 1.35e-31 122
MS.gene89655.t1 MTR_3g040410 29.605 304 194 8 39 338 6 293 1.68e-31 121
MS.gene89655.t1 MTR_8g009120 31.835 267 153 8 33 292 54 298 1.92e-31 122
MS.gene89655.t1 MTR_2g070870 27.397 292 186 10 35 316 24 299 2.74e-31 121
MS.gene89655.t1 MTR_8g461330 26.791 321 201 10 35 337 23 327 6.12e-31 120
MS.gene89655.t1 MTR_3g083370 33.624 229 137 7 37 261 2 219 1.69e-30 116
MS.gene89655.t1 MTR_8g093980 28.859 298 194 8 38 324 58 348 2.57e-30 119
MS.gene89655.t1 MTR_8g006930 32.296 257 163 6 39 292 67 315 3.61e-30 119
MS.gene89655.t1 MTR_0009s0050 37.500 160 96 3 176 333 1 158 5.62e-30 113
MS.gene89655.t1 MTR_4g119410 30.189 265 170 4 39 298 67 321 5.92e-30 118
MS.gene89655.t1 MTR_2g025120 32.895 228 138 7 39 262 4 220 2.61e-29 113
MS.gene89655.t1 MTR_8g093930 30.496 282 162 8 39 301 47 313 3.04e-29 116
MS.gene89655.t1 MTR_7g056393 32.171 258 162 5 39 292 67 315 3.86e-29 116
MS.gene89655.t1 MTR_1g070110 32.444 225 113 6 83 303 4 193 1.60e-28 111
MS.gene89655.t1 MTR_1g086550 26.498 317 210 7 49 346 24 336 1.66e-28 114
MS.gene89655.t1 MTR_5g025090 25.817 306 207 7 39 340 5 294 2.33e-28 112
MS.gene89655.t1 MTR_1g043770 33.040 227 138 3 39 261 53 269 2.47e-28 112
MS.gene89655.t1 MTR_4g123020 27.124 306 204 8 44 338 19 316 5.86e-28 112
MS.gene89655.t1 MTR_7g078010 31.395 258 164 6 39 292 67 315 1.73e-27 111
MS.gene89655.t1 MTR_7g077670 28.313 332 205 8 38 355 10 322 2.79e-27 110
MS.gene89655.t1 MTR_8g030880 29.699 266 171 6 36 292 2 260 3.10e-27 110
MS.gene89655.t1 MTR_1g043810 32.766 235 135 6 36 261 51 271 4.91e-27 109
MS.gene89655.t1 MTR_4g115990 29.368 269 164 6 39 305 46 290 1.97e-26 107
MS.gene89655.t1 MTR_7g056353 29.630 243 163 3 58 300 63 297 2.48e-26 110
MS.gene89655.t1 MTR_5g025050 26.780 295 196 8 39 329 5 283 7.25e-26 105
MS.gene89655.t1 MTR_1g043775 32.068 237 134 7 36 261 51 271 2.44e-25 104
MS.gene89655.t1 MTR_4g132770 43.810 105 56 2 200 303 29 131 5.80e-24 97.1
MS.gene89655.t1 MTR_6g088665 29.123 285 173 12 42 301 18 298 1.17e-23 100
MS.gene89655.t1 MTR_8g102600 28.223 287 173 8 63 326 31 307 1.45e-23 100
MS.gene89655.t1 MTR_1g032240 45.045 111 49 3 187 296 48 147 2.21e-23 95.9
MS.gene89655.t1 MTR_5g027230 26.897 290 189 8 58 340 20 293 2.24e-23 99.0
MS.gene89655.t1 MTR_8g009180 38.281 128 77 1 165 292 114 239 2.54e-23 98.6
MS.gene89655.t1 MTR_4g100600 27.737 274 181 7 39 301 9 276 2.80e-23 99.0
MS.gene89655.t1 MTR_6g088665 28.667 300 183 11 24 301 7 297 3.04e-23 99.4
MS.gene89655.t1 MTR_7g078010 32.159 227 141 6 39 261 67 284 7.62e-23 97.4
MS.gene89655.t1 MTR_0009s0400 44.330 97 51 2 200 295 1 95 1.03e-22 93.2
MS.gene89655.t1 MTR_4g096840 25.267 281 186 8 46 311 28 299 4.42e-22 95.9
MS.gene89655.t1 MTR_5g025060 27.682 289 167 11 39 325 6 254 5.47e-22 94.7
MS.gene89655.t1 MTR_1g043840 38.346 133 80 1 160 292 54 184 2.55e-21 94.0
MS.gene89655.t1 MTR_3g464530 24.415 299 192 10 47 333 34 310 6.49e-21 92.4
MS.gene89655.t1 MTR_4g100590 25.641 273 183 7 39 301 9 271 6.82e-21 92.4
MS.gene89655.t1 MTR_1g027290 26.531 294 188 10 26 303 16 297 1.04e-20 92.0
MS.gene89655.t1 MTR_4g011720 26.259 278 192 6 59 331 31 300 1.11e-19 89.0
MS.gene89655.t1 MTR_5g024940 25.899 278 172 7 58 331 20 267 1.39e-19 88.2
MS.gene89655.t1 MTR_8g102600 28.090 267 159 8 83 326 1 257 6.58e-17 80.5
MS.gene89655.t1 MTR_3g108520 26.502 283 174 9 38 301 6 273 8.67e-16 77.8
MS.gene89655.t1 MTR_4g011690 26.616 263 172 8 59 307 31 286 1.04e-15 77.4
MS.gene89655.t1 MTR_4g100600 26.549 226 150 6 39 253 9 229 1.22e-14 72.8
MS.gene89655.t1 MTR_4g021360 23.567 314 224 10 38 341 6 313 2.47e-14 73.6
MS.gene89655.t1 MTR_4g011720 26.840 231 152 8 59 282 31 251 7.06e-13 68.6
MS.gene89655.t1 MTR_7g056370 27.632 152 95 4 39 184 46 188 7.27e-13 67.8
MS.gene89655.t1 MTR_4g021380 25.000 292 193 9 37 307 5 291 4.57e-12 66.6
MS.gene89655.t1 MTR_3g040440 43.662 71 38 1 212 282 14 82 1.23e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89655.t1 AT3G51240 76.986 365 77 2 1 365 1 358 0.0 609
MS.gene89655.t1 AT3G51240 78.929 280 53 1 86 365 1 274 5.19e-174 485
MS.gene89655.t1 AT5G24530 35.061 328 199 6 12 333 11 330 8.71e-65 209
MS.gene89655.t1 AT4G10490 37.975 316 182 10 18 326 20 328 1.25e-63 206
MS.gene89655.t1 AT4G16330 37.162 296 172 7 17 305 41 329 9.79e-62 202
MS.gene89655.t1 AT2G38240 36.145 332 196 9 3 325 8 332 1.62e-61 201
MS.gene89655.t1 AT3G11180 35.030 334 200 8 3 325 52 379 2.64e-61 202
MS.gene89655.t1 AT3G11180 35.030 334 200 8 3 325 52 379 3.84e-61 202
MS.gene89655.t1 AT4G10500 33.735 332 207 8 10 335 14 338 6.44e-61 199
MS.gene89655.t1 AT5G05600 35.045 331 204 8 3 325 23 350 3.41e-59 196
MS.gene89655.t1 AT3G19010 34.416 308 175 5 11 305 11 304 6.86e-55 184
MS.gene89655.t1 AT3G19010 34.416 308 175 5 11 305 11 304 6.86e-55 184
MS.gene89655.t1 AT3G55970 33.016 315 197 7 3 305 10 322 2.78e-53 180
MS.gene89655.t1 AT3G19000 32.792 308 187 4 16 305 4 309 4.03e-53 179
MS.gene89655.t1 AT3G21420 34.812 293 180 5 20 304 32 321 5.87e-53 179
MS.gene89655.t1 AT1G78550 32.765 293 192 5 15 305 28 317 2.19e-52 177
MS.gene89655.t1 AT4G16330 40.708 226 125 5 86 305 1 223 6.38e-52 173
MS.gene89655.t1 AT5G08640 34.069 317 196 7 20 330 23 332 6.69e-52 176
MS.gene89655.t1 AT5G08640 34.069 317 196 7 20 330 23 332 6.69e-52 176
MS.gene89655.t1 AT1G55290 32.867 286 172 8 39 316 62 335 1.68e-48 167
MS.gene89655.t1 AT3G19000 32.955 264 157 4 16 261 4 265 2.46e-48 165
MS.gene89655.t1 AT4G22880 32.075 318 195 8 38 347 46 350 1.05e-47 165
MS.gene89655.t1 AT4G22880 32.075 318 195 8 38 347 46 350 1.05e-47 165
MS.gene89655.t1 AT4G22880 32.075 318 195 8 38 347 46 350 1.05e-47 165
MS.gene89655.t1 AT1G17020 33.010 309 197 7 4 305 14 319 1.36e-47 165
MS.gene89655.t1 AT4G25300 29.674 337 227 8 4 333 13 346 6.11e-47 163
MS.gene89655.t1 AT5G59540 33.577 274 170 5 38 305 60 327 1.24e-46 163
MS.gene89655.t1 AT2G36690 34.601 263 157 8 38 294 60 313 1.95e-46 162
MS.gene89655.t1 AT2G36690 34.601 263 157 8 38 294 60 313 1.95e-46 162
MS.gene89655.t1 AT4G25310 30.267 337 222 8 4 333 13 343 2.06e-46 162
MS.gene89655.t1 AT1G60980 35.315 286 172 6 38 312 56 339 2.83e-46 162
MS.gene89655.t1 AT1G03400 36.585 246 148 4 47 290 56 295 2.93e-46 161
MS.gene89655.t1 AT5G05600 35.206 267 164 6 3 262 23 287 4.10e-46 159
MS.gene89655.t1 AT3G60290 32.534 292 166 8 18 294 29 304 7.12e-46 160
MS.gene89655.t1 AT3G19010 31.494 308 154 6 11 305 11 274 1.17e-45 159
MS.gene89655.t1 AT3G13610 31.935 310 188 10 14 313 36 332 1.63e-45 160
MS.gene89655.t1 AT3G19010 34.470 264 146 5 11 261 11 260 1.84e-45 158
MS.gene89655.t1 AT1G04380 35.424 271 162 6 39 305 45 306 1.98e-45 159
MS.gene89655.t1 AT1G17010 31.864 295 194 6 15 305 28 319 2.23e-45 159
MS.gene89655.t1 AT4G25420 32.558 301 192 4 10 303 34 330 1.42e-44 157
MS.gene89655.t1 AT1G15550 32.404 287 184 5 50 329 60 343 1.78e-44 157
MS.gene89655.t1 AT2G44800 31.295 278 184 6 20 294 31 304 5.93e-44 155
MS.gene89655.t1 AT1G78550 33.898 236 153 3 71 305 6 239 1.80e-43 152
MS.gene89655.t1 AT5G59530 33.455 275 170 6 38 305 57 325 1.82e-43 154
MS.gene89655.t1 AT5G43440 32.472 271 173 6 39 305 62 326 2.88e-43 154
MS.gene89655.t1 AT1G03410 35.448 268 156 8 39 297 57 316 4.79e-43 153
MS.gene89655.t1 AT5G51810 32.686 309 177 5 10 303 36 328 9.88e-43 153
MS.gene89655.t1 AT1G03410 35.448 268 156 8 39 297 94 353 1.49e-42 153
MS.gene89655.t1 AT1G06620 31.290 310 175 8 38 327 61 352 3.23e-42 151
MS.gene89655.t1 AT3G12900 34.100 261 164 5 47 304 61 316 3.71e-42 150
MS.gene89655.t1 AT5G07200 33.455 275 172 3 38 303 57 329 8.64e-42 150
MS.gene89655.t1 AT5G63600 32.740 281 168 8 38 312 32 297 9.49e-42 149
MS.gene89655.t1 AT3G55970 31.985 272 171 7 3 262 10 279 1.59e-41 147
MS.gene89655.t1 AT5G43450 33.333 273 166 8 39 305 61 323 2.29e-41 149
MS.gene89655.t1 AT5G63590 32.384 281 168 7 34 304 8 276 3.33e-41 147
MS.gene89655.t1 AT5G63600 32.624 282 168 9 38 312 32 298 1.35e-40 146
MS.gene89655.t1 AT1G77330 32.069 290 172 9 39 317 3 278 1.49e-40 145
MS.gene89655.t1 AT1G80330 31.056 322 184 9 10 309 13 318 2.13e-40 146
MS.gene89655.t1 AT1G05010 32.963 270 165 8 39 303 4 262 3.09e-40 145
MS.gene89655.t1 AT5G07480 30.640 297 184 9 11 294 16 303 3.13e-40 145
MS.gene89655.t1 AT4G21690 31.803 305 185 6 10 304 23 314 3.35e-40 145
MS.gene89655.t1 AT1G03400 37.500 216 128 3 47 261 56 265 5.31e-40 145
MS.gene89655.t1 AT5G20550 30.142 282 181 6 34 304 35 311 7.10e-40 144
MS.gene89655.t1 AT5G54000 33.203 256 165 5 51 304 60 311 1.34e-39 144
MS.gene89655.t1 AT5G59540 34.802 227 139 3 38 261 60 280 3.34e-39 141
MS.gene89655.t1 AT1G04350 31.707 287 177 9 26 305 47 321 4.49e-39 142
MS.gene89655.t1 AT1G06645 33.210 271 163 7 39 302 77 336 1.66e-38 141
MS.gene89655.t1 AT5G12270 31.373 306 197 5 4 304 21 318 2.29e-38 140
MS.gene89655.t1 AT1G62380 31.111 270 171 8 38 303 6 264 4.22e-38 139
MS.gene89655.t1 AT1G80340 31.987 297 189 7 50 336 53 346 4.32e-38 140
MS.gene89655.t1 AT1G49390 31.250 272 175 7 38 303 44 309 5.54e-38 139
MS.gene89655.t1 AT1G06650 32.046 259 163 6 39 292 64 314 7.58e-38 139
MS.gene89655.t1 AT5G20400 29.352 293 197 6 38 324 44 332 8.06e-38 139
MS.gene89655.t1 AT1G12010 30.000 270 174 7 38 303 6 264 5.58e-37 136
MS.gene89655.t1 AT1G04380 35.714 224 134 4 39 261 45 259 8.38e-37 134
MS.gene89655.t1 AT5G63595 31.599 269 153 8 36 301 22 262 9.36e-37 134
MS.gene89655.t1 AT2G30840 31.095 283 179 9 39 313 57 331 1.26e-36 136
MS.gene89655.t1 AT3G61400 32.975 279 165 9 25 292 49 316 2.22e-36 135
MS.gene89655.t1 AT1G06620 33.755 237 126 6 38 261 61 279 7.74e-36 132
MS.gene89655.t1 AT5G43440 33.036 224 143 4 39 261 62 279 9.78e-36 132
MS.gene89655.t1 AT1G06640 31.636 275 172 8 39 305 64 330 9.89e-36 134
MS.gene89655.t1 AT2G30830 29.934 304 197 9 38 333 53 348 4.81e-35 132
MS.gene89655.t1 AT5G54000 32.618 233 153 4 74 304 1 231 3.47e-34 127
MS.gene89655.t1 AT4G25420 30.502 259 169 4 10 261 34 288 3.84e-34 128
MS.gene89655.t1 AT2G19590 31.985 272 165 10 38 303 10 267 5.26e-34 128
MS.gene89655.t1 AT4G21200 31.086 267 170 6 38 301 41 296 6.52e-34 128
MS.gene89655.t1 AT1G44090 30.693 303 195 8 38 329 62 360 1.16e-33 129
MS.gene89655.t1 AT5G43450 34.071 226 136 6 39 261 61 276 1.18e-33 126
MS.gene89655.t1 AT2G30840 30.742 283 174 10 39 313 57 325 2.32e-33 127
MS.gene89655.t1 AT5G51810 30.502 259 165 4 10 261 36 286 6.36e-33 125
MS.gene89655.t1 AT1G06650 33.040 227 140 5 39 261 64 282 9.49e-33 124
MS.gene89655.t1 AT2G25450 30.403 273 178 6 39 305 55 321 2.14e-32 125
MS.gene89655.t1 AT1G30040 27.835 291 193 7 27 304 6 292 5.31e-32 123
MS.gene89655.t1 AT1G49390 30.769 234 154 5 74 303 1 230 5.81e-32 121
MS.gene89655.t1 AT5G43935 28.105 306 183 9 35 332 15 291 2.37e-31 120
MS.gene89655.t1 AT1G78440 25.836 329 216 10 39 350 10 327 3.38e-31 120
MS.gene89655.t1 AT1G06640 32.599 227 141 5 39 261 64 282 6.41e-31 119
MS.gene89655.t1 AT1G47990 28.707 317 192 10 38 337 14 313 6.92e-31 120
MS.gene89655.t1 AT3G61400 33.603 247 143 8 25 261 49 284 1.12e-30 119
MS.gene89655.t1 AT1G06640 32.599 227 141 5 39 261 64 282 1.14e-30 119
MS.gene89655.t1 AT4G25310 27.381 336 205 9 4 333 13 315 1.91e-30 119
MS.gene89655.t1 AT2G30840 32.018 228 142 6 39 261 57 276 8.70e-30 116
MS.gene89655.t1 AT5G63580 33.778 225 140 3 39 261 19 236 2.09e-29 114
MS.gene89655.t1 AT5G63580 33.778 225 140 3 39 261 19 236 3.07e-29 114
MS.gene89655.t1 AT3G50210 31.086 267 167 5 56 306 33 298 5.64e-28 112
MS.gene89655.t1 AT3G50210 31.086 267 167 5 56 306 33 298 5.64e-28 112
MS.gene89655.t1 AT3G50210 31.086 267 167 5 56 306 33 298 5.64e-28 112
MS.gene89655.t1 AT4G25300 33.333 183 117 5 154 333 72 252 3.11e-27 108
MS.gene89655.t1 AT3G49630 29.452 292 186 7 34 306 4 294 5.09e-27 109
MS.gene89655.t1 AT2G34555 28.571 273 176 8 39 304 27 287 8.24e-27 109
MS.gene89655.t1 AT2G19590 31.799 239 145 9 71 303 26 252 1.09e-26 108
MS.gene89655.t1 AT3G49630 30.337 267 174 5 51 306 25 290 1.21e-26 108
MS.gene89655.t1 AT5G07480 32.044 181 116 4 123 298 20 198 2.92e-26 105
MS.gene89655.t1 AT1G50960 27.899 276 186 5 38 307 39 307 4.43e-26 107
MS.gene89655.t1 AT3G49620 29.431 299 175 8 35 306 30 319 5.29e-26 107
MS.gene89655.t1 AT4G23340 31.950 241 141 11 64 292 30 259 2.50e-23 99.4
MS.gene89655.t1 AT3G46500 26.045 311 217 7 36 334 9 318 2.72e-23 99.4
MS.gene89655.t1 AT1G30040 27.419 248 163 7 27 261 6 249 6.81e-23 97.1
MS.gene89655.t1 AT1G14130 26.316 285 197 5 60 340 25 300 3.92e-22 95.9
MS.gene89655.t1 AT3G46490 27.419 310 195 11 39 324 12 315 6.12e-21 92.8
MS.gene89655.t1 AT1G02400 26.000 300 198 10 54 338 34 324 5.01e-20 90.1
MS.gene89655.t1 AT5G51310 26.531 245 160 5 63 292 24 263 7.83e-20 89.4
MS.gene89655.t1 AT3G46500 26.103 272 188 7 36 295 9 279 1.00e-19 89.0
MS.gene89655.t1 AT4G16765 34.302 172 103 6 139 301 42 212 1.87e-19 86.7
MS.gene89655.t1 AT4G16765 34.302 172 103 6 139 301 42 212 2.15e-19 86.7
MS.gene89655.t1 AT4G16765 34.302 172 103 6 139 301 42 212 2.15e-19 86.7
MS.gene89655.t1 AT4G16765 34.302 172 103 6 139 301 42 212 2.15e-19 86.7
MS.gene89655.t1 AT5G58660 25.085 295 172 9 39 301 34 311 7.29e-19 87.0
MS.gene89655.t1 AT3G50210 35.329 167 103 2 145 306 50 216 1.08e-18 85.1
MS.gene89655.t1 AT3G47190 26.712 292 181 8 38 310 31 308 1.25e-18 86.3
MS.gene89655.t1 AT3G49630 34.969 163 104 2 145 306 60 221 2.13e-18 84.3
MS.gene89655.t1 AT3G46490 27.899 276 169 11 39 290 12 281 9.54e-18 83.2
MS.gene89655.t1 AT1G35190 25.597 293 181 8 41 317 9 280 3.59e-17 81.6
MS.gene89655.t1 AT1G35190 26.756 299 193 8 41 317 9 303 9.17e-17 80.9
MS.gene89655.t1 AT4G16765 34.965 143 84 5 139 272 42 184 1.61e-15 74.3
MS.gene89655.t1 AT4G16770 27.039 233 152 6 38 257 21 248 2.28e-15 75.5
MS.gene89655.t1 AT4G23340 36.364 143 79 5 159 292 2 141 2.79e-15 74.3
MS.gene89655.t1 AT1G52820 24.900 249 163 6 57 295 32 266 4.94e-14 72.4
MS.gene89655.t1 AT4G16765 42.268 97 52 2 212 305 75 170 9.86e-14 69.7
MS.gene89655.t1 AT1G02400 26.293 232 147 9 54 271 34 255 4.87e-12 65.9
MS.gene89655.t1 AT4G03070 24.419 258 158 9 56 295 33 271 6.61e-12 66.2
MS.gene89655.t1 AT3G46500 33.871 124 78 2 214 334 60 182 1.06e-11 63.5
MS.gene89655.t1 AT2G06960 41.000 100 41 4 196 294 26 108 1.30e-11 62.4

Find 92 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGTCTCTTTGTTTAAT+TGG 0.126342 8.3:-27928841 None:intergenic
TGACCTCTCCGGTGCTAAAA+AGG 0.188290 8.3:+27928019 MS.gene89655:CDS
TTGCATCTGGTGCTGGATTT+TGG 0.194340 8.3:-27931001 None:intergenic
TTCCATCCTTCTGGCTTGTT+TGG 0.240462 8.3:-27928871 None:intergenic
AGGTCTGGTTGAGGGCATTT+TGG 0.242993 8.3:-27929039 None:intergenic
GTCACCTCTTTCCATCCTTC+TGG 0.281993 8.3:-27928880 None:intergenic
AAATGATTGTATGCAACTTT+TGG 0.287049 8.3:-27927789 None:intergenic
AACAAAAGCATGTGTTGATA+TGG 0.290834 8.3:+27928990 MS.gene89655:CDS
ATTCCAATCATTTCTCTTGC+TGG 0.302031 8.3:+27927822 MS.gene89655:CDS
AAGAATCTCATTCAATGGTT+TGG 0.305842 8.3:-27931195 None:intergenic
CTACACCATGATCAACAATT+TGG 0.326013 8.3:-27927920 None:intergenic
AATAGTCTCTTTGTTTAATT+GGG 0.340915 8.3:-27928840 None:intergenic
AGAATCTCATTCAATGGTTT+GGG 0.358688 8.3:-27931194 None:intergenic
GTTGTCAATATTGGAGATCA+TGG 0.376692 8.3:+27929195 MS.gene89655:CDS
CCCTCGAATCTAGCTTCATT+CGG 0.379151 8.3:+27927751 MS.gene89655:CDS
TACATTTCAGCAAAAGTGAT+TGG 0.382508 8.3:-27931074 None:intergenic
AGATGACCCGTTTGGCTAAA+GGG 0.386919 8.3:+27927961 MS.gene89655:CDS
CTTCAAGCTACCAGAGATAA+TGG 0.393779 8.3:+27929132 MS.gene89655:CDS
CTCCCTCTCTTATCTTCAAA+GGG 0.403982 8.3:-27931031 None:intergenic
TCTCCCTCTCTTATCTTCAA+AGG 0.407561 8.3:-27931032 None:intergenic
TTGTGGAGGCTTGTGAGAAC+TGG 0.414807 8.3:+27927889 MS.gene89655:CDS
CATTATCTCTGGTAGCTTGA+AGG 0.420066 8.3:-27929131 None:intergenic
ATCTTCCAAATTGTTGATCA+TGG 0.422841 8.3:+27927915 MS.gene89655:CDS
ACAACAAAAGCACCTTCAAT+TGG 0.424380 8.3:-27929177 None:intergenic
AGGGAGAACCAGTGAGGGAT+TGG 0.425598 8.3:+27928791 MS.gene89655:intron
CATTTCTGAGATGACCCGTT+TGG 0.447418 8.3:+27927953 MS.gene89655:CDS
AGAAGTGTTATCTGAGGCTA+TGG 0.453688 8.3:+27928948 MS.gene89655:CDS
AGAGGGAGAGAAATCTATGA+TGG 0.458444 8.3:+27931046 MS.gene89655:CDS
CCTCGAATCTAGCTTCATTC+GGG 0.458758 8.3:+27927752 MS.gene89655:CDS
GTCGTTTCAGTCCAAGAGTT+AGG 0.461473 8.3:-27929059 None:intergenic
ATCTCTCTCCAATCCCTCAC+TGG 0.461886 8.3:-27928799 None:intergenic
TAAGCAAGAATCTCATTCAA+TGG 0.462100 8.3:-27931200 None:intergenic
GAGATGACCCGTTTGGCTAA+AGG 0.463625 8.3:+27927960 MS.gene89655:CDS
AAAGGGTACACAGTTGCATC+TGG 0.468214 8.3:-27931014 None:intergenic
TGCCACCGGAGGAGAAGCTT+CGG 0.469449 8.3:+27927994 MS.gene89655:CDS
TTCAGTCCAAGAGTTAGGTC+TGG 0.473884 8.3:-27929054 None:intergenic
TACACAGTTGCATCTGGTGC+TGG 0.475425 8.3:-27931008 None:intergenic
GGAATGTTGCTATGGATAAA+CGG 0.477243 8.3:-27930980 None:intergenic
AAAGAACCCTTTAGCCAAAC+GGG 0.480120 8.3:-27927967 None:intergenic
AGCAATAGAGTAATGGTGCC+AGG 0.491479 8.3:-27929090 None:intergenic
CAAAGAACCCTTTAGCCAAA+CGG 0.497820 8.3:-27927968 None:intergenic
AAGCTTCGGTTTGACCTCTC+CGG 0.498154 8.3:+27928008 MS.gene89655:CDS
ATTACTGTTAAGCCAATTGA+AGG 0.500874 8.3:+27929165 MS.gene89655:CDS
CCCGAATGAAGCTAGATTCG+AGG 0.503173 8.3:-27927752 None:intergenic
CTATTGCTTCAAGACCTAGT+TGG 0.505718 8.3:+27929105 MS.gene89655:CDS
ATTCCAGCAAGAGAAATGAT+TGG 0.509704 8.3:-27927825 None:intergenic
TATGGATAAACGGCTGTAGT+TGG 0.512198 8.3:-27930970 None:intergenic
TTGCTTCAAGACCTAGTTGG+TGG 0.512776 8.3:+27929108 MS.gene89655:CDS
GAAGTGTTATCTGAGGCTAT+GGG 0.514714 8.3:+27928949 MS.gene89655:CDS
GCTGGAATCGACGATGTTGA+TGG 0.517720 8.3:+27927840 MS.gene89655:CDS
TGTTGCAAGTCTCTATTCTA+CGG 0.520035 8.3:-27927863 None:intergenic
GATTGCTAGGATGAAGAAGC+TGG 0.523859 8.3:+27931124 MS.gene89655:CDS
TAGCTTCTCACCGTATTGCT+CGG 0.524415 8.3:-27928902 None:intergenic
GTAAGGACCTTGAGATTGCT+AGG 0.527971 8.3:+27931111 MS.gene89655:CDS
CCTCAACCAGACCTAACTCT+TGG 0.529819 8.3:+27929048 MS.gene89655:CDS
CTGAAACGACACACTGACCC+TGG 0.530248 8.3:+27929072 MS.gene89655:CDS
TTAAACAAAGAGACTATTCA+AGG 0.538926 8.3:+27928845 MS.gene89655:CDS
CCAAGAGTTAGGTCTGGTTG+AGG 0.541014 8.3:-27929048 None:intergenic
CACATGCAGTATCTTAGTAA+TGG 0.541553 8.3:+27930909 MS.gene89655:intron
TCAAACCGAAGCTTCTCCTC+CGG 0.545617 8.3:-27927999 None:intergenic
AGGGTTCTTTGATTTGCCAC+CGG 0.546754 8.3:+27927980 MS.gene89655:CDS
TAGCTTGAAGGCCACCAACT+AGG 0.547675 8.3:-27929119 None:intergenic
GTATAGGAGGAAGATGAGTA+AGG 0.553968 8.3:+27931094 MS.gene89655:CDS
TAGGATGAAGAAGCTGGGTA+AGG 0.558401 8.3:+27931130 MS.gene89655:CDS
CAAGAGTTAGGTCTGGTTGA+GGG 0.565921 8.3:-27929047 None:intergenic
AGTTGGAATTCACCACTGCT+TGG 0.567113 8.3:-27930953 None:intergenic
AGAGACTTGCAACAAGATTG+TGG 0.571839 8.3:+27927872 MS.gene89655:CDS
GGCCAAACAAGCCAGAAGGA+TGG 0.573620 8.3:+27928869 MS.gene89655:CDS
TGTGGAGGCTTGTGAGAACT+GGG 0.586960 8.3:+27927890 MS.gene89655:CDS
TACCCTTTGAAGATAAGAGA+GGG 0.589579 8.3:+27931029 MS.gene89655:CDS
GTCTTGAAGCAATAGAGTAA+TGG 0.595794 8.3:-27929097 None:intergenic
GGGAGAGAAATCTATGATGG+AGG 0.596763 8.3:+27931049 MS.gene89655:CDS
TGCAGTATCTTAGTAATGGA+CGG 0.603103 8.3:+27930913 MS.gene89655:intron
CCGAATGAAGCTAGATTCGA+GGG 0.605123 8.3:-27927751 None:intergenic
AAAGAGGTGACCGAGCAATA+CGG 0.606761 8.3:+27928892 MS.gene89655:CDS
AACCGAAGCTTCTCCTCCGG+TGG 0.610220 8.3:-27927996 None:intergenic
GCAATAGAGTAATGGTGCCA+GGG 0.611285 8.3:-27929089 None:intergenic
AGAACTTAGGGACCTACAGA+AGG 0.616594 8.3:+27931160 MS.gene89655:CDS
CAAGCCAGAAGGATGGAAAG+AGG 0.621285 8.3:+27928876 MS.gene89655:CDS
TCTTCATCCTAGCAATCTCA+AGG 0.621342 8.3:-27931118 None:intergenic
TTTACAGGGAGAACCAGTGA+GGG 0.622825 8.3:+27928786 MS.gene89655:intron
ATTGCTAGGATGAAGAAGCT+GGG 0.635342 8.3:+27931125 MS.gene89655:CDS
GTTCTTTGATTTGCCACCGG+AGG 0.635438 8.3:+27927983 MS.gene89655:CDS
AGGTGGCCAAACAAGCCAGA+AGG 0.637737 8.3:+27928865 MS.gene89655:CDS
GTACCCTTTGAAGATAAGAG+AGG 0.641872 8.3:+27931028 MS.gene89655:CDS
GCTATTAGAAGTGTTATCTG+AGG 0.649643 8.3:+27928942 MS.gene89655:CDS
AAGTGTTATCTGAGGCTATG+GGG 0.652343 8.3:+27928950 MS.gene89655:CDS
CCAGAGATAATGGTAAAACG+TGG 0.652898 8.3:+27929142 MS.gene89655:CDS
AAATGCTGATCACCAAGCAG+TGG 0.664697 8.3:+27930941 MS.gene89655:CDS
GACTTGCAACAAGATTGTGG+AGG 0.698738 8.3:+27927875 MS.gene89655:CDS
AACAAAGAGACTATTCAAGG+TGG 0.723276 8.3:+27928848 MS.gene89655:CDS
GTGGAGGCTTGTGAGAACTG+GGG 0.764612 8.3:+27927891 MS.gene89655:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr8.3:27929779-27929760 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG + chr8.3:27929760-27929779 MS.gene89655:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr8.3:27929779-27929760 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr8.3:27929780-27929761 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr8.3:27929761-27929780 MS.gene89655:intron 0.0%
!! TATATATATATATATATATA+TGG - chr8.3:27929780-27929761 None:intergenic 0.0%
!! CAAAAATAATATATCTAATA+TGG - chr8.3:27928570-27928589 None:intergenic 10.0%
!!! CATATTAGATATATTATTTT+TGG + chr8.3:27928568-27928587 MS.gene89655:intron 10.0%
!!! TAACATACTATTATTTTTTT+TGG - chr8.3:27930661-27930680 None:intergenic 10.0%
!! ATTCATCTAACTAATAATTA+TGG + chr8.3:27928645-27928664 MS.gene89655:intron 15.0%
!! TAATACTAAAATTATTCGAA+TGG + chr8.3:27930569-27930588 MS.gene89655:intron 15.0%
!! TTAAGATAGTGTATAATAAA+TGG + chr8.3:27930705-27930724 MS.gene89655:intron 15.0%
!! TTATACACTATCTTAATTTA+TGG - chr8.3:27930701-27930720 None:intergenic 15.0%
!!! AACAAAATTATGACTTTTAA+AGG - chr8.3:27929675-27929694 None:intergenic 15.0%
!!! ATCATTTTCCTATATATATA+GGG - chr8.3:27929571-27929590 None:intergenic 15.0%
!!! ATGTTAGTTTGATATATATT+TGG - chr8.3:27928330-27928349 None:intergenic 15.0%
!!! CTTTTTACTAAAAATAGTAA+AGG - chr8.3:27928498-27928517 None:intergenic 15.0%
!!! TATCATTTTCCTATATATAT+AGG - chr8.3:27929572-27929591 None:intergenic 15.0%
!! AAGTGCAATTTAGATTAAAA+TGG + chr8.3:27928404-27928423 MS.gene89655:intron 20.0%
!! AATAATAATCAAATATGGCA+AGG - chr8.3:27928723-27928742 None:intergenic 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG + chr8.3:27930510-27930529 MS.gene89655:intron 20.0%
!! ATGGGAATAATAATCAAATA+TGG - chr8.3:27928728-27928747 None:intergenic 20.0%
!! ATGGGTTTATCTAAAAAAAT+TGG - chr8.3:27928218-27928237 None:intergenic 20.0%
!! GAAACATACCAAAAATATTA+GGG + chr8.3:27928528-27928547 MS.gene89655:intron 20.0%
!! GTAACAAAATATAAGCAAAA+TGG - chr8.3:27928246-27928265 None:intergenic 20.0%
!! TAACATTTCCCTATATATAT+AGG + chr8.3:27929560-27929579 MS.gene89655:intron 20.0%
!! TGAAACATACCAAAAATATT+AGG + chr8.3:27928527-27928546 MS.gene89655:intron 20.0%
!!! AAATCATTGAAAATGGTTTT+AGG + chr8.3:27930760-27930779 MS.gene89655:intron 20.0%
!!! AATAGTCTCTTTGTTTAATT+GGG - chr8.3:27928843-27928862 None:intergenic 20.0%
!!! CATGGAAATAATTTTTTACA+GGG + chr8.3:27928772-27928791 MS.gene89655:intron 20.0%
!!! TGATTTGCGAAAATTTAAAT+TGG - chr8.3:27930746-27930765 None:intergenic 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - chr8.3:27930348-27930367 None:intergenic 20.0%
! AAAGTCTACAAAATTCTTCA+AGG - chr8.3:27930597-27930616 None:intergenic 25.0%
! AAATAGTAAAGGTTCATCTT+TGG - chr8.3:27928487-27928506 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG - chr8.3:27929878-27929897 None:intergenic 25.0%
! AAGTTGTTAAATACACCTTA+AGG - chr8.3:27930024-27930043 None:intergenic 25.0%
! ACACCTTAATAAAAACTAGT+GGG + chr8.3:27930067-27930086 MS.gene89655:intron 25.0%
! AGTGTTAATGGAAGAAAATT+TGG - chr8.3:27928078-27928097 None:intergenic 25.0%
! ATAAGCAAAATGGATCTAAT+GGG - chr8.3:27928236-27928255 None:intergenic 25.0%
! ATGTATGTAGATAGTGTTAA+TGG - chr8.3:27928090-27928109 None:intergenic 25.0%
! CTAAATAGGTCAAGTAATAT+GGG + chr8.3:27930524-27930543 MS.gene89655:intron 25.0%
! GGAACATTAAATTAGTATGT+GGG - chr8.3:27928672-27928691 None:intergenic 25.0%
! GTTGGCATTCATAAAAAAAA+TGG - chr8.3:27928693-27928712 None:intergenic 25.0%
! TAAGGATGAAAAAGAACTTA+GGG + chr8.3:27931148-27931167 MS.gene89655:CDS 25.0%
! TATAAGCAAAATGGATCTAA+TGG - chr8.3:27928237-27928256 None:intergenic 25.0%
! TCTAAATAGGTCAAGTAATA+TGG + chr8.3:27930523-27930542 MS.gene89655:intron 25.0%
! TGGAACATTAAATTAGTATG+TGG - chr8.3:27928673-27928692 None:intergenic 25.0%
! TTAAACAAAGAGACTATTCA+AGG + chr8.3:27928845-27928864 MS.gene89655:CDS 25.0%
!! AAATGATTGTATGCAACTTT+TGG - chr8.3:27927792-27927811 None:intergenic 25.0%
!! AACATTATTTCAAGAAGTGT+TGG + chr8.3:27930783-27930802 MS.gene89655:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG + chr8.3:27929920-27929939 MS.gene89655:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG - chr8.3:27929939-27929920 None:intergenic 25.0%
!! CAAGAAAATACTTCTACTTT+TGG + chr8.3:27929507-27929526 MS.gene89655:intron 25.0%
!! GAATAGTCTCTTTGTTTAAT+TGG - chr8.3:27928844-27928863 None:intergenic 25.0%
!! TAGGTAAACCCTAATATTTT+TGG - chr8.3:27928539-27928558 None:intergenic 25.0%
!! TTTTCGCAAATCATTGAAAA+TGG + chr8.3:27930753-27930772 MS.gene89655:intron 25.0%
!!! ATTTGAATTCCTTAACTTGT+TGG + chr8.3:27929717-27929736 MS.gene89655:intron 25.0%
!!! GCATGGAAATAATTTTTTAC+AGG + chr8.3:27928771-27928790 MS.gene89655:intron 25.0%
!!! TCAATTTGCTTGTATTTTGT+CGG - chr8.3:27928180-27928199 None:intergenic 25.0%
!!! TTTGAATTCCTTAACTTGTT+GGG + chr8.3:27929718-27929737 MS.gene89655:intron 25.0%
AAATGATAACATATGCCCTA+AGG + chr8.3:27929584-27929603 MS.gene89655:intron 30.0%
AAGAATCTCATTCAATGGTT+TGG - chr8.3:27931198-27931217 None:intergenic 30.0%
AATGATAACATATGCCCTAA+GGG + chr8.3:27929585-27929604 MS.gene89655:intron 30.0%
AGAAAAATAGAGTCAATGCA+TGG + chr8.3:27930480-27930499 MS.gene89655:intron 30.0%
AGAATCTCATTCAATGGTTT+GGG - chr8.3:27931197-27931216 None:intergenic 30.0%
ATATTAGGGTTTACCTAGAT+CGG + chr8.3:27928542-27928561 MS.gene89655:intron 30.0%
ATCAACTAGGTCAAGTAATA+TGG - chr8.3:27930312-27930331 None:intergenic 30.0%
ATCTTCCAAATTGTTGATCA+TGG + chr8.3:27927915-27927934 MS.gene89655:CDS 30.0%
ATTACTGTTAAGCCAATTGA+AGG + chr8.3:27929165-27929184 MS.gene89655:CDS 30.0%
CAAAAGAATATGTGTGTTTG+CGG + chr8.3:27928265-27928284 MS.gene89655:intron 30.0%
CACACCTTAATAAAAACTAG+TGG + chr8.3:27930066-27930085 MS.gene89655:intron 30.0%
CACTATACGACAATCATAAT+GGG - chr8.3:27928746-27928765 None:intergenic 30.0%
GTAAGGATGAAAAAGAACTT+AGG + chr8.3:27931147-27931166 MS.gene89655:CDS 30.0%
TAAGCAAGAATCTCATTCAA+TGG - chr8.3:27931203-27931222 None:intergenic 30.0%
TACATTTCAGCAAAAGTGAT+TGG - chr8.3:27931077-27931096 None:intergenic 30.0%
TATCAAACTAACATGCAGTT+TGG + chr8.3:27928336-27928355 MS.gene89655:intron 30.0%
TCAACTAGGTCAAGTAATAT+GGG - chr8.3:27930311-27930330 None:intergenic 30.0%
TCACTATACGACAATCATAA+TGG - chr8.3:27928747-27928766 None:intergenic 30.0%
! AACAAAAGCATGTGTTGATA+TGG + chr8.3:27928990-27929009 MS.gene89655:CDS 30.0%
! AGATATTTGAGAGTTTTCAC+TGG - chr8.3:27927717-27927736 None:intergenic 30.0%
! ATGATAGATGCAAGATTTTG+AGG - chr8.3:27928125-27928144 None:intergenic 30.0%
! CACACCTTCTAAAAAATAAG+TGG + chr8.3:27929919-27929938 MS.gene89655:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG - chr8.3:27929938-27929919 None:intergenic 30.0%
! GATTAAGCATGTGTTTTACT+GGG - chr8.3:27930274-27930293 None:intergenic 30.0%
! TATATATATAGGGGTTTGCT+AGG - chr8.3:27930098-27930117 None:intergenic 30.0%
! TGATTAAGCATGTGTTTTAC+TGG - chr8.3:27930275-27930294 None:intergenic 30.0%
! TTTTAGCAACATTCACCTTA+AGG + chr8.3:27930006-27930025 MS.gene89655:intron 30.0%
!! ATGATTTGCTGTTATTGCAT+GGG + chr8.3:27930846-27930865 MS.gene89655:intron 30.0%
!! TATGATTTGCTGTTATTGCA+TGG + chr8.3:27930845-27930864 MS.gene89655:intron 30.0%
!! TCACTTTTGCTGAAATGTAT+AGG + chr8.3:27931078-27931097 MS.gene89655:CDS 30.0%
!! TGATTTCTTTAATTTGCTCG+TGG + chr8.3:27930886-27930905 MS.gene89655:intron 30.0%
!! TTGAATTCCTTAACTTGTTG+GGG + chr8.3:27929719-27929738 MS.gene89655:intron 30.0%
!!! ACACCCACTAGTTTTTATTA+AGG - chr8.3:27930073-27930092 None:intergenic 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG + chr8.3:27929979-27929998 MS.gene89655:intron 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG - chr8.3:27929998-27929979 None:intergenic 30.0%
AAAAAGTTCAATTCCACGTG+TGG - chr8.3:27930250-27930269 None:intergenic 35.0%
AACAAAGAGACTATTCAAGG+TGG + chr8.3:27928848-27928867 MS.gene89655:CDS 35.0%
AATAGGTCAAGTAATATGGG+AGG + chr8.3:27930527-27930546 MS.gene89655:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr8.3:27929839-27929858 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+GGG + chr8.3:27930528-27930547 MS.gene89655:intron 35.0%
ATCTAATATGGATCCGATCT+AGG - chr8.3:27928558-27928577 None:intergenic 35.0%
ATTCCAATCATTTCTCTTGC+TGG + chr8.3:27927822-27927841 MS.gene89655:CDS 35.0%
ATTCCAGCAAGAGAAATGAT+TGG - chr8.3:27927828-27927847 None:intergenic 35.0%
ATTTCTTAACATGTGCCCTT+AGG - chr8.3:27929603-27929622 None:intergenic 35.0%
CACATGCAGTATCTTAGTAA+TGG + chr8.3:27930909-27930928 MS.gene89655:intron 35.0%
CATACGTGATAGAATCAACT+AGG - chr8.3:27930325-27930344 None:intergenic 35.0%
CTACACCATGATCAACAATT+TGG - chr8.3:27927923-27927942 None:intergenic 35.0%
GGAATGTTGCTATGGATAAA+CGG - chr8.3:27930983-27931002 None:intergenic 35.0%
GTCTTGAAGCAATAGAGTAA+TGG - chr8.3:27929100-27929119 None:intergenic 35.0%
GTGTGTCAACATCTGAAAAA+TGG + chr8.3:27928460-27928479 MS.gene89655:intron 35.0%
GTTGTCAATATTGGAGATCA+TGG + chr8.3:27929195-27929214 MS.gene89655:CDS 35.0%
TGGAAAAGAGTAGGTGAATA+TGG + chr8.3:27930803-27930822 MS.gene89655:intron 35.0%
TGTATGTTAGCAACTCCTAT+AGG - chr8.3:27929962-27929981 None:intergenic 35.0%
TGTTGCAAGTCTCTATTCTA+CGG - chr8.3:27927866-27927885 None:intergenic 35.0%
TTTCTTAACATGTGCCCTTA+GGG - chr8.3:27929602-27929621 None:intergenic 35.0%
! CTTTTGCTGAAATGTATAGG+AGG + chr8.3:27931081-27931100 MS.gene89655:CDS 35.0%
! TACCCTTTGAAGATAAGAGA+GGG + chr8.3:27931029-27931048 MS.gene89655:CDS 35.0%
! TGCAGTATCTTAGTAATGGA+CGG + chr8.3:27930913-27930932 MS.gene89655:intron 35.0%
! TTTTAGCAAGCTACACCTTA+AGG + chr8.3:27929860-27929879 MS.gene89655:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - chr8.3:27929548-27929567 None:intergenic 35.0%
!! AAGAAGTGTTGGAAAAGAGT+AGG + chr8.3:27930794-27930813 MS.gene89655:intron 35.0%
!! ACAACAAAAGCACCTTCAAT+TGG - chr8.3:27929180-27929199 None:intergenic 35.0%
!! GCTATTAGAAGTGTTATCTG+AGG + chr8.3:27928942-27928961 MS.gene89655:CDS 35.0%
!! GGTGCTTTTGTTGTCAATAT+TGG + chr8.3:27929186-27929205 MS.gene89655:CDS 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr8.3:27929833-27929852 MS.gene89655:intron 35.0%
!!! TGGATTTTGGAATGTTGCTA+TGG - chr8.3:27930991-27931010 None:intergenic 35.0%
AAAGAACCCTTTAGCCAAAC+GGG - chr8.3:27927970-27927989 None:intergenic 40.0%
AACTCCTATAGGCATTTGCT+AGG - chr8.3:27929951-27929970 None:intergenic 40.0%
AGAGACTTGCAACAAGATTG+TGG + chr8.3:27927872-27927891 MS.gene89655:CDS 40.0%
AGAGGGAGAGAAATCTATGA+TGG + chr8.3:27931046-27931065 MS.gene89655:CDS 40.0%
ATAAATGGTCACACTTCACG+TGG + chr8.3:27930720-27930739 MS.gene89655:intron 40.0%
ATATGGCAAGGAACATGAGT+TGG - chr8.3:27928711-27928730 None:intergenic 40.0%
ATTGCTAGGATGAAGAAGCT+GGG + chr8.3:27931125-27931144 MS.gene89655:CDS 40.0%
CAAAGAACCCTTTAGCCAAA+CGG - chr8.3:27927971-27927990 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG - chr8.3:27929840-27929859 None:intergenic 40.0%
CATTATCTCTGGTAGCTTGA+AGG - chr8.3:27929134-27929153 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+CGG - chr8.3:27930307-27930326 None:intergenic 40.0%
CTATTGCTTCAAGACCTAGT+TGG + chr8.3:27929105-27929124 MS.gene89655:CDS 40.0%
CTCCCTCTCTTATCTTCAAA+GGG - chr8.3:27931034-27931053 None:intergenic 40.0%
CTTCAAGCTACCAGAGATAA+TGG + chr8.3:27929132-27929151 MS.gene89655:CDS 40.0%
GAATATGTGTGTTTGCGGTT+CGG + chr8.3:27928270-27928289 MS.gene89655:intron 40.0%
GATATTGTATGTTCCACACG+TGG + chr8.3:27930234-27930253 MS.gene89655:intron 40.0%
GTATAGGAGGAAGATGAGTA+AGG + chr8.3:27931094-27931113 MS.gene89655:CDS 40.0%
GTATCCTAGCAAATGCCTAT+AGG + chr8.3:27929944-27929963 MS.gene89655:intron 40.0%
TATGGATAAACGGCTGTAGT+TGG - chr8.3:27930973-27930992 None:intergenic 40.0%
TCTCCCTCTCTTATCTTCAA+AGG - chr8.3:27931035-27931054 None:intergenic 40.0%
TCTTCATCCTAGCAATCTCA+AGG - chr8.3:27931121-27931140 None:intergenic 40.0%
TGTCGTATAGTGAACATGCA+TGG + chr8.3:27928754-27928773 MS.gene89655:intron 40.0%
TTCCTTAACTTATGCCCCAA+GGG + chr8.3:27929530-27929549 MS.gene89655:intron 40.0%
! AAGTGTTATCTGAGGCTATG+GGG + chr8.3:27928950-27928969 MS.gene89655:CDS 40.0%
! ACATGCAGTTTGGTTCACTT+TGG + chr8.3:27928346-27928365 MS.gene89655:intron 40.0%
! CCACGTTTTACCATTATCTC+TGG - chr8.3:27929145-27929164 None:intergenic 40.0%
! CCAGAGATAATGGTAAAACG+TGG + chr8.3:27929142-27929161 MS.gene89655:CDS 40.0%
! GAAGTGTTATCTGAGGCTAT+GGG + chr8.3:27928949-27928968 MS.gene89655:CDS 40.0%
! GTACCCTTTGAAGATAAGAG+AGG + chr8.3:27931028-27931047 MS.gene89655:CDS 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG - chr8.3:27929547-27929566 None:intergenic 40.0%
!! AGAAGTGTTATCTGAGGCTA+TGG + chr8.3:27928948-27928967 MS.gene89655:CDS 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr8.3:27929391-27929410 MS.gene89655:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr8.3:27929549-27929568 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr8.3:27929390-27929409 MS.gene89655:intron 40.0%
!! TTCCTTAACTTGTGCCCTTA+GGG - chr8.3:27929408-27929427 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr8.3:27929832-27929851 MS.gene89655:intron 40.0%
AAAGAGGTGACCGAGCAATA+CGG + chr8.3:27928892-27928911 MS.gene89655:CDS 45.0%
AAATGCTGATCACCAAGCAG+TGG + chr8.3:27930941-27930960 MS.gene89655:CDS 45.0%
AGAACTTAGGGACCTACAGA+AGG + chr8.3:27931160-27931179 MS.gene89655:CDS 45.0%
AGATGACCCGTTTGGCTAAA+GGG + chr8.3:27927961-27927980 MS.gene89655:CDS 45.0%
AGCAATAGAGTAATGGTGCC+AGG - chr8.3:27929093-27929112 None:intergenic 45.0%
AGTTGGAATTCACCACTGCT+TGG - chr8.3:27930956-27930975 None:intergenic 45.0%
CAAGAGTTAGGTCTGGTTGA+GGG - chr8.3:27929050-27929069 None:intergenic 45.0%
CCGAATGAAGCTAGATTCGA+GGG - chr8.3:27927754-27927773 None:intergenic 45.0%
GACTTGCAACAAGATTGTGG+AGG + chr8.3:27927875-27927894 MS.gene89655:CDS 45.0%
GATTGCTAGGATGAAGAAGC+TGG + chr8.3:27931124-27931143 MS.gene89655:CDS 45.0%
GGGAGAGAAATCTATGATGG+AGG + chr8.3:27931049-27931068 MS.gene89655:CDS 45.0%
GTAAGGACCTTGAGATTGCT+AGG + chr8.3:27931111-27931130 MS.gene89655:CDS 45.0%
GTCAAGTAATATGGGACGGA+GGG - chr8.3:27930303-27930322 None:intergenic 45.0%
GTCGTTTCAGTCCAAGAGTT+AGG - chr8.3:27929062-27929081 None:intergenic 45.0%
GTTCCTTAACTTATGCCCCA+AGG + chr8.3:27929529-27929548 MS.gene89655:intron 45.0%
TAGCTTCTCACCGTATTGCT+CGG - chr8.3:27928905-27928924 None:intergenic 45.0%
TAGGATGAAGAAGCTGGGTA+AGG + chr8.3:27931130-27931149 MS.gene89655:CDS 45.0%
TCTTGTGCCCCAACAAGTTA+AGG - chr8.3:27929729-27929748 None:intergenic 45.0%
TTCAGTCCAAGAGTTAGGTC+TGG - chr8.3:27929057-27929076 None:intergenic 45.0%
TTGCTTCAAGACCTAGTTGG+TGG + chr8.3:27929108-27929127 MS.gene89655:CDS 45.0%
TTTACAGGGAGAACCAGTGA+GGG + chr8.3:27928786-27928805 MS.gene89655:intron 45.0%
! AAAGGGTACACAGTTGCATC+TGG - chr8.3:27931017-27931036 None:intergenic 45.0%
! CCCTCGAATCTAGCTTCATT+CGG + chr8.3:27927751-27927770 MS.gene89655:CDS 45.0%
! CCTCGAATCTAGCTTCATTC+GGG + chr8.3:27927752-27927771 MS.gene89655:CDS 45.0%
! GCAATAGAGTAATGGTGCCA+GGG - chr8.3:27929092-27929111 None:intergenic 45.0%
! GCTCAAGTTTTGCCTTCTGT+AGG - chr8.3:27931175-27931194 None:intergenic 45.0%
! TTTTACAGGGAGAACCAGTG+AGG + chr8.3:27928785-27928804 MS.gene89655:intron 45.0%
!! AGGGTTCTTTGATTTGCCAC+CGG + chr8.3:27927980-27927999 MS.gene89655:CDS 45.0%
!! CATTTCTGAGATGACCCGTT+TGG + chr8.3:27927953-27927972 MS.gene89655:CDS 45.0%
!! GTTCCTTAACTTGTGCCCTT+AGG - chr8.3:27929409-27929428 None:intergenic 45.0%
!! TTCCATCCTTCTGGCTTGTT+TGG - chr8.3:27928874-27928893 None:intergenic 45.0%
!! TTGCATCTGGTGCTGGATTT+TGG - chr8.3:27931004-27931023 None:intergenic 45.0%
!! AAATCATAAAAATTAAAAAA+TGG - chr8.3:27930872-27930891 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG - chr8.3:27930150-27930131 None:intergenic 5.0%
!! TACTATTATAATATATATAT+GGG + chr8.3:27929367-27929386 MS.gene89655:intron 5.0%
!! TTACTATTATAATATATATA+TGG + chr8.3:27929366-27929385 MS.gene89655:intron 5.0%
!!! AATTCTTTTTTTTTTTTTTA+AGG + chr8.3:27929240-27929259 MS.gene89655:intron 5.0%
ATCTCTCTCCAATCCCTCAC+TGG - chr8.3:27928802-27928821 None:intergenic 50.0%
CAAGCCAGAAGGATGGAAAG+AGG + chr8.3:27928876-27928895 MS.gene89655:CDS 50.0%
CCAAGAGTTAGGTCTGGTTG+AGG - chr8.3:27929051-27929070 None:intergenic 50.0%
CCCGAATGAAGCTAGATTCG+AGG - chr8.3:27927755-27927774 None:intergenic 50.0%
CCTCAACCAGACCTAACTCT+TGG + chr8.3:27929048-27929067 MS.gene89655:CDS 50.0%
GAGATGACCCGTTTGGCTAA+AGG + chr8.3:27927960-27927979 MS.gene89655:CDS 50.0%
GCTGGAATCGACGATGTTGA+TGG + chr8.3:27927840-27927859 MS.gene89655:CDS 50.0%
GGTCAAGTAATATGGGACGG+AGG - chr8.3:27930304-27930323 None:intergenic 50.0%
GTCACCTCTTTCCATCCTTC+TGG - chr8.3:27928883-27928902 None:intergenic 50.0%
TACACAGTTGCATCTGGTGC+TGG - chr8.3:27931011-27931030 None:intergenic 50.0%
TAGCTTGAAGGCCACCAACT+AGG - chr8.3:27929122-27929141 None:intergenic 50.0%
TCAAACCGAAGCTTCTCCTC+CGG - chr8.3:27928002-27928021 None:intergenic 50.0%
TGCCCTTGGGGCATAAGTTA+AGG - chr8.3:27929535-27929554 None:intergenic 50.0%
TGTGGAGGCTTGTGAGAACT+GGG + chr8.3:27927890-27927909 MS.gene89655:CDS 50.0%
TTGTGGAGGCTTGTGAGAAC+TGG + chr8.3:27927889-27927908 MS.gene89655:CDS 50.0%
! AAGCTTCGGTTTGACCTCTC+CGG + chr8.3:27928008-27928027 MS.gene89655:CDS 50.0%
! GACCTCTCCGGTGCTAAAAA+GGG + chr8.3:27928020-27928039 MS.gene89655:CDS 50.0%
! TGACCTCTCCGGTGCTAAAA+AGG + chr8.3:27928019-27928038 MS.gene89655:CDS 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG + chr8.3:27929403-27929422 MS.gene89655:intron 50.0%
!! GAAGCCACCCTTTTTAGCAC+CGG - chr8.3:27928030-27928049 None:intergenic 50.0%
!! GTTCTTTGATTTGCCACCGG+AGG + chr8.3:27927983-27928002 MS.gene89655:CDS 50.0%
!!! AGGTCTGGTTGAGGGCATTT+TGG - chr8.3:27929042-27929061 None:intergenic 50.0%
!!! GGTCTGGTTGAGGGCATTTT+GGG - chr8.3:27929041-27929060 None:intergenic 50.0%
AGGGAGAACCAGTGAGGGAT+TGG + chr8.3:27928791-27928810 MS.gene89655:intron 55.0%
AGGTGGCCAAACAAGCCAGA+AGG + chr8.3:27928865-27928884 MS.gene89655:CDS 55.0%
CTGAAACGACACACTGACCC+TGG + chr8.3:27929072-27929091 MS.gene89655:CDS 55.0%
GGCCAAACAAGCCAGAAGGA+TGG + chr8.3:27928869-27928888 MS.gene89655:CDS 55.0%
GTGGAGGCTTGTGAGAACTG+GGG + chr8.3:27927891-27927910 MS.gene89655:CDS 55.0%
! CTCTCCGGTGCTAAAAAGGG+TGG + chr8.3:27928023-27928042 MS.gene89655:CDS 55.0%
!! CACCCTTTTTAGCACCGGAG+AGG - chr8.3:27928025-27928044 None:intergenic 55.0%
AACCGAAGCTTCTCCTCCGG+TGG - chr8.3:27927999-27928018 None:intergenic 60.0%
TGCCACCGGAGGAGAAGCTT+CGG + chr8.3:27927994-27928013 MS.gene89655:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 27927708 27931223 27927708 ID=MS.gene89655
chr8.3 mRNA 27927708 27931223 27927708 ID=MS.gene89655.t1;Parent=MS.gene89655
chr8.3 exon 27927708 27928070 27927708 ID=MS.gene89655.t1.exon1;Parent=MS.gene89655.t1
chr8.3 CDS 27927708 27928070 27927708 ID=cds.MS.gene89655.t1;Parent=MS.gene89655.t1
chr8.3 exon 27928793 27929221 27928793 ID=MS.gene89655.t1.exon2;Parent=MS.gene89655.t1
chr8.3 CDS 27928793 27929221 27928793 ID=cds.MS.gene89655.t1;Parent=MS.gene89655.t1
chr8.3 exon 27930918 27931223 27930918 ID=MS.gene89655.t1.exon3;Parent=MS.gene89655.t1
chr8.3 CDS 27930918 27931223 27930918 ID=cds.MS.gene89655.t1;Parent=MS.gene89655.t1
Gene Sequence

>MS.gene89655

ATGGCACCAGTGAAAACTCTCAAATATCTAGCTCAAGAAAAGACCCTCGAATCTAGCTTCATTCGGGATGAAAGTGAGCGTCCAAAAGTTGCATACAATCATTTCAGCAATGAGATTCCAATCATTTCTCTTGCTGGAATCGACGATGTTGATGGCCGTAGAATAGAGACTTGCAACAAGATTGTGGAGGCTTGTGAGAACTGGGGTATCTTCCAAATTGTTGATCATGGTGTAGATCAAAAGCTCATTTCTGAGATGACCCGTTTGGCTAAAGGGTTCTTTGATTTGCCACCGGAGGAGAAGCTTCGGTTTGACCTCTCCGGTGCTAAAAAGGGTGGCTTCATAGTCTCTAGTCATCTTCAAGTAACCAAATTTTCTTCCATTAACACTATCTACATACATTGTCTCTTTTCACCTCAAAATCTTGCATCTATCATTGCTAAAATTTATAAGCACATATAAAAGAACACCGACAAAATACAAGCAAATTGATCTAATCAAATGTGTCCAATTTTTTTAGATAAACCCATTAGATCCATTTTGCTTATATTTTGTTACAAAAGAATATGTGTGTTTGCGGTTCGGTTTGTATCTATTTTAAAGCTAAAAATCATATGATCCAAATATATATCAAACTAACATGCAGTTTGGTTCACTTTGGATTGTTTCTAAAAAAAAATTGTTATCTGATTAATTAAGTGCAATTTAGATTAAAATGGTTTGTTGAATTTTCATGAACACAAAATTGTAGAGTGTGTCAACATCTGAAAAATGGTCCAAAGATGAACCTTTACTATTTTTAGTAAAAAGATGTTTTACTGAAACATACCAAAAATATTAGGGTTTACCTAGATCGGATCCATATTAGATATATTATTTTTGGAGCAATATTAGATATATTTATTAAAACATACATAAATTATATATTTATATAATGATTCATCTAACTAATAATTATGGACCCACATACTAATTTAATGTTCCATTTTTTTTATGAATGCCAACTCATGTTCCTTGCCATATTTGATTATTATTCCCATTATGATTGTCGTATAGTGAACATGCATGGAAATAATTTTTTACAGGGAGAACCAGTGAGGGATTGGAGAGAGATGATGATATATTTTTCATACCCAATTAAACAAAGAGACTATTCAAGGTGGCCAAACAAGCCAGAAGGATGGAAAGAGGTGACCGAGCAATACGGTGAGAAGCTAATGAGTTTATCATGCAAGCTATTAGAAGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTCTAACAAAAGCATGTGTTGATATGGATCAAAAAGTTGTGATCAATTACTACCCAAAATGCCCTCAACCAGACCTAACTCTTGGACTGAAACGACACACTGACCCTGGCACCATTACTCTATTGCTTCAAGACCTAGTTGGTGGCCTTCAAGCTACCAGAGATAATGGTAAAACGTGGATTACTGTTAAGCCAATTGAAGGTGCTTTTGTTGTCAATATTGGAGATCATGGTCACGTGAGTACAGTTCTATGCAATTCTTTTTTTTTTTTTTAAGGAAGTTCTATGCAAATTATTAAAAGAAGTTATTGTTTTTCAATATATATCATTTATAATACTATTTACTTATCTGAGAACATAAAAAAAATTAGAGTTAAAACATTACTATTATAATATATATATGGGTCATGTTAACTTGTGCCCTAAGGGCACAAGTTAAGGAACTTAAAATAGAATTAAACAATAAATTATATGTTGAAAAGATAACTTTTGAAACTTTCAAGACATTGAATGCACAATTTTCAAGAAAATACTTCTACTTTTGGTTCCTTAACTTATGCCCCAAGGGCACAAGTTAACATTTCCCTATATATATAGGAAAATGATAACATATGCCCTAAGGGCACATGTTAAGAAATTTAAAATAGAAACAATTGTCTCAAAAGTTGTGCATTCAACTTTATTCAACCTTTAAAAGTCATAATTTTGTTGTTTTCTATATAAAGTTTCTAAATTTGAATTCCTTAACTTGTTGGGGCACAAGATAACAAGACCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGGATTTGCTAGAACACACCCACTAGTTTTTATGTGGGAGTGTTTTAGCAAGCTACACCTTAAGGTGTATTTAACTACTTTTTAGTTATAACTTGCTAAAACACACCTTCTAAAAAATAAGTGGGTGTATCCTAGCAAATGCCTATAGGAGTTGCTAACATACACCCACTTATTTTTTAGAAGGTGTGTTTTAGCAACATTCACCTTAAGGTGTATTTAACAACTTTTTAGTTATATCTTTGCTAAAACACACCTTAATAAAAACTAGTGGGTGTATCCTAGCAAACCCCTATATATATATATATATATATATATATATATATATATATATAGACACACACGACAGCTATAAGATATAGAGAATATTTTATTGCATGCTGTCTTATTTTTAGTAGCGTAATGTTGCAGCTTTCACAGATATTGTATGTTCCACACGTGGAATTGAACTTTTTTCCCAGTAAAACACATGCTTAATCACTACTCCCTCCGTCCCATATTACTTGACCTAGTTGATTCTATCACGTATGCCAATGCACAATTTTAAACTTAAATTTCTTTAATAATCTAGTAGAAAAAATTACGAAAATTTGATATTTTGAAAATATTAATCGAGACGAATCTAACAACATCTTATATGCTATATTTTGTTTTTATATATTAGTAGAAAAATAGAGTCAATGCATGGTACATGAATAGTGCAAATATTCTAAATAGGTCAAGTAATATGGGAGGGAGAGAGTATTAAAATAGCTAATACTAAAATTATTCGAATGGATCCTTGAAGAATTTTGTAGACTTTGAAATCTTTTGTCAATAAATAAGTATGTTACGTAGTTTTTACCAAAAAAAATAATAGTATGTTAGATAGAAAGTAGATACTCCATAAATTAAGATAGTGTATAATAAATGGTCACACTTCACGTGGCCAATTTAAATTTTCGCAAATCATTGAAAATGGTTTTAGGAACATTATTTCAAGAAGTGTTGGAAAAGAGTAGGTGAATATGGCTCATTACTTTAATCATTTTATGATTTGCTGTTATTGCATGGGCCATTTTTTAATTTTTATGATTTCTTTAATTTGCTCGTGGCACATGCAGTATCTTAGTAATGGACGGTTCAAAAATGCTGATCACCAAGCAGTGGTGAATTCCAACTACAGCCGTTTATCCATAGCAACATTCCAAAATCCAGCACCAGATGCAACTGTGTACCCTTTGAAGATAAGAGAGGGAGAGAAATCTATGATGGAGGAACCAATCACTTTTGCTGAAATGTATAGGAGGAAGATGAGTAAGGACCTTGAGATTGCTAGGATGAAGAAGCTGGGTAAGGATGAAAAAGAACTTAGGGACCTACAGAAGGCAAAACTTGAGCCCAAACCATTGAATGAGATTCTTGCTTAG
Protein sequence

>MS.gene89655.t1

MAPVKTLKYLAQEKTLESSFIRDESERPKVAYNHFSNEIPIISLAGIDDVDGRRIETCNKIVEACENWGIFQIVDHGVDQKLISEMTRLAKGFFDLPPEEKLRFDLSGAKKGGFIVSSHLQGEPVRDWREMMIYFSYPIKQRDYSRWPNKPEGWKEVTEQYGEKLMSLSCKLLEVLSEAMGLEKEALTKACVDMDQKVVINYYPKCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDNGKTWITVKPIEGAFVVNIGDHGHYLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPDATVYPLKIREGEKSMMEEPITFAEMYRRKMSKDLEIARMKKLGKDEKELRDLQKAKLEPKPLNEILA