Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051724.t1 | RHN45785.1 | 98.9 | 560 | 4 | 1 | 1 | 558 | 1 | 560 | 0.00E+00 | 1086.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051724.t1 | Q9LSG3 | 82.5 | 544 | 87 | 3 | 15 | 558 | 24 | 559 | 3.6e-262 | 905.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051724.t1 | A0A396H3S3 | 98.9 | 560 | 4 | 1 | 1 | 558 | 1 | 560 | 0.0e+00 | 1086.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene051724 | 0.816215 | 6.20E-52 | -1.69E-46 |
| MS.gene050224 | MS.gene051724 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene051724 | 0.804898 | 1.73E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene051724 | 0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene052072 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene052307 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene052609 | 0.830394 | 3.01E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene053143 | 0.831396 | 1.71E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene056578 | 0.81074 | 9.92E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene061100 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene061707 | 0.801862 | 7.37E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene065593 | 0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene051724 | MS.gene066897 | 0.828413 | 9.12E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene06998 | 0.808983 | 2.37E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene072116 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene051724 | MS.gene07878 | 0.835403 | 1.71E-56 | -1.69E-46 |
| MS.gene051724 | MS.gene24076 | 0.835423 | 1.69E-56 | -1.69E-46 |
| MS.gene051724 | MS.gene27119 | 0.80844 | 3.09E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene27287 | 0.804638 | 1.96E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene27533 | 0.820811 | 5.63E-53 | -1.69E-46 |
| MS.gene051724 | MS.gene28924 | 0.814284 | 1.67E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene28979 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene32688 | 0.80127 | 9.74E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene35034 | 0.807966 | 3.90E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene36081 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene36285 | 0.83546 | 1.66E-56 | -1.69E-46 |
| MS.gene051724 | MS.gene36417 | 0.818224 | 2.19E-52 | -1.69E-46 |
| MS.gene051724 | MS.gene37011 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene37106 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene051724 | MS.gene39046 | 0.814047 | 1.88E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene39124 | 0.829286 | 5.61E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene41427 | 0.8137 | 2.24E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene42528 | 0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene42653 | 0.806972 | 6.34E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene42783 | 0.830507 | 2.82E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene44326 | 0.802795 | 4.73E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene46302 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene47601 | 0.846223 | 2.49E-59 | -1.69E-46 |
| MS.gene051724 | MS.gene49883 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene51028 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene51029 | 0.823507 | 1.33E-53 | -1.69E-46 |
| MS.gene051724 | MS.gene54158 | 0.807229 | 5.60E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene54547 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene051724 | MS.gene55094 | 0.830574 | 2.72E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene56746 | 0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene58134 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene59366 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene60300 | 0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene60399 | 0.81609 | 6.61E-52 | -1.69E-46 |
| MS.gene051724 | MS.gene63930 | 0.848422 | 6.19E-60 | -1.69E-46 |
| MS.gene051724 | MS.gene65300 | 0.825817 | 3.81E-54 | -1.69E-46 |
| MS.gene051724 | MS.gene67553 | 0.83131 | 1.80E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene67881 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene68360 | 0.825961 | 3.52E-54 | -1.69E-46 |
| MS.gene051724 | MS.gene74235 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene051724 | MS.gene74900 | 0.80809 | 3.67E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene76506 | 0.812168 | 4.85E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene79543 | 0.803774 | 2.97E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene80201 | 0.811464 | 6.91E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene85122 | 0.807432 | 5.07E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene85610 | 0.807923 | 3.99E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene87622 | 0.805356 | 1.39E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene88032 | 0.810755 | 9.84E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene88927 | 0.825058 | 5.77E-54 | -1.69E-46 |
| MS.gene051724 | MS.gene89100 | 0.815925 | 7.20E-52 | -1.69E-46 |
| MS.gene051724 | MS.gene90121 | 0.810257 | 1.26E-50 | -1.69E-46 |
| MS.gene051724 | MS.gene90778 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene051724 | MS.gene93728 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene051724 | MS.gene96690 | 0.8019 | 7.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051724 | MS.gene01533 | PPI |
| MS.gene004225 | MS.gene051724 | PPI |
| MS.gene051724 | MS.gene54329 | PPI |
| MS.gene01532 | MS.gene051724 | PPI |
| MS.gene002551 | MS.gene051724 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051724.t1 | MTR_7g055600 | 100.000 | 434 | 0 | 0 | 125 | 558 | 1 | 434 | 0.0 | 910 |
| MS.gene051724.t1 | MTR_7g057530 | 100.000 | 434 | 0 | 0 | 125 | 558 | 1 | 434 | 0.0 | 910 |
| MS.gene051724.t1 | MTR_6g016380 | 65.505 | 545 | 174 | 6 | 16 | 558 | 23 | 555 | 0.0 | 735 |
| MS.gene051724.t1 | MTR_7g075840 | 57.317 | 410 | 169 | 4 | 149 | 556 | 257 | 662 | 1.00e-158 | 468 |
| MS.gene051724.t1 | MTR_2g027740 | 54.015 | 411 | 179 | 5 | 149 | 556 | 262 | 665 | 1.10e-156 | 463 |
| MS.gene051724.t1 | MTR_3g107930 | 53.865 | 401 | 181 | 3 | 158 | 556 | 188 | 586 | 5.48e-155 | 456 |
| MS.gene051724.t1 | MTR_3g107930 | 53.865 | 401 | 181 | 3 | 158 | 556 | 265 | 663 | 6.03e-154 | 456 |
| MS.gene051724.t1 | MTR_8g033360 | 57.294 | 377 | 155 | 4 | 149 | 522 | 224 | 597 | 1.96e-148 | 444 |
| MS.gene051724.t1 | MTR_8g092000 | 49.640 | 417 | 201 | 3 | 142 | 557 | 171 | 579 | 8.62e-147 | 435 |
| MS.gene051724.t1 | MTR_2g015550 | 44.885 | 479 | 244 | 7 | 80 | 556 | 72 | 532 | 9.30e-147 | 433 |
| MS.gene051724.t1 | MTR_4g109890 | 42.210 | 552 | 277 | 11 | 12 | 554 | 14 | 532 | 1.63e-144 | 427 |
| MS.gene051724.t1 | MTR_2g461670 | 44.647 | 439 | 230 | 6 | 123 | 557 | 161 | 590 | 1.72e-129 | 391 |
| MS.gene051724.t1 | MTR_2g006790 | 40.625 | 480 | 239 | 9 | 80 | 556 | 72 | 508 | 7.74e-121 | 366 |
| MS.gene051724.t1 | MTR_2g082650 | 42.928 | 403 | 214 | 4 | 170 | 556 | 8 | 410 | 1.78e-115 | 348 |
| MS.gene051724.t1 | MTR_2g082650 | 42.118 | 425 | 226 | 6 | 152 | 556 | 115 | 539 | 4.12e-114 | 350 |
| MS.gene051724.t1 | MTR_7g012370 | 44.051 | 395 | 199 | 8 | 172 | 545 | 131 | 524 | 2.44e-110 | 340 |
| MS.gene051724.t1 | MTR_4g133570 | 42.748 | 393 | 209 | 4 | 180 | 556 | 70 | 462 | 3.30e-109 | 334 |
| MS.gene051724.t1 | MTR_6g013840 | 42.788 | 416 | 213 | 9 | 162 | 556 | 119 | 530 | 7.51e-100 | 312 |
| MS.gene051724.t1 | MTR_3g452360 | 39.108 | 381 | 209 | 7 | 190 | 554 | 4 | 377 | 3.25e-90 | 283 |
| MS.gene051724.t1 | MTR_3g452360 | 38.520 | 392 | 218 | 7 | 179 | 554 | 142 | 526 | 9.52e-90 | 286 |
| MS.gene051724.t1 | MTR_7g096160 | 33.603 | 494 | 256 | 9 | 106 | 556 | 188 | 652 | 9.52e-87 | 282 |
| MS.gene051724.t1 | MTR_1g070490 | 36.776 | 397 | 212 | 7 | 149 | 537 | 213 | 578 | 2.59e-78 | 259 |
| MS.gene051724.t1 | MTR_7g012370 | 43.590 | 312 | 156 | 7 | 172 | 464 | 131 | 441 | 1.72e-77 | 252 |
| MS.gene051724.t1 | MTR_4g133942 | 49.000 | 200 | 72 | 3 | 360 | 556 | 160 | 332 | 4.25e-57 | 194 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 218 | 562 | 7.87e-57 | 200 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 258 | 602 | 9.45e-57 | 201 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 278 | 622 | 1.32e-56 | 201 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 278 | 622 | 1.37e-56 | 201 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 298 | 642 | 1.76e-56 | 201 |
| MS.gene051724.t1 | MTR_7g074680 | 35.326 | 368 | 208 | 7 | 195 | 555 | 315 | 659 | 2.34e-56 | 201 |
| MS.gene051724.t1 | MTR_5g036580 | 25.776 | 322 | 197 | 9 | 234 | 543 | 65 | 356 | 7.55e-24 | 104 |
| MS.gene051724.t1 | MTR_4g118030 | 32.124 | 193 | 118 | 6 | 362 | 543 | 145 | 335 | 7.80e-23 | 100 |
| MS.gene051724.t1 | MTR_3g092310 | 30.526 | 190 | 124 | 5 | 362 | 543 | 140 | 329 | 1.85e-22 | 99.4 |
| MS.gene051724.t1 | MTR_7g094230 | 30.857 | 175 | 116 | 3 | 362 | 531 | 151 | 325 | 6.34e-22 | 97.8 |
| MS.gene051724.t1 | MTR_6g008900 | 30.000 | 200 | 125 | 7 | 338 | 528 | 146 | 339 | 8.96e-21 | 94.7 |
| MS.gene051724.t1 | MTR_4g071620 | 30.000 | 200 | 125 | 7 | 338 | 528 | 146 | 339 | 8.96e-21 | 94.7 |
| MS.gene051724.t1 | MTR_7g109210 | 25.786 | 318 | 188 | 11 | 233 | 539 | 61 | 341 | 2.07e-20 | 93.6 |
| MS.gene051724.t1 | MTR_3g111600 | 27.778 | 198 | 134 | 5 | 362 | 550 | 80 | 277 | 4.03e-18 | 85.1 |
| MS.gene051724.t1 | MTR_1g021855 | 29.648 | 199 | 130 | 6 | 362 | 550 | 165 | 363 | 2.59e-17 | 84.3 |
| MS.gene051724.t1 | MTR_5g019220 | 28.643 | 199 | 133 | 6 | 362 | 551 | 166 | 364 | 2.26e-16 | 81.3 |
| MS.gene051724.t1 | MTR_8g078240 | 26.866 | 201 | 136 | 6 | 362 | 551 | 142 | 342 | 1.15e-15 | 79.0 |
| MS.gene051724.t1 | MTR_1g089820 | 30.286 | 175 | 117 | 4 | 362 | 531 | 154 | 328 | 6.57e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051724.t1 | AT3G25140 | 87.879 | 495 | 60 | 0 | 64 | 558 | 65 | 559 | 0.0 | 929 |
| MS.gene051724.t1 | AT3G02350 | 68.373 | 547 | 163 | 4 | 15 | 558 | 22 | 561 | 0.0 | 753 |
| MS.gene051724.t1 | AT3G61130 | 53.437 | 451 | 200 | 6 | 110 | 556 | 227 | 671 | 4.71e-170 | 498 |
| MS.gene051724.t1 | AT5G47780 | 53.349 | 418 | 189 | 3 | 141 | 557 | 203 | 615 | 1.40e-159 | 469 |
| MS.gene051724.t1 | AT4G38270 | 54.476 | 391 | 175 | 2 | 169 | 556 | 284 | 674 | 1.39e-152 | 453 |
| MS.gene051724.t1 | AT4G38270 | 54.476 | 391 | 175 | 2 | 169 | 556 | 288 | 678 | 1.88e-152 | 453 |
| MS.gene051724.t1 | AT1G18580 | 48.649 | 407 | 201 | 5 | 152 | 554 | 132 | 534 | 2.59e-143 | 424 |
| MS.gene051724.t1 | AT2G46480 | 49.880 | 415 | 204 | 3 | 142 | 554 | 124 | 536 | 3.29e-142 | 422 |
| MS.gene051724.t1 | AT2G46480 | 49.880 | 415 | 204 | 3 | 142 | 554 | 137 | 549 | 5.41e-142 | 422 |
| MS.gene051724.t1 | AT2G20810 | 45.106 | 470 | 241 | 9 | 97 | 556 | 73 | 535 | 3.60e-133 | 399 |
| MS.gene051724.t1 | AT2G46480 | 46.506 | 415 | 193 | 4 | 142 | 554 | 124 | 511 | 1.70e-126 | 380 |
| MS.gene051724.t1 | AT2G46480 | 46.506 | 415 | 193 | 4 | 142 | 554 | 137 | 524 | 4.36e-126 | 380 |
| MS.gene051724.t1 | AT5G54690 | 41.256 | 446 | 235 | 6 | 137 | 556 | 88 | 532 | 8.63e-114 | 348 |
| MS.gene051724.t1 | AT3G01040 | 44.643 | 392 | 195 | 7 | 186 | 556 | 140 | 530 | 2.51e-107 | 332 |
| MS.gene051724.t1 | AT3G01040 | 44.643 | 392 | 195 | 7 | 186 | 556 | 140 | 530 | 2.51e-107 | 332 |
| MS.gene051724.t1 | AT5G15470 | 44.304 | 395 | 192 | 8 | 186 | 556 | 140 | 530 | 2.90e-105 | 327 |
| MS.gene051724.t1 | AT1G06780 | 40.238 | 420 | 219 | 5 | 142 | 556 | 208 | 600 | 7.14e-99 | 312 |
| MS.gene051724.t1 | AT1G06780 | 40.238 | 420 | 219 | 5 | 142 | 556 | 195 | 587 | 7.84e-99 | 311 |
| MS.gene051724.t1 | AT3G01040 | 42.636 | 387 | 177 | 9 | 186 | 556 | 140 | 497 | 6.92e-95 | 298 |
| MS.gene051724.t1 | AT2G30575 | 38.480 | 421 | 224 | 5 | 142 | 556 | 217 | 608 | 4.36e-94 | 300 |
| MS.gene051724.t1 | AT3G58790 | 34.829 | 468 | 258 | 11 | 123 | 554 | 80 | 536 | 4.84e-84 | 271 |
| MS.gene051724.t1 | AT3G58790 | 37.688 | 398 | 215 | 9 | 181 | 554 | 16 | 404 | 3.22e-83 | 265 |
| MS.gene051724.t1 | AT2G38650 | 32.091 | 483 | 286 | 11 | 76 | 555 | 173 | 616 | 9.48e-60 | 209 |
| MS.gene051724.t1 | AT2G38650 | 32.091 | 483 | 286 | 11 | 76 | 555 | 173 | 616 | 9.48e-60 | 209 |
| MS.gene051724.t1 | AT2G38650 | 31.714 | 391 | 226 | 10 | 76 | 464 | 173 | 524 | 9.51e-38 | 146 |
| MS.gene051724.t1 | AT1G70090 | 25.321 | 312 | 191 | 10 | 244 | 543 | 78 | 359 | 3.87e-22 | 99.0 |
| MS.gene051724.t1 | AT1G70090 | 25.321 | 312 | 191 | 10 | 244 | 543 | 78 | 359 | 3.87e-22 | 99.0 |
| MS.gene051724.t1 | AT3G06260 | 29.167 | 192 | 124 | 5 | 362 | 543 | 150 | 339 | 5.29e-22 | 98.2 |
| MS.gene051724.t1 | AT3G62660 | 28.507 | 221 | 144 | 7 | 332 | 543 | 138 | 353 | 9.89e-22 | 97.4 |
| MS.gene051724.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.80e-21 | 96.3 |
| MS.gene051724.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.80e-21 | 96.3 |
| MS.gene051724.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 362 | 543 | 150 | 339 | 1.80e-21 | 96.3 |
| MS.gene051724.t1 | AT1G24170 | 24.359 | 312 | 194 | 9 | 244 | 543 | 81 | 362 | 5.79e-21 | 95.5 |
| MS.gene051724.t1 | AT1G02720 | 27.354 | 223 | 148 | 7 | 330 | 543 | 137 | 354 | 2.74e-20 | 93.2 |
| MS.gene051724.t1 | AT1G02720 | 27.354 | 223 | 148 | 7 | 330 | 543 | 137 | 354 | 2.74e-20 | 93.2 |
| MS.gene051724.t1 | AT3G28340 | 27.315 | 216 | 142 | 7 | 338 | 543 | 136 | 346 | 9.04e-20 | 91.7 |
| MS.gene051724.t1 | AT1G19300 | 27.638 | 199 | 135 | 6 | 362 | 551 | 150 | 348 | 6.31e-17 | 82.8 |
| MS.gene051724.t1 | AT1G13250 | 28.947 | 190 | 127 | 4 | 362 | 543 | 144 | 333 | 7.48e-16 | 79.7 |
| MS.gene051724.t1 | AT3G50760 | 28.079 | 203 | 134 | 7 | 360 | 550 | 134 | 336 | 8.66e-14 | 73.2 |
Find 128 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAATGGACAAATATTT+AGG | 0.200677 | 7.3:-49959911 | None:intergenic |
| TGCAACTTAGGATACATTTC+TGG | 0.227262 | 7.3:-49959953 | None:intergenic |
| TGGAATGAATTTCTTTGATT+TGG | 0.245500 | 7.3:+49960171 | MS.gene051724:CDS |
| GGATAAATCATGGCATGTTC+TGG | 0.257545 | 7.3:+49960972 | MS.gene051724:CDS |
| AAGGCTTGTGCATGGGCTTA+TGG | 0.278045 | 7.3:+49960151 | MS.gene051724:CDS |
| TTGGTTATCAAAGGACTCTT+TGG | 0.286762 | 7.3:-49959345 | None:intergenic |
| TTGAGAGCTCAAAGCTTGTT+AGG | 0.321140 | 7.3:+49959159 | MS.gene051724:CDS |
| CCTTCACTTCCTTCTCCAAT+TGG | 0.322458 | 7.3:-49959286 | None:intergenic |
| TTTGTTCAGGCCTGCAATTT+TGG | 0.332215 | 7.3:+49961141 | MS.gene051724:CDS |
| GATAGACAATGCAAGCTCTT+TGG | 0.334367 | 7.3:-49959473 | None:intergenic |
| AACCGAACATTATGGAAATT+AGG | 0.336481 | 7.3:+49960901 | MS.gene051724:CDS |
| AGAAGGACCTTACTGGGTTA+TGG | 0.339063 | 7.3:+49960011 | MS.gene051724:CDS |
| ATCTCATCCATGCTGATGCT+TGG | 0.340802 | 7.3:-49961009 | None:intergenic |
| GTAGTTCAGAAGGACCTTAC+TGG | 0.354782 | 7.3:+49960004 | MS.gene051724:CDS |
| GAATCTCAAATGATTCAAAA+TGG | 0.356380 | 7.3:-49959924 | None:intergenic |
| TCTTCAACTTCCGGAGGAAT+AGG | 0.356969 | 7.3:-49959554 | None:intergenic |
| CATATTTGTTGTGTCCTTTG+TGG | 0.362763 | 7.3:-49959876 | None:intergenic |
| AGATTAGGATCTTCAACTTC+CGG | 0.365183 | 7.3:-49959563 | None:intergenic |
| GGAGCTGTAGAAACATGTTT+TGG | 0.370276 | 7.3:+49960061 | MS.gene051724:CDS |
| GGAAGAACGGATTGCTCATC+CGG | 0.375549 | 7.3:+49959508 | MS.gene051724:CDS |
| TAAGCCCATGCACAAGCCTT+TGG | 0.378231 | 7.3:-49960148 | None:intergenic |
| AGCTGAGGATCATAAGTCTT+TGG | 0.384718 | 7.3:+49959100 | MS.gene051724:CDS |
| TTAAATTTAGCTTTGATCAA+TGG | 0.385570 | 7.3:-49960124 | None:intergenic |
| TCATGGCATGTTCTGGGACT+TGG | 0.390308 | 7.3:+49960979 | MS.gene051724:CDS |
| ATCTGTCTTGGCACTGAAAA+CGG | 0.392593 | 7.3:+49959040 | MS.gene051724:CDS |
| AATAAAACTTTATGCAACTT+AGG | 0.395523 | 7.3:-49959965 | None:intergenic |
| CCGGCACATAAGAAGAATTC+AGG | 0.397017 | 7.3:-49959790 | None:intergenic |
| ACACAACAAATATGAAGTTC+AGG | 0.398619 | 7.3:+49959885 | MS.gene051724:CDS |
| TTCCTAATTTCCATAATGTT+CGG | 0.408121 | 7.3:-49960903 | None:intergenic |
| TGTAACCGACAAGATGAATC+TGG | 0.408758 | 7.3:+49959688 | MS.gene051724:CDS |
| CGTCGAATTAGAGTTTGTTC+AGG | 0.411356 | 7.3:+49961128 | MS.gene051724:CDS |
| GCAAGTGATGTTCAAGTTGA+AGG | 0.415890 | 7.3:+49959718 | MS.gene051724:CDS |
| TGAATCGGTGGTTCGCCAAT+TGG | 0.416083 | 7.3:+49959271 | MS.gene051724:CDS |
| TGTGCCGGTCCTTCGACAAC+TGG | 0.417437 | 7.3:+49959805 | MS.gene051724:CDS |
| CTCATGGATTCGACGCGATA+AGG | 0.420262 | 7.3:+49959015 | MS.gene051724:CDS |
| TGGAGCTCACATTGAGGTTA+AGG | 0.431929 | 7.3:+49959748 | MS.gene051724:CDS |
| TCTCATCCATGCTGATGCTT+GGG | 0.432230 | 7.3:-49961008 | None:intergenic |
| TATGATCCTCAGCTTGCTTA+CGG | 0.432749 | 7.3:-49959091 | None:intergenic |
| GCACAGAAGAGTATCATTAC+TGG | 0.434927 | 7.3:+49960215 | MS.gene051724:CDS |
| GTATCATTACTGGCAGAATC+TGG | 0.437903 | 7.3:+49960225 | MS.gene051724:CDS |
| TGGGTTATGGAAGATTGATA+TGG | 0.454907 | 7.3:+49960024 | MS.gene051724:CDS |
| AGAATGAGAACCGAACATTA+TGG | 0.455370 | 7.3:+49960893 | MS.gene051724:intron |
| GATAAATCATGGCATGTTCT+GGG | 0.458932 | 7.3:+49960973 | MS.gene051724:CDS |
| TGATGAGCAAACCTCGATAC+AGG | 0.462445 | 7.3:+49959216 | MS.gene051724:CDS |
| CGAACCACCGATTCATCAAC+AGG | 0.463334 | 7.3:-49959263 | None:intergenic |
| ATTTCTTTGATTTGGATGCT+TGG | 0.467532 | 7.3:+49960179 | MS.gene051724:CDS |
| GTTAACGAAGGCGAAGAAGC+AGG | 0.471355 | 7.3:+49959415 | MS.gene051724:CDS |
| AAAACTACACGCCAGGTGAT+TGG | 0.474929 | 7.3:+49959317 | MS.gene051724:CDS |
| TCTCAAAGTAAAATTTCTGC+AGG | 0.482721 | 7.3:-49959838 | None:intergenic |
| AGCTCCCAGATTCATCTTGT+CGG | 0.483406 | 7.3:-49959693 | None:intergenic |
| TGACTCAGTTCAAGCCACTT+TGG | 0.487442 | 7.3:+49961091 | MS.gene051724:CDS |
| CCTGAATTCTTCTTATGTGC+CGG | 0.493252 | 7.3:+49959790 | MS.gene051724:CDS |
| AAGGCGTAGTGATATAGATT+AGG | 0.494787 | 7.3:-49959578 | None:intergenic |
| CCCTCATCGATATACTTCTC+CGG | 0.501384 | 7.3:-49959527 | None:intergenic |
| GTAAAATTTCTGCAGGTTAG+CGG | 0.505828 | 7.3:-49959831 | None:intergenic |
| CGCGATAAGGAGATCTGTCT+TGG | 0.511684 | 7.3:+49959028 | MS.gene051724:CDS |
| GATATGGATGGCAAGGTGAA+TGG | 0.512206 | 7.3:+49960040 | MS.gene051724:CDS |
| TCATCATCAACAACAAAACT+TGG | 0.513077 | 7.3:+49958510 | MS.gene051724:CDS |
| TGCAGTTCCTGTTGATGAAT+CGG | 0.514874 | 7.3:+49959256 | MS.gene051724:CDS |
| TCAACTTCTGAATCTTCAGT+TGG | 0.515653 | 7.3:-49959364 | None:intergenic |
| CAATCTTCCATAACCCAGTA+AGG | 0.515757 | 7.3:-49960018 | None:intergenic |
| TTGATTTGGATGCTTGGAGA+AGG | 0.516586 | 7.3:+49960185 | MS.gene051724:CDS |
| AGCGATGAGAGTGAAGAAGA+AGG | 0.517885 | 7.3:-49958425 | None:intergenic |
| AATCTTCAGTTGGTTATCAA+AGG | 0.522682 | 7.3:-49959354 | None:intergenic |
| ACATGAAACACGTGCTTCCA+CGG | 0.525426 | 7.3:-49959665 | None:intergenic |
| TCTGATGGTGATGTTGCTCA+TGG | 0.526484 | 7.3:+49958999 | MS.gene051724:CDS |
| AGAGTGAAGAAGAAGGTGAA+GGG | 0.527247 | 7.3:-49958418 | None:intergenic |
| CTTTGGCTTCACCAATCACC+TGG | 0.531350 | 7.3:-49959328 | None:intergenic |
| CAAAGCTAAATTTAATCCAA+AGG | 0.531952 | 7.3:+49960132 | MS.gene051724:CDS |
| CGAAGCCACTGGATAAATCA+TGG | 0.532470 | 7.3:+49960962 | MS.gene051724:CDS |
| TGAAGAAGAAGGTGAAGGGT+CGG | 0.533434 | 7.3:-49958414 | None:intergenic |
| TAATCCAAAGGCTTGTGCAT+GGG | 0.540043 | 7.3:+49960144 | MS.gene051724:CDS |
| TGTGATTAGACCAGGTGGTA+AGG | 0.540072 | 7.3:-49960926 | None:intergenic |
| TAGTTCAGAAGGACCTTACT+GGG | 0.540114 | 7.3:+49960005 | MS.gene051724:CDS |
| AAACGGATCCGCTCAAGCCT+CGG | 0.542028 | 7.3:+49959057 | MS.gene051724:CDS |
| TTACTCAACAACGAAGCCAC+TGG | 0.544084 | 7.3:+49960951 | MS.gene051724:CDS |
| TTAATCCAAAGGCTTGTGCA+TGG | 0.545140 | 7.3:+49960143 | MS.gene051724:CDS |
| ACTGAAGATTCAGAAGTTGA+AGG | 0.545368 | 7.3:+49959367 | MS.gene051724:CDS |
| GATTCCAGTTGTCGAAGGAC+CGG | 0.548394 | 7.3:-49959809 | None:intergenic |
| TGAGGGGAAGCCTATTCCTC+CGG | 0.553826 | 7.3:+49959544 | MS.gene051724:CDS |
| TTATGTATGCTTCTTATGCA+CGG | 0.558063 | 7.3:+49959126 | MS.gene051724:CDS |
| CCGGAGAAGTATATCGATGA+GGG | 0.559275 | 7.3:+49959527 | MS.gene051724:CDS |
| TACAACATTGTCAGAGAACA+AGG | 0.567266 | 7.3:-49959597 | None:intergenic |
| TCAACATACTTTGACCAAAG+TGG | 0.568135 | 7.3:-49961105 | None:intergenic |
| GGATCCGCTCAAGCCTCGGT+TGG | 0.571619 | 7.3:+49959061 | MS.gene051724:CDS |
| CTGAAAAGATTCCTGTATCG+AGG | 0.573931 | 7.3:-49959227 | None:intergenic |
| GCGGATTAAAACTACACGCC+AGG | 0.575337 | 7.3:+49959310 | MS.gene051724:CDS |
| TGATTTGGATGCTTGGAGAA+GGG | 0.576059 | 7.3:+49960186 | MS.gene051724:CDS |
| ATCCTAAAGCGAGGAAAACG+AGG | 0.577104 | 7.3:-49958391 | None:intergenic |
| TGTTGTAGCCGCCTCTGTTG+TGG | 0.577299 | 7.3:+49959613 | MS.gene051724:CDS |
| GAGAGTGAAGAAGAAGGTGA+AGG | 0.579310 | 7.3:-49958419 | None:intergenic |
| GTCATTGCAATATCAAGCCA+TGG | 0.583682 | 7.3:-49961072 | None:intergenic |
| GGTGGTTCGCCAATTGGAGA+AGG | 0.584225 | 7.3:+49959277 | MS.gene051724:CDS |
| TGATCCAACCGAGGCTTGAG+CGG | 0.585144 | 7.3:-49959065 | None:intergenic |
| GCAGCTGTGGTGCATTTCAA+TGG | 0.586460 | 7.3:+49961039 | MS.gene051724:CDS |
| TAGCGGATTCCAGTTGTCGA+AGG | 0.589025 | 7.3:-49959814 | None:intergenic |
| TTGTCTATCAATGAGGCTGA+TGG | 0.589221 | 7.3:+49959487 | MS.gene051724:CDS |
| ACATGCCATGATTTATCCAG+TGG | 0.592945 | 7.3:-49960967 | None:intergenic |
| TGATGACATAGTAGTTCAGA+AGG | 0.594090 | 7.3:+49959994 | MS.gene051724:CDS |
| GTAACCGACAAGATGAATCT+GGG | 0.594636 | 7.3:+49959689 | MS.gene051724:CDS |
| CAATGAGGCTGATGGAAGAA+CGG | 0.596479 | 7.3:+49959495 | MS.gene051724:CDS |
| CAAAGAACGCAAAGGAACCG+TGG | 0.597241 | 7.3:+49959648 | MS.gene051724:CDS |
| TTAACGAAGGCGAAGAAGCA+GGG | 0.598828 | 7.3:+49959416 | MS.gene051724:CDS |
| CCAATTGGAGAAGGAAGTGA+AGG | 0.618745 | 7.3:+49959286 | MS.gene051724:CDS |
| GAAGATTGATATGGATGGCA+AGG | 0.619645 | 7.3:+49960033 | MS.gene051724:CDS |
| TTCAAGTTGAAGGATTACAA+TGG | 0.630042 | 7.3:+49959728 | MS.gene051724:CDS |
| TTATGGAAGATTGATATGGA+TGG | 0.639037 | 7.3:+49960028 | MS.gene051724:CDS |
| CAAGCTCGAGAATGCCACAA+AGG | 0.639830 | 7.3:+49959862 | MS.gene051724:CDS |
| TGGAGAAGGAAGTGAAGGAG+CGG | 0.641149 | 7.3:+49959291 | MS.gene051724:CDS |
| TTACAATGGAGCTCACATTG+AGG | 0.641182 | 7.3:+49959742 | MS.gene051724:CDS |
| TCAATGGTAACATGAAACCA+TGG | 0.644737 | 7.3:+49961055 | MS.gene051724:CDS |
| TTATAACCCAAGCATCAGCA+TGG | 0.655654 | 7.3:+49961002 | MS.gene051724:CDS |
| AAATTAGGAACCTTACCACC+TGG | 0.658960 | 7.3:+49960916 | MS.gene051724:CDS |
| TTAGGATCTTCAACTTCCGG+AGG | 0.659224 | 7.3:-49959560 | None:intergenic |
| TGAGATTAACAATGCAGCTG+TGG | 0.662585 | 7.3:+49961026 | MS.gene051724:CDS |
| TCCGGAGAAGTATATCGATG+AGG | 0.662744 | 7.3:+49959526 | MS.gene051724:CDS |
| CTCAGCAACAAAGAACGCAA+AGG | 0.669841 | 7.3:+49959640 | MS.gene051724:CDS |
| GCTTGCATTGTCTATCAATG+AGG | 0.670067 | 7.3:+49959480 | MS.gene051724:CDS |
| GAGTAATATGTGATTAGACC+AGG | 0.674075 | 7.3:-49960934 | None:intergenic |
| TCAGATCCGTAAGCAAGCTG+AGG | 0.675215 | 7.3:+49959085 | MS.gene051724:CDS |
| CGGAGAAGTATATCGATGAG+GGG | 0.679947 | 7.3:+49959528 | MS.gene051724:CDS |
| TGAGTTAACCACAACAGAGG+CGG | 0.682973 | 7.3:-49959621 | None:intergenic |
| TAATATGTGATTAGACCAGG+TGG | 0.684716 | 7.3:-49960931 | None:intergenic |
| TGCTGAGTTAACCACAACAG+AGG | 0.688695 | 7.3:-49959624 | None:intergenic |
| AGTTCCTGTTGATGAATCGG+TGG | 0.690425 | 7.3:+49959259 | MS.gene051724:CDS |
| TTACGGATCTGATCCAACCG+AGG | 0.699692 | 7.3:-49959074 | None:intergenic |
| TGTAAATGAGCAGTTAACGA+AGG | 0.714646 | 7.3:+49959403 | MS.gene051724:CDS |
| AAGGGTCGGATCCTAAAGCG+AGG | 0.720797 | 7.3:-49958400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGCATTTCTATTTAAAA+TGG | - | chr7.3:49960834-49960853 | None:intergenic | 15.0% |
| !! | AATAAAACTTTATGCAACTT+AGG | - | chr7.3:49959968-49959987 | None:intergenic | 20.0% |
| !! | ACATATCATGTTATAATACA+TGG | - | chr7.3:49960861-49960880 | None:intergenic | 20.0% |
| !! | TTCAAAATGGACAAATATTT+AGG | - | chr7.3:49959914-49959933 | None:intergenic | 20.0% |
| !! | TTGTTTGTTTAATATGTAAC+TGG | + | chr7.3:49958912-49958931 | MS.gene051724:intron | 20.0% |
| !!! | AATTTTGCATTTCTTCTTTT+TGG | + | chr7.3:49958785-49958804 | MS.gene051724:intron | 20.0% |
| !!! | ATTTTGCATTTCTTCTTTTT+GGG | + | chr7.3:49958786-49958805 | MS.gene051724:intron | 20.0% |
| !!! | ATTTTTGACTTTTTTGTTTC+TGG | + | chr7.3:49958616-49958635 | MS.gene051724:intron | 20.0% |
| !!! | GTTGCATAAAGTTTTATTTT+TGG | + | chr7.3:49959970-49959989 | MS.gene051724:CDS | 20.0% |
| !!! | GTTTAATTTGAGGAAAAATT+TGG | + | chr7.3:49958643-49958662 | MS.gene051724:intron | 20.0% |
| !!! | TTAAATTTAGCTTTGATCAA+TGG | - | chr7.3:49960127-49960146 | None:intergenic | 20.0% |
| !!! | TTATTAACAATCTAAAACCT+AGG | - | chr7.3:49960347-49960366 | None:intergenic | 20.0% |
| !!! | TTATTTTCTGATTTTTTTCC+CGG | + | chr7.3:49958551-49958570 | MS.gene051724:intron | 20.0% |
| !!! | TTGGGTAACAAATATTTTTA+AGG | + | chr7.3:49958884-49958903 | MS.gene051724:intron | 20.0% |
| !!! | TTTTTGACTTTTTTGTTTCT+GGG | + | chr7.3:49958617-49958636 | MS.gene051724:intron | 20.0% |
| ! | AATTTGAGGAAAAATTTGGT+GGG | + | chr7.3:49958647-49958666 | MS.gene051724:intron | 25.0% |
| ! | ATAGTAGTAAATACAATCCT+AGG | + | chr7.3:49960327-49960346 | MS.gene051724:intron | 25.0% |
| ! | CAAAGCTAAATTTAATCCAA+AGG | + | chr7.3:49960132-49960151 | MS.gene051724:CDS | 25.0% |
| ! | GAATCTCAAATGATTCAAAA+TGG | - | chr7.3:49959927-49959946 | None:intergenic | 25.0% |
| ! | GTGGTAAATAATACAAGAAT+AGG | - | chr7.3:49960275-49960294 | None:intergenic | 25.0% |
| ! | TAATTTGAGGAAAAATTTGG+TGG | + | chr7.3:49958646-49958665 | MS.gene051724:intron | 25.0% |
| ! | TGGAATGAATTTCTTTGATT+TGG | + | chr7.3:49960171-49960190 | MS.gene051724:CDS | 25.0% |
| ! | TGTTTAATATGTAACTGGAA+AGG | + | chr7.3:49958917-49958936 | MS.gene051724:intron | 25.0% |
| ! | TTCCTAATTTCCATAATGTT+CGG | - | chr7.3:49960906-49960925 | None:intergenic | 25.0% |
| !! | TGTTATTATGCTTTTGTACT+AGG | + | chr7.3:49958974-49958993 | MS.gene051724:intron | 25.0% |
| !! | TTTAAAACCTTGGTATCAAT+AGG | - | chr7.3:49960392-49960411 | None:intergenic | 25.0% |
| !!! | TATTTTCTGATTTTTTTCCC+GGG | + | chr7.3:49958552-49958571 | MS.gene051724:intron | 25.0% |
| !!! | TCATTTTAAAGTATCAACCA+AGG | - | chr7.3:49960690-49960709 | None:intergenic | 25.0% |
| AACCGAACATTATGGAAATT+AGG | + | chr7.3:49960901-49960920 | MS.gene051724:CDS | 30.0% | |
| AATCATCATATCACTAGCAT+TGG | + | chr7.3:49960720-49960739 | MS.gene051724:intron | 30.0% | |
| AATCTTCAGTTGGTTATCAA+AGG | - | chr7.3:49959357-49959376 | None:intergenic | 30.0% | |
| ACACAACAAATATGAAGTTC+AGG | + | chr7.3:49959885-49959904 | MS.gene051724:CDS | 30.0% | |
| GTATCAATAGGAAACAAACA+GGG | - | chr7.3:49960380-49960399 | None:intergenic | 30.0% | |
| TCATCATCAACAACAAAACT+TGG | + | chr7.3:49958510-49958529 | MS.gene051724:CDS | 30.0% | |
| TCTCAAAGTAAAATTTCTGC+AGG | - | chr7.3:49959841-49959860 | None:intergenic | 30.0% | |
| TTATGGAAGATTGATATGGA+TGG | + | chr7.3:49960028-49960047 | MS.gene051724:CDS | 30.0% | |
| TTATGTATGCTTCTTATGCA+CGG | + | chr7.3:49959126-49959145 | MS.gene051724:CDS | 30.0% | |
| TTTCTCGGAAGTAACTAAAA+TGG | + | chr7.3:49958760-49958779 | MS.gene051724:intron | 30.0% | |
| TTTGTTTCCTATTGATACCA+AGG | + | chr7.3:49960382-49960401 | MS.gene051724:intron | 30.0% | |
| ! | TTTTCAACTAGGATGATGTT+TGG | + | chr7.3:49958853-49958872 | MS.gene051724:intron | 30.0% |
| !! | ATGATGTTTGGTGATTTTGT+TGG | + | chr7.3:49958865-49958884 | MS.gene051724:intron | 30.0% |
| !! | ATTTCTTTGATTTGGATGCT+TGG | + | chr7.3:49960179-49960198 | MS.gene051724:CDS | 30.0% |
| !! | TGATGTTTGGTGATTTTGTT+GGG | + | chr7.3:49958866-49958885 | MS.gene051724:intron | 30.0% |
| !! | TGTTGTTGTGTTTTTCAACT+AGG | + | chr7.3:49958842-49958861 | MS.gene051724:intron | 30.0% |
| !! | TTCAAGTTGAAGGATTACAA+TGG | + | chr7.3:49959728-49959747 | MS.gene051724:CDS | 30.0% |
| !!! | ATTCTCTCTGAAACCATTTT+AGG | + | chr7.3:49958720-49958739 | MS.gene051724:intron | 30.0% |
| !!! | TTCTCTCTGAAACCATTTTA+GGG | + | chr7.3:49958721-49958740 | MS.gene051724:intron | 30.0% |
| AACCTAGCTACATCAAATCA+AGG | - | chr7.3:49958818-49958837 | None:intergenic | 35.0% | |
| AAGGCGTAGTGATATAGATT+AGG | - | chr7.3:49959581-49959600 | None:intergenic | 35.0% | |
| ACTATGTACTTAATCGCGTA+TGG | - | chr7.3:49960504-49960523 | None:intergenic | 35.0% | |
| ACTGAAGATTCAGAAGTTGA+AGG | + | chr7.3:49959367-49959386 | MS.gene051724:CDS | 35.0% | |
| AGAATGAGAACCGAACATTA+TGG | + | chr7.3:49960893-49960912 | MS.gene051724:intron | 35.0% | |
| AGATTAGGATCTTCAACTTC+CGG | - | chr7.3:49959566-49959585 | None:intergenic | 35.0% | |
| AGCAACGATATAACACTGTA+GGG | + | chr7.3:49960543-49960562 | MS.gene051724:intron | 35.0% | |
| AGGAAACAAACAGGGTTAAA+CGG | - | chr7.3:49960372-49960391 | None:intergenic | 35.0% | |
| CTTACTGTCTAGGTTCAAAT+GGG | + | chr7.3:49958688-49958707 | MS.gene051724:intron | 35.0% | |
| GAGAATAAGACTAGCATACA+TGG | - | chr7.3:49960789-49960808 | None:intergenic | 35.0% | |
| GAGTAATATGTGATTAGACC+AGG | - | chr7.3:49960937-49960956 | None:intergenic | 35.0% | |
| GATAAATCATGGCATGTTCT+GGG | + | chr7.3:49960973-49960992 | MS.gene051724:CDS | 35.0% | |
| GGTATCAATAGGAAACAAAC+AGG | - | chr7.3:49960381-49960400 | None:intergenic | 35.0% | |
| GTAAAATTTCTGCAGGTTAG+CGG | - | chr7.3:49959834-49959853 | None:intergenic | 35.0% | |
| GTTTCAAATCACGATCGATA+TGG | - | chr7.3:49960668-49960687 | None:intergenic | 35.0% | |
| TAATATGTGATTAGACCAGG+TGG | - | chr7.3:49960934-49960953 | None:intergenic | 35.0% | |
| TACAACATTGTCAGAGAACA+AGG | - | chr7.3:49959600-49959619 | None:intergenic | 35.0% | |
| TACATAGTGTAGTCAAGTAG+TGG | + | chr7.3:49960516-49960535 | MS.gene051724:intron | 35.0% | |
| TAGCAACGATATAACACTGT+AGG | + | chr7.3:49960542-49960561 | MS.gene051724:intron | 35.0% | |
| TCAACATACTTTGACCAAAG+TGG | - | chr7.3:49961108-49961127 | None:intergenic | 35.0% | |
| TCAACTTCTGAATCTTCAGT+TGG | - | chr7.3:49959367-49959386 | None:intergenic | 35.0% | |
| TCAATGGTAACATGAAACCA+TGG | + | chr7.3:49961055-49961074 | MS.gene051724:CDS | 35.0% | |
| TCTTACTGTCTAGGTTCAAA+TGG | + | chr7.3:49958687-49958706 | MS.gene051724:intron | 35.0% | |
| TGAAGAATGCAGAAAAGTTG+TGG | - | chr7.3:49960294-49960313 | None:intergenic | 35.0% | |
| TGATGACATAGTAGTTCAGA+AGG | + | chr7.3:49959994-49960013 | MS.gene051724:CDS | 35.0% | |
| TGCAACTTAGGATACATTTC+TGG | - | chr7.3:49959956-49959975 | None:intergenic | 35.0% | |
| TGGGTTATGGAAGATTGATA+TGG | + | chr7.3:49960024-49960043 | MS.gene051724:CDS | 35.0% | |
| TGTAAATGAGCAGTTAACGA+AGG | + | chr7.3:49959403-49959422 | MS.gene051724:CDS | 35.0% | |
| TTGGTTATCAAAGGACTCTT+TGG | - | chr7.3:49959348-49959367 | None:intergenic | 35.0% | |
| ! | CTTTTGTACTAGGATTCTGA+TGG | + | chr7.3:49958984-49959003 | MS.gene051724:intron | 35.0% |
| ! | TACCTTGATTTGATGTAGCT+AGG | + | chr7.3:49958813-49958832 | MS.gene051724:intron | 35.0% |
| ! | TTGATGCGTGTCAATTTTCT+CGG | + | chr7.3:49958745-49958764 | MS.gene051724:intron | 35.0% |
| !! | CATATTTGTTGTGTCCTTTG+TGG | - | chr7.3:49959879-49959898 | None:intergenic | 35.0% |
| !! | TTCTGGGTTGGTTTAATTTG+AGG | + | chr7.3:49958633-49958652 | MS.gene051724:intron | 35.0% |
| !! | TTGATGATGATGATGATGAG+AGG | - | chr7.3:49958500-49958519 | None:intergenic | 35.0% |
| !!! | AAAGCTTGTTAGGATTTTCG+CGG | + | chr7.3:49959169-49959188 | MS.gene051724:CDS | 35.0% |
| !!! | AGTTTTGGATCTTACTGTCT+AGG | + | chr7.3:49958678-49958697 | MS.gene051724:intron | 35.0% |
| !!! | CGCAACTGTTTTTAAAACCT+TGG | - | chr7.3:49960402-49960421 | None:intergenic | 35.0% |
| !!! | GATTTTTTTCCCGGGAAATA+GGG | + | chr7.3:49958560-49958579 | MS.gene051724:intron | 35.0% |
| !!! | TGACTTTTTTGTTTCTGGGT+TGG | + | chr7.3:49958621-49958640 | MS.gene051724:intron | 35.0% |
| !!! | TGATTTTTTTCCCGGGAAAT+AGG | + | chr7.3:49958559-49958578 | MS.gene051724:intron | 35.0% |
| AAATCACAACCCTATTTCCC+GGG | - | chr7.3:49958572-49958591 | None:intergenic | 40.0% | |
| AAATTAGGAACCTTACCACC+TGG | + | chr7.3:49960916-49960935 | MS.gene051724:CDS | 40.0% | |
| ACACGCATCAAACCCTAAAA+TGG | - | chr7.3:49958736-49958755 | None:intergenic | 40.0% | |
| ACATGCCATGATTTATCCAG+TGG | - | chr7.3:49960970-49960989 | None:intergenic | 40.0% | |
| AGAGTGAAGAAGAAGGTGAA+GGG | - | chr7.3:49958421-49958440 | None:intergenic | 40.0% | |
| AGCTGAGGATCATAAGTCTT+TGG | + | chr7.3:49959100-49959119 | MS.gene051724:CDS | 40.0% | |
| CAATCTTCCATAACCCAGTA+AGG | - | chr7.3:49960021-49960040 | None:intergenic | 40.0% | |
| CCTGAATTCTTCTTATGTGC+CGG | + | chr7.3:49959790-49959809 | MS.gene051724:CDS | 40.0% | |
| CTGAAAAGATTCCTGTATCG+AGG | - | chr7.3:49959230-49959249 | None:intergenic | 40.0% | |
| GAAATCACAACCCTATTTCC+CGG | - | chr7.3:49958573-49958592 | None:intergenic | 40.0% | |
| GAAGATTGATATGGATGGCA+AGG | + | chr7.3:49960033-49960052 | MS.gene051724:CDS | 40.0% | |
| GATAGACAATGCAAGCTCTT+TGG | - | chr7.3:49959476-49959495 | None:intergenic | 40.0% | |
| GCTTGCATTGTCTATCAATG+AGG | + | chr7.3:49959480-49959499 | MS.gene051724:CDS | 40.0% | |
| GGATAAATCATGGCATGTTC+TGG | + | chr7.3:49960972-49960991 | MS.gene051724:CDS | 40.0% | |
| GTAACCGACAAGATGAATCT+GGG | + | chr7.3:49959689-49959708 | MS.gene051724:CDS | 40.0% | |
| GTATCATTACTGGCAGAATC+TGG | + | chr7.3:49960225-49960244 | MS.gene051724:CDS | 40.0% | |
| GTCATTGCAATATCAAGCCA+TGG | - | chr7.3:49961075-49961094 | None:intergenic | 40.0% | |
| GTGTTGTCAATCATTCATCG+CGG | - | chr7.3:49960597-49960616 | None:intergenic | 40.0% | |
| TAATCCAAAGGCTTGTGCAT+GGG | + | chr7.3:49960144-49960163 | MS.gene051724:CDS | 40.0% | |
| TAGTTCAGAAGGACCTTACT+GGG | + | chr7.3:49960005-49960024 | MS.gene051724:CDS | 40.0% | |
| TCAAATCACGATCGATATGG+TGG | - | chr7.3:49960665-49960684 | None:intergenic | 40.0% | |
| TGAGATTAACAATGCAGCTG+TGG | + | chr7.3:49961026-49961045 | MS.gene051724:CDS | 40.0% | |
| TGTAACCGACAAGATGAATC+TGG | + | chr7.3:49959688-49959707 | MS.gene051724:CDS | 40.0% | |
| TTAATCCAAAGGCTTGTGCA+TGG | + | chr7.3:49960143-49960162 | MS.gene051724:CDS | 40.0% | |
| TTACAATGGAGCTCACATTG+AGG | + | chr7.3:49959742-49959761 | MS.gene051724:CDS | 40.0% | |
| TTATAACCCAAGCATCAGCA+TGG | + | chr7.3:49961002-49961021 | MS.gene051724:CDS | 40.0% | |
| TTGTCTATCAATGAGGCTGA+TGG | + | chr7.3:49959487-49959506 | MS.gene051724:CDS | 40.0% | |
| ! | ATCTGTCTTGGCACTGAAAA+CGG | + | chr7.3:49959040-49959059 | MS.gene051724:CDS | 40.0% |
| ! | CGTCGAATTAGAGTTTGTTC+AGG | + | chr7.3:49961128-49961147 | MS.gene051724:CDS | 40.0% |
| ! | GGAACTATCACGGAACTTTT+CGG | + | chr7.3:49959190-49959209 | MS.gene051724:CDS | 40.0% |
| ! | GGAGCTGTAGAAACATGTTT+TGG | + | chr7.3:49960061-49960080 | MS.gene051724:CDS | 40.0% |
| ! | TATGATCCTCAGCTTGCTTA+CGG | - | chr7.3:49959094-49959113 | None:intergenic | 40.0% |
| ! | TCGATCGTGATTTGAAACCT+TGG | + | chr7.3:49960670-49960689 | MS.gene051724:intron | 40.0% |
| ! | TGATTTGGATGCTTGGAGAA+GGG | + | chr7.3:49960186-49960205 | MS.gene051724:CDS | 40.0% |
| ! | TGCAGTTCCTGTTGATGAAT+CGG | + | chr7.3:49959256-49959275 | MS.gene051724:CDS | 40.0% |
| ! | TTGAGAGCTCAAAGCTTGTT+AGG | + | chr7.3:49959159-49959178 | MS.gene051724:CDS | 40.0% |
| ! | TTTGTTCAGGCCTGCAATTT+TGG | + | chr7.3:49961141-49961160 | MS.gene051724:CDS | 40.0% |
| !! | GCAAGTGATGTTCAAGTTGA+AGG | + | chr7.3:49959718-49959737 | MS.gene051724:CDS | 40.0% |
| !! | GCACAGAAGAGTATCATTAC+TGG | + | chr7.3:49960215-49960234 | MS.gene051724:CDS | 40.0% |
| !! | TTGATTTGGATGCTTGGAGA+AGG | + | chr7.3:49960185-49960204 | MS.gene051724:CDS | 40.0% |
| AAAACTACACGCCAGGTGAT+TGG | + | chr7.3:49959317-49959336 | MS.gene051724:CDS | 45.0% | |
| ACACTGATGCGACTACTATG+TGG | + | chr7.3:49960613-49960632 | MS.gene051724:intron | 45.0% | |
| ACATGAAACACGTGCTTCCA+CGG | - | chr7.3:49959668-49959687 | None:intergenic | 45.0% | |
| AGAAGGACCTTACTGGGTTA+TGG | + | chr7.3:49960011-49960030 | MS.gene051724:CDS | 45.0% | |
| AGCGATGAGAGTGAAGAAGA+AGG | - | chr7.3:49958428-49958447 | None:intergenic | 45.0% | |
| AGCTCCCAGATTCATCTTGT+CGG | - | chr7.3:49959696-49959715 | None:intergenic | 45.0% | |
| ATCCTAAAGCGAGGAAAACG+AGG | - | chr7.3:49958394-49958413 | None:intergenic | 45.0% | |
| ATCTCATCCATGCTGATGCT+TGG | - | chr7.3:49961012-49961031 | None:intergenic | 45.0% | |
| CAATGAGGCTGATGGAAGAA+CGG | + | chr7.3:49959495-49959514 | MS.gene051724:CDS | 45.0% | |
| CCAATTGGAGAAGGAAGTGA+AGG | + | chr7.3:49959286-49959305 | MS.gene051724:CDS | 45.0% | |
| CCCTCATCGATATACTTCTC+CGG | - | chr7.3:49959530-49959549 | None:intergenic | 45.0% | |
| CCGGCACATAAGAAGAATTC+AGG | - | chr7.3:49959793-49959812 | None:intergenic | 45.0% | |
| CCTTCACTTCCTTCTCCAAT+TGG | - | chr7.3:49959289-49959308 | None:intergenic | 45.0% | |
| CGAAGCCACTGGATAAATCA+TGG | + | chr7.3:49960962-49960981 | MS.gene051724:CDS | 45.0% | |
| CTCAGCAACAAAGAACGCAA+AGG | + | chr7.3:49959640-49959659 | MS.gene051724:CDS | 45.0% | |
| CTGTCTAGGTTCAAATGGGT+CGG | + | chr7.3:49958692-49958711 | MS.gene051724:intron | 45.0% | |
| GAATTTCAAGATGCAGCCTC+TGG | - | chr7.3:49960748-49960767 | None:intergenic | 45.0% | |
| GAGAGTGAAGAAGAAGGTGA+AGG | - | chr7.3:49958422-49958441 | None:intergenic | 45.0% | |
| GATATGGATGGCAAGGTGAA+TGG | + | chr7.3:49960040-49960059 | MS.gene051724:CDS | 45.0% | |
| GTAGTTCAGAAGGACCTTAC+TGG | + | chr7.3:49960004-49960023 | MS.gene051724:CDS | 45.0% | |
| TCTCATCCATGCTGATGCTT+GGG | - | chr7.3:49961011-49961030 | None:intergenic | 45.0% | |
| TCTTCAACTTCCGGAGGAAT+AGG | - | chr7.3:49959557-49959576 | None:intergenic | 45.0% | |
| TGAAGAAGAAGGTGAAGGGT+CGG | - | chr7.3:49958417-49958436 | None:intergenic | 45.0% | |
| TGACTCAGTTCAAGCCACTT+TGG | + | chr7.3:49961091-49961110 | MS.gene051724:CDS | 45.0% | |
| TGAGTTAACCACAACAGAGG+CGG | - | chr7.3:49959624-49959643 | None:intergenic | 45.0% | |
| TGATGAGCAAACCTCGATAC+AGG | + | chr7.3:49959216-49959235 | MS.gene051724:CDS | 45.0% | |
| TGCTGAGTTAACCACAACAG+AGG | - | chr7.3:49959627-49959646 | None:intergenic | 45.0% | |
| TGGAGCTCACATTGAGGTTA+AGG | + | chr7.3:49959748-49959767 | MS.gene051724:CDS | 45.0% | |
| TGTGATTAGACCAGGTGGTA+AGG | - | chr7.3:49960929-49960948 | None:intergenic | 45.0% | |
| TTAACGAAGGCGAAGAAGCA+GGG | + | chr7.3:49959416-49959435 | MS.gene051724:CDS | 45.0% | |
| TTACTCAACAACGAAGCCAC+TGG | + | chr7.3:49960951-49960970 | MS.gene051724:CDS | 45.0% | |
| TTAGGATCTTCAACTTCCGG+AGG | - | chr7.3:49959563-49959582 | None:intergenic | 45.0% | |
| ! | AGTTCCTGTTGATGAATCGG+TGG | + | chr7.3:49959259-49959278 | MS.gene051724:CDS | 45.0% |
| ! | ATCCTCGTTTTCCTCGCTTT+AGG | + | chr7.3:49958389-49958408 | MS.gene051724:CDS | 45.0% |
| ! | CCGGAGAAGTATATCGATGA+GGG | + | chr7.3:49959527-49959546 | MS.gene051724:CDS | 45.0% |
| ! | CGATCGATATGGTGGAAAGT+CGG | - | chr7.3:49960657-49960676 | None:intergenic | 45.0% |
| ! | CGGAGAAGTATATCGATGAG+GGG | + | chr7.3:49959528-49959547 | MS.gene051724:CDS | 45.0% |
| ! | GGATTTTCGCGGAACTATCA+CGG | + | chr7.3:49959180-49959199 | MS.gene051724:CDS | 45.0% |
| ! | TCCGGAGAAGTATATCGATG+AGG | + | chr7.3:49959526-49959545 | MS.gene051724:CDS | 45.0% |
| ! | TCTGATGGTGATGTTGCTCA+TGG | + | chr7.3:49958999-49959018 | MS.gene051724:CDS | 45.0% |
| ! | TGAGGAAAAATTTGGTGGGC+TGG | + | chr7.3:49958651-49958670 | MS.gene051724:intron | 45.0% |
| !! | ATCACTAGCATTGGTTCCAG+AGG | + | chr7.3:49960729-49960748 | MS.gene051724:intron | 45.0% |
| AAGGCTTGTGCATGGGCTTA+TGG | + | chr7.3:49960151-49960170 | MS.gene051724:CDS | 50.0% | |
| CAAAGAACGCAAAGGAACCG+TGG | + | chr7.3:49959648-49959667 | MS.gene051724:CDS | 50.0% | |
| CAAGCTCGAGAATGCCACAA+AGG | + | chr7.3:49959862-49959881 | MS.gene051724:CDS | 50.0% | |
| CGCGATAAGGAGATCTGTCT+TGG | + | chr7.3:49959028-49959047 | MS.gene051724:CDS | 50.0% | |
| CTCATGGATTCGACGCGATA+AGG | + | chr7.3:49959015-49959034 | MS.gene051724:CDS | 50.0% | |
| GATTCCAGTTGTCGAAGGAC+CGG | - | chr7.3:49959812-49959831 | None:intergenic | 50.0% | |
| GCAGCTGTGGTGCATTTCAA+TGG | + | chr7.3:49961039-49961058 | MS.gene051724:CDS | 50.0% | |
| GTTAACGAAGGCGAAGAAGC+AGG | + | chr7.3:49959415-49959434 | MS.gene051724:CDS | 50.0% | |
| TAAGCCCATGCACAAGCCTT+TGG | - | chr7.3:49960151-49960170 | None:intergenic | 50.0% | |
| TCAGATCCGTAAGCAAGCTG+AGG | + | chr7.3:49959085-49959104 | MS.gene051724:CDS | 50.0% | |
| TGAATCGGTGGTTCGCCAAT+TGG | + | chr7.3:49959271-49959290 | MS.gene051724:CDS | 50.0% | |
| TGGAGAAGGAAGTGAAGGAG+CGG | + | chr7.3:49959291-49959310 | MS.gene051724:CDS | 50.0% | |
| TTACGGATCTGATCCAACCG+AGG | - | chr7.3:49959077-49959096 | None:intergenic | 50.0% | |
| ! | CTTTGGCTTCACCAATCACC+TGG | - | chr7.3:49959331-49959350 | None:intergenic | 50.0% |
| ! | GCGGATTAAAACTACACGCC+AGG | + | chr7.3:49959310-49959329 | MS.gene051724:CDS | 50.0% |
| !! | CGAACCACCGATTCATCAAC+AGG | - | chr7.3:49959266-49959285 | None:intergenic | 50.0% |
| !! | GGAAGAACGGATTGCTCATC+CGG | + | chr7.3:49959508-49959527 | MS.gene051724:CDS | 50.0% |
| !! | TAGCGGATTCCAGTTGTCGA+AGG | - | chr7.3:49959817-49959836 | None:intergenic | 50.0% |
| !! | TCATGGCATGTTCTGGGACT+TGG | + | chr7.3:49960979-49960998 | MS.gene051724:CDS | 50.0% |
| !!! | TGGTGGGCTGGTGTTAGTTT+TGG | + | chr7.3:49958663-49958682 | MS.gene051724:intron | 50.0% |
| AAACGGATCCGCTCAAGCCT+CGG | + | chr7.3:49959057-49959076 | MS.gene051724:CDS | 55.0% | |
| AAGGGTCGGATCCTAAAGCG+AGG | - | chr7.3:49958403-49958422 | None:intergenic | 55.0% | |
| GGTGGTTCGCCAATTGGAGA+AGG | + | chr7.3:49959277-49959296 | MS.gene051724:CDS | 55.0% | |
| TGAGGGGAAGCCTATTCCTC+CGG | + | chr7.3:49959544-49959563 | MS.gene051724:CDS | 55.0% | |
| TGATCCAACCGAGGCTTGAG+CGG | - | chr7.3:49959068-49959087 | None:intergenic | 55.0% | |
| TGTTGTAGCCGCCTCTGTTG+TGG | + | chr7.3:49959613-49959632 | MS.gene051724:CDS | 55.0% | |
| ! | TGTGCCGGTCCTTCGACAAC+TGG | + | chr7.3:49959805-49959824 | MS.gene051724:CDS | 60.0% |
| GGATCCGCTCAAGCCTCGGT+TGG | + | chr7.3:49959061-49959080 | MS.gene051724:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 49958382 | 49961170 | 49958382 | ID=MS.gene051724 |
| chr7.3 | mRNA | 49958382 | 49961170 | 49958382 | ID=MS.gene051724.t1;Parent=MS.gene051724 |
| chr7.3 | exon | 49958382 | 49958531 | 49958382 | ID=MS.gene051724.t1.exon1;Parent=MS.gene051724.t1 |
| chr7.3 | CDS | 49958382 | 49958531 | 49958382 | ID=cds.MS.gene051724.t1;Parent=MS.gene051724.t1 |
| chr7.3 | exon | 49958996 | 49960246 | 49958996 | ID=MS.gene051724.t1.exon2;Parent=MS.gene051724.t1 |
| chr7.3 | CDS | 49958996 | 49960246 | 49958996 | ID=cds.MS.gene051724.t1;Parent=MS.gene051724.t1 |
| chr7.3 | exon | 49960895 | 49961170 | 49960895 | ID=MS.gene051724.t1.exon3;Parent=MS.gene051724.t1 |
| chr7.3 | CDS | 49960895 | 49961170 | 49960895 | ID=cds.MS.gene051724.t1;Parent=MS.gene051724.t1 |
| Gene Sequence |
| Protein sequence |
