Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003298.t1 | XP_003594522.1 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 4.20E-90 | 340.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003298.t1 | Q84JP1 | 52.5 | 177 | 67 | 5 | 1 | 175 | 1 | 162 | 1.5e-35 | 151.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003298.t1 | G7IKU2 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 3.0e-90 | 340.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene003298.t1 | TF | NF-YA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03072 | MS.gene003298 | PPI |
| MS.gene003298 | MS.gene02097 | PPI |
| MS.gene003298 | MS.gene74545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003298.t1 | MTR_2g030170 | 98.551 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 3.25e-153 | 423 |
| MS.gene003298.t1 | MTR_2g030170 | 85.000 | 240 | 3 | 1 | 1 | 207 | 1 | 240 | 1.38e-146 | 407 |
| MS.gene003298.t1 | MTR_3g061510 | 51.429 | 140 | 52 | 4 | 48 | 184 | 116 | 242 | 1.12e-36 | 130 |
| MS.gene003298.t1 | MTR_3g061510 | 51.429 | 140 | 52 | 4 | 48 | 184 | 136 | 262 | 1.61e-36 | 130 |
| MS.gene003298.t1 | MTR_8g037270 | 62.162 | 111 | 38 | 1 | 86 | 192 | 127 | 237 | 3.24e-36 | 128 |
| MS.gene003298.t1 | MTR_8g019540 | 52.381 | 126 | 49 | 3 | 49 | 173 | 110 | 225 | 2.67e-35 | 127 |
| MS.gene003298.t1 | MTR_2g099490 | 43.210 | 162 | 82 | 4 | 47 | 199 | 118 | 278 | 2.77e-35 | 127 |
| MS.gene003298.t1 | MTR_2g099490 | 43.312 | 157 | 73 | 4 | 47 | 199 | 118 | 262 | 8.87e-34 | 123 |
| MS.gene003298.t1 | MTR_2g041090 | 44.444 | 144 | 71 | 3 | 62 | 204 | 32 | 167 | 5.73e-32 | 116 |
| MS.gene003298.t1 | MTR_7g106450 | 42.138 | 159 | 69 | 5 | 49 | 204 | 122 | 260 | 9.85e-30 | 112 |
| MS.gene003298.t1 | MTR_1g056530 | 43.537 | 147 | 59 | 6 | 44 | 186 | 111 | 237 | 2.99e-29 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003298.t1 | AT1G30500 | 54.146 | 205 | 73 | 7 | 1 | 203 | 1 | 186 | 3.79e-65 | 199 |
| MS.gene003298.t1 | AT1G30500 | 53.171 | 205 | 71 | 7 | 1 | 203 | 1 | 182 | 6.08e-63 | 194 |
| MS.gene003298.t1 | AT2G34720 | 50.000 | 212 | 83 | 8 | 1 | 206 | 1 | 195 | 3.67e-58 | 182 |
| MS.gene003298.t1 | AT2G34720 | 59.060 | 149 | 51 | 4 | 62 | 206 | 18 | 160 | 7.14e-54 | 170 |
| MS.gene003298.t1 | AT2G34720 | 59.060 | 149 | 51 | 4 | 62 | 206 | 18 | 160 | 7.14e-54 | 170 |
| MS.gene003298.t1 | AT3G20910 | 45.625 | 160 | 73 | 3 | 48 | 204 | 112 | 260 | 2.06e-37 | 132 |
| MS.gene003298.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene003298.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene003298.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene003298.t1 | AT5G12840 | 45.509 | 167 | 73 | 4 | 47 | 207 | 117 | 271 | 7.73e-37 | 129 |
| MS.gene003298.t1 | AT5G12840 | 45.509 | 167 | 73 | 4 | 47 | 207 | 117 | 271 | 7.73e-37 | 129 |
| MS.gene003298.t1 | AT1G72830 | 47.552 | 143 | 56 | 4 | 61 | 192 | 134 | 268 | 3.42e-34 | 124 |
| MS.gene003298.t1 | AT1G54160 | 57.843 | 102 | 40 | 2 | 86 | 184 | 148 | 249 | 7.94e-33 | 120 |
| MS.gene003298.t1 | AT1G72830 | 47.222 | 144 | 56 | 5 | 61 | 192 | 134 | 269 | 2.10e-32 | 119 |
| MS.gene003298.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene003298.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene003298.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene003298.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene003298.t1 | AT3G14020 | 54.808 | 104 | 42 | 2 | 73 | 175 | 134 | 233 | 3.33e-29 | 110 |
| MS.gene003298.t1 | AT3G14020 | 54.808 | 104 | 42 | 2 | 73 | 175 | 134 | 233 | 3.33e-29 | 110 |
| MS.gene003298.t1 | AT5G06510 | 40.559 | 143 | 61 | 5 | 76 | 203 | 2 | 135 | 9.54e-25 | 95.9 |
| MS.gene003298.t1 | AT5G06510 | 40.559 | 143 | 61 | 5 | 76 | 203 | 2 | 135 | 9.54e-25 | 95.9 |
| MS.gene003298.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene003298.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene003298.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene003298.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene003298.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 75 | 181 | 2.65e-24 | 95.9 |
| MS.gene003298.t1 | AT3G05690 | 42.609 | 115 | 42 | 2 | 62 | 172 | 105 | 199 | 3.47e-23 | 94.7 |
| MS.gene003298.t1 | AT3G05690 | 42.609 | 115 | 42 | 2 | 62 | 172 | 142 | 236 | 7.90e-23 | 94.4 |
| MS.gene003298.t1 | AT1G72830 | 54.878 | 82 | 27 | 1 | 121 | 192 | 162 | 243 | 3.00e-22 | 92.4 |
Find 57 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAATTGAGATTGATAT+TGG | 0.249770 | 2.4:-59467991 | None:intergenic |
| CCAGGCCAATCTTCAGTTAA+TGG | 0.300525 | 2.4:+59467068 | MS.gene003298:intron |
| CGGATAAGGTTGTGCATCAT+AGG | 0.307636 | 2.4:-59466923 | None:intergenic |
| TGGATGTCCACCGTAGGGTT+GGG | 0.327514 | 2.4:-59466947 | None:intergenic |
| CTGTAGTAGGGATCCGGATA+TGG | 0.349828 | 2.4:-59466886 | None:intergenic |
| CCGTAGGGTTGGGGCGGATA+AGG | 0.389203 | 2.4:-59466937 | None:intergenic |
| GAAATTCCGTTTGCAGATAT+AGG | 0.399724 | 2.4:-59464388 | None:intergenic |
| AATTCCCATTAACTGAAGAT+TGG | 0.417171 | 2.4:-59467073 | None:intergenic |
| CTTTCTTTGAATTCAGAAAC+CGG | 0.421740 | 2.4:-59467923 | None:intergenic |
| AGCAAAGATGCTTCTGTAGT+AGG | 0.425029 | 2.4:-59466899 | None:intergenic |
| CAGGCCAATCTTCAGTTAAT+GGG | 0.435926 | 2.4:+59467069 | MS.gene003298:intron |
| TGTCGTGATTCATGCAAGTA+TGG | 0.440305 | 2.4:-59467864 | None:intergenic |
| AAAAGAAAGTTACACGGAAT+CGG | 0.459956 | 2.4:+59467211 | MS.gene003298:CDS |
| GCACCTCCACAGCTTGGCAC+GGG | 0.466695 | 2.4:+59464451 | MS.gene003298:CDS |
| GGATGTCCACCGTAGGGTTG+GGG | 0.475330 | 2.4:-59466946 | None:intergenic |
| ACCACCTGCTTATCCATATC+CGG | 0.479165 | 2.4:+59466873 | MS.gene003298:CDS |
| CTGAAAAGAGCAAGAGGATG+TGG | 0.485801 | 2.4:+59467897 | MS.gene003298:CDS |
| CGCCGGTATTGATAATGCTC+AGG | 0.487682 | 2.4:+59464414 | MS.gene003298:CDS |
| TTGGATGTCCACCGTAGGGT+TGG | 0.494814 | 2.4:-59466948 | None:intergenic |
| GCAAAGATGCTTCTGTAGTA+GGG | 0.499527 | 2.4:-59466898 | None:intergenic |
| GTCAATGCAAAACAGTATCA+TGG | 0.506073 | 2.4:+59467147 | MS.gene003298:CDS |
| ATGCTTCTGTAGTAGGGATC+CGG | 0.507422 | 2.4:-59466892 | None:intergenic |
| GCTTGGCACGGGGCATGCTA+TGG | 0.522353 | 2.4:+59464462 | MS.gene003298:CDS |
| AGCACCTCCACAGCTTGGCA+CGG | 0.523882 | 2.4:+59464450 | MS.gene003298:CDS |
| TTTGCCAACTGATGCAGTTG+AGG | 0.525775 | 2.4:+59467113 | MS.gene003298:CDS |
| GGATAAGGTTGTGCATCATA+GGG | 0.532027 | 2.4:-59466922 | None:intergenic |
| GCATGCCCCGTGCCAAGCTG+TGG | 0.532400 | 2.4:-59464457 | None:intergenic |
| GAGCAAGAGGATGTGGAGGC+CGG | 0.538187 | 2.4:+59467904 | MS.gene003298:CDS |
| GAGAATCAACAAGATGAGGT+TGG | 0.539095 | 2.4:+59467948 | MS.gene003298:CDS |
| TGCCCCGTGCCAAGCTGTGG+AGG | 0.541599 | 2.4:-59464454 | None:intergenic |
| GGATCCGGATATGGATAAGC+AGG | 0.543946 | 2.4:-59466877 | None:intergenic |
| GGCTCCTCAACTGCATCAGT+TGG | 0.545637 | 2.4:-59467117 | None:intergenic |
| AACCTGAGCATTATCAATAC+CGG | 0.557780 | 2.4:-59464416 | None:intergenic |
| ACCCTACGGTGGACATCCAA+TGG | 0.560327 | 2.4:+59466951 | MS.gene003298:CDS |
| ATGCAGCCTATATCTGCAAA+CGG | 0.566429 | 2.4:+59464382 | MS.gene003298:CDS |
| CCTTATCCGCCCCAACCCTA+CGG | 0.570229 | 2.4:+59466937 | MS.gene003298:CDS |
| CACCTCCACAGCTTGGCACG+GGG | 0.573071 | 2.4:+59464452 | MS.gene003298:CDS |
| TGTCCACCGTAGGGTTGGGG+CGG | 0.580026 | 2.4:-59466943 | None:intergenic |
| TGTCCAGATAACGAGGCTGA+TGG | 0.582397 | 2.4:+59464337 | MS.gene003298:intron |
| ACCATTGGATGTCCACCGTA+GGG | 0.583635 | 2.4:-59466952 | None:intergenic |
| CACGCTCTGAAAAGAGCAAG+AGG | 0.590582 | 2.4:+59467891 | MS.gene003298:CDS |
| TATGCAGCACCTCCACAGCT+TGG | 0.593812 | 2.4:+59464445 | MS.gene003298:CDS |
| AGATGAGAATCAACAAGATG+AGG | 0.599218 | 2.4:+59467944 | MS.gene003298:CDS |
| TCAACTGCATCAGTTGGCAA+AGG | 0.603408 | 2.4:-59467111 | None:intergenic |
| GGATATGGATAAGCAGGTGG+TGG | 0.616937 | 2.4:-59466871 | None:intergenic |
| TATCCGCCCCAACCCTACGG+TGG | 0.619833 | 2.4:+59466940 | MS.gene003298:CDS |
| GAAAGTTACACGGAATCGGA+AGG | 0.621098 | 2.4:+59467215 | MS.gene003298:CDS |
| TTAATGGGAATTCAGCATGC+AGG | 0.625390 | 2.4:+59467084 | MS.gene003298:CDS |
| ATCATGTGTGGAAGAAGTCA+TGG | 0.636060 | 2.4:-59463286 | None:intergenic |
| TCTTCCACACATGATCCCAC+AGG | 0.647344 | 2.4:+59463294 | MS.gene003298:CDS |
| AACCATTGGATGTCCACCGT+AGG | 0.650023 | 2.4:-59466953 | None:intergenic |
| AAAAGAGCAAGAGGATGTGG+AGG | 0.656650 | 2.4:+59467900 | MS.gene003298:CDS |
| AATACCTGTGGGATCATGTG+TGG | 0.669627 | 2.4:-59463298 | None:intergenic |
| TCCGGATATGGATAAGCAGG+TGG | 0.669883 | 2.4:-59466874 | None:intergenic |
| AAATTGTTGTCCAGATAACG+AGG | 0.691918 | 2.4:+59464330 | MS.gene003298:intron |
| AATCAGAAAAGAAAGTTACA+CGG | 0.697568 | 2.4:+59467205 | MS.gene003298:CDS |
| GCAAACGGAATTTCTCACGC+CGG | 0.724226 | 2.4:+59464397 | MS.gene003298:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTAATAACATAATAA+TGG | - | chr2.4:59464179-59464198 | None:intergenic | 10.0% |
| !! | TTAATAAAAAATGTATAATG+GGG | + | chr2.4:59467306-59467325 | MS.gene003298:intron | 10.0% |
| !!! | AACATTTAAAATTTGAAAAT+TGG | - | chr2.4:59467592-59467611 | None:intergenic | 10.0% |
| !!! | ACATTTAAAATTTGAAAATT+GGG | - | chr2.4:59467591-59467610 | None:intergenic | 10.0% |
| !!! | TAAATGTATTAAATTTGTTA+AGG | - | chr2.4:59465319-59465338 | None:intergenic | 10.0% |
| !!! | TTTTTTAATCTTAAAATTGA+AGG | + | chr2.4:59466609-59466628 | MS.gene003298:intron | 10.0% |
| !! | AAATAAATAAATCTCAATCA+AGG | - | chr2.4:59467285-59467304 | None:intergenic | 15.0% |
| !! | AAATTAATAATGTCAGAAAT+TGG | + | chr2.4:59466331-59466350 | MS.gene003298:intron | 15.0% |
| !! | CTAACTCATTTAAAAATTAA+AGG | - | chr2.4:59464764-59464783 | None:intergenic | 15.0% |
| !! | TATCAGTACTTAAATATATT+AGG | - | chr2.4:59463467-59463486 | None:intergenic | 15.0% |
| !! | TTAAATATAAGAAAATCTCA+CGG | - | chr2.4:59463796-59463815 | None:intergenic | 15.0% |
| !! | TTGATAAAACAAAATCATTT+AGG | + | chr2.4:59463364-59463383 | MS.gene003298:intron | 15.0% |
| !!! | CAAAGTTTACATTTTAAAAT+AGG | - | chr2.4:59466804-59466823 | None:intergenic | 15.0% |
| !!! | TAGATTACACATTTTTAAAT+AGG | + | chr2.4:59463729-59463748 | MS.gene003298:intron | 15.0% |
| !!! | TATTTTAACTTTTTGGTTTT+GGG | + | chr2.4:59464936-59464955 | MS.gene003298:intron | 15.0% |
| !!! | TTATTTTAACTTTTTGGTTT+TGG | + | chr2.4:59464935-59464954 | MS.gene003298:intron | 15.0% |
| !!! | TTTCTGACATTATTAATTTT+TGG | - | chr2.4:59466330-59466349 | None:intergenic | 15.0% |
| !! | AAAGAACTCAAAAATGTATT+AGG | - | chr2.4:59465031-59465050 | None:intergenic | 20.0% |
| !! | AATTACTTCACAAATTCTTT+AGG | + | chr2.4:59464596-59464615 | MS.gene003298:intron | 20.0% |
| !! | ATGCAAACTGAAAATAAAAA+AGG | - | chr2.4:59465798-59465817 | None:intergenic | 20.0% |
| !! | CATTCAATTAATGATGTATA+TGG | + | chr2.4:59463893-59463912 | MS.gene003298:intron | 20.0% |
| !! | TGATAGAATTATTGTAAACA+GGG | + | chr2.4:59463482-59463501 | MS.gene003298:intron | 20.0% |
| !! | TGTAAATTAACATTACTTAG+AGG | + | chr2.4:59466543-59466562 | MS.gene003298:intron | 20.0% |
| !!! | AAACTTTGTTTATGCTTTAA+CGG | + | chr2.4:59466816-59466835 | MS.gene003298:intron | 20.0% |
| !!! | AATGAATTTCATTTTCTGAA+AGG | - | chr2.4:59465829-59465848 | None:intergenic | 20.0% |
| !!! | TAGACAATTTTAGTTTTTGA+AGG | + | chr2.4:59465056-59465075 | MS.gene003298:intron | 20.0% |
| !!! | TGCTTTTTGCATTTTATTAA+AGG | + | chr2.4:59466846-59466865 | MS.gene003298:intron | 20.0% |
| !!! | TTATCATTTTTCAATTGCTA+GGG | - | chr2.4:59465853-59465872 | None:intergenic | 20.0% |
| !!! | TTGTTTCTTATAAAAAGAAC+CGG | - | chr2.4:59466412-59466393 | None:intergenic | 20.0% |
| ! | AAAGTTAATATGATAGAGGA+TGG | + | chr2.4:59463668-59463687 | MS.gene003298:intron | 25.0% |
| ! | AAATAGGATTTCATTGAGTT+AGG | + | chr2.4:59463745-59463764 | MS.gene003298:intron | 25.0% |
| ! | AACGAAAGTTAATATGATAG+AGG | + | chr2.4:59463664-59463683 | MS.gene003298:intron | 25.0% |
| ! | AAGTTAATATGATAGAGGAT+GGG | + | chr2.4:59463669-59463688 | MS.gene003298:intron | 25.0% |
| ! | AATCAGAAAAGAAAGTTACA+CGG | + | chr2.4:59467205-59467224 | MS.gene003298:CDS | 25.0% |
| ! | AGAATTACTTCTTCAAATCA+TGG | + | chr2.4:59463412-59463431 | MS.gene003298:intron | 25.0% |
| ! | AGATCAAATCATCAAAATCA+AGG | + | chr2.4:59465382-59465401 | MS.gene003298:intron | 25.0% |
| ! | AGCCTACTTAAGTTATATTA+TGG | + | chr2.4:59467739-59467758 | MS.gene003298:intron | 25.0% |
| ! | ATCAGAATTGAGATTGATAT+TGG | - | chr2.4:59467994-59468013 | None:intergenic | 25.0% |
| ! | ATCTTTAAACAACATTCTCT+AGG | + | chr2.4:59464144-59464163 | MS.gene003298:intron | 25.0% |
| ! | ATGTGAGTCAAATAAATTGA+CGG | - | chr2.4:59467793-59467812 | None:intergenic | 25.0% |
| ! | ATTTGAAGAAGTAATTCTTC+TGG | - | chr2.4:59463410-59463429 | None:intergenic | 25.0% |
| ! | CATAAAAAACAACAGAAATG+TGG | - | chr2.4:59466775-59466794 | None:intergenic | 25.0% |
| ! | CATTACATAAAGATAACAAC+TGG | - | chr2.4:59466674-59466693 | None:intergenic | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr2.4:59463932-59463951 | None:intergenic | 25.0% |
| ! | CTGATAGAATTATTGTAAAC+AGG | + | chr2.4:59463481-59463500 | MS.gene003298:intron | 25.0% |
| ! | GCCTACTTAAGTTATATTAT+GGG | + | chr2.4:59467740-59467759 | MS.gene003298:intron | 25.0% |
| ! | GTAAACTCCTAATACATTTA+GGG | + | chr2.4:59463532-59463551 | MS.gene003298:intron | 25.0% |
| ! | GTTATGTCATTGAAGAAAAT+TGG | + | chr2.4:59464698-59464717 | MS.gene003298:intron | 25.0% |
| ! | TATTTACAGGAAAATCTCTT+AGG | + | chr2.4:59463317-59463336 | MS.gene003298:intron | 25.0% |
| ! | TCATTTATTTATTTGTCGTC+TGG | + | chr2.4:59467631-59467650 | MS.gene003298:intron | 25.0% |
| ! | TGTAAACTCCTAATACATTT+AGG | + | chr2.4:59463531-59463550 | MS.gene003298:intron | 25.0% |
| ! | TTGTTATGAAATCAAAATGG+AGG | + | chr2.4:59465466-59465485 | MS.gene003298:intron | 25.0% |
| !! | ATTACATTTTGCACGTTTTT+GGG | - | chr2.4:59464282-59464301 | None:intergenic | 25.0% |
| !! | TATTACATTTTGCACGTTTT+TGG | - | chr2.4:59464283-59464302 | None:intergenic | 25.0% |
| !! | TATTTTCAGTTTGCATTTGT+CGG | + | chr2.4:59465802-59465821 | MS.gene003298:intron | 25.0% |
| !! | TTTGTTTGATAACTAACTTC+AGG | - | chr2.4:59464313-59464332 | None:intergenic | 25.0% |
| !! | TTTTTAAATGAGTTAGCTGT+TGG | + | chr2.4:59464768-59464787 | MS.gene003298:intron | 25.0% |
| !!! | AACTTAAGTAGGCTTTAAAT+CGG | - | chr2.4:59467733-59467752 | None:intergenic | 25.0% |
| !!! | CAAATTCTTTAGGATGTTTT+TGG | + | chr2.4:59464606-59464625 | MS.gene003298:intron | 25.0% |
| !!! | CTTATCATTTTTCAATTGCT+AGG | - | chr2.4:59465854-59465873 | None:intergenic | 25.0% |
| !!! | GCTGTTGATTTTTTGTAATA+CGG | + | chr2.4:59466990-59467009 | MS.gene003298:intron | 25.0% |
| !!! | TATTAGGAGAAGTTTTTTGA+AGG | - | chr2.4:59465015-59465034 | None:intergenic | 25.0% |
| AAAAGAAAGTTACACGGAAT+CGG | + | chr2.4:59467211-59467230 | MS.gene003298:CDS | 30.0% | |
| AAAATTTGAAAATTGGGCTG+TGG | - | chr2.4:59467585-59467604 | None:intergenic | 30.0% | |
| AAGAAATTAGAACGAACCAT+TGG | - | chr2.4:59466970-59466989 | None:intergenic | 30.0% | |
| AAGGAAAAAAACTCACATGT+TGG | + | chr2.4:59465075-59465094 | MS.gene003298:intron | 30.0% | |
| AATGCTTGTCATCCTTTATA+TGG | - | chr2.4:59467451-59467470 | None:intergenic | 30.0% | |
| AATGTCATAGAACTAAGAAG+TGG | + | chr2.4:59466690-59466709 | MS.gene003298:intron | 30.0% | |
| AATTCCCATTAACTGAAGAT+TGG | - | chr2.4:59467076-59467095 | None:intergenic | 30.0% | |
| ACATAAAACTTCAGATAGCA+TGG | - | chr2.4:59464218-59464237 | None:intergenic | 30.0% | |
| AGCCTAAAAGTTAACTATTG+AGG | + | chr2.4:59465176-59465195 | MS.gene003298:intron | 30.0% | |
| AGGAAAAAAACTCACATGTT+GGG | + | chr2.4:59465076-59465095 | MS.gene003298:intron | 30.0% | |
| ATTCTGAATTTCTCAGAAGA+TGG | + | chr2.4:59466210-59466229 | MS.gene003298:intron | 30.0% | |
| ATTGTCTTCATAAGCTATCT+TGG | - | chr2.4:59464024-59464043 | None:intergenic | 30.0% | |
| ATTTGAGAGCTTATGAAAAC+CGG | + | chr2.4:59463600-59463619 | MS.gene003298:intron | 30.0% | |
| CCTAAAAGTTAACTATTGAG+GGG | + | chr2.4:59465178-59465197 | MS.gene003298:intron | 30.0% | |
| CTAAAAGTTAACTATTGAGG+GGG | + | chr2.4:59465179-59465198 | MS.gene003298:intron | 30.0% | |
| CTACTATTGTTTAAGAAGAG+GGG | + | chr2.4:59463701-59463720 | MS.gene003298:intron | 30.0% | |
| CTTTCTTTGAATTCAGAAAC+CGG | - | chr2.4:59467926-59467945 | None:intergenic | 30.0% | |
| GCCCATAATATAACTTAAGT+AGG | - | chr2.4:59467744-59467763 | None:intergenic | 30.0% | |
| GCCTAAAAGTTAACTATTGA+GGG | + | chr2.4:59465177-59465196 | MS.gene003298:intron | 30.0% | |
| GCGTTGTTATGAAATCAAAA+TGG | + | chr2.4:59465463-59465482 | MS.gene003298:intron | 30.0% | |
| GCTACTATTGTTTAAGAAGA+GGG | + | chr2.4:59463700-59463719 | MS.gene003298:intron | 30.0% | |
| GCTTCCTAATACCATAAAAA+AGG | + | chr2.4:59465676-59465695 | MS.gene003298:intron | 30.0% | |
| TACTATTGTTTAAGAAGAGG+GGG | + | chr2.4:59463702-59463721 | MS.gene003298:intron | 30.0% | |
| TATGCAATTACACGTGTTAT+TGG | + | chr2.4:59465441-59465460 | MS.gene003298:intron | 30.0% | |
| TCTTAATCAATTACTACCTC+CGG | + | chr2.4:59465339-59465358 | MS.gene003298:intron | 30.0% | |
| TGATAACAATCTAAGAACCT+GGG | + | chr2.4:59464808-59464827 | MS.gene003298:intron | 30.0% | |
| TGCTACTATTGTTTAAGAAG+AGG | + | chr2.4:59463699-59463718 | MS.gene003298:intron | 30.0% | |
| TGTGAGTCAAATAAATTGAC+GGG | - | chr2.4:59467792-59467811 | None:intergenic | 30.0% | |
| TTTCTTATAAAAAGAACCGG+AGG | - | chr2.4:59465358-59465377 | None:intergenic | 30.0% | |
| ! | ATTTTCAGTTTGCATTTGTC+GGG | + | chr2.4:59465803-59465822 | MS.gene003298:intron | 30.0% |
| ! | ATTTTCCTGTAAATACCTGT+GGG | - | chr2.4:59463312-59463331 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATAATTGTGAC+CGG | - | chr2.4:59463858-59463877 | None:intergenic | 30.0% |
| ! | TAAACTGTCTAGTCTAAAAC+CGG | - | chr2.4:59463622-59463641 | None:intergenic | 30.0% |
| ! | TGTTTTTCTTTTCAGCACTT+AGG | + | chr2.4:59466456-59466475 | MS.gene003298:intron | 30.0% |
| ! | TTAACTTTTAGGCTTTGCTT+GGG | - | chr2.4:59465170-59465189 | None:intergenic | 30.0% |
| ! | TTACATTTTGCACGTTTTTG+GGG | - | chr2.4:59464281-59464300 | None:intergenic | 30.0% |
| !! | ATTAAATTTGTTAAGGCGCA+TGG | - | chr2.4:59465312-59465331 | None:intergenic | 30.0% |
| !! | TTAAATTTGTTAAGGCGCAT+GGG | - | chr2.4:59465311-59465330 | None:intergenic | 30.0% |
| !!! | AAGTTTTTTGAAGGTTTTGG+AGG | - | chr2.4:59465006-59465025 | None:intergenic | 30.0% |
| !!! | AGGATTTTTTCAAGTGGTTT+TGG | + | chr2.4:59466429-59466448 | MS.gene003298:intron | 30.0% |
| !!! | AGTTTTTTGAAGGTTTTGGA+GGG | - | chr2.4:59465005-59465024 | None:intergenic | 30.0% |
| !!! | CTCTCCTTTTTTATGGTATT+AGG | - | chr2.4:59465683-59465702 | None:intergenic | 30.0% |
| !!! | GAGAAGTTTTTTGAAGGTTT+TGG | - | chr2.4:59465009-59465028 | None:intergenic | 30.0% |
| !!! | GGCATTTTTATTTTCTGATG+TGG | + | chr2.4:59463338-59463357 | MS.gene003298:intron | 30.0% |
| !!! | GTTGATTTTTTGTAATACGG+TGG | + | chr2.4:59466993-59467012 | MS.gene003298:intron | 30.0% |
| !!! | TAAATCGGTGTTTTGAAAAC+CGG | - | chr2.4:59467718-59467737 | None:intergenic | 30.0% |
| !!! | TACTCTTCTCTCCTTTTTTA+TGG | - | chr2.4:59465690-59465709 | None:intergenic | 30.0% |
| !!! | TGTGCTTTTTCTCCATATAA+AGG | + | chr2.4:59467436-59467455 | MS.gene003298:intron | 30.0% |
| AAACAGGCCCTAAATGTATT+AGG | - | chr2.4:59463542-59463561 | None:intergenic | 35.0% | |
| AAAGAAGCCACAAGAGAAAA+GGG | - | chr2.4:59467253-59467272 | None:intergenic | 35.0% | |
| AAATTGTTGTCCAGATAACG+AGG | + | chr2.4:59464330-59464349 | MS.gene003298:intron | 35.0% | |
| AACATGTTCATGTTGGATCA+TGG | + | chr2.4:59465987-59466006 | MS.gene003298:intron | 35.0% | |
| AACCTGAGCATTATCAATAC+CGG | - | chr2.4:59464419-59464438 | None:intergenic | 35.0% | |
| AATAAGCAGAGAACAGCTAA+TGG | - | chr2.4:59463989-59464008 | None:intergenic | 35.0% | |
| AATCCTAGCATCAAGTAACA+TGG | - | chr2.4:59466415-59466434 | None:intergenic | 35.0% | |
| ACAACAAATTTCCAGGAACT+AGG | - | chr2.4:59466747-59466766 | None:intergenic | 35.0% | |
| AGATGAGAATCAACAAGATG+AGG | + | chr2.4:59467944-59467963 | MS.gene003298:CDS | 35.0% | |
| AGTAGAGACTTGGGTATTAT+GGG | - | chr2.4:59465269-59465288 | None:intergenic | 35.0% | |
| CAACAAATTTCCAGGAACTA+GGG | - | chr2.4:59466746-59466765 | None:intergenic | 35.0% | |
| CTTCTTCAAATCATGGTTGT+CGG | + | chr2.4:59463419-59463438 | MS.gene003298:intron | 35.0% | |
| GAAAAAAACTCACATGTTGG+GGG | + | chr2.4:59465078-59465097 | MS.gene003298:intron | 35.0% | |
| GAAAAATGATAAGCCGTTTG+AGG | + | chr2.4:59465861-59465880 | MS.gene003298:intron | 35.0% | |
| GAAATTCCGTTTGCAGATAT+AGG | - | chr2.4:59464391-59464410 | None:intergenic | 35.0% | |
| GATAACAATCTAAGAACCTG+GGG | + | chr2.4:59464809-59464828 | MS.gene003298:intron | 35.0% | |
| GATTAAATTACCCTAGTTCC+TGG | + | chr2.4:59466733-59466752 | MS.gene003298:intron | 35.0% | |
| GGAAAAAAACTCACATGTTG+GGG | + | chr2.4:59465077-59465096 | MS.gene003298:intron | 35.0% | |
| GGAAGAACCAAACAACTTAA+TGG | + | chr2.4:59465200-59465219 | MS.gene003298:intron | 35.0% | |
| GGCAAAAACAACAAATTTCC+AGG | - | chr2.4:59466754-59466773 | None:intergenic | 35.0% | |
| GTACATTCATAGATGATGCA+TGG | - | chr2.4:59467820-59467839 | None:intergenic | 35.0% | |
| GTATAGAACCATTCCTCAAA+CGG | - | chr2.4:59465877-59465896 | None:intergenic | 35.0% | |
| GTCAATGCAAAACAGTATCA+TGG | + | chr2.4:59467147-59467166 | MS.gene003298:CDS | 35.0% | |
| GTGAGTCAAATAAATTGACG+GGG | - | chr2.4:59467791-59467810 | None:intergenic | 35.0% | |
| GTGATAACAATCTAAGAACC+TGG | + | chr2.4:59464807-59464826 | MS.gene003298:intron | 35.0% | |
| TAGTAGAGACTTGGGTATTA+TGG | - | chr2.4:59465270-59465289 | None:intergenic | 35.0% | |
| TCAAACAAGTCAATCCAAAC+AGG | - | chr2.4:59463558-59463577 | None:intergenic | 35.0% | |
| TCAAAGCAAAAGCAGGAATT+TGG | - | chr2.4:59465632-59465651 | None:intergenic | 35.0% | |
| ! | ATTGCAAACTGTCTGAAGTT+CGG | + | chr2.4:59466519-59466538 | MS.gene003298:intron | 35.0% |
| ! | CCCCTCAATAGTTAACTTTT+AGG | - | chr2.4:59465181-59465200 | None:intergenic | 35.0% |
| ! | GATTTTCCTGTAAATACCTG+TGG | - | chr2.4:59463313-59463332 | None:intergenic | 35.0% |
| ! | GTTAACTTTTAGGCTTTGCT+TGG | - | chr2.4:59465171-59465190 | None:intergenic | 35.0% |
| ! | TAATACATTTAGGGCCTGTT+TGG | + | chr2.4:59463541-59463560 | MS.gene003298:intron | 35.0% |
| !! | TATAATGGGGAGAAGTTTTC+TGG | + | chr2.4:59467319-59467338 | MS.gene003298:intron | 35.0% |
| !! | TGTTTTGCATTGACAAACAC+AGG | - | chr2.4:59467141-59467160 | None:intergenic | 35.0% |
| !!! | ATCATGGTATTTTAAGACGC+AGG | + | chr2.4:59467163-59467182 | MS.gene003298:CDS | 35.0% |
| !!! | GATGCTAGGATTTTTTCAAG+TGG | + | chr2.4:59466423-59466442 | MS.gene003298:intron | 35.0% |
| AAAGAACTTGGAGAATGGAG+AGG | + | chr2.4:59464878-59464897 | MS.gene003298:intron | 40.0% | |
| AAAGATCTGTGACCTTGATG+TGG | + | chr2.4:59467358-59467377 | MS.gene003298:intron | 40.0% | |
| AACCAGACTACGATATAACC+GGG | - | chr2.4:59467549-59467568 | None:intergenic | 40.0% | |
| AAGAAGCCACAAGAGAAAAG+GGG | - | chr2.4:59467252-59467271 | None:intergenic | 40.0% | |
| AAGATCTGTGACCTTGATGT+GGG | + | chr2.4:59467359-59467378 | MS.gene003298:intron | 40.0% | |
| AAGGGAAAGAACTTGGAGAA+TGG | + | chr2.4:59464873-59464892 | MS.gene003298:intron | 40.0% | |
| AATGAAGAAGGGAAGGAAAG+TGG | - | chr2.4:59465116-59465135 | None:intergenic | 40.0% | |
| ACTCCCAAACAAACCCTTAA+TGG | - | chr2.4:59464841-59464860 | None:intergenic | 40.0% | |
| ACTTCGGGAGAAATGAAGAA+GGG | - | chr2.4:59465127-59465146 | None:intergenic | 40.0% | |
| AGATATCAAGACCCACATCA+AGG | - | chr2.4:59467373-59467392 | None:intergenic | 40.0% | |
| AGCAAAGATGCTTCTGTAGT+AGG | - | chr2.4:59466902-59466921 | None:intergenic | 40.0% | |
| AGTCAAATGCAGTCACATTG+CGG | - | chr2.4:59467417-59467436 | None:intergenic | 40.0% | |
| ATATCGTAGTCTGGTTGAAC+TGG | + | chr2.4:59467553-59467572 | MS.gene003298:intron | 40.0% | |
| ATGATAAGCCGTTTGAGGAA+TGG | + | chr2.4:59465866-59465885 | MS.gene003298:intron | 40.0% | |
| ATGATCCCACAGGTATTTAC+AGG | + | chr2.4:59463304-59463323 | MS.gene003298:intron | 40.0% | |
| ATGCAGCCTATATCTGCAAA+CGG | + | chr2.4:59464382-59464401 | MS.gene003298:CDS | 40.0% | |
| ATTGAACCATATTCTGTGCC+AGG | + | chr2.4:59467050-59467069 | MS.gene003298:intron | 40.0% | |
| CAACCAGACTACGATATAAC+CGG | - | chr2.4:59467550-59467569 | None:intergenic | 40.0% | |
| CACAAGAGAAAAGGGGATAA+TGG | - | chr2.4:59467245-59467264 | None:intergenic | 40.0% | |
| CAGGCCAATCTTCAGTTAAT+GGG | + | chr2.4:59467069-59467088 | MS.gene003298:intron | 40.0% | |
| CATTACTTAGAGGTAGCGAT+TGG | + | chr2.4:59466553-59466572 | MS.gene003298:intron | 40.0% | |
| CCAATTAAACCATGACCTGA+AGG | + | chr2.4:59467670-59467689 | MS.gene003298:intron | 40.0% | |
| CCTTCAGGTCATGGTTTAAT+TGG | - | chr2.4:59467673-59467692 | None:intergenic | 40.0% | |
| CTTCACAGTAGTAGAGACTT+GGG | - | chr2.4:59465278-59465297 | None:intergenic | 40.0% | |
| GAAAGAAGCCACAAGAGAAA+AGG | - | chr2.4:59467254-59467273 | None:intergenic | 40.0% | |
| GAATTTCTCAGAAGATGGCT+TGG | + | chr2.4:59466215-59466234 | MS.gene003298:intron | 40.0% | |
| GACGTTGAAGGCAATCATAA+GGG | + | chr2.4:59465650-59465669 | MS.gene003298:intron | 40.0% | |
| GAGAATCAACAAGATGAGGT+TGG | + | chr2.4:59467948-59467967 | MS.gene003298:CDS | 40.0% | |
| GCAAAGATGCTTCTGTAGTA+GGG | - | chr2.4:59466901-59466920 | None:intergenic | 40.0% | |
| GGATAAGGTTGTGCATCATA+GGG | - | chr2.4:59466925-59466944 | None:intergenic | 40.0% | |
| GTAAGGCAACATGTTCATGT+TGG | + | chr2.4:59465980-59465999 | MS.gene003298:intron | 40.0% | |
| GTTTAAAAACCAGACCAAGC+CGG | + | chr2.4:59467495-59467514 | MS.gene003298:intron | 40.0% | |
| TATCGTAGTCTGGTTGAACT+GGG | + | chr2.4:59467554-59467573 | MS.gene003298:intron | 40.0% | |
| TCTCTTGTGGCTTCTTTCTA+TGG | + | chr2.4:59467256-59467275 | MS.gene003298:intron | 40.0% | |
| TGACGTTGAAGGCAATCATA+AGG | + | chr2.4:59465649-59465668 | MS.gene003298:intron | 40.0% | |
| TGATGTGGGTCTTGATATCT+AGG | + | chr2.4:59467373-59467392 | MS.gene003298:intron | 40.0% | |
| TGCTTATAATTGTGACCGGA+GGG | - | chr2.4:59463854-59463873 | None:intergenic | 40.0% | |
| TGTCGTGATTCATGCAAGTA+TGG | - | chr2.4:59467867-59467886 | None:intergenic | 40.0% | |
| TTAATGGGAATTCAGCATGC+AGG | + | chr2.4:59467084-59467103 | MS.gene003298:CDS | 40.0% | |
| TTCAACGTCAAAGCAAAAGC+AGG | - | chr2.4:59465639-59465658 | None:intergenic | 40.0% | |
| TTCAGTCCTCGATAGCAAAA+TGG | - | chr2.4:59466055-59466074 | None:intergenic | 40.0% | |
| TTCATTGAGTTAGGTAGCCA+TGG | + | chr2.4:59463754-59463773 | MS.gene003298:intron | 40.0% | |
| TTGCTTATAATTGTGACCGG+AGG | - | chr2.4:59463855-59463874 | None:intergenic | 40.0% | |
| TTTAAAAACCAGACCAAGCC+GGG | + | chr2.4:59467496-59467515 | MS.gene003298:intron | 40.0% | |
| ! | AATCAAGGAAGTGCACTTGA+AGG | + | chr2.4:59465397-59465416 | MS.gene003298:intron | 40.0% |
| ! | CATTATCCCCTTTTCTCTTG+TGG | + | chr2.4:59467243-59467262 | MS.gene003298:intron | 40.0% |
| ! | CCTCCATTAAGGGTTTGTTT+GGG | + | chr2.4:59464835-59464854 | MS.gene003298:intron | 40.0% |
| ! | GAACCATGTTACTTGATGCT+AGG | + | chr2.4:59466409-59466428 | MS.gene003298:intron | 40.0% |
| ! | GGTGAAGCCATTAAGTTGTT+TGG | - | chr2.4:59465210-59465229 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGGAGTTAGAA+GGG | + | chr2.4:59464846-59464865 | MS.gene003298:intron | 40.0% |
| ! | GTAATGAGCGTGTCATGTTT+TGG | + | chr2.4:59466243-59466262 | MS.gene003298:intron | 40.0% |
| ! | TCCTCCATTAAGGGTTTGTT+TGG | + | chr2.4:59464834-59464853 | MS.gene003298:intron | 40.0% |
| ! | TGCTTTTGCTTTGACGTTGA+AGG | + | chr2.4:59465638-59465657 | MS.gene003298:intron | 40.0% |
| !! | ATAGGACTAGTCAAAGGCAT+CGG | - | chr2.4:59464251-59464270 | None:intergenic | 40.0% |
| !! | CTTCACTTGTTTGCTATCCA+TGG | + | chr2.4:59464542-59464561 | MS.gene003298:intron | 40.0% |
| AAAAGAGCAAGAGGATGTGG+AGG | + | chr2.4:59467900-59467919 | MS.gene003298:CDS | 45.0% | |
| AAAAGCAGGAATTTGGCTGC+AGG | - | chr2.4:59465625-59465644 | None:intergenic | 45.0% | |
| AACAAACTGGTGAGACCTTC+AGG | - | chr2.4:59467688-59467707 | None:intergenic | 45.0% | |
| AAGAAGGGAAGGAAAGTGGA+AGG | - | chr2.4:59465112-59465131 | None:intergenic | 45.0% | |
| AAGTGCACCACATTGTGACA+TGG | + | chr2.4:59466073-59466092 | MS.gene003298:intron | 45.0% | |
| AATACCTGTGGGATCATGTG+TGG | - | chr2.4:59463301-59463320 | None:intergenic | 45.0% | |
| ACCACCTGCTTATCCATATC+CGG | + | chr2.4:59466873-59466892 | MS.gene003298:CDS | 45.0% | |
| AGAAGGGAAGGAAAGTGGAA+GGG | - | chr2.4:59465111-59465130 | None:intergenic | 45.0% | |
| AGATTGGAGGGAACCAAGAT+GGG | - | chr2.4:59465733-59465752 | None:intergenic | 45.0% | |
| AGCTTTCACAGTGTTGCAGT+TGG | - | chr2.4:59465597-59465616 | None:intergenic | 45.0% | |
| AGTCTCTACTACTGTGAAGG+TGG | + | chr2.4:59465279-59465298 | MS.gene003298:intron | 45.0% | |
| ATCCCGGTTATATCGTAGTC+TGG | + | chr2.4:59467544-59467563 | MS.gene003298:intron | 45.0% | |
| ATGAGGGAAAGGGAAGACTT+CGG | - | chr2.4:59465143-59465162 | None:intergenic | 45.0% | |
| ATGCTTCTGTAGTAGGGATC+CGG | - | chr2.4:59466895-59466914 | None:intergenic | 45.0% | |
| ATGTTGGATCATGGTCGTTC+TGG | + | chr2.4:59465996-59466015 | MS.gene003298:intron | 45.0% | |
| ATTGTGACATGGTCCTGTGT+CGG | + | chr2.4:59466084-59466103 | MS.gene003298:intron | 45.0% | |
| CACTTCCAATAAGAGAGCCA+TGG | - | chr2.4:59464562-59464581 | None:intergenic | 45.0% | |
| CATCTCATGCTTCTCGATGT+GGG | + | chr2.4:59465233-59465252 | MS.gene003298:intron | 45.0% | |
| CATGGCTCTCTTATTGGAAG+TGG | + | chr2.4:59464560-59464579 | MS.gene003298:intron | 45.0% | |
| CCAAGTCTCTACTACTGTGA+AGG | + | chr2.4:59465276-59465295 | MS.gene003298:intron | 45.0% | |
| CCAGGCCAATCTTCAGTTAA+TGG | + | chr2.4:59467068-59467087 | MS.gene003298:intron | 45.0% | |
| CCCAAACAAACCCTTAATGG+AGG | - | chr2.4:59464838-59464857 | None:intergenic | 45.0% | |
| CCTTCACAGTAGTAGAGACT+TGG | - | chr2.4:59465279-59465298 | None:intergenic | 45.0% | |
| CGGATAAGGTTGTGCATCAT+AGG | - | chr2.4:59466926-59466945 | None:intergenic | 45.0% | |
| CTGAAAAGAGCAAGAGGATG+TGG | + | chr2.4:59467897-59467916 | MS.gene003298:CDS | 45.0% | |
| CTGTGATAGCTACAACGAGA+CGG | - | chr2.4:59464658-59464677 | None:intergenic | 45.0% | |
| CTTGGGAGTAATGAGGGAAA+GGG | - | chr2.4:59465153-59465172 | None:intergenic | 45.0% | |
| GAAAGTTACACGGAATCGGA+AGG | + | chr2.4:59467215-59467234 | MS.gene003298:CDS | 45.0% | |
| GACTTCGGGAGAAATGAAGA+AGG | - | chr2.4:59465128-59465147 | None:intergenic | 45.0% | |
| GCAAACATGTTGTGAAGCTG+CGG | - | chr2.4:59465756-59465775 | None:intergenic | 45.0% | |
| GCTATCACAGATGCACATTG+TGG | + | chr2.4:59464668-59464687 | MS.gene003298:intron | 45.0% | |
| GCTATCCATGGCTCTCTTAT+TGG | + | chr2.4:59464554-59464573 | MS.gene003298:intron | 45.0% | |
| GCTTTCACAGTGTTGCAGTT+GGG | - | chr2.4:59465596-59465615 | None:intergenic | 45.0% | |
| GCTTTGCTTGGGAGTAATGA+GGG | - | chr2.4:59465159-59465178 | None:intergenic | 45.0% | |
| GGGAGAAAAGGGAAAGAACT+TGG | + | chr2.4:59464866-59464885 | MS.gene003298:intron | 45.0% | |
| GGGAGTTAGAAGGGAGAAAA+GGG | + | chr2.4:59464855-59464874 | MS.gene003298:intron | 45.0% | |
| GTCTCTACTACTGTGAAGGT+GGG | + | chr2.4:59465280-59465299 | MS.gene003298:intron | 45.0% | |
| GTGCTAGTGTAGTACTACCA+TGG | - | chr2.4:59463774-59463793 | None:intergenic | 45.0% | |
| GTTCTGCATTGCCAAACAGT+AGG | + | chr2.4:59465909-59465928 | MS.gene003298:intron | 45.0% | |
| TCAACTGCATCAGTTGGCAA+AGG | - | chr2.4:59467114-59467133 | None:intergenic | 45.0% | |
| TCTCAATGCAAAACGACAGC+AGG | - | chr2.4:59466027-59466046 | None:intergenic | 45.0% | |
| TGGGAGTTAGAAGGGAGAAA+AGG | + | chr2.4:59464854-59464873 | MS.gene003298:intron | 45.0% | |
| TGTTGCAGTTGGGAGATCAA+TGG | - | chr2.4:59465586-59465605 | None:intergenic | 45.0% | |
| TTTGCCAACTGATGCAGTTG+AGG | + | chr2.4:59467113-59467132 | MS.gene003298:CDS | 45.0% | |
| ! | AATGGGGAGAAGTTTTCTGG+AGG | + | chr2.4:59467322-59467341 | MS.gene003298:intron | 45.0% |
| ! | ATCGAGAAGCATGAGATGCT+CGG | - | chr2.4:59465231-59465250 | None:intergenic | 45.0% |
| ! | CCATTAACTGAAGATTGGCC+TGG | - | chr2.4:59467071-59467090 | None:intergenic | 45.0% |
| ! | CTTTGACTAGTCCTATTCCC+TGG | + | chr2.4:59464255-59464274 | MS.gene003298:intron | 45.0% |
| ! | GGGTTTGTTTGGGAGTTAGA+AGG | + | chr2.4:59464845-59464864 | MS.gene003298:intron | 45.0% |
| !! | AACACGCCATTTTGCTATCG+AGG | + | chr2.4:59466046-59466065 | MS.gene003298:intron | 45.0% |
| !! | CAGGGAATAGGACTAGTCAA+AGG | - | chr2.4:59464257-59464276 | None:intergenic | 45.0% |
| !! | GTAGTCTTGTGGTGACTCTA+TGG | + | chr2.4:59466121-59466140 | MS.gene003298:intron | 45.0% |
| !! | TTTAATAAAAAATGTATAAT+GGG | + | chr2.4:59467305-59467324 | MS.gene003298:intron | 5.0% |
| !!! | TTATTTTTATTTTAACTTTT+TGG | + | chr2.4:59464929-59464948 | MS.gene003298:intron | 5.0% |
| !!! | TTTTAATAAAAAATGTATAA+TGG | + | chr2.4:59467304-59467323 | MS.gene003298:intron | 5.0% |
| AACCATTGGATGTCCACCGT+AGG | - | chr2.4:59466956-59466975 | None:intergenic | 50.0% | |
| AACCGGACCAGAGAACAAAC+TGG | - | chr2.4:59467701-59467720 | None:intergenic | 50.0% | |
| AAGAAGTGGCTGCTCAGACT+TGG | + | chr2.4:59466704-59466723 | MS.gene003298:intron | 50.0% | |
| ACCATTGGATGTCCACCGTA+GGG | - | chr2.4:59466955-59466974 | None:intergenic | 50.0% | |
| ACCTGGGGAATCCTCCATTA+AGG | + | chr2.4:59464824-59464843 | MS.gene003298:intron | 50.0% | |
| CAAGATGGGAGGATGAGGAA+AGG | - | chr2.4:59465719-59465738 | None:intergenic | 50.0% | |
| CACAGGACCATGTCACAATG+TGG | - | chr2.4:59466083-59466102 | None:intergenic | 50.0% | |
| CCTGGGGAATCCTCCATTAA+GGG | + | chr2.4:59464825-59464844 | MS.gene003298:intron | 50.0% | |
| CGGGAGAAATGAAGAAGGGA+AGG | - | chr2.4:59465123-59465142 | None:intergenic | 50.0% | |
| CTGTAGTAGGGATCCGGATA+TGG | - | chr2.4:59466889-59466908 | None:intergenic | 50.0% | |
| CTTGGAGAATGGAGAGGAGA+CGG | + | chr2.4:59464884-59464903 | MS.gene003298:intron | 50.0% | |
| CTTTCCTCATCCTCCCATCT+TGG | + | chr2.4:59465717-59465736 | MS.gene003298:intron | 50.0% | |
| GAGATACAACGTACACCCTC+CGG | + | chr2.4:59463836-59463855 | MS.gene003298:intron | 50.0% | |
| GAGATCAATGGATGGTGAGG+GGG | - | chr2.4:59465574-59465593 | None:intergenic | 50.0% | |
| GAGATTGGAGGGAACCAAGA+TGG | - | chr2.4:59465734-59465753 | None:intergenic | 50.0% | |
| GATAGCTACAACGAGACGGA+GGG | - | chr2.4:59464654-59464673 | None:intergenic | 50.0% | |
| GATGCGGTTGCAAGATGGTA+AGG | + | chr2.4:59465963-59465982 | MS.gene003298:intron | 50.0% | |
| GCAAACGGAATTTCTCACGC+CGG | + | chr2.4:59464397-59464416 | MS.gene003298:CDS | 50.0% | |
| GCAGTTGGGAGATCAATGGA+TGG | - | chr2.4:59465582-59465601 | None:intergenic | 50.0% | |
| GCATCTCATGCTTCTCGATG+TGG | + | chr2.4:59465232-59465251 | MS.gene003298:intron | 50.0% | |
| GCGATTCTCTGCCTACTGTT+TGG | - | chr2.4:59465923-59465942 | None:intergenic | 50.0% | |
| GCTTGGGAGTAATGAGGGAA+AGG | - | chr2.4:59465154-59465173 | None:intergenic | 50.0% | |
| GGAGATCAATGGATGGTGAG+GGG | - | chr2.4:59465575-59465594 | None:intergenic | 50.0% | |
| GGATATGGATAAGCAGGTGG+TGG | - | chr2.4:59466874-59466893 | None:intergenic | 50.0% | |
| GGATCCGGATATGGATAAGC+AGG | - | chr2.4:59466880-59466899 | None:intergenic | 50.0% | |
| GGCTTTGCTTGGGAGTAATG+AGG | - | chr2.4:59465160-59465179 | None:intergenic | 50.0% | |
| GGGAAGACAGCAGTGTTACA+CGG | - | chr2.4:59465532-59465551 | None:intergenic | 50.0% | |
| GGGAGATCAATGGATGGTGA+GGG | - | chr2.4:59465576-59465595 | None:intergenic | 50.0% | |
| TCCGGATATGGATAAGCAGG+TGG | - | chr2.4:59466877-59466896 | None:intergenic | 50.0% | |
| TCTTCCACACATGATCCCAC+AGG | + | chr2.4:59463294-59463313 | MS.gene003298:CDS | 50.0% | |
| TGAGGGAAAGGGAAGACTTC+GGG | - | chr2.4:59465142-59465161 | None:intergenic | 50.0% | |
| TGATAGCTACAACGAGACGG+AGG | - | chr2.4:59464655-59464674 | None:intergenic | 50.0% | |
| TGCTTCTCGATGTGGGACAT+AGG | + | chr2.4:59465240-59465259 | MS.gene003298:intron | 50.0% | |
| TGGGAGATCAATGGATGGTG+AGG | - | chr2.4:59465577-59465596 | None:intergenic | 50.0% | |
| TGTCCAGATAACGAGGCTGA+TGG | + | chr2.4:59464337-59464356 | MS.gene003298:intron | 50.0% | |
| TGTCCATCAGCCTCGTTATC+TGG | - | chr2.4:59464343-59464362 | None:intergenic | 50.0% | |
| TGTTGTGAAGCTGCGGAGAT+TGG | - | chr2.4:59465749-59465768 | None:intergenic | 50.0% | |
| ! | CACCAGTTTGTTCTCTGGTC+CGG | + | chr2.4:59467696-59467715 | MS.gene003298:intron | 50.0% |
| ! | GGTCTCACCAGTTTGTTCTC+TGG | + | chr2.4:59467691-59467710 | MS.gene003298:intron | 50.0% |
| !! | CACGCTCTGAAAAGAGCAAG+AGG | + | chr2.4:59467891-59467910 | MS.gene003298:CDS | 50.0% |
| !! | CGCCGGTATTGATAATGCTC+AGG | + | chr2.4:59464414-59464433 | MS.gene003298:CDS | 50.0% |
| !! | GATTGGCCTGGCACAGAATA+TGG | - | chr2.4:59467059-59467078 | None:intergenic | 50.0% |
| !! | TTTGGTGGTTGGTCTGATCC+CGG | + | chr2.4:59467528-59467547 | MS.gene003298:intron | 50.0% |
| !!! | TTTGCACGTTTTTGGGGCCA+GGG | - | chr2.4:59464275-59464294 | None:intergenic | 50.0% |
| !!! | TTTTGCACGTTTTTGGGGCC+AGG | - | chr2.4:59464276-59464295 | None:intergenic | 50.0% |
| AAACCAGACCAAGCCGGGAT+CGG | + | chr2.4:59467501-59467520 | MS.gene003298:intron | 55.0% | |
| ACCACCAAACTGACCGATCC+CGG | - | chr2.4:59467517-59467536 | None:intergenic | 55.0% | |
| ACCAGGTGAACAGAGCGATG+CGG | + | chr2.4:59465947-59465966 | MS.gene003298:intron | 55.0% | |
| ACCCTACGGTGGACATCCAA+TGG | + | chr2.4:59466951-59466970 | MS.gene003298:CDS | 55.0% | |
| AGAGCGATGCGGTTGCAAGA+TGG | + | chr2.4:59465958-59465977 | MS.gene003298:intron | 55.0% | |
| CCCTTAATGGAGGATTCCCC+AGG | - | chr2.4:59464828-59464847 | None:intergenic | 55.0% | |
| CTGGTGAGACCTTCAGGTCA+TGG | - | chr2.4:59467682-59467701 | None:intergenic | 55.0% | |
| GGAACCAAGATGGGAGGATG+AGG | - | chr2.4:59465724-59465743 | None:intergenic | 55.0% | |
| GGCTCCTCAACTGCATCAGT+TGG | - | chr2.4:59467120-59467139 | None:intergenic | 55.0% | |
| GTGAAGCTGCGGAGATTGGA+GGG | - | chr2.4:59465745-59465764 | None:intergenic | 55.0% | |
| TATGCAGCACCTCCACAGCT+TGG | + | chr2.4:59464445-59464464 | MS.gene003298:CDS | 55.0% | |
| TGGAGAGGAGACGGAAGAGA+AGG | + | chr2.4:59464893-59464912 | MS.gene003298:intron | 55.0% | |
| TGGATGTCCACCGTAGGGTT+GGG | - | chr2.4:59466950-59466969 | None:intergenic | 55.0% | |
| TGTGAAGCTGCGGAGATTGG+AGG | - | chr2.4:59465746-59465765 | None:intergenic | 55.0% | |
| TTGGAGGGAACCAAGATGGG+AGG | - | chr2.4:59465730-59465749 | None:intergenic | 55.0% | |
| TTGGATGTCCACCGTAGGGT+TGG | - | chr2.4:59466951-59466970 | None:intergenic | 55.0% | |
| ! | GGATCGGTCAGTTTGGTGGT+TGG | + | chr2.4:59467517-59467536 | MS.gene003298:intron | 55.0% |
| ! | TGCACGCAACGGTAGTCTTG+TGG | + | chr2.4:59466110-59466129 | MS.gene003298:intron | 55.0% |
| !!! | CGTTTTTGGGGCCAGGGAAT+AGG | - | chr2.4:59464269-59464288 | None:intergenic | 55.0% |
| ACCGCATCGCTCTGTTCACC+TGG | - | chr2.4:59465951-59465970 | None:intergenic | 60.0% | |
| AGCACCTCCACAGCTTGGCA+CGG | + | chr2.4:59464450-59464469 | MS.gene003298:CDS | 60.0% | |
| ATGGTGAGGGGGACAGAGTG+GGG | - | chr2.4:59465563-59465582 | None:intergenic | 60.0% | |
| CAAACTGACCGATCCCGGCT+TGG | - | chr2.4:59467512-59467531 | None:intergenic | 60.0% | |
| CAAGCCGGGATCGGTCAGTT+TGG | + | chr2.4:59467510-59467529 | MS.gene003298:intron | 60.0% | |
| CCTTATCCGCCCCAACCCTA+CGG | + | chr2.4:59466937-59466956 | MS.gene003298:CDS | 60.0% | |
| GACAGAGTGGGGAGGAGGTT+GGG | - | chr2.4:59465552-59465571 | None:intergenic | 60.0% | |
| GAGCAAGAGGATGTGGAGGC+CGG | + | chr2.4:59467904-59467923 | MS.gene003298:CDS | 60.0% | |
| GATGGTGAGGGGGACAGAGT+GGG | - | chr2.4:59465564-59465583 | None:intergenic | 60.0% | |
| GGATGTCCACCGTAGGGTTG+GGG | - | chr2.4:59466949-59466968 | None:intergenic | 60.0% | |
| GGCAGAGAATCGCAACGACC+AGG | + | chr2.4:59465930-59465949 | MS.gene003298:intron | 60.0% | |
| !! | ACGAGACGGAGGGCATCGAA+TGG | - | chr2.4:59464644-59464663 | None:intergenic | 60.0% |
| !! | TGTGTCGGTGCTGCACGCAA+CGG | + | chr2.4:59466099-59466118 | MS.gene003298:intron | 60.0% |
| CACCTCCACAGCTTGGCACG+GGG | + | chr2.4:59464452-59464471 | MS.gene003298:CDS | 65.0% | |
| CCGTAGGGTTGGGGCGGATA+AGG | - | chr2.4:59466940-59466959 | None:intergenic | 65.0% | |
| GCACCTCCACAGCTTGGCAC+GGG | + | chr2.4:59464451-59464470 | MS.gene003298:CDS | 65.0% | |
| GCCGGGATCGGTCAGTTTGG+TGG | + | chr2.4:59467513-59467532 | MS.gene003298:intron | 65.0% | |
| GCTTGGCACGGGGCATGCTA+TGG | + | chr2.4:59464462-59464481 | MS.gene003298:CDS | 65.0% | |
| GGACAGAGTGGGGAGGAGGT+TGG | - | chr2.4:59465553-59465572 | None:intergenic | 65.0% | |
| GGATGGTGAGGGGGACAGAG+TGG | - | chr2.4:59465565-59465584 | None:intergenic | 65.0% | |
| TATCCGCCCCAACCCTACGG+TGG | + | chr2.4:59466940-59466959 | MS.gene003298:CDS | 65.0% | |
| TGTCCACCGTAGGGTTGGGG+CGG | - | chr2.4:59466946-59466965 | None:intergenic | 65.0% | |
| !! | CGGAGGGCATCGAATGGCTG+TGG | - | chr2.4:59464638-59464657 | None:intergenic | 65.0% |
| !! | GTTGCGTGCAGCACCGACAC+AGG | - | chr2.4:59466100-59466119 | None:intergenic | 65.0% |
| !! | TGACCGATCCCGGCTTGGTC+TGG | - | chr2.4:59467507-59467526 | None:intergenic | 65.0% |
| AGGGGGACAGAGTGGGGAGG+AGG | - | chr2.4:59465557-59465576 | None:intergenic | 70.0% | |
| GCATGCCCCGTGCCAAGCTG+TGG | - | chr2.4:59464460-59464479 | None:intergenic | 70.0% | |
| GTGAGGGGGACAGAGTGGGG+AGG | - | chr2.4:59465560-59465579 | None:intergenic | 70.0% | |
| TGCCCCGTGCCAAGCTGTGG+AGG | - | chr2.4:59464457-59464476 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 59463288 | 59468049 | 59463288 | ID=MS.gene003298 |
| chr2.4 | mRNA | 59463288 | 59468049 | 59463288 | ID=MS.gene003298.t1;Parent=MS.gene003298 |
| chr2.4 | exon | 59463288 | 59463315 | 59463288 | ID=MS.gene003298.t1.exon1;Parent=MS.gene003298.t1 |
| chr2.4 | CDS | 59463288 | 59463315 | 59463288 | ID=cds.MS.gene003298.t1;Parent=MS.gene003298.t1 |
| chr2.4 | exon | 59464344 | 59464483 | 59464344 | ID=MS.gene003298.t1.exon2;Parent=MS.gene003298.t1 |
| chr2.4 | CDS | 59464344 | 59464483 | 59464344 | ID=cds.MS.gene003298.t1;Parent=MS.gene003298.t1 |
| chr2.4 | exon | 59466868 | 59466972 | 59466868 | ID=MS.gene003298.t1.exon3;Parent=MS.gene003298.t1 |
| chr2.4 | CDS | 59466868 | 59466972 | 59466868 | ID=cds.MS.gene003298.t1;Parent=MS.gene003298.t1 |
| chr2.4 | exon | 59467072 | 59467236 | 59467072 | ID=MS.gene003298.t1.exon4;Parent=MS.gene003298.t1 |
| chr2.4 | CDS | 59467072 | 59467236 | 59467072 | ID=cds.MS.gene003298.t1;Parent=MS.gene003298.t1 |
| chr2.4 | exon | 59467864 | 59468049 | 59467864 | ID=MS.gene003298.t1.exon5;Parent=MS.gene003298.t1 |
| chr2.4 | CDS | 59467864 | 59468049 | 59467864 | ID=cds.MS.gene003298.t1;Parent=MS.gene003298.t1 |
| Gene Sequence |
| Protein sequence |
