Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002551.t1 | XP_003593733.1 | 98.9 | 533 | 6 | 0 | 1 | 533 | 1 | 533 | 0.00E+00 | 1082 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002551.t1 | Q9SKT6 | 80.0 | 536 | 104 | 2 | 1 | 533 | 1 | 536 | 7.4e-257 | 887.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002551.t1 | G7IKA2 | 98.9 | 533 | 6 | 0 | 1 | 533 | 1 | 533 | 0.0e+00 | 1082.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene002551 | MS.gene027296 | PPI |
MS.gene002551 | MS.gene84430 | PPI |
MS.gene002551 | MS.gene022991 | PPI |
MS.gene002551 | MS.gene051724 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002551.t1 | MTR_2g015550 | 98.874 | 533 | 6 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1109 |
MS.gene002551.t1 | MTR_2g006790 | 82.584 | 534 | 67 | 3 | 1 | 533 | 1 | 509 | 0.0 | 905 |
MS.gene002551.t1 | MTR_4g109890 | 56.530 | 536 | 223 | 6 | 1 | 530 | 1 | 532 | 0.0 | 629 |
MS.gene002551.t1 | MTR_2g461670 | 49.745 | 589 | 235 | 7 | 1 | 530 | 1 | 587 | 0.0 | 598 |
MS.gene002551.t1 | MTR_2g027740 | 47.094 | 499 | 256 | 5 | 36 | 533 | 175 | 666 | 4.25e-166 | 486 |
MS.gene002551.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 67 | 532 | 122 | 586 | 7.30e-161 | 470 |
MS.gene002551.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 67 | 532 | 199 | 663 | 4.31e-160 | 471 |
MS.gene002551.t1 | MTR_8g092000 | 48.172 | 465 | 231 | 4 | 70 | 533 | 124 | 579 | 1.43e-157 | 461 |
MS.gene002551.t1 | MTR_7g075840 | 48.498 | 466 | 231 | 5 | 70 | 532 | 203 | 662 | 3.08e-155 | 459 |
MS.gene002551.t1 | MTR_8g033360 | 48.966 | 435 | 209 | 5 | 70 | 498 | 170 | 597 | 6.52e-149 | 444 |
MS.gene002551.t1 | MTR_7g055600 | 48.900 | 409 | 202 | 4 | 128 | 532 | 27 | 432 | 1.37e-139 | 410 |
MS.gene002551.t1 | MTR_7g057530 | 48.900 | 409 | 202 | 4 | 128 | 532 | 27 | 432 | 1.37e-139 | 410 |
MS.gene002551.t1 | MTR_6g016380 | 42.500 | 480 | 253 | 9 | 72 | 532 | 78 | 553 | 9.22e-130 | 389 |
MS.gene002551.t1 | MTR_7g012370 | 42.569 | 397 | 198 | 8 | 149 | 521 | 134 | 524 | 3.44e-112 | 344 |
MS.gene002551.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 149 | 532 | 9 | 410 | 2.05e-110 | 335 |
MS.gene002551.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 149 | 532 | 138 | 539 | 1.01e-108 | 335 |
MS.gene002551.t1 | MTR_6g013840 | 43.735 | 407 | 199 | 8 | 149 | 531 | 129 | 529 | 3.04e-106 | 328 |
MS.gene002551.t1 | MTR_7g096160 | 38.178 | 461 | 252 | 8 | 77 | 533 | 222 | 653 | 1.64e-104 | 327 |
MS.gene002551.t1 | MTR_4g133570 | 40.204 | 393 | 215 | 7 | 158 | 531 | 70 | 461 | 3.27e-102 | 315 |
MS.gene002551.t1 | MTR_3g452360 | 37.717 | 403 | 236 | 6 | 141 | 530 | 126 | 526 | 1.53e-94 | 298 |
MS.gene002551.t1 | MTR_3g452360 | 38.786 | 379 | 217 | 6 | 165 | 530 | 1 | 377 | 8.05e-94 | 291 |
MS.gene002551.t1 | MTR_1g070490 | 37.284 | 464 | 254 | 10 | 75 | 532 | 165 | 597 | 2.07e-87 | 282 |
MS.gene002551.t1 | MTR_7g012370 | 40.764 | 314 | 159 | 6 | 149 | 441 | 134 | 441 | 2.18e-78 | 253 |
MS.gene002551.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 118 | 562 | 1.32e-57 | 201 |
MS.gene002551.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 158 | 602 | 1.86e-57 | 202 |
MS.gene002551.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 178 | 622 | 2.94e-57 | 202 |
MS.gene002551.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 178 | 622 | 3.16e-57 | 201 |
MS.gene002551.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 198 | 642 | 4.97e-57 | 201 |
MS.gene002551.t1 | MTR_7g074680 | 29.607 | 483 | 296 | 11 | 72 | 531 | 198 | 659 | 1.24e-55 | 198 |
MS.gene002551.t1 | MTR_4g133942 | 50.746 | 201 | 68 | 4 | 337 | 533 | 160 | 333 | 5.75e-54 | 186 |
MS.gene002551.t1 | MTR_3g092310 | 33.182 | 220 | 137 | 6 | 315 | 525 | 117 | 335 | 4.84e-25 | 106 |
MS.gene002551.t1 | MTR_7g109210 | 33.846 | 195 | 120 | 5 | 339 | 524 | 159 | 353 | 3.11e-24 | 104 |
MS.gene002551.t1 | MTR_7g094230 | 33.143 | 175 | 111 | 4 | 339 | 507 | 151 | 325 | 1.88e-22 | 99.4 |
MS.gene002551.t1 | MTR_5g036580 | 26.452 | 310 | 186 | 11 | 224 | 519 | 75 | 356 | 2.09e-22 | 99.8 |
MS.gene002551.t1 | MTR_6g008900 | 31.401 | 207 | 124 | 7 | 339 | 527 | 165 | 371 | 1.52e-21 | 97.1 |
MS.gene002551.t1 | MTR_4g071620 | 31.401 | 207 | 124 | 7 | 339 | 527 | 165 | 371 | 1.52e-21 | 97.1 |
MS.gene002551.t1 | MTR_4g118030 | 29.907 | 214 | 138 | 8 | 315 | 520 | 122 | 331 | 8.91e-21 | 94.4 |
MS.gene002551.t1 | MTR_8g078240 | 32.796 | 186 | 116 | 5 | 339 | 515 | 142 | 327 | 2.59e-20 | 92.8 |
MS.gene002551.t1 | MTR_3g111600 | 31.522 | 184 | 119 | 5 | 339 | 515 | 80 | 263 | 3.87e-19 | 88.2 |
MS.gene002551.t1 | MTR_5g019220 | 30.660 | 212 | 139 | 6 | 311 | 515 | 139 | 349 | 2.89e-18 | 87.0 |
MS.gene002551.t1 | MTR_1g021855 | 31.892 | 185 | 118 | 5 | 339 | 515 | 165 | 349 | 4.89e-18 | 86.3 |
MS.gene002551.t1 | MTR_1g089820 | 30.151 | 199 | 132 | 5 | 315 | 507 | 131 | 328 | 1.32e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002551.t1 | AT2G20810 | 80.037 | 536 | 104 | 2 | 1 | 533 | 1 | 536 | 0.0 | 879 |
MS.gene002551.t1 | AT1G18580 | 55.410 | 536 | 231 | 5 | 1 | 530 | 1 | 534 | 0.0 | 604 |
MS.gene002551.t1 | AT5G47780 | 48.511 | 470 | 233 | 4 | 65 | 532 | 152 | 614 | 5.56e-166 | 484 |
MS.gene002551.t1 | AT3G61130 | 47.854 | 466 | 235 | 4 | 70 | 533 | 213 | 672 | 8.99e-165 | 483 |
MS.gene002551.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 67 | 533 | 210 | 679 | 8.46e-158 | 466 |
MS.gene002551.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 67 | 533 | 206 | 675 | 1.70e-157 | 465 |
MS.gene002551.t1 | AT3G25140 | 51.289 | 388 | 183 | 3 | 149 | 532 | 172 | 557 | 1.27e-147 | 436 |
MS.gene002551.t1 | AT2G46480 | 45.299 | 468 | 239 | 6 | 70 | 530 | 79 | 536 | 2.89e-141 | 419 |
MS.gene002551.t1 | AT2G46480 | 45.299 | 468 | 239 | 6 | 70 | 530 | 92 | 549 | 8.81e-141 | 418 |
MS.gene002551.t1 | AT3G02350 | 45.000 | 480 | 241 | 8 | 72 | 532 | 84 | 559 | 9.88e-131 | 392 |
MS.gene002551.t1 | AT2G46480 | 42.094 | 468 | 229 | 7 | 70 | 530 | 79 | 511 | 4.22e-125 | 376 |
MS.gene002551.t1 | AT2G46480 | 42.094 | 468 | 229 | 7 | 70 | 530 | 92 | 524 | 7.09e-125 | 376 |
MS.gene002551.t1 | AT3G01040 | 40.000 | 455 | 240 | 9 | 104 | 531 | 81 | 529 | 1.57e-113 | 347 |
MS.gene002551.t1 | AT3G01040 | 40.000 | 455 | 240 | 9 | 104 | 531 | 81 | 529 | 1.57e-113 | 347 |
MS.gene002551.t1 | AT2G30575 | 36.419 | 497 | 276 | 8 | 41 | 533 | 149 | 609 | 2.63e-109 | 338 |
MS.gene002551.t1 | AT5G15470 | 42.157 | 408 | 206 | 8 | 148 | 531 | 128 | 529 | 3.72e-109 | 336 |
MS.gene002551.t1 | AT5G54690 | 38.806 | 402 | 226 | 8 | 150 | 532 | 132 | 532 | 2.32e-106 | 328 |
MS.gene002551.t1 | AT1G06780 | 37.525 | 493 | 269 | 9 | 45 | 533 | 131 | 588 | 5.56e-106 | 329 |
MS.gene002551.t1 | AT1G06780 | 37.525 | 493 | 269 | 9 | 45 | 533 | 144 | 601 | 1.41e-105 | 328 |
MS.gene002551.t1 | AT3G01040 | 37.363 | 455 | 219 | 10 | 104 | 531 | 81 | 496 | 5.12e-98 | 306 |
MS.gene002551.t1 | AT3G58790 | 38.875 | 391 | 218 | 8 | 159 | 530 | 16 | 404 | 5.77e-89 | 280 |
MS.gene002551.t1 | AT3G58790 | 37.232 | 419 | 235 | 9 | 131 | 530 | 127 | 536 | 1.51e-87 | 280 |
MS.gene002551.t1 | AT2G38650 | 32.409 | 469 | 283 | 9 | 72 | 533 | 177 | 618 | 3.88e-65 | 223 |
MS.gene002551.t1 | AT2G38650 | 32.409 | 469 | 283 | 9 | 72 | 533 | 177 | 618 | 3.88e-65 | 223 |
MS.gene002551.t1 | AT2G38650 | 31.565 | 377 | 227 | 8 | 72 | 443 | 177 | 527 | 2.79e-44 | 164 |
MS.gene002551.t1 | AT1G70090 | 26.498 | 317 | 191 | 11 | 224 | 526 | 78 | 366 | 1.41e-24 | 106 |
MS.gene002551.t1 | AT1G70090 | 26.498 | 317 | 191 | 11 | 224 | 526 | 78 | 366 | 1.41e-24 | 106 |
MS.gene002551.t1 | AT1G24170 | 25.552 | 317 | 194 | 11 | 224 | 526 | 81 | 369 | 5.47e-21 | 95.5 |
MS.gene002551.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.23e-20 | 94.0 |
MS.gene002551.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.23e-20 | 94.0 |
MS.gene002551.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.23e-20 | 94.0 |
MS.gene002551.t1 | AT3G62660 | 26.962 | 293 | 171 | 9 | 242 | 524 | 99 | 358 | 1.58e-20 | 93.6 |
MS.gene002551.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 222 | 525 | 75 | 360 | 2.79e-20 | 93.2 |
MS.gene002551.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 222 | 525 | 75 | 360 | 2.79e-20 | 93.2 |
MS.gene002551.t1 | AT3G28340 | 25.965 | 285 | 174 | 10 | 239 | 515 | 84 | 339 | 4.35e-20 | 92.4 |
MS.gene002551.t1 | AT1G19300 | 31.522 | 184 | 119 | 5 | 339 | 515 | 150 | 333 | 7.22e-20 | 91.7 |
MS.gene002551.t1 | AT3G06260 | 29.787 | 188 | 124 | 5 | 339 | 520 | 150 | 335 | 1.46e-19 | 90.9 |
MS.gene002551.t1 | AT1G13250 | 32.787 | 183 | 117 | 4 | 339 | 515 | 144 | 326 | 3.96e-18 | 86.3 |
MS.gene002551.t1 | AT3G50760 | 30.688 | 189 | 121 | 5 | 337 | 515 | 134 | 322 | 5.73e-17 | 82.8 |
Find 106 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGATTCTCTAGTTGTTAA+AGG | 0.166835 | 2.1:+69941228 | None:intergenic |
TTAAGCATGGACAGATATTT+AGG | 0.176518 | 2.1:+69940601 | None:intergenic |
CTTTCCACCATCACTGTTTC+CGG | 0.176992 | 2.1:+69940645 | None:intergenic |
GATTTGAATGGGAATGTTAA+TGG | 0.254551 | 2.1:-69940472 | MS.gene002551:CDS |
ACATCTCTTCGGTAATATTA+AGG | 0.257268 | 2.1:+69941415 | None:intergenic |
CACTTAGTTCCCAAGCAAAT+TGG | 0.261830 | 2.1:+69941304 | None:intergenic |
GATGCATGCGGATGGGCATT+TGG | 0.261833 | 2.1:-69940361 | MS.gene002551:CDS |
GAGAATAGTTCAAGTATTTA+TGG | 0.277457 | 2.1:+69940413 | None:intergenic |
GGATCCATCGTGGCATGTAC+TGG | 0.298222 | 2.1:-69940188 | MS.gene002551:CDS |
CCTGAAGAAGATCGTGTTCC+TGG | 0.305211 | 2.1:-69940542 | MS.gene002551:CDS |
GCAAGTGGAGATGAAGATTA+AGG | 0.308264 | 2.1:-69940950 | MS.gene002551:CDS |
CCAAACCTTGGTTGAAGATT+GGG | 0.323300 | 2.1:-69940096 | MS.gene002551:CDS |
TCGTGGCATGTACTGGGTTT+TGG | 0.330769 | 2.1:-69940181 | MS.gene002551:CDS |
CCAGGAACACGATCTTCTTC+AGG | 0.343617 | 2.1:+69940542 | None:intergenic |
AGTGAAAAGAGTTCAAAATA+TGG | 0.351614 | 2.1:-69941081 | MS.gene002551:CDS |
CCCAATCTTCAACCAAGGTT+TGG | 0.377804 | 2.1:+69940096 | None:intergenic |
TCCAAACCTTGGTTGAAGAT+TGG | 0.380861 | 2.1:-69940097 | MS.gene002551:CDS |
TAAGCATGGACAGATATTTA+GGG | 0.391103 | 2.1:+69940602 | None:intergenic |
TCATCTGTTCTTCAAGAGCT+TGG | 0.400022 | 2.1:+69941112 | None:intergenic |
ATGCATGCGGATGGGCATTT+GGG | 0.402621 | 2.1:-69940360 | MS.gene002551:CDS |
AAAGTTGCATTGCTGCAATA+AGG | 0.409846 | 2.1:+69940024 | None:intergenic |
TCATAGTTGCACTGTCATAA+TGG | 0.413392 | 2.1:+69941157 | None:intergenic |
TTAGGGTTACGAAACTTGAT+AGG | 0.418201 | 2.1:+69940619 | None:intergenic |
GCTTATACTGTCTGGGTGTC+CGG | 0.419318 | 2.1:-69941029 | MS.gene002551:CDS |
TATCTGATCATTAAGTTGTC+TGG | 0.431525 | 2.1:+69941374 | None:intergenic |
TAACTGGCATCTACCACTAT+TGG | 0.432849 | 2.1:-69940297 | MS.gene002551:CDS |
CACCCCACGAAAGTCATTCA+TGG | 0.437582 | 2.1:+69940771 | None:intergenic |
TTACAACAAAAGCTTTAGCT+AGG | 0.438992 | 2.1:+69941349 | None:intergenic |
GTAACAATCTCCAATTTGCT+TGG | 0.440025 | 2.1:-69941314 | MS.gene002551:CDS |
AGACAGTGCTATCCGAGATA+TGG | 0.444268 | 2.1:-69941208 | MS.gene002551:CDS |
TGAACCATTCAGTTGTCAAC+CGG | 0.445715 | 2.1:+69941010 | None:intergenic |
GGGGCAGTACTGCACTTCAA+TGG | 0.454088 | 2.1:-69940124 | MS.gene002551:CDS |
AATGCCCATCCGCATGCATC+GGG | 0.461211 | 2.1:+69940364 | None:intergenic |
TAACAATCTCCAATTTGCTT+GGG | 0.461680 | 2.1:-69941313 | MS.gene002551:CDS |
CCATAAAATGTTAATAATCC+AGG | 0.463302 | 2.1:+69940226 | None:intergenic |
TTATGGACTAACAGAACCCT+TGG | 0.463314 | 2.1:-69940209 | MS.gene002551:CDS |
AAACTCGGCACTTTGCCACC+TGG | 0.467528 | 2.1:-69940244 | MS.gene002551:CDS |
TCAAAATGAGCTCTTATAAG+AGG | 0.468247 | 2.1:+69940388 | None:intergenic |
AAAAGAAATTGAAGGACAAA+AGG | 0.469978 | 2.1:-69940972 | MS.gene002551:CDS |
GGGCAGTACTGCACTTCAAT+GGG | 0.478112 | 2.1:-69940123 | MS.gene002551:CDS |
AACACGATCTTCTTCAGGGC+AGG | 0.482498 | 2.1:+69940547 | None:intergenic |
AATGCCCACCACAATGCATC+AGG | 0.482629 | 2.1:+69942587 | None:intergenic |
TCAGGAACCCTTCTCCGTAC+TGG | 0.487778 | 2.1:+69942605 | None:intergenic |
CATAATGGAGCTGCTGAGCC+TGG | 0.490002 | 2.1:+69941172 | None:intergenic |
GATCCATCGTGGCATGTACT+GGG | 0.492139 | 2.1:-69940187 | MS.gene002551:CDS |
TTCGAAGGCCAGTACGGAGA+AGG | 0.494054 | 2.1:-69942613 | MS.gene002551:CDS |
AGACTCAATTTGAGTCCCTC+TGG | 0.504318 | 2.1:+69942526 | None:intergenic |
AAATGCCCATCCGCATGCAT+CGG | 0.506827 | 2.1:+69940363 | None:intergenic |
TGTCCATGCTTAACCACTTG+AGG | 0.508743 | 2.1:-69940591 | MS.gene002551:CDS |
GAACCACGACGTCATCGTCC+AGG | 0.514466 | 2.1:+69940524 | None:intergenic |
CGATGACGTCGTGGTTCAGA+AGG | 0.515338 | 2.1:-69940518 | MS.gene002551:CDS |
GTCGGAACTTAACATCTCTT+CGG | 0.519106 | 2.1:+69941404 | None:intergenic |
CAATTTGCAAAAGAAATTGA+AGG | 0.524075 | 2.1:-69940980 | MS.gene002551:CDS |
TTGCCATGAATGACTTTCGT+GGG | 0.524242 | 2.1:-69940774 | MS.gene002551:CDS |
TTGATCCCGATGCATGCGGA+TGG | 0.524271 | 2.1:-69940369 | MS.gene002551:CDS |
CAGGAACACGATCTTCTTCA+GGG | 0.526754 | 2.1:+69940543 | None:intergenic |
TCAATCCCAATCTTCAACCA+AGG | 0.528594 | 2.1:+69940091 | None:intergenic |
AATAAATTATGCTTCGATGA+AGG | 0.529408 | 2.1:-69940803 | MS.gene002551:CDS |
AGAACACACAAAAGTGGTAA+AGG | 0.533513 | 2.1:+69940920 | None:intergenic |
GATCCTCAGTTGATAGAAAG+AGG | 0.537753 | 2.1:-69940145 | MS.gene002551:CDS |
TATGGCTTTATTGTTATACC+AGG | 0.538758 | 2.1:-69941190 | MS.gene002551:CDS |
TACATGCCACGATGGATCCA+AGG | 0.541821 | 2.1:+69940192 | None:intergenic |
TACAACAAAAGCTTTAGCTA+GGG | 0.546643 | 2.1:+69941350 | None:intergenic |
GTCTAGACCGCCTTTGTCCA+AGG | 0.549937 | 2.1:-69942507 | MS.gene002551:intron |
TCTTGAAGTTGCTTAAGCAC+AGG | 0.555450 | 2.1:+69940694 | None:intergenic |
TCGAAGGCCAGTACGGAGAA+GGG | 0.558622 | 2.1:-69942612 | MS.gene002551:CDS |
AGAAGTATGAAGACTTCTCA+TGG | 0.559312 | 2.1:-69940735 | MS.gene002551:CDS |
GCAATAAATACCTTGGACAA+AGG | 0.564738 | 2.1:+69942497 | None:intergenic |
TGGCATCTACCACTATTGGC+AGG | 0.567517 | 2.1:-69940293 | MS.gene002551:CDS |
ATAACAATAAAGCCATATCT+CGG | 0.568216 | 2.1:+69941196 | None:intergenic |
TGATCCCGATGCATGCGGAT+GGG | 0.570203 | 2.1:-69940368 | MS.gene002551:CDS |
TATCAGAGAACACACAAAAG+TGG | 0.570397 | 2.1:+69940914 | None:intergenic |
TCAATGGGAACTCCAAACCT+TGG | 0.574241 | 2.1:-69940108 | MS.gene002551:CDS |
AAACCTCAAGTGGTTAAGCA+TGG | 0.583737 | 2.1:+69940588 | None:intergenic |
ATCCTCAGTTGATAGAAAGA+GGG | 0.590332 | 2.1:-69940144 | MS.gene002551:CDS |
AGAGAAGAATCTGTGAATTG+CGG | 0.590485 | 2.1:+69941274 | None:intergenic |
CAGGGATATAAAACCTCAAG+TGG | 0.591983 | 2.1:+69940578 | None:intergenic |
GGCAGGAAAAGAATGTAGAT+CGG | 0.596579 | 2.1:-69940276 | MS.gene002551:CDS |
TTCAAAATATGGACAAATAG+CGG | 0.597495 | 2.1:-69941070 | MS.gene002551:CDS |
TTCTCTCAAATGCTGCCACT+AGG | 0.598229 | 2.1:-69941257 | MS.gene002551:CDS |
AGAATGTAGATCGGACATTG+TGG | 0.600112 | 2.1:-69940267 | MS.gene002551:CDS |
GGTTCCTGATGCATTGTGGT+GGG | 0.606322 | 2.1:-69942591 | MS.gene002551:CDS |
TTATCTATATTCTCACCAGA+GGG | 0.611948 | 2.1:-69942541 | MS.gene002551:CDS |
ATTGAAGGACAAAAGGCAAG+TGG | 0.619661 | 2.1:-69940965 | MS.gene002551:CDS |
TGACTTTCGTGGGGTGACTG+TGG | 0.624497 | 2.1:-69940764 | MS.gene002551:CDS |
GATCGGACATTGTGGAAACT+CGG | 0.627650 | 2.1:-69940259 | MS.gene002551:CDS |
ACATGCCACGATGGATCCAA+GGG | 0.630341 | 2.1:+69940193 | None:intergenic |
TTTGCCATGAATGACTTTCG+TGG | 0.634111 | 2.1:-69940775 | MS.gene002551:CDS |
TTTATCTATATTCTCACCAG+AGG | 0.634229 | 2.1:-69942542 | MS.gene002551:CDS |
AAGTTGTCTGGTCACCGAGT+CGG | 0.637832 | 2.1:+69941386 | None:intergenic |
GGGTTCCTGATGCATTGTGG+TGG | 0.643605 | 2.1:-69942592 | MS.gene002551:CDS |
TCCTCAGTTGATAGAAAGAG+GGG | 0.647000 | 2.1:-69940143 | MS.gene002551:CDS |
CATCATTGCAACTTCAGTCG+TGG | 0.652388 | 2.1:-69940890 | MS.gene002551:CDS |
ATAAATACCTTGGACAAAGG+CGG | 0.654401 | 2.1:+69942500 | None:intergenic |
ATTATGCTTCGATGAAGGCG+TGG | 0.658411 | 2.1:-69940798 | MS.gene002551:CDS |
TGCCATGAATGACTTTCGTG+GGG | 0.659273 | 2.1:-69940773 | MS.gene002551:CDS |
TGGAGCTGTTGAGACATGCA+TGG | 0.666652 | 2.1:-69940452 | MS.gene002551:CDS |
GCCCCTCTTTCTATCAACTG+AGG | 0.668195 | 2.1:+69940142 | None:intergenic |
TAAAATGTTAATAATCCAGG+TGG | 0.669793 | 2.1:+69940229 | None:intergenic |
GTGTCCGGTTGACAACTGAA+TGG | 0.675940 | 2.1:-69941014 | MS.gene002551:CDS |
GAAGGGTTCCTGATGCATTG+TGG | 0.677895 | 2.1:-69942595 | MS.gene002551:CDS |
AGAGATGTTAAGTTCCGACT+CGG | 0.681244 | 2.1:-69941400 | MS.gene002551:CDS |
GTTCCTGGACGATGACGTCG+TGG | 0.688675 | 2.1:-69940527 | MS.gene002551:CDS |
AAACCCAGTACATGCCACGA+TGG | 0.692978 | 2.1:+69940184 | None:intergenic |
TGTTAAAGGAGAACGCCTAG+TGG | 0.708696 | 2.1:+69941242 | None:intergenic |
CAGAACCCTTGGATCCATCG+TGG | 0.734059 | 2.1:-69940198 | MS.gene002551:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAAGAAAAATTATATTTA+GGG | + | chr2.1:69940968-69940987 | None:intergenic | 10.0% |
!! | ATTATATCTTCATTATTATT+GGG | - | chr2.1:69941113-69941132 | MS.gene002551:CDS | 10.0% |
!! | TATGAAGAAAAATTATATTT+AGG | + | chr2.1:69940969-69940988 | None:intergenic | 10.0% |
!! | ATCATAAATGAAAAATGAAA+AGG | + | chr2.1:69940466-69940485 | None:intergenic | 15.0% |
!! | CATAATTTCATTTATAGTAT+TGG | - | chr2.1:69940985-69941004 | MS.gene002551:CDS | 15.0% |
!! | CATTATATCTTCATTATTAT+TGG | - | chr2.1:69941112-69941131 | MS.gene002551:CDS | 15.0% |
!! | TATGATTGAATAATCTTTAT+TGG | - | chr2.1:69940480-69940499 | MS.gene002551:CDS | 15.0% |
!! | TTATATCTTCATTATTATTG+GGG | - | chr2.1:69941114-69941133 | MS.gene002551:CDS | 15.0% |
!!! | TTTTTTCAATTGATTTGAAT+GGG | - | chr2.1:69942170-69942189 | MS.gene002551:intron | 15.0% |
!! | AATTTCATTTCTATTTGGAA+GGG | - | chr2.1:69940226-69940245 | MS.gene002551:CDS | 20.0% |
!! | GTAGTAATTTCATTTCTATT+TGG | - | chr2.1:69940221-69940240 | MS.gene002551:CDS | 20.0% |
!! | TAATTTCATTTCTATTTGGA+AGG | - | chr2.1:69940225-69940244 | MS.gene002551:CDS | 20.0% |
!! | TACATTAGAATATTTCCAAA+GGG | - | chr2.1:69940548-69940567 | MS.gene002551:CDS | 20.0% |
!! | TAGAAATGAAATTACTACAT+AGG | + | chr2.1:69940219-69940238 | None:intergenic | 20.0% |
!! | TATATCTTCATTATTATTGG+GGG | - | chr2.1:69941115-69941134 | MS.gene002551:CDS | 20.0% |
!! | TTACAAAAATGATAGGATTA+TGG | - | chr2.1:69941211-69941230 | MS.gene002551:CDS | 20.0% |
!!! | AATATCAATCAGAGTTTTAA+TGG | - | chr2.1:69940574-69940593 | MS.gene002551:CDS | 20.0% |
!!! | AGTTTTAATGGCTAATAATA+TGG | - | chr2.1:69940586-69940605 | MS.gene002551:CDS | 20.0% |
!!! | ATTAGTTTTTCTCTATAGTA+CGG | + | chr2.1:69940942-69940961 | None:intergenic | 20.0% |
!!! | CTTTTTTCAATTGATTTGAA+TGG | - | chr2.1:69942169-69942188 | MS.gene002551:intron | 20.0% |
! | AAAAATGATAGGATTATGGA+AGG | - | chr2.1:69941215-69941234 | MS.gene002551:CDS | 25.0% |
! | AAAAGAAATTGAAGGACAAA+AGG | - | chr2.1:69941681-69941700 | MS.gene002551:intron | 25.0% |
! | AAGAAGTTATTAGCTAAACA+AGG | + | chr2.1:69941170-69941189 | None:intergenic | 25.0% |
! | AATAAATTATGCTTCGATGA+AGG | - | chr2.1:69941850-69941869 | MS.gene002551:intron | 25.0% |
! | AGAGAACTTACAAAAATGAT+AGG | - | chr2.1:69941204-69941223 | MS.gene002551:CDS | 25.0% |
! | AGTGAAAAGAGTTCAAAATA+TGG | - | chr2.1:69941572-69941591 | MS.gene002551:intron | 25.0% |
! | ATAACAATAAAGCCATATCT+CGG | + | chr2.1:69941460-69941479 | None:intergenic | 25.0% |
! | CAATTTGCAAAAGAAATTGA+AGG | - | chr2.1:69941673-69941692 | MS.gene002551:intron | 25.0% |
! | CCATAAAATGTTAATAATCC+AGG | + | chr2.1:69942430-69942449 | None:intergenic | 25.0% |
! | CTACATTAGAATATTTCCAA+AGG | - | chr2.1:69940547-69940566 | MS.gene002551:CDS | 25.0% |
! | GAGAATAGTTCAAGTATTTA+TGG | + | chr2.1:69942243-69942262 | None:intergenic | 25.0% |
! | TAAAATGTTAATAATCCAGG+TGG | + | chr2.1:69942427-69942446 | None:intergenic | 25.0% |
! | TTACAATCTCAACATTTAGT+TGG | - | chr2.1:69940326-69940345 | MS.gene002551:CDS | 25.0% |
! | TTCAAAATATGGACAAATAG+CGG | - | chr2.1:69941583-69941602 | MS.gene002551:intron | 25.0% |
!! | AAATTCTAAAAATCCCAACA+TGG | - | chr2.1:69941802-69941821 | MS.gene002551:intron | 25.0% |
!! | AATCAATATGTTTTTCCCAT+AGG | + | chr2.1:69942600-69942619 | None:intergenic | 25.0% |
!! | ATCAATATGTTTTTCCCATA+GGG | + | chr2.1:69942599-69942618 | None:intergenic | 25.0% |
!! | ATTGGTAAATGTTTTGCAAT+AGG | - | chr2.1:69940856-69940875 | MS.gene002551:CDS | 25.0% |
!! | CAAGTTTTTAATACATCACA+TGG | - | chr2.1:69940792-69940811 | MS.gene002551:CDS | 25.0% |
!! | CCTGGATTATTAACATTTTA+TGG | - | chr2.1:69942427-69942446 | MS.gene002551:intron | 25.0% |
!! | CTTAAACTTGCTTAAGTAAT+TGG | - | chr2.1:69941043-69941062 | MS.gene002551:CDS | 25.0% |
!! | TCAATTTCTTTTGCAAATTG+AGG | + | chr2.1:69941673-69941692 | None:intergenic | 25.0% |
!!! | ATGTTTTTGATTTGGTTGAA+TGG | - | chr2.1:69942320-69942339 | MS.gene002551:intron | 25.0% |
!!! | TTGGAAATTCATTTTGTTTC+CGG | - | chr2.1:69940407-69940426 | MS.gene002551:CDS | 25.0% |
AAAACTTGCAAAGTGTAAGT+TGG | + | chr2.1:69940780-69940799 | None:intergenic | 30.0% | |
AAGATGAAAAACAACCATGT+TGG | + | chr2.1:69941819-69941838 | None:intergenic | 30.0% | |
ACATCTCTTCGGTAATATTA+AGG | + | chr2.1:69941241-69941260 | None:intergenic | 30.0% | |
AGATGAAAAACAACCATGTT+GGG | + | chr2.1:69941818-69941837 | None:intergenic | 30.0% | |
CTGATTGATATTATACCCTT+TGG | + | chr2.1:69940566-69940585 | None:intergenic | 30.0% | |
CTTTATTGGATAGAAACAAC+TGG | - | chr2.1:69940494-69940513 | MS.gene002551:CDS | 30.0% | |
GATTTGAATGGGAATGTTAA+TGG | - | chr2.1:69942181-69942200 | MS.gene002551:intron | 30.0% | |
GGAAAAAGCAATAAATACCT+TGG | + | chr2.1:69940166-69940185 | None:intergenic | 30.0% | |
TAAGCATGGACAGATATTTA+GGG | + | chr2.1:69942054-69942073 | None:intergenic | 30.0% | |
TCAAAATGAGCTCTTATAAG+AGG | + | chr2.1:69942268-69942287 | None:intergenic | 30.0% | |
TCAACTCAATAAGTTAGGAT+AGG | - | chr2.1:69940288-69940307 | MS.gene002551:CDS | 30.0% | |
TCAATAAGTTAGGATAGGAT+AGG | - | chr2.1:69940293-69940312 | MS.gene002551:CDS | 30.0% | |
TCACTTCAACTCAATAAGTT+AGG | - | chr2.1:69940283-69940302 | MS.gene002551:CDS | 30.0% | |
TCTGATTCTCTAGTTGTTAA+AGG | + | chr2.1:69941428-69941447 | None:intergenic | 30.0% | |
TTAAGCATGGACAGATATTT+AGG | + | chr2.1:69942055-69942074 | None:intergenic | 30.0% | |
TTATCTATATTCTCACCAGA+GGG | - | chr2.1:69940112-69940131 | MS.gene002551:CDS | 30.0% | |
TTTATCTATATTCTCACCAG+AGG | - | chr2.1:69940111-69940130 | MS.gene002551:CDS | 30.0% | |
! | CAATTATATGAAGAGCGTAT+TGG | - | chr2.1:69940838-69940857 | MS.gene002551:CDS | 30.0% |
! | TAACAATCTCCAATTTGCTT+GGG | - | chr2.1:69941340-69941359 | MS.gene002551:CDS | 30.0% |
! | TACAACAAAAGCTTTAGCTA+GGG | + | chr2.1:69941306-69941325 | None:intergenic | 30.0% |
! | TATCTGATCATTAAGTTGTC+TGG | + | chr2.1:69941282-69941301 | None:intergenic | 30.0% |
! | TCAATATGTTTTTCCCATAG+GGG | + | chr2.1:69942598-69942617 | None:intergenic | 30.0% |
! | TTACAACAAAAGCTTTAGCT+AGG | + | chr2.1:69941307-69941326 | None:intergenic | 30.0% |
!! | AAATTTTTGAGCAAGAGATC+TGG | + | chr2.1:69940187-69940206 | None:intergenic | 30.0% |
!! | ATACAAAGCTACTACTTTTC+CGG | - | chr2.1:69941989-69942008 | MS.gene002551:intron | 30.0% |
!! | ATGTTTTAAATCCCTTTTGC+GGG | - | chr2.1:69940633-69940652 | MS.gene002551:CDS | 30.0% |
!! | GATGTTTTAAATCCCTTTTG+CGG | - | chr2.1:69940632-69940651 | MS.gene002551:CDS | 30.0% |
!! | TATGGCTTTATTGTTATACC+AGG | - | chr2.1:69941463-69941482 | MS.gene002551:intron | 30.0% |
!! | TGGGATGAATGTTTTTGATT+TGG | - | chr2.1:69942312-69942331 | MS.gene002551:intron | 30.0% |
!!! | TTTTTGATTTGGTTGAATGG+AGG | - | chr2.1:69942323-69942342 | MS.gene002551:intron | 30.0% |
AAAGTTGCATTGCTGCAATA+AGG | + | chr2.1:69942632-69942651 | None:intergenic | 35.0% | |
ACCAAAAAGCTTATACTGTC+TGG | - | chr2.1:69941616-69941635 | MS.gene002551:intron | 35.0% | |
AGAACACACAAAAGTGGTAA+AGG | + | chr2.1:69941736-69941755 | None:intergenic | 35.0% | |
AGAGAAGAATCTGTGAATTG+CGG | + | chr2.1:69941382-69941401 | None:intergenic | 35.0% | |
ATAAATACCTTGGACAAAGG+CGG | + | chr2.1:69940156-69940175 | None:intergenic | 35.0% | |
ATAGTATGCTGAGATGATGT+TGG | - | chr2.1:69940388-69940407 | MS.gene002551:CDS | 35.0% | |
ATATGTAGTCAACTAGCACA+TGG | + | chr2.1:69940442-69940461 | None:intergenic | 35.0% | |
CCAAAAAGCTTATACTGTCT+GGG | - | chr2.1:69941617-69941636 | MS.gene002551:intron | 35.0% | |
GCAATAAATACCTTGGACAA+AGG | + | chr2.1:69940159-69940178 | None:intergenic | 35.0% | |
TAGCACATGGTACATAATTC+CGG | + | chr2.1:69940429-69940448 | None:intergenic | 35.0% | |
TATCAGAGAACACACAAAAG+TGG | + | chr2.1:69941742-69941761 | None:intergenic | 35.0% | |
TCATAGTTGCACTGTCATAA+TGG | + | chr2.1:69941499-69941518 | None:intergenic | 35.0% | |
TCATTATTATTGGGGGATAG+AGG | - | chr2.1:69941122-69941141 | MS.gene002551:CDS | 35.0% | |
TGAAAAATACAAGCCCCTAT+GGG | - | chr2.1:69942582-69942601 | MS.gene002551:CDS | 35.0% | |
TGGAGGAAAAAGAATGTAAC+TGG | - | chr2.1:69942340-69942359 | MS.gene002551:intron | 35.0% | |
TTAGGGTTACGAAACTTGAT+AGG | + | chr2.1:69942037-69942056 | None:intergenic | 35.0% | |
TTGAAAAATACAAGCCCCTA+TGG | - | chr2.1:69942581-69942600 | MS.gene002551:CDS | 35.0% | |
! | AGAAGTATGAAGACTTCTCA+TGG | - | chr2.1:69941918-69941937 | MS.gene002551:intron | 35.0% |
! | GGGATTTAAAACATCTGATC+TGG | + | chr2.1:69940627-69940646 | None:intergenic | 35.0% |
! | GTAACAATCTCCAATTTGCT+TGG | - | chr2.1:69941339-69941358 | MS.gene002551:CDS | 35.0% |
! | TAATTGGAACATAGCTTGCA+TGG | - | chr2.1:69941059-69941078 | MS.gene002551:CDS | 35.0% |
!! | ATCCTCAGTTGATAGAAAGA+GGG | - | chr2.1:69942509-69942528 | MS.gene002551:CDS | 35.0% |
!! | TGTTTTAAATCCCTTTTGCG+GGG | - | chr2.1:69940634-69940653 | MS.gene002551:CDS | 35.0% |
AAACCTCAAGTGGTTAAGCA+TGG | + | chr2.1:69942068-69942087 | None:intergenic | 40.0% | |
ACTTGCAACAAGAGAACACA+TGG | + | chr2.1:69940898-69940917 | None:intergenic | 40.0% | |
AGAATGTAGATCGGACATTG+TGG | - | chr2.1:69942386-69942405 | MS.gene002551:intron | 40.0% | |
AGAGATGTTAAGTTCCGACT+CGG | - | chr2.1:69941253-69941272 | MS.gene002551:CDS | 40.0% | |
ATTGAAGGACAAAAGGCAAG+TGG | - | chr2.1:69941688-69941707 | MS.gene002551:intron | 40.0% | |
CACTTAGTTCCCAAGCAAAT+TGG | + | chr2.1:69941352-69941371 | None:intergenic | 40.0% | |
CAGGGATATAAAACCTCAAG+TGG | + | chr2.1:69942078-69942097 | None:intergenic | 40.0% | |
CCAAACCTTGGTTGAAGATT+GGG | - | chr2.1:69942557-69942576 | MS.gene002551:CDS | 40.0% | |
CTCTTGTTGCAAGTTATGTC+AGG | - | chr2.1:69940904-69940923 | MS.gene002551:CDS | 40.0% | |
GAAATCGAACCTGAAACCTT+GGG | - | chr2.1:69940718-69940737 | MS.gene002551:CDS | 40.0% | |
GCAAGTGGAGATGAAGATTA+AGG | - | chr2.1:69941703-69941722 | MS.gene002551:intron | 40.0% | |
GGCAGGAAAAGAATGTAGAT+CGG | - | chr2.1:69942377-69942396 | MS.gene002551:intron | 40.0% | |
GTCGGAACTTAACATCTCTT+CGG | + | chr2.1:69941252-69941271 | None:intergenic | 40.0% | |
GTTCATACAAAGCTTTGCTC+TGG | + | chr2.1:69940674-69940693 | None:intergenic | 40.0% | |
TAACTGGCATCTACCACTAT+TGG | - | chr2.1:69942356-69942375 | MS.gene002551:intron | 40.0% | |
TCAATCCCAATCTTCAACCA+AGG | + | chr2.1:69942565-69942584 | None:intergenic | 40.0% | |
TCATCTGTTCTTCAAGAGCT+TGG | + | chr2.1:69941544-69941563 | None:intergenic | 40.0% | |
TCCAAACCTTGGTTGAAGAT+TGG | - | chr2.1:69942556-69942575 | MS.gene002551:CDS | 40.0% | |
TCTTGAAGTTGCTTAAGCAC+AGG | + | chr2.1:69941962-69941981 | None:intergenic | 40.0% | |
TGAACCATTCAGTTGTCAAC+CGG | + | chr2.1:69941646-69941665 | None:intergenic | 40.0% | |
TGTGTGAGATGTGAGTTCAA+TGG | - | chr2.1:69940520-69940539 | MS.gene002551:CDS | 40.0% | |
TTGCCATGAATGACTTTCGT+GGG | - | chr2.1:69941879-69941898 | MS.gene002551:intron | 40.0% | |
TTTGCCATGAATGACTTTCG+TGG | - | chr2.1:69941878-69941897 | MS.gene002551:intron | 40.0% | |
! | CATTCTTTTCCTGCCAATAG+TGG | + | chr2.1:69942372-69942391 | None:intergenic | 40.0% |
! | CCCAGACAGTATAAGCTTTT+TGG | + | chr2.1:69941620-69941639 | None:intergenic | 40.0% |
! | GTAGAGCAACAGATTTTCGA+AGG | - | chr2.1:69940025-69940044 | MS.gene002551:CDS | 40.0% |
! | TACTTTTCCGGAAACAGTGA+TGG | - | chr2.1:69942001-69942020 | MS.gene002551:intron | 40.0% |
! | TTATGGACTAACAGAACCCT+TGG | - | chr2.1:69942444-69942463 | MS.gene002551:intron | 40.0% |
! | TTTTAAATCCCTTTTGCGGG+GGG | - | chr2.1:69940636-69940655 | MS.gene002551:CDS | 40.0% |
!! | AGCTTTGCTCTGGCTTTAAA+TGG | + | chr2.1:69940664-69940683 | None:intergenic | 40.0% |
!! | GATCCTCAGTTGATAGAAAG+AGG | - | chr2.1:69942508-69942527 | MS.gene002551:CDS | 40.0% |
!! | GCTTTGCTCTGGCTTTAAAT+GGG | + | chr2.1:69940663-69940682 | None:intergenic | 40.0% |
!! | GTTTTAAATCCCTTTTGCGG+GGG | - | chr2.1:69940635-69940654 | MS.gene002551:CDS | 40.0% |
!! | TCCTCAGTTGATAGAAAGAG+GGG | - | chr2.1:69942510-69942529 | MS.gene002551:CDS | 40.0% |
AAGATTCCAAGCCAACCACT+AGG | - | chr2.1:69940754-69940773 | MS.gene002551:CDS | 45.0% | |
AGACAGTGCTATCCGAGATA+TGG | - | chr2.1:69941445-69941464 | MS.gene002551:CDS | 45.0% | |
AGACTCAATTTGAGTCCCTC+TGG | + | chr2.1:69940130-69940149 | None:intergenic | 45.0% | |
ATTATGCTTCGATGAAGGCG+TGG | - | chr2.1:69941855-69941874 | MS.gene002551:intron | 45.0% | |
ATTATTGGGGGATAGAGGTG+CGG | - | chr2.1:69941127-69941146 | MS.gene002551:CDS | 45.0% | |
CAGGAACACGATCTTCTTCA+GGG | + | chr2.1:69942113-69942132 | None:intergenic | 45.0% | |
CATCATTGCAACTTCAGTCG+TGG | - | chr2.1:69941763-69941782 | MS.gene002551:intron | 45.0% | |
CCCAATCTTCAACCAAGGTT+TGG | + | chr2.1:69942560-69942579 | None:intergenic | 45.0% | |
CTTTCCACCATCACTGTTTC+CGG | + | chr2.1:69942011-69942030 | None:intergenic | 45.0% | |
GATCGGACATTGTGGAAACT+CGG | - | chr2.1:69942394-69942413 | MS.gene002551:intron | 45.0% | |
GGAAATCGAACCTGAAACCT+TGG | - | chr2.1:69940717-69940736 | MS.gene002551:CDS | 45.0% | |
TCAATGGGAACTCCAAACCT+TGG | - | chr2.1:69942545-69942564 | MS.gene002551:CDS | 45.0% | |
TCAGGGCAGGAAAAACTTCA+GGG | + | chr2.1:69942096-69942115 | None:intergenic | 45.0% | |
TGCCATGAATGACTTTCGTG+GGG | - | chr2.1:69941880-69941899 | MS.gene002551:intron | 45.0% | |
TGTCCATGCTTAACCACTTG+AGG | - | chr2.1:69942062-69942081 | MS.gene002551:intron | 45.0% | |
TGTTAAAGGAGAACGCCTAG+TGG | + | chr2.1:69941414-69941433 | None:intergenic | 45.0% | |
TTCAGGGCAGGAAAAACTTC+AGG | + | chr2.1:69942097-69942116 | None:intergenic | 45.0% | |
TTCTCTCAAATGCTGCCACT+AGG | - | chr2.1:69941396-69941415 | MS.gene002551:CDS | 45.0% | |
! | CAAAGTGTAAGTTGGCCTAG+TGG | + | chr2.1:69940772-69940791 | None:intergenic | 45.0% |
! | CAGATTTTCGAAGGCCAGTA+CGG | - | chr2.1:69940034-69940053 | MS.gene002551:CDS | 45.0% |
! | TTTAAATCCCTTTTGCGGGG+GGG | - | chr2.1:69940637-69940656 | MS.gene002551:CDS | 45.0% |
! | TTTTCCGGAAACAGTGATGG+TGG | - | chr2.1:69942004-69942023 | MS.gene002551:intron | 45.0% |
!! | CATTTTGATCCCGATGCATG+CGG | - | chr2.1:69942280-69942299 | MS.gene002551:intron | 45.0% |
!! | TAGTGGTTGGCTTGGAATCT+TGG | + | chr2.1:69940755-69940774 | None:intergenic | 45.0% |
AAACCCAGTACATGCCACGA+TGG | + | chr2.1:69942472-69942491 | None:intergenic | 50.0% | |
AAATGCCCATCCGCATGCAT+CGG | + | chr2.1:69942293-69942312 | None:intergenic | 50.0% | |
AACACGATCTTCTTCAGGGC+AGG | + | chr2.1:69942109-69942128 | None:intergenic | 50.0% | |
AAGTTGTCTGGTCACCGAGT+CGG | + | chr2.1:69941270-69941289 | None:intergenic | 50.0% | |
AATGCCCACCACAATGCATC+AGG | + | chr2.1:69940069-69940088 | None:intergenic | 50.0% | |
ACATGCCACGATGGATCCAA+GGG | + | chr2.1:69942463-69942482 | None:intergenic | 50.0% | |
ATCGAACCTGAAACCTTGGG+AGG | - | chr2.1:69940721-69940740 | MS.gene002551:CDS | 50.0% | |
ATGAACTTGCCCGCCGAAAT+TGG | - | chr2.1:69940688-69940707 | MS.gene002551:CDS | 50.0% | |
ATGCATGCGGATGGGCATTT+GGG | - | chr2.1:69942293-69942312 | MS.gene002551:intron | 50.0% | |
CACCCCACGAAAGTCATTCA+TGG | + | chr2.1:69941885-69941904 | None:intergenic | 50.0% | |
CCAGGAACACGATCTTCTTC+AGG | + | chr2.1:69942114-69942133 | None:intergenic | 50.0% | |
CCTGAAGAAGATCGTGTTCC+TGG | - | chr2.1:69942111-69942130 | MS.gene002551:intron | 50.0% | |
GAAGGGTTCCTGATGCATTG+TGG | - | chr2.1:69940058-69940077 | MS.gene002551:CDS | 50.0% | |
GATCCATCGTGGCATGTACT+GGG | - | chr2.1:69942466-69942485 | MS.gene002551:intron | 50.0% | |
GCCCCTCTTTCTATCAACTG+AGG | + | chr2.1:69942514-69942533 | None:intergenic | 50.0% | |
GCTTATACTGTCTGGGTGTC+CGG | - | chr2.1:69941624-69941643 | MS.gene002551:intron | 50.0% | |
GGGCAGTACTGCACTTCAAT+GGG | - | chr2.1:69942530-69942549 | MS.gene002551:CDS | 50.0% | |
GGTTCCTGATGCATTGTGGT+GGG | - | chr2.1:69940062-69940081 | MS.gene002551:CDS | 50.0% | |
GTGTCCGGTTGACAACTGAA+TGG | - | chr2.1:69941639-69941658 | MS.gene002551:intron | 50.0% | |
TACATGCCACGATGGATCCA+AGG | + | chr2.1:69942464-69942483 | None:intergenic | 50.0% | |
TGGAGCTGTTGAGACATGCA+TGG | - | chr2.1:69942201-69942220 | MS.gene002551:intron | 50.0% | |
TGGCATCTACCACTATTGGC+AGG | - | chr2.1:69942360-69942379 | MS.gene002551:intron | 50.0% | |
! | GATTTCCCCGGTGCCAATTT+CGG | + | chr2.1:69940704-69940723 | None:intergenic | 50.0% |
! | GTGTAAGTTGGCCTAGTGGT+TGG | + | chr2.1:69940768-69940787 | None:intergenic | 50.0% |
! | TCGTGGCATGTACTGGGTTT+TGG | - | chr2.1:69942472-69942491 | MS.gene002551:intron | 50.0% |
!! | GGTTTCAGGTTCGATTTCCC+CGG | + | chr2.1:69940716-69940735 | None:intergenic | 50.0% |
AAACTCGGCACTTTGCCACC+TGG | - | chr2.1:69942409-69942428 | MS.gene002551:intron | 55.0% | |
AATGCCCATCCGCATGCATC+GGG | + | chr2.1:69942292-69942311 | None:intergenic | 55.0% | |
CAGAACCCTTGGATCCATCG+TGG | - | chr2.1:69942455-69942474 | MS.gene002551:intron | 55.0% | |
CGATGACGTCGTGGTTCAGA+AGG | - | chr2.1:69942135-69942154 | MS.gene002551:intron | 55.0% | |
GATGCATGCGGATGGGCATT+TGG | - | chr2.1:69942292-69942311 | MS.gene002551:intron | 55.0% | |
GGATCCATCGTGGCATGTAC+TGG | - | chr2.1:69942465-69942484 | MS.gene002551:intron | 55.0% | |
GGGGCAGTACTGCACTTCAA+TGG | - | chr2.1:69942529-69942548 | MS.gene002551:CDS | 55.0% | |
GGGTTCCTGATGCATTGTGG+TGG | - | chr2.1:69940061-69940080 | MS.gene002551:CDS | 55.0% | |
GTCTAGACCGCCTTTGTCCA+AGG | - | chr2.1:69940146-69940165 | MS.gene002551:CDS | 55.0% | |
TCAGGAACCCTTCTCCGTAC+TGG | + | chr2.1:69940051-69940070 | None:intergenic | 55.0% | |
TCGAAGGCCAGTACGGAGAA+GGG | - | chr2.1:69940041-69940060 | MS.gene002551:CDS | 55.0% | |
TGACTTTCGTGGGGTGACTG+TGG | - | chr2.1:69941889-69941908 | MS.gene002551:intron | 55.0% | |
TGATCCCGATGCATGCGGAT+GGG | - | chr2.1:69942285-69942304 | MS.gene002551:intron | 55.0% | |
TGTGCTCCTCCCAAGGTTTC+AGG | + | chr2.1:69940730-69940749 | None:intergenic | 55.0% | |
TTCGAAGGCCAGTACGGAGA+AGG | - | chr2.1:69940040-69940059 | MS.gene002551:CDS | 55.0% | |
TTGATCCCGATGCATGCGGA+TGG | - | chr2.1:69942284-69942303 | MS.gene002551:intron | 55.0% | |
! | AGGTGCGGTGATGGTGAGTT+TGG | - | chr2.1:69941142-69941161 | MS.gene002551:CDS | 55.0% |
! | AGTTGGCCTAGTGGTTGGCT+TGG | + | chr2.1:69940763-69940782 | None:intergenic | 55.0% |
! | CATAATGGAGCTGCTGAGCC+TGG | + | chr2.1:69941484-69941503 | None:intergenic | 55.0% |
! | GGTGCGGTGATGGTGAGTTT+GGG | - | chr2.1:69941143-69941162 | MS.gene002551:CDS | 55.0% |
AAATGGGCCCCCCCGCAAAA+GGG | + | chr2.1:69940647-69940666 | None:intergenic | 60.0% | |
CTTGGAGTGTGCTCCTCCCA+AGG | + | chr2.1:69940737-69940756 | None:intergenic | 60.0% | |
GAACCACGACGTCATCGTCC+AGG | + | chr2.1:69942132-69942151 | None:intergenic | 60.0% | |
GTTCCTGGACGATGACGTCG+TGG | - | chr2.1:69942126-69942145 | MS.gene002551:intron | 60.0% | |
TAAATGGGCCCCCCCGCAAA+AGG | + | chr2.1:69940648-69940667 | None:intergenic | 60.0% | |
TTGCCCGCCGAAATTGGCAC+CGG | - | chr2.1:69940694-69940713 | MS.gene002551:CDS | 60.0% | |
! | TTCCCCGGTGCCAATTTCGG+CGG | + | chr2.1:69940701-69940720 | None:intergenic | 60.0% |
TGCCCGCCGAAATTGGCACC+GGG | - | chr2.1:69940695-69940714 | MS.gene002551:CDS | 65.0% | |
! | GGGGGATAGAGGTGCGGTGA+TGG | - | chr2.1:69941133-69941152 | MS.gene002551:CDS | 65.0% |
! | TCCCCGGTGCCAATTTCGGC+GGG | + | chr2.1:69940700-69940719 | None:intergenic | 65.0% |
GCCCGCCGAAATTGGCACCG+GGG | - | chr2.1:69940696-69940715 | MS.gene002551:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 69940018 | 69942657 | 69940018 | ID=MS.gene002551 |
chr2.1 | mRNA | 69940018 | 69942657 | 69940018 | ID=MS.gene002551.t1;Parent=MS.gene002551 |
chr2.1 | exon | 69942508 | 69942657 | 69942508 | ID=MS.gene002551.t1.exon1;Parent=MS.gene002551.t1 |
chr2.1 | CDS | 69942508 | 69942657 | 69942508 | ID=cds.MS.gene002551.t1;Parent=MS.gene002551.t1 |
chr2.1 | exon | 69940018 | 69941469 | 69940018 | ID=MS.gene002551.t1.exon2;Parent=MS.gene002551.t1 |
chr2.1 | CDS | 69940018 | 69941469 | 69940018 | ID=cds.MS.gene002551.t1;Parent=MS.gene002551.t1 |
Gene Sequence |
Protein sequence |