Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022991.t1 | RHN45785.1 | 98.4 | 560 | 7 | 1 | 1 | 558 | 1 | 560 | 0.00E+00 | 1079.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022991.t1 | Q9LSG3 | 82.4 | 544 | 88 | 2 | 15 | 558 | 24 | 559 | 2.8e-262 | 905.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022991.t1 | A0A396H3S3 | 98.4 | 560 | 7 | 1 | 1 | 558 | 1 | 560 | 0.0e+00 | 1079.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54329 | MS.gene022991 | PPI |
MS.gene004225 | MS.gene022991 | PPI |
MS.gene022991 | MS.gene01533 | PPI |
MS.gene01532 | MS.gene022991 | PPI |
MS.gene002551 | MS.gene022991 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022991.t1 | MTR_7g055600 | 100.000 | 434 | 0 | 0 | 125 | 558 | 1 | 434 | 0.0 | 911 |
MS.gene022991.t1 | MTR_7g057530 | 100.000 | 434 | 0 | 0 | 125 | 558 | 1 | 434 | 0.0 | 911 |
MS.gene022991.t1 | MTR_6g016380 | 65.505 | 545 | 174 | 6 | 16 | 558 | 23 | 555 | 0.0 | 737 |
MS.gene022991.t1 | MTR_7g075840 | 57.317 | 410 | 169 | 4 | 149 | 556 | 257 | 662 | 7.25e-159 | 469 |
MS.gene022991.t1 | MTR_2g027740 | 54.015 | 411 | 179 | 5 | 149 | 556 | 262 | 665 | 9.13e-157 | 463 |
MS.gene022991.t1 | MTR_3g107930 | 46.154 | 520 | 252 | 8 | 46 | 556 | 86 | 586 | 3.96e-155 | 456 |
MS.gene022991.t1 | MTR_3g107930 | 46.154 | 520 | 252 | 8 | 46 | 556 | 163 | 663 | 2.59e-154 | 457 |
MS.gene022991.t1 | MTR_8g033360 | 57.294 | 377 | 155 | 4 | 149 | 522 | 224 | 597 | 9.92e-149 | 444 |
MS.gene022991.t1 | MTR_8g092000 | 49.640 | 417 | 201 | 3 | 142 | 557 | 171 | 579 | 6.87e-147 | 435 |
MS.gene022991.t1 | MTR_2g015550 | 44.885 | 479 | 244 | 7 | 80 | 556 | 72 | 532 | 8.81e-147 | 433 |
MS.gene022991.t1 | MTR_4g109890 | 42.029 | 552 | 278 | 11 | 12 | 554 | 14 | 532 | 4.07e-143 | 424 |
MS.gene022991.t1 | MTR_2g461670 | 44.647 | 439 | 230 | 6 | 123 | 557 | 161 | 590 | 9.59e-130 | 392 |
MS.gene022991.t1 | MTR_2g006790 | 40.625 | 480 | 239 | 9 | 80 | 556 | 72 | 508 | 6.04e-121 | 366 |
MS.gene022991.t1 | MTR_2g082650 | 42.928 | 403 | 214 | 4 | 170 | 556 | 8 | 410 | 1.36e-115 | 349 |
MS.gene022991.t1 | MTR_2g082650 | 42.118 | 425 | 226 | 6 | 152 | 556 | 115 | 539 | 4.03e-114 | 350 |
MS.gene022991.t1 | MTR_7g012370 | 44.051 | 395 | 199 | 8 | 172 | 545 | 131 | 524 | 1.66e-110 | 341 |
MS.gene022991.t1 | MTR_4g133570 | 42.748 | 393 | 209 | 4 | 180 | 556 | 70 | 462 | 2.61e-109 | 335 |
MS.gene022991.t1 | MTR_6g013840 | 42.788 | 416 | 213 | 9 | 162 | 556 | 119 | 530 | 6.74e-100 | 313 |
MS.gene022991.t1 | MTR_3g452360 | 39.108 | 381 | 209 | 7 | 190 | 554 | 4 | 377 | 3.08e-90 | 283 |
MS.gene022991.t1 | MTR_3g452360 | 38.520 | 392 | 218 | 7 | 179 | 554 | 142 | 526 | 8.03e-90 | 286 |
MS.gene022991.t1 | MTR_7g096160 | 33.603 | 494 | 256 | 9 | 106 | 556 | 188 | 652 | 6.66e-87 | 282 |
MS.gene022991.t1 | MTR_1g070490 | 38.965 | 367 | 185 | 7 | 179 | 537 | 243 | 578 | 1.91e-78 | 259 |
MS.gene022991.t1 | MTR_7g012370 | 43.590 | 312 | 156 | 7 | 172 | 464 | 131 | 441 | 1.56e-77 | 252 |
MS.gene022991.t1 | MTR_4g133942 | 49.000 | 200 | 72 | 3 | 360 | 556 | 160 | 332 | 3.75e-57 | 194 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 258 | 602 | 7.87e-57 | 201 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 218 | 562 | 8.28e-57 | 200 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 278 | 622 | 1.27e-56 | 201 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 278 | 622 | 1.33e-56 | 201 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 298 | 642 | 1.54e-56 | 201 |
MS.gene022991.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 315 | 659 | 2.01e-56 | 201 |
MS.gene022991.t1 | MTR_5g036580 | 25.776 | 322 | 197 | 9 | 234 | 543 | 65 | 356 | 7.48e-24 | 104 |
MS.gene022991.t1 | MTR_4g118030 | 32.124 | 193 | 118 | 6 | 362 | 543 | 145 | 335 | 7.59e-23 | 100 |
MS.gene022991.t1 | MTR_3g092310 | 30.526 | 190 | 124 | 5 | 362 | 543 | 140 | 329 | 1.56e-22 | 99.4 |
MS.gene022991.t1 | MTR_7g094230 | 30.857 | 175 | 116 | 3 | 362 | 531 | 151 | 325 | 6.34e-22 | 97.8 |
MS.gene022991.t1 | MTR_6g008900 | 30.000 | 200 | 125 | 7 | 338 | 528 | 146 | 339 | 9.83e-21 | 94.7 |
MS.gene022991.t1 | MTR_4g071620 | 30.000 | 200 | 125 | 7 | 338 | 528 | 146 | 339 | 9.83e-21 | 94.7 |
MS.gene022991.t1 | MTR_7g109210 | 25.786 | 318 | 188 | 11 | 233 | 539 | 61 | 341 | 2.78e-20 | 93.2 |
MS.gene022991.t1 | MTR_3g111600 | 27.778 | 198 | 134 | 5 | 362 | 550 | 80 | 277 | 4.00e-18 | 85.1 |
MS.gene022991.t1 | MTR_1g021855 | 29.648 | 199 | 130 | 6 | 362 | 550 | 165 | 363 | 2.62e-17 | 84.3 |
MS.gene022991.t1 | MTR_5g019220 | 28.643 | 199 | 133 | 6 | 362 | 551 | 166 | 364 | 2.30e-16 | 81.3 |
MS.gene022991.t1 | MTR_8g078240 | 26.866 | 201 | 136 | 6 | 362 | 551 | 142 | 342 | 1.24e-15 | 79.0 |
MS.gene022991.t1 | MTR_1g089820 | 30.286 | 175 | 117 | 4 | 362 | 531 | 154 | 328 | 7.14e-15 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022991.t1 | AT3G25140 | 87.525 | 497 | 62 | 0 | 62 | 558 | 63 | 559 | 0.0 | 931 |
MS.gene022991.t1 | AT3G02350 | 67.890 | 545 | 169 | 3 | 15 | 558 | 22 | 561 | 0.0 | 746 |
MS.gene022991.t1 | AT3G61130 | 53.437 | 451 | 200 | 6 | 110 | 556 | 227 | 671 | 4.91e-170 | 498 |
MS.gene022991.t1 | AT5G47780 | 53.349 | 418 | 189 | 3 | 141 | 557 | 203 | 615 | 9.49e-160 | 469 |
MS.gene022991.t1 | AT4G38270 | 54.476 | 391 | 175 | 2 | 169 | 556 | 288 | 678 | 9.42e-153 | 454 |
MS.gene022991.t1 | AT4G38270 | 54.476 | 391 | 175 | 2 | 169 | 556 | 284 | 674 | 9.71e-153 | 453 |
MS.gene022991.t1 | AT1G18580 | 48.649 | 407 | 201 | 5 | 152 | 554 | 132 | 534 | 2.98e-143 | 424 |
MS.gene022991.t1 | AT2G46480 | 49.880 | 415 | 204 | 3 | 142 | 554 | 124 | 536 | 2.65e-142 | 422 |
MS.gene022991.t1 | AT2G46480 | 49.880 | 415 | 204 | 3 | 142 | 554 | 137 | 549 | 4.04e-142 | 422 |
MS.gene022991.t1 | AT2G20810 | 45.106 | 470 | 241 | 9 | 97 | 556 | 73 | 535 | 3.38e-133 | 399 |
MS.gene022991.t1 | AT2G46480 | 46.506 | 415 | 193 | 4 | 142 | 554 | 124 | 511 | 1.30e-126 | 381 |
MS.gene022991.t1 | AT2G46480 | 46.506 | 415 | 193 | 4 | 142 | 554 | 137 | 524 | 3.22e-126 | 380 |
MS.gene022991.t1 | AT5G54690 | 41.256 | 446 | 235 | 6 | 137 | 556 | 88 | 532 | 7.84e-114 | 349 |
MS.gene022991.t1 | AT3G01040 | 44.643 | 392 | 195 | 7 | 186 | 556 | 140 | 530 | 1.92e-107 | 332 |
MS.gene022991.t1 | AT3G01040 | 44.643 | 392 | 195 | 7 | 186 | 556 | 140 | 530 | 1.92e-107 | 332 |
MS.gene022991.t1 | AT5G15470 | 44.810 | 395 | 190 | 9 | 186 | 556 | 140 | 530 | 2.96e-105 | 327 |
MS.gene022991.t1 | AT1G06780 | 40.238 | 420 | 219 | 5 | 142 | 556 | 195 | 587 | 6.07e-99 | 312 |
MS.gene022991.t1 | AT1G06780 | 40.238 | 420 | 219 | 5 | 142 | 556 | 208 | 600 | 6.56e-99 | 312 |
MS.gene022991.t1 | AT3G01040 | 42.636 | 387 | 177 | 9 | 186 | 556 | 140 | 497 | 4.61e-95 | 299 |
MS.gene022991.t1 | AT2G30575 | 38.480 | 421 | 224 | 5 | 142 | 556 | 217 | 608 | 4.55e-94 | 300 |
MS.gene022991.t1 | AT3G58790 | 34.829 | 468 | 258 | 11 | 123 | 554 | 80 | 536 | 4.59e-84 | 271 |
MS.gene022991.t1 | AT3G58790 | 37.688 | 398 | 215 | 9 | 181 | 554 | 16 | 404 | 3.78e-83 | 265 |
MS.gene022991.t1 | AT2G38650 | 32.091 | 483 | 286 | 11 | 76 | 555 | 173 | 616 | 7.34e-60 | 209 |
MS.gene022991.t1 | AT2G38650 | 32.091 | 483 | 286 | 11 | 76 | 555 | 173 | 616 | 7.34e-60 | 209 |
MS.gene022991.t1 | AT2G38650 | 31.714 | 391 | 226 | 10 | 76 | 464 | 173 | 524 | 8.22e-38 | 147 |
MS.gene022991.t1 | AT1G70090 | 25.321 | 312 | 191 | 10 | 244 | 543 | 78 | 359 | 4.17e-22 | 99.0 |
MS.gene022991.t1 | AT1G70090 | 25.321 | 312 | 191 | 10 | 244 | 543 | 78 | 359 | 4.17e-22 | 99.0 |
MS.gene022991.t1 | AT3G06260 | 29.167 | 192 | 124 | 5 | 362 | 543 | 150 | 339 | 4.72e-22 | 98.2 |
MS.gene022991.t1 | AT3G62660 | 28.507 | 221 | 144 | 7 | 332 | 543 | 138 | 353 | 1.14e-21 | 97.4 |
MS.gene022991.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.99e-21 | 96.3 |
MS.gene022991.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.99e-21 | 96.3 |
MS.gene022991.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.99e-21 | 96.3 |
MS.gene022991.t1 | AT1G24170 | 24.359 | 312 | 194 | 9 | 244 | 543 | 81 | 362 | 5.33e-21 | 95.9 |
MS.gene022991.t1 | AT1G02720 | 27.354 | 223 | 148 | 7 | 330 | 543 | 137 | 354 | 2.87e-20 | 93.2 |
MS.gene022991.t1 | AT1G02720 | 27.354 | 223 | 148 | 7 | 330 | 543 | 137 | 354 | 2.87e-20 | 93.2 |
MS.gene022991.t1 | AT3G28340 | 27.315 | 216 | 142 | 7 | 338 | 543 | 136 | 346 | 9.38e-20 | 91.7 |
MS.gene022991.t1 | AT1G19300 | 27.778 | 198 | 134 | 6 | 362 | 550 | 150 | 347 | 7.24e-17 | 82.8 |
MS.gene022991.t1 | AT1G13250 | 28.947 | 190 | 127 | 4 | 362 | 543 | 144 | 333 | 7.55e-16 | 79.7 |
MS.gene022991.t1 | AT3G50760 | 28.079 | 203 | 134 | 7 | 360 | 550 | 134 | 336 | 8.98e-14 | 73.2 |
Find 127 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAACCGACAAAATGAATT+TGG | 0.150371 | 7.2:+49090192 | MS.gene022991:CDS |
TTCAAAATGGACAAATATTT+AGG | 0.200677 | 7.2:-49090415 | None:intergenic |
TGCAACTTAGGATACATTTC+TGG | 0.227262 | 7.2:-49090457 | None:intergenic |
TGGAATGAATTTCTTTGATT+TGG | 0.245500 | 7.2:+49090675 | MS.gene022991:CDS |
GGATAAATCATGGCATGTTC+TGG | 0.257545 | 7.2:+49091476 | MS.gene022991:CDS |
AAGGCTTGTGCATGGGCTTA+TGG | 0.278045 | 7.2:+49090655 | MS.gene022991:CDS |
TTGGTTATCAAAGGACTCTT+TGG | 0.286762 | 7.2:-49089849 | None:intergenic |
TTGAGAGCTCAAAGCTTGTT+AGG | 0.321140 | 7.2:+49089663 | MS.gene022991:CDS |
CCTTCACTTCCTTCTCCAAT+TGG | 0.322458 | 7.2:-49089790 | None:intergenic |
TTTGTTCAGGCCTGCAATTT+TGG | 0.332215 | 7.2:+49091645 | MS.gene022991:CDS |
GATAGACAATGCAAGCTCTT+TGG | 0.334367 | 7.2:-49089977 | None:intergenic |
AACCGAACATTATGGAAATT+AGG | 0.336481 | 7.2:+49091405 | MS.gene022991:CDS |
AGAAGGACCTTACTGGGTTA+TGG | 0.339063 | 7.2:+49090515 | MS.gene022991:CDS |
ATCTCATCCATGCTGATGCT+TGG | 0.340802 | 7.2:-49091513 | None:intergenic |
GTAGTTCAGAAGGACCTTAC+TGG | 0.354782 | 7.2:+49090508 | MS.gene022991:CDS |
GAATCTCAAATGATTCAAAA+TGG | 0.356380 | 7.2:-49090428 | None:intergenic |
TCTTCAACTTCCGGAGGAAT+AGG | 0.356969 | 7.2:-49090058 | None:intergenic |
CATATTTGTTGTGTCCTTTG+TGG | 0.362763 | 7.2:-49090380 | None:intergenic |
AGATTAGGATCTTCAACTTC+CGG | 0.365183 | 7.2:-49090067 | None:intergenic |
GGAGCTGTAGAAACATGTTT+TGG | 0.370276 | 7.2:+49090565 | MS.gene022991:CDS |
GGAAGAACGGATTGCTCATC+CGG | 0.375549 | 7.2:+49090012 | MS.gene022991:CDS |
TAAGCCCATGCACAAGCCTT+TGG | 0.378231 | 7.2:-49090652 | None:intergenic |
AGCTGAGGATCATAAGTCTT+TGG | 0.384718 | 7.2:+49089604 | MS.gene022991:CDS |
TTAAATTTAGCTTTGATCAA+TGG | 0.385570 | 7.2:-49090628 | None:intergenic |
TCATGGCATGTTCTGGGACT+TGG | 0.390308 | 7.2:+49091483 | MS.gene022991:CDS |
ATCTGTTCTGGCACTGAAAA+CGG | 0.392593 | 7.2:+49089544 | MS.gene022991:CDS |
AATAAAACTTTATGCAACTT+AGG | 0.395523 | 7.2:-49090469 | None:intergenic |
CCGGCACATAAGAAGAATTC+AGG | 0.397017 | 7.2:-49090294 | None:intergenic |
ACACAACAAATATGAAGTTC+AGG | 0.398619 | 7.2:+49090389 | MS.gene022991:CDS |
CTCGACAAGGAGATCTGTTC+TGG | 0.406786 | 7.2:+49089532 | MS.gene022991:CDS |
TTCCTAATTTCCATAATGTT+CGG | 0.408121 | 7.2:-49091407 | None:intergenic |
GTAACCGACAAAATGAATTT+GGG | 0.408273 | 7.2:+49090193 | MS.gene022991:CDS |
CGTCGAATTAGAGTTTGTTC+AGG | 0.411356 | 7.2:+49091632 | MS.gene022991:CDS |
CGAACCACCGATTCATCAAC+AGG | 0.412937 | 7.2:-49089767 | None:intergenic |
GCAAGTGATGTTCAAGTTGA+AGG | 0.415890 | 7.2:+49090222 | MS.gene022991:CDS |
TGAATCGGTGGTTCGCCAAT+TGG | 0.416083 | 7.2:+49089775 | MS.gene022991:CDS |
TGTGCCGGTCCTTCGACAAC+TGG | 0.417437 | 7.2:+49090309 | MS.gene022991:CDS |
TGGAGCTCACATTGAGGTTA+AGG | 0.431929 | 7.2:+49090252 | MS.gene022991:CDS |
TCTCATCCATGCTGATGCTT+GGG | 0.432230 | 7.2:-49091512 | None:intergenic |
TATGATCCTCAGCTTGCTTA+CGG | 0.432749 | 7.2:-49089595 | None:intergenic |
GCACAGAAGAGTATCATTAC+TGG | 0.434927 | 7.2:+49090719 | MS.gene022991:CDS |
GTATCATTACTGGCAGAATC+TGG | 0.437903 | 7.2:+49090729 | MS.gene022991:CDS |
TTGTACTAGGATTCTGATGA+TGG | 0.450391 | 7.2:+49089488 | MS.gene022991:intron |
TGGGTTATGGAAGATTGATA+TGG | 0.454907 | 7.2:+49090528 | MS.gene022991:CDS |
AGAATGAGAACCGAACATTA+TGG | 0.455370 | 7.2:+49091397 | MS.gene022991:intron |
GATAAATCATGGCATGTTCT+GGG | 0.458932 | 7.2:+49091477 | MS.gene022991:CDS |
AAAACTACGCGCCAGGTGAT+TGG | 0.459842 | 7.2:+49089821 | MS.gene022991:CDS |
TGATGAGCAAACCTCGATAC+AGG | 0.462445 | 7.2:+49089720 | MS.gene022991:CDS |
ATTTCTTTGATTTGGATGCT+TGG | 0.467532 | 7.2:+49090683 | MS.gene022991:CDS |
GATGATGGTGGTGTTGCTCA+TGG | 0.474346 | 7.2:+49089503 | MS.gene022991:CDS |
TCTCAAAGTAAAATTTCTGC+AGG | 0.482721 | 7.2:-49090342 | None:intergenic |
TGACTCAGTTCAAGCCACTT+TGG | 0.487442 | 7.2:+49091595 | MS.gene022991:CDS |
CCTGAATTCTTCTTATGTGC+CGG | 0.493252 | 7.2:+49090294 | MS.gene022991:CDS |
AAGGCGTAGTGATATAGATT+AGG | 0.494787 | 7.2:-49090082 | None:intergenic |
CCCTCATCGATATACTTCTC+CGG | 0.501384 | 7.2:-49090031 | None:intergenic |
GTAAAATTTCTGCAGGTTAG+CGG | 0.505828 | 7.2:-49090335 | None:intergenic |
TCATCATCAACAACAAAACT+TGG | 0.510594 | 7.2:+49088967 | MS.gene022991:CDS |
GATATGGATGGCAAGGTGAA+TGG | 0.512206 | 7.2:+49090544 | MS.gene022991:CDS |
TGCAGTCCCTGTTGATGAAT+CGG | 0.514874 | 7.2:+49089760 | MS.gene022991:CDS |
TCAACTTCTGAATCTTCAGT+TGG | 0.515653 | 7.2:-49089868 | None:intergenic |
CAATCTTCCATAACCCAGTA+AGG | 0.515757 | 7.2:-49090522 | None:intergenic |
TTGATTTGGATGCTTGGAGA+AGG | 0.516586 | 7.2:+49090689 | MS.gene022991:CDS |
AGCGATGAGAGTGAAGAAGA+AGG | 0.517885 | 7.2:-49088885 | None:intergenic |
AATCTTCAGTTGGTTATCAA+AGG | 0.522682 | 7.2:-49089858 | None:intergenic |
ACATGAAACACGTGCTTCCA+CGG | 0.525426 | 7.2:-49090169 | None:intergenic |
AGAGTGAAGAAGAAGGTGAA+GGG | 0.527247 | 7.2:-49088878 | None:intergenic |
CTTTGGCTTCACCAATCACC+TGG | 0.530940 | 7.2:-49089832 | None:intergenic |
CAAAGCTAAATTTAATCCAA+AGG | 0.531952 | 7.2:+49090636 | MS.gene022991:CDS |
CGAAGCCACTGGATAAATCA+TGG | 0.532470 | 7.2:+49091466 | MS.gene022991:CDS |
TGAAGAAGAAGGTGAAGGGT+CGG | 0.533434 | 7.2:-49088874 | None:intergenic |
GCGGATTAAAACTACGCGCC+AGG | 0.536309 | 7.2:+49089814 | MS.gene022991:CDS |
TAATCCAAAGGCTTGTGCAT+GGG | 0.540043 | 7.2:+49090648 | MS.gene022991:CDS |
TGTGATTAGACCAGGTGGTA+AGG | 0.540072 | 7.2:-49091430 | None:intergenic |
TAGTTCAGAAGGACCTTACT+GGG | 0.540114 | 7.2:+49090509 | MS.gene022991:CDS |
AAACGGATCCGCTCAAGCCT+CGG | 0.542028 | 7.2:+49089561 | MS.gene022991:CDS |
TTACTCAACAACGAAGCCAC+TGG | 0.544084 | 7.2:+49091455 | MS.gene022991:CDS |
TTAATCCAAAGGCTTGTGCA+TGG | 0.545140 | 7.2:+49090647 | MS.gene022991:CDS |
ACTGAAGATTCAGAAGTTGA+AGG | 0.545368 | 7.2:+49089871 | MS.gene022991:CDS |
GATTCCAGTTGTCGAAGGAC+CGG | 0.548394 | 7.2:-49090313 | None:intergenic |
TGAGGGGAAGCCTATTCCTC+CGG | 0.553826 | 7.2:+49090048 | MS.gene022991:CDS |
CTCATGGATTTGACTCGACA+AGG | 0.554568 | 7.2:+49089519 | MS.gene022991:CDS |
CCGGAGAAGTATATCGATGA+GGG | 0.559275 | 7.2:+49090031 | MS.gene022991:CDS |
TACAACATTGTCAGAGAACA+AGG | 0.567266 | 7.2:-49090101 | None:intergenic |
TCAACATACTTTGACCAAAG+TGG | 0.568135 | 7.2:-49091609 | None:intergenic |
GGATCCGCTCAAGCCTCGGT+TGG | 0.571619 | 7.2:+49089565 | MS.gene022991:CDS |
CTGAAAAGATTCCTGTATCG+AGG | 0.573931 | 7.2:-49089731 | None:intergenic |
TGATTTGGATGCTTGGAGAA+GGG | 0.576059 | 7.2:+49090690 | MS.gene022991:CDS |
GAGAGTGAAGAAGAAGGTGA+AGG | 0.579310 | 7.2:-49088879 | None:intergenic |
TGTTGTAGCCGCGTCTGTTG+TGG | 0.579781 | 7.2:+49090117 | MS.gene022991:CDS |
GTCATTGCAATATCAAGCCA+TGG | 0.583682 | 7.2:-49091576 | None:intergenic |
GGTGGTTCGCCAATTGGAGA+AGG | 0.584225 | 7.2:+49089781 | MS.gene022991:CDS |
ATCCTGAAGCGAGGAAAACG+AGG | 0.584562 | 7.2:-49088851 | None:intergenic |
TGATCCAACCGAGGCTTGAG+CGG | 0.585144 | 7.2:-49089569 | None:intergenic |
GCAGCTGTGGTGCATTTCAA+TGG | 0.586460 | 7.2:+49091543 | MS.gene022991:CDS |
TAGCGGATTCCAGTTGTCGA+AGG | 0.589025 | 7.2:-49090318 | None:intergenic |
TTGTCTATCAATGAGGCTGA+TGG | 0.589221 | 7.2:+49089991 | MS.gene022991:CDS |
ACATGCCATGATTTATCCAG+TGG | 0.592945 | 7.2:-49091471 | None:intergenic |
TGATGACATAGTAGTTCAGA+AGG | 0.594090 | 7.2:+49090498 | MS.gene022991:CDS |
CAATGAGGCTGATGGAAGAA+CGG | 0.596479 | 7.2:+49089999 | MS.gene022991:CDS |
CAAAGAACGCAAAGGAACCG+TGG | 0.597241 | 7.2:+49090152 | MS.gene022991:CDS |
CCAATTGGAGAAGGAAGTGA+AGG | 0.618745 | 7.2:+49089790 | MS.gene022991:CDS |
GAAGATTGATATGGATGGCA+AGG | 0.619645 | 7.2:+49090537 | MS.gene022991:CDS |
TACTAGGATTCTGATGATGG+TGG | 0.629353 | 7.2:+49089491 | MS.gene022991:intron |
TTCAAGTTGAAGGATTACAA+TGG | 0.630042 | 7.2:+49090232 | MS.gene022991:CDS |
TTATGGAAGATTGATATGGA+TGG | 0.639037 | 7.2:+49090532 | MS.gene022991:CDS |
CAAGCTCGAGAATGCCACAA+AGG | 0.639830 | 7.2:+49090366 | MS.gene022991:CDS |
TGGAGAAGGAAGTGAAGGAG+CGG | 0.641149 | 7.2:+49089795 | MS.gene022991:CDS |
TTACAATGGAGCTCACATTG+AGG | 0.641182 | 7.2:+49090246 | MS.gene022991:CDS |
TTGTTGTTGATGATGATGAG+AGG | 0.644563 | 7.2:-49088960 | None:intergenic |
TCAATGGTAACATGAAACCA+TGG | 0.644737 | 7.2:+49091559 | MS.gene022991:CDS |
TTATAACCCAAGCATCAGCA+TGG | 0.655654 | 7.2:+49091506 | MS.gene022991:CDS |
AAATTAGGAACCTTACCACC+TGG | 0.658960 | 7.2:+49091420 | MS.gene022991:CDS |
TTAGGATCTTCAACTTCCGG+AGG | 0.659224 | 7.2:-49090064 | None:intergenic |
TGAGATTAACAATGCAGCTG+TGG | 0.662585 | 7.2:+49091530 | MS.gene022991:CDS |
TCCGGAGAAGTATATCGATG+AGG | 0.662744 | 7.2:+49090030 | MS.gene022991:CDS |
TGTAAATGAGCAGTTAACAA+AGG | 0.669256 | 7.2:+49089907 | MS.gene022991:CDS |
CTCAGCAACAAAGAACGCAA+AGG | 0.669841 | 7.2:+49090144 | MS.gene022991:CDS |
GCTTGCATTGTCTATCAATG+AGG | 0.670067 | 7.2:+49089984 | MS.gene022991:CDS |
GAGTAATATGTGATTAGACC+AGG | 0.674075 | 7.2:-49091438 | None:intergenic |
TCAGATCCGTAAGCAAGCTG+AGG | 0.675215 | 7.2:+49089589 | MS.gene022991:CDS |
CGGAGAAGTATATCGATGAG+GGG | 0.679947 | 7.2:+49090032 | MS.gene022991:CDS |
TAATATGTGATTAGACCAGG+TGG | 0.684716 | 7.2:-49091435 | None:intergenic |
TGAGTTAACCACAACAGACG+CGG | 0.691769 | 7.2:-49090125 | None:intergenic |
AAGGGTCGGATCCTGAAGCG+AGG | 0.695100 | 7.2:-49088860 | None:intergenic |
TTACGGATCTGATCCAACCG+AGG | 0.699692 | 7.2:-49089578 | None:intergenic |
AGTCCCTGTTGATGAATCGG+TGG | 0.706928 | 7.2:+49089763 | MS.gene022991:CDS |
GAACCACCGATTCATCAACA+GGG | 0.762550 | 7.2:-49089766 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATCAGAAAACAAAA+AGG | - | chr7.2:49089026-49089045 | None:intergenic | 15.0% |
!! | ATTTGCATTTCTATTTAAAA+TGG | - | chr7.2:49091338-49091357 | None:intergenic | 15.0% |
!!! | TTTTATCAGGAAAATAAATA+TGG | + | chr7.2:49089236-49089255 | MS.gene022991:intron | 15.0% |
!!! | TTTTATGATATAGTTTATCT+AGG | + | chr7.2:49089418-49089437 | MS.gene022991:intron | 15.0% |
!! | AATAAAACTTTATGCAACTT+AGG | - | chr7.2:49090472-49090491 | None:intergenic | 20.0% |
!! | ACATATCATGTTATAATACA+TGG | - | chr7.2:49091365-49091384 | None:intergenic | 20.0% |
!! | TATATAGATTTGATGTAGTT+AGG | + | chr7.2:49089287-49089306 | MS.gene022991:intron | 20.0% |
!! | TTCAAAATGGACAAATATTT+AGG | - | chr7.2:49090418-49090437 | None:intergenic | 20.0% |
!!! | AAAATTTTGCATTTCTTTTC+TGG | + | chr7.2:49089259-49089278 | MS.gene022991:intron | 20.0% |
!!! | AAATTTTGCATTTCTTTTCT+GGG | + | chr7.2:49089260-49089279 | MS.gene022991:intron | 20.0% |
!!! | AAGTTTGTTTAATATGTAAC+TGG | + | chr7.2:49089377-49089396 | MS.gene022991:intron | 20.0% |
!!! | ATTTTTGTCTTTTTTGTTTC+TGG | + | chr7.2:49089094-49089113 | MS.gene022991:intron | 20.0% |
!!! | GTTGCATAAAGTTTTATTTT+TGG | + | chr7.2:49090474-49090493 | MS.gene022991:CDS | 20.0% |
!!! | GTTTAATTTGAGGAAAAATT+TGG | + | chr7.2:49089121-49089140 | MS.gene022991:intron | 20.0% |
!!! | TTAAATTTAGCTTTGATCAA+TGG | - | chr7.2:49090631-49090650 | None:intergenic | 20.0% |
!!! | TTATTAACAATCTAAAACCT+AGG | - | chr7.2:49090851-49090870 | None:intergenic | 20.0% |
!!! | TTTTTGTCTTTTTTGTTTCT+GGG | + | chr7.2:49089095-49089114 | MS.gene022991:intron | 20.0% |
! | AATTTGAGGAAAAATTTGGT+GGG | + | chr7.2:49089125-49089144 | MS.gene022991:intron | 25.0% |
! | ATAGTAGTAAATACAATCCT+AGG | + | chr7.2:49090831-49090850 | MS.gene022991:intron | 25.0% |
! | CAAAGCTAAATTTAATCCAA+AGG | + | chr7.2:49090636-49090655 | MS.gene022991:CDS | 25.0% |
! | GAATCTCAAATGATTCAAAA+TGG | - | chr7.2:49090431-49090450 | None:intergenic | 25.0% |
! | GTGGTAAATAATACAAGAAT+AGG | - | chr7.2:49090779-49090798 | None:intergenic | 25.0% |
! | TAATTTGAGGAAAAATTTGG+TGG | + | chr7.2:49089124-49089143 | MS.gene022991:intron | 25.0% |
! | TGATATAGTTTATCTAGGAA+AGG | + | chr7.2:49089423-49089442 | MS.gene022991:intron | 25.0% |
! | TGGAATGAATTTCTTTGATT+TGG | + | chr7.2:49090675-49090694 | MS.gene022991:CDS | 25.0% |
! | TGTTTAATATGTAACTGGAA+AGG | + | chr7.2:49089382-49089401 | MS.gene022991:intron | 25.0% |
! | TTCCTAATTTCCATAATGTT+CGG | - | chr7.2:49091410-49091429 | None:intergenic | 25.0% |
!! | TTTAAAACCTTGGTATCAAT+AGG | - | chr7.2:49090896-49090915 | None:intergenic | 25.0% |
!!! | ATGATGTTTGGTGATTATTT+TGG | + | chr7.2:49089339-49089358 | MS.gene022991:intron | 25.0% |
!!! | TCATTTTAAAGTATCAACCA+AGG | - | chr7.2:49091194-49091213 | None:intergenic | 25.0% |
!!! | TGATGTTTGGTGATTATTTT+GGG | + | chr7.2:49089340-49089359 | MS.gene022991:intron | 25.0% |
AACCGAACATTATGGAAATT+AGG | + | chr7.2:49091405-49091424 | MS.gene022991:CDS | 30.0% | |
AATCATCATATCACTAGCAT+TGG | + | chr7.2:49091224-49091243 | MS.gene022991:intron | 30.0% | |
AATCTTCAGTTGGTTATCAA+AGG | - | chr7.2:49089861-49089880 | None:intergenic | 30.0% | |
ACACAACAAATATGAAGTTC+AGG | + | chr7.2:49090389-49090408 | MS.gene022991:CDS | 30.0% | |
GTAACCGACAAAATGAATTT+GGG | + | chr7.2:49090193-49090212 | MS.gene022991:CDS | 30.0% | |
GTATCAATAGGAAACAAACA+GGG | - | chr7.2:49090884-49090903 | None:intergenic | 30.0% | |
TCATCATCAACAACAAAACT+TGG | + | chr7.2:49088967-49088986 | MS.gene022991:CDS | 30.0% | |
TCTCAAAGTAAAATTTCTGC+AGG | - | chr7.2:49090345-49090364 | None:intergenic | 30.0% | |
TGTAAATGAGCAGTTAACAA+AGG | + | chr7.2:49089907-49089926 | MS.gene022991:CDS | 30.0% | |
TGTAACCGACAAAATGAATT+TGG | + | chr7.2:49090192-49090211 | MS.gene022991:CDS | 30.0% | |
TTATGGAAGATTGATATGGA+TGG | + | chr7.2:49090532-49090551 | MS.gene022991:CDS | 30.0% | |
TTTGTTTCCTATTGATACCA+AGG | + | chr7.2:49090886-49090905 | MS.gene022991:intron | 30.0% | |
! | ATTTGAGGAAAAATTTGGTG+GGG | + | chr7.2:49089126-49089145 | MS.gene022991:intron | 30.0% |
! | GTTGTTATGGTTTTTGTACT+AGG | + | chr7.2:49089475-49089494 | MS.gene022991:intron | 30.0% |
! | TGATGCGTCTAAATTTTATC+AGG | + | chr7.2:49089223-49089242 | MS.gene022991:intron | 30.0% |
! | TTTTCAACTAGGATGATGTT+TGG | + | chr7.2:49089327-49089346 | MS.gene022991:intron | 30.0% |
!! | ATTCTCTCTAGAACCATTTA+GGG | + | chr7.2:49089198-49089217 | MS.gene022991:intron | 30.0% |
!! | ATTTCTTTGATTTGGATGCT+TGG | + | chr7.2:49090683-49090702 | MS.gene022991:CDS | 30.0% |
!! | GTTTTCTGATTTTTTTCTCC+CGG | + | chr7.2:49089030-49089049 | MS.gene022991:intron | 30.0% |
!! | TGTTGTTGTGTTTTTCAACT+AGG | + | chr7.2:49089316-49089335 | MS.gene022991:intron | 30.0% |
!! | TTCAAGTTGAAGGATTACAA+TGG | + | chr7.2:49090232-49090251 | MS.gene022991:CDS | 30.0% |
!! | TTTTCTGATTTTTTTCTCCC+GGG | + | chr7.2:49089031-49089050 | MS.gene022991:intron | 30.0% |
AAGGCGTAGTGATATAGATT+AGG | - | chr7.2:49090085-49090104 | None:intergenic | 35.0% | |
ACTATGTACTTAATCGCGTA+TGG | - | chr7.2:49091008-49091027 | None:intergenic | 35.0% | |
ACTGAAGATTCAGAAGTTGA+AGG | + | chr7.2:49089871-49089890 | MS.gene022991:CDS | 35.0% | |
AGAATGAGAACCGAACATTA+TGG | + | chr7.2:49091397-49091416 | MS.gene022991:intron | 35.0% | |
AGATTAGGATCTTCAACTTC+CGG | - | chr7.2:49090070-49090089 | None:intergenic | 35.0% | |
AGCAACGATATAACACTGTA+GGG | + | chr7.2:49091047-49091066 | MS.gene022991:intron | 35.0% | |
AGGAAACAAACAGGGTTAAA+CGG | - | chr7.2:49090876-49090895 | None:intergenic | 35.0% | |
CTTACTGTCTAGGTTCAAAT+GGG | + | chr7.2:49089166-49089185 | MS.gene022991:intron | 35.0% | |
GAGAATAAGACTAGCATACA+TGG | - | chr7.2:49091293-49091312 | None:intergenic | 35.0% | |
GAGTAATATGTGATTAGACC+AGG | - | chr7.2:49091441-49091460 | None:intergenic | 35.0% | |
GATAAATCATGGCATGTTCT+GGG | + | chr7.2:49091477-49091496 | MS.gene022991:CDS | 35.0% | |
GCTATGTTGATCTGTTGTTA+TGG | + | chr7.2:49089462-49089481 | MS.gene022991:intron | 35.0% | |
GGTATCAATAGGAAACAAAC+AGG | - | chr7.2:49090885-49090904 | None:intergenic | 35.0% | |
GTAAAATTTCTGCAGGTTAG+CGG | - | chr7.2:49090338-49090357 | None:intergenic | 35.0% | |
GTTTCAAATCACGATCGATA+TGG | - | chr7.2:49091172-49091191 | None:intergenic | 35.0% | |
TAATATGTGATTAGACCAGG+TGG | - | chr7.2:49091438-49091457 | None:intergenic | 35.0% | |
TACAACATTGTCAGAGAACA+AGG | - | chr7.2:49090104-49090123 | None:intergenic | 35.0% | |
TACATAGTGTAGTCAAGTAG+TGG | + | chr7.2:49091020-49091039 | MS.gene022991:intron | 35.0% | |
TAGCAACGATATAACACTGT+AGG | + | chr7.2:49091046-49091065 | MS.gene022991:intron | 35.0% | |
TCAACATACTTTGACCAAAG+TGG | - | chr7.2:49091612-49091631 | None:intergenic | 35.0% | |
TCAACTTCTGAATCTTCAGT+TGG | - | chr7.2:49089871-49089890 | None:intergenic | 35.0% | |
TCAATGGTAACATGAAACCA+TGG | + | chr7.2:49091559-49091578 | MS.gene022991:CDS | 35.0% | |
TCTTACTGTCTAGGTTCAAA+TGG | + | chr7.2:49089165-49089184 | MS.gene022991:intron | 35.0% | |
TGAAGAATGCAGAAAAGTTG+TGG | - | chr7.2:49090798-49090817 | None:intergenic | 35.0% | |
TGATGACATAGTAGTTCAGA+AGG | + | chr7.2:49090498-49090517 | MS.gene022991:CDS | 35.0% | |
TGCAACTTAGGATACATTTC+TGG | - | chr7.2:49090460-49090479 | None:intergenic | 35.0% | |
TGGGTTATGGAAGATTGATA+TGG | + | chr7.2:49090528-49090547 | MS.gene022991:CDS | 35.0% | |
TTAACAAAGGCGAAAAAGCA+GGG | + | chr7.2:49089920-49089939 | MS.gene022991:CDS | 35.0% | |
TTGGTTATCAAAGGACTCTT+TGG | - | chr7.2:49089852-49089871 | None:intergenic | 35.0% | |
TTGTACTAGGATTCTGATGA+TGG | + | chr7.2:49089488-49089507 | MS.gene022991:intron | 35.0% | |
! | ACTTTTGGATCTTACTGTCT+AGG | + | chr7.2:49089156-49089175 | MS.gene022991:intron | 35.0% |
! | AGAACTATCACGGAACTTTT+CGG | + | chr7.2:49089694-49089713 | MS.gene022991:CDS | 35.0% |
! | AGCTCCCAAATTCATTTTGT+CGG | - | chr7.2:49090200-49090219 | None:intergenic | 35.0% |
!! | CATATTTGTTGTGTCCTTTG+TGG | - | chr7.2:49090383-49090402 | None:intergenic | 35.0% |
!! | GATTCTCTCTAGAACCATTT+AGG | + | chr7.2:49089197-49089216 | MS.gene022991:intron | 35.0% |
!! | TTCTGGGTTGGTTTAATTTG+AGG | + | chr7.2:49089111-49089130 | MS.gene022991:intron | 35.0% |
!! | TTGTTGTTGATGATGATGAG+AGG | - | chr7.2:49088963-49088982 | None:intergenic | 35.0% |
!!! | ATTTTTTTCTCCCGGGAAAT+AGG | + | chr7.2:49089038-49089057 | MS.gene022991:intron | 35.0% |
!!! | CGCAACTGTTTTTAAAACCT+TGG | - | chr7.2:49090906-49090925 | None:intergenic | 35.0% |
!!! | TGTCTTTTTTGTTTCTGGGT+TGG | + | chr7.2:49089099-49089118 | MS.gene022991:intron | 35.0% |
!!! | TTTTTTTCTCCCGGGAAATA+GGG | + | chr7.2:49089039-49089058 | MS.gene022991:intron | 35.0% |
AAATTAGGAACCTTACCACC+TGG | + | chr7.2:49091420-49091439 | MS.gene022991:CDS | 40.0% | |
ACATGCCATGATTTATCCAG+TGG | - | chr7.2:49091474-49091493 | None:intergenic | 40.0% | |
AGAGTGAAGAAGAAGGTGAA+GGG | - | chr7.2:49088881-49088900 | None:intergenic | 40.0% | |
AGCTGAGGATCATAAGTCTT+TGG | + | chr7.2:49089604-49089623 | MS.gene022991:CDS | 40.0% | |
CAATCTTCCATAACCCAGTA+AGG | - | chr7.2:49090525-49090544 | None:intergenic | 40.0% | |
CCTGAATTCTTCTTATGTGC+CGG | + | chr7.2:49090294-49090313 | MS.gene022991:CDS | 40.0% | |
CTGAAAAGATTCCTGTATCG+AGG | - | chr7.2:49089734-49089753 | None:intergenic | 40.0% | |
GAAGATTGATATGGATGGCA+AGG | + | chr7.2:49090537-49090556 | MS.gene022991:CDS | 40.0% | |
GATAGACAATGCAAGCTCTT+TGG | - | chr7.2:49089980-49089999 | None:intergenic | 40.0% | |
GCTTGCATTGTCTATCAATG+AGG | + | chr7.2:49089984-49090003 | MS.gene022991:CDS | 40.0% | |
GGATAAATCATGGCATGTTC+TGG | + | chr7.2:49091476-49091495 | MS.gene022991:CDS | 40.0% | |
GTATCATTACTGGCAGAATC+TGG | + | chr7.2:49090729-49090748 | MS.gene022991:CDS | 40.0% | |
GTCATTGCAATATCAAGCCA+TGG | - | chr7.2:49091579-49091598 | None:intergenic | 40.0% | |
GTGTTGTCAATCATTCATCG+CGG | - | chr7.2:49091101-49091120 | None:intergenic | 40.0% | |
GTTAACAAAGGCGAAAAAGC+AGG | + | chr7.2:49089919-49089938 | MS.gene022991:CDS | 40.0% | |
TAATCCAAAGGCTTGTGCAT+GGG | + | chr7.2:49090648-49090667 | MS.gene022991:CDS | 40.0% | |
TAGACGCATCAAACCCTAAA+TGG | - | chr7.2:49089214-49089233 | None:intergenic | 40.0% | |
TAGTTCAGAAGGACCTTACT+GGG | + | chr7.2:49090509-49090528 | MS.gene022991:CDS | 40.0% | |
TCAAATCACGATCGATATGG+TGG | - | chr7.2:49091169-49091188 | None:intergenic | 40.0% | |
TGAGATTAACAATGCAGCTG+TGG | + | chr7.2:49091530-49091549 | MS.gene022991:CDS | 40.0% | |
TTAATCCAAAGGCTTGTGCA+TGG | + | chr7.2:49090647-49090666 | MS.gene022991:CDS | 40.0% | |
TTACAATGGAGCTCACATTG+AGG | + | chr7.2:49090246-49090265 | MS.gene022991:CDS | 40.0% | |
TTATAACCCAAGCATCAGCA+TGG | + | chr7.2:49091506-49091525 | MS.gene022991:CDS | 40.0% | |
TTGTCTATCAATGAGGCTGA+TGG | + | chr7.2:49089991-49090010 | MS.gene022991:CDS | 40.0% | |
! | ATCTGTTCTGGCACTGAAAA+CGG | + | chr7.2:49089544-49089563 | MS.gene022991:CDS | 40.0% |
! | CGTCGAATTAGAGTTTGTTC+AGG | + | chr7.2:49091632-49091651 | MS.gene022991:CDS | 40.0% |
! | GGAGCTGTAGAAACATGTTT+TGG | + | chr7.2:49090565-49090584 | MS.gene022991:CDS | 40.0% |
! | GGATTTTCGCAGAACTATCA+CGG | + | chr7.2:49089684-49089703 | MS.gene022991:CDS | 40.0% |
! | TATGATCCTCAGCTTGCTTA+CGG | - | chr7.2:49089598-49089617 | None:intergenic | 40.0% |
! | TCGATCGTGATTTGAAACCT+TGG | + | chr7.2:49091174-49091193 | MS.gene022991:intron | 40.0% |
! | TGATTTGGATGCTTGGAGAA+GGG | + | chr7.2:49090690-49090709 | MS.gene022991:CDS | 40.0% |
! | TTGAGAGCTCAAAGCTTGTT+AGG | + | chr7.2:49089663-49089682 | MS.gene022991:CDS | 40.0% |
! | TTTGTTCAGGCCTGCAATTT+TGG | + | chr7.2:49091645-49091664 | MS.gene022991:CDS | 40.0% |
!! | GCAAGTGATGTTCAAGTTGA+AGG | + | chr7.2:49090222-49090241 | MS.gene022991:CDS | 40.0% |
!! | GCACAGAAGAGTATCATTAC+TGG | + | chr7.2:49090719-49090738 | MS.gene022991:CDS | 40.0% |
!! | TACTAGGATTCTGATGATGG+TGG | + | chr7.2:49089491-49089510 | MS.gene022991:intron | 40.0% |
!! | TTGATTTGGATGCTTGGAGA+AGG | + | chr7.2:49090689-49090708 | MS.gene022991:CDS | 40.0% |
AAATCACGACCCTATTTCCC+GGG | - | chr7.2:49089051-49089070 | None:intergenic | 45.0% | |
ACACTGATGCGACTACTATG+TGG | + | chr7.2:49091117-49091136 | MS.gene022991:intron | 45.0% | |
ACATGAAACACGTGCTTCCA+CGG | - | chr7.2:49090172-49090191 | None:intergenic | 45.0% | |
AGAAGGACCTTACTGGGTTA+TGG | + | chr7.2:49090515-49090534 | MS.gene022991:CDS | 45.0% | |
AGCGATGAGAGTGAAGAAGA+AGG | - | chr7.2:49088888-49088907 | None:intergenic | 45.0% | |
ATCTCATCCATGCTGATGCT+TGG | - | chr7.2:49091516-49091535 | None:intergenic | 45.0% | |
CAATGAGGCTGATGGAAGAA+CGG | + | chr7.2:49089999-49090018 | MS.gene022991:CDS | 45.0% | |
CCAATTGGAGAAGGAAGTGA+AGG | + | chr7.2:49089790-49089809 | MS.gene022991:CDS | 45.0% | |
CCCTCATCGATATACTTCTC+CGG | - | chr7.2:49090034-49090053 | None:intergenic | 45.0% | |
CCGGCACATAAGAAGAATTC+AGG | - | chr7.2:49090297-49090316 | None:intergenic | 45.0% | |
CCTTCACTTCCTTCTCCAAT+TGG | - | chr7.2:49089793-49089812 | None:intergenic | 45.0% | |
CGAAGCCACTGGATAAATCA+TGG | + | chr7.2:49091466-49091485 | MS.gene022991:CDS | 45.0% | |
CTCAGCAACAAAGAACGCAA+AGG | + | chr7.2:49090144-49090163 | MS.gene022991:CDS | 45.0% | |
CTGTCTAGGTTCAAATGGGT+CGG | + | chr7.2:49089170-49089189 | MS.gene022991:intron | 45.0% | |
GAAATCACGACCCTATTTCC+CGG | - | chr7.2:49089052-49089071 | None:intergenic | 45.0% | |
GAATTTCAAGATGCAGCCTC+TGG | - | chr7.2:49091252-49091271 | None:intergenic | 45.0% | |
GAGAGTGAAGAAGAAGGTGA+AGG | - | chr7.2:49088882-49088901 | None:intergenic | 45.0% | |
GATATGGATGGCAAGGTGAA+TGG | + | chr7.2:49090544-49090563 | MS.gene022991:CDS | 45.0% | |
GTAGTTCAGAAGGACCTTAC+TGG | + | chr7.2:49090508-49090527 | MS.gene022991:CDS | 45.0% | |
TCTCATCCATGCTGATGCTT+GGG | - | chr7.2:49091515-49091534 | None:intergenic | 45.0% | |
TCTTCAACTTCCGGAGGAAT+AGG | - | chr7.2:49090061-49090080 | None:intergenic | 45.0% | |
TGAAGAAGAAGGTGAAGGGT+CGG | - | chr7.2:49088877-49088896 | None:intergenic | 45.0% | |
TGACTCAGTTCAAGCCACTT+TGG | + | chr7.2:49091595-49091614 | MS.gene022991:CDS | 45.0% | |
TGAGTTAACCACAACAGACG+CGG | - | chr7.2:49090128-49090147 | None:intergenic | 45.0% | |
TGATGAGCAAACCTCGATAC+AGG | + | chr7.2:49089720-49089739 | MS.gene022991:CDS | 45.0% | |
TGGAGCTCACATTGAGGTTA+AGG | + | chr7.2:49090252-49090271 | MS.gene022991:CDS | 45.0% | |
TGTGATTAGACCAGGTGGTA+AGG | - | chr7.2:49091433-49091452 | None:intergenic | 45.0% | |
TTACTCAACAACGAAGCCAC+TGG | + | chr7.2:49091455-49091474 | MS.gene022991:CDS | 45.0% | |
TTAGGATCTTCAACTTCCGG+AGG | - | chr7.2:49090067-49090086 | None:intergenic | 45.0% | |
! | CCGGAGAAGTATATCGATGA+GGG | + | chr7.2:49090031-49090050 | MS.gene022991:CDS | 45.0% |
! | CGATCGATATGGTGGAAAGT+CGG | - | chr7.2:49091161-49091180 | None:intergenic | 45.0% |
! | CGGAGAAGTATATCGATGAG+GGG | + | chr7.2:49090032-49090051 | MS.gene022991:CDS | 45.0% |
! | CTCATGGATTTGACTCGACA+AGG | + | chr7.2:49089519-49089538 | MS.gene022991:CDS | 45.0% |
! | TCCGGAGAAGTATATCGATG+AGG | + | chr7.2:49090030-49090049 | MS.gene022991:CDS | 45.0% |
! | TGAGGAAAAATTTGGTGGGG+TGG | + | chr7.2:49089129-49089148 | MS.gene022991:intron | 45.0% |
! | TGCAGTCCCTGTTGATGAAT+CGG | + | chr7.2:49089760-49089779 | MS.gene022991:CDS | 45.0% |
!! | ATCACTAGCATTGGTTCCAG+AGG | + | chr7.2:49091233-49091252 | MS.gene022991:intron | 45.0% |
!! | GAACCACCGATTCATCAACA+GGG | - | chr7.2:49089769-49089788 | None:intergenic | 45.0% |
AAAACTACGCGCCAGGTGAT+TGG | + | chr7.2:49089821-49089840 | MS.gene022991:CDS | 50.0% | |
AAGGCTTGTGCATGGGCTTA+TGG | + | chr7.2:49090655-49090674 | MS.gene022991:CDS | 50.0% | |
ATCCTGAAGCGAGGAAAACG+AGG | - | chr7.2:49088854-49088873 | None:intergenic | 50.0% | |
CAAAGAACGCAAAGGAACCG+TGG | + | chr7.2:49090152-49090171 | MS.gene022991:CDS | 50.0% | |
CAAGCTCGAGAATGCCACAA+AGG | + | chr7.2:49090366-49090385 | MS.gene022991:CDS | 50.0% | |
CTCGACAAGGAGATCTGTTC+TGG | + | chr7.2:49089532-49089551 | MS.gene022991:CDS | 50.0% | |
GATTCCAGTTGTCGAAGGAC+CGG | - | chr7.2:49090316-49090335 | None:intergenic | 50.0% | |
GCAGCTGTGGTGCATTTCAA+TGG | + | chr7.2:49091543-49091562 | MS.gene022991:CDS | 50.0% | |
TAAGCCCATGCACAAGCCTT+TGG | - | chr7.2:49090655-49090674 | None:intergenic | 50.0% | |
TCAGATCCGTAAGCAAGCTG+AGG | + | chr7.2:49089589-49089608 | MS.gene022991:CDS | 50.0% | |
TGAATCGGTGGTTCGCCAAT+TGG | + | chr7.2:49089775-49089794 | MS.gene022991:CDS | 50.0% | |
TGGAGAAGGAAGTGAAGGAG+CGG | + | chr7.2:49089795-49089814 | MS.gene022991:CDS | 50.0% | |
TTACGGATCTGATCCAACCG+AGG | - | chr7.2:49089581-49089600 | None:intergenic | 50.0% | |
! | AGTCCCTGTTGATGAATCGG+TGG | + | chr7.2:49089763-49089782 | MS.gene022991:CDS | 50.0% |
! | ATCCTCGTTTTCCTCGCTTC+AGG | + | chr7.2:49088849-49088868 | MS.gene022991:CDS | 50.0% |
! | CTTTGGCTTCACCAATCACC+TGG | - | chr7.2:49089835-49089854 | None:intergenic | 50.0% |
!! | CGAACCACCGATTCATCAAC+AGG | - | chr7.2:49089770-49089789 | None:intergenic | 50.0% |
!! | GATGATGGTGGTGTTGCTCA+TGG | + | chr7.2:49089503-49089522 | MS.gene022991:CDS | 50.0% |
!! | GGAAGAACGGATTGCTCATC+CGG | + | chr7.2:49090012-49090031 | MS.gene022991:CDS | 50.0% |
!! | TAGCGGATTCCAGTTGTCGA+AGG | - | chr7.2:49090321-49090340 | None:intergenic | 50.0% |
!! | TCATGGCATGTTCTGGGACT+TGG | + | chr7.2:49091483-49091502 | MS.gene022991:CDS | 50.0% |
!!! | TGGTGGGGTGGTGTTACTTT+TGG | + | chr7.2:49089141-49089160 | MS.gene022991:intron | 50.0% |
AAACGGATCCGCTCAAGCCT+CGG | + | chr7.2:49089561-49089580 | MS.gene022991:CDS | 55.0% | |
GGTGGTTCGCCAATTGGAGA+AGG | + | chr7.2:49089781-49089800 | MS.gene022991:CDS | 55.0% | |
TGAGGGGAAGCCTATTCCTC+CGG | + | chr7.2:49090048-49090067 | MS.gene022991:CDS | 55.0% | |
TGATCCAACCGAGGCTTGAG+CGG | - | chr7.2:49089572-49089591 | None:intergenic | 55.0% | |
TGTTGTAGCCGCGTCTGTTG+TGG | + | chr7.2:49090117-49090136 | MS.gene022991:CDS | 55.0% | |
! | GCGGATTAAAACTACGCGCC+AGG | + | chr7.2:49089814-49089833 | MS.gene022991:CDS | 55.0% |
AAGGGTCGGATCCTGAAGCG+AGG | - | chr7.2:49088863-49088882 | None:intergenic | 60.0% | |
! | TGTGCCGGTCCTTCGACAAC+TGG | + | chr7.2:49090309-49090328 | MS.gene022991:CDS | 60.0% |
GGATCCGCTCAAGCCTCGGT+TGG | + | chr7.2:49089565-49089584 | MS.gene022991:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 49088842 | 49091674 | 49088842 | ID=MS.gene022991 |
chr7.2 | mRNA | 49088842 | 49091674 | 49088842 | ID=MS.gene022991.t1;Parent=MS.gene022991 |
chr7.2 | exon | 49088842 | 49088988 | 49088842 | ID=MS.gene022991.t1.exon1;Parent=MS.gene022991.t1 |
chr7.2 | CDS | 49088842 | 49088988 | 49088842 | ID=cds.MS.gene022991.t1;Parent=MS.gene022991.t1 |
chr7.2 | exon | 49089497 | 49090750 | 49089497 | ID=MS.gene022991.t1.exon2;Parent=MS.gene022991.t1 |
chr7.2 | CDS | 49089497 | 49090750 | 49089497 | ID=cds.MS.gene022991.t1;Parent=MS.gene022991.t1 |
chr7.2 | exon | 49091399 | 49091674 | 49091399 | ID=MS.gene022991.t1.exon3;Parent=MS.gene022991.t1 |
chr7.2 | CDS | 49091399 | 49091674 | 49091399 | ID=cds.MS.gene022991.t1;Parent=MS.gene022991.t1 |
Gene Sequence |
Protein sequence |