AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03072

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03072.t1 MTR_2g030170 98.068 207 4 0 1 207 1 207 4.37e-153 422
MS.gene03072.t1 MTR_2g030170 84.583 240 4 1 1 207 1 240 1.79e-146 407
MS.gene03072.t1 MTR_3g061510 51.429 140 52 4 48 184 116 242 1.04e-36 130
MS.gene03072.t1 MTR_3g061510 51.429 140 52 4 48 184 136 262 1.63e-36 130
MS.gene03072.t1 MTR_8g037270 62.162 111 38 1 86 192 127 237 2.98e-36 129
MS.gene03072.t1 MTR_8g019540 52.381 126 49 3 49 173 110 225 2.59e-35 127
MS.gene03072.t1 MTR_2g099490 43.210 162 82 4 47 199 118 278 2.62e-35 127
MS.gene03072.t1 MTR_2g099490 43.312 157 73 4 47 199 118 262 8.78e-34 123
MS.gene03072.t1 MTR_2g041090 44.444 144 71 3 62 204 32 167 5.43e-32 116
MS.gene03072.t1 MTR_7g106450 42.138 159 69 5 49 204 122 260 8.88e-30 112
MS.gene03072.t1 MTR_1g056530 43.537 147 59 6 44 186 111 237 2.64e-29 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03072.t1 AT1G30500 53.659 205 74 7 1 203 1 186 6.54e-65 199
MS.gene03072.t1 AT1G30500 52.683 205 72 7 1 203 1 182 1.08e-62 193
MS.gene03072.t1 AT2G34720 49.528 212 84 8 1 206 1 195 6.98e-58 181
MS.gene03072.t1 AT2G34720 59.060 149 51 4 62 206 18 160 7.22e-54 170
MS.gene03072.t1 AT2G34720 59.060 149 51 4 62 206 18 160 7.22e-54 170
MS.gene03072.t1 AT3G20910 45.625 160 73 3 48 204 112 260 1.93e-37 132
MS.gene03072.t1 AT5G12840 46.108 167 72 4 47 207 118 272 6.96e-37 130
MS.gene03072.t1 AT5G12840 46.108 167 72 4 47 207 118 272 6.96e-37 130
MS.gene03072.t1 AT5G12840 46.108 167 72 4 47 207 118 272 6.96e-37 130
MS.gene03072.t1 AT5G12840 45.509 167 73 4 47 207 117 271 7.90e-37 129
MS.gene03072.t1 AT5G12840 45.509 167 73 4 47 207 117 271 7.90e-37 129
MS.gene03072.t1 AT1G72830 47.552 143 56 4 61 192 134 268 3.46e-34 124
MS.gene03072.t1 AT1G54160 57.843 102 40 2 86 184 148 249 7.06e-33 120
MS.gene03072.t1 AT1G72830 47.222 144 56 5 61 192 134 269 2.15e-32 119
MS.gene03072.t1 AT1G17590 50.000 120 46 3 61 179 132 238 8.52e-31 115
MS.gene03072.t1 AT1G17590 50.000 120 46 3 61 179 132 238 8.52e-31 115
MS.gene03072.t1 AT1G17590 50.000 120 46 3 61 179 132 238 8.52e-31 115
MS.gene03072.t1 AT1G17590 50.000 120 46 3 61 179 132 238 8.52e-31 115
MS.gene03072.t1 AT3G14020 54.808 104 42 2 73 175 134 233 2.97e-29 110
MS.gene03072.t1 AT3G14020 54.808 104 42 2 73 175 134 233 2.97e-29 110
MS.gene03072.t1 AT5G06510 40.559 143 61 5 76 203 2 135 9.54e-25 95.9
MS.gene03072.t1 AT5G06510 40.559 143 61 5 76 203 2 135 9.54e-25 95.9
MS.gene03072.t1 AT5G06510 46.364 110 46 3 104 203 124 230 2.51e-24 97.1
MS.gene03072.t1 AT5G06510 46.364 110 46 3 104 203 124 230 2.51e-24 97.1
MS.gene03072.t1 AT5G06510 46.364 110 46 3 104 203 124 230 2.51e-24 97.1
MS.gene03072.t1 AT5G06510 46.364 110 46 3 104 203 124 230 2.51e-24 97.1
MS.gene03072.t1 AT5G06510 46.364 110 46 3 104 203 75 181 2.54e-24 95.9
MS.gene03072.t1 AT3G05690 42.609 115 42 2 62 172 105 199 3.37e-23 94.7
MS.gene03072.t1 AT3G05690 42.609 115 42 2 62 172 142 236 7.90e-23 94.4
MS.gene03072.t1 AT1G72830 54.878 82 27 1 121 192 162 243 2.82e-22 92.4

Find 55 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGAATTGAGATTGATAT+TGG 0.249770 2.1:-61030315 None:intergenic
CCAGGCCAATCTTCAGTTAA+TGG 0.300525 2.1:+61029391 MS.gene03072:intron
CGGATAAGGTTGTGCATCAT+AGG 0.313332 2.1:-61029246 None:intergenic
CTGTAGTAGGGATCCGGATA+TGG 0.349828 2.1:-61029209 None:intergenic
CCGTAGGGTTGCGGCGGATA+AGG 0.368018 2.1:-61029260 None:intergenic
GAAATTCCGTTTGCAGATAT+AGG 0.399724 2.1:-61026706 None:intergenic
AATTCCCATTAACTGAAGAT+TGG 0.417171 2.1:-61029396 None:intergenic
TGCCGTGATTCATGCAAGTA+TGG 0.417627 2.1:-61030188 None:intergenic
AGCAAAGATGCTTCTGTAGT+AGG 0.425029 2.1:-61029222 None:intergenic
CAGGCCAATCTTCAGTTAAT+GGG 0.435926 2.1:+61029392 MS.gene03072:intron
AAAAGAAAGTTACACGGAAT+CGG 0.459956 2.1:+61029534 MS.gene03072:CDS
GCACCTCCACAGCTTGGCAC+GGG 0.466695 2.1:+61026769 MS.gene03072:CDS
ACCACCTGCTTATCCATATC+CGG 0.479165 2.1:+61029196 MS.gene03072:CDS
CTGAAAAGAGCAAGAGGATG+TGG 0.485801 2.1:+61030221 MS.gene03072:CDS
CGCCGGTGTTGATAATGCTC+AGG 0.486893 2.1:+61026732 MS.gene03072:CDS
GCAAAGATGCTTCTGTAGTA+GGG 0.499527 2.1:-61029221 None:intergenic
GTCAATGCAAAACAGTATCA+TGG 0.506073 2.1:+61029470 MS.gene03072:CDS
ATGCTTCTGTAGTAGGGATC+CGG 0.507422 2.1:-61029215 None:intergenic
GGATAAGGTTGTGCATCATA+GGG 0.522061 2.1:-61029245 None:intergenic
GCTTGGCACGGGGCATGCTA+TGG 0.522353 2.1:+61026780 MS.gene03072:CDS
GGATGTCCACCGTAGGGTTG+CGG 0.523458 2.1:-61029269 None:intergenic
AGCACCTCCACAGCTTGGCA+CGG 0.523882 2.1:+61026768 MS.gene03072:CDS
TTTGCCAACTGATGCAGTTG+AGG 0.525775 2.1:+61029436 MS.gene03072:CDS
GCATGCCCCGTGCCAAGCTG+TGG 0.532400 2.1:-61026775 None:intergenic
GAGAATCAACAAGATGAGGT+TGG 0.539095 2.1:+61030272 MS.gene03072:CDS
CCTTATCCGCCGCAACCCTA+CGG 0.540441 2.1:+61029260 MS.gene03072:CDS
TGCCCCGTGCCAAGCTGTGG+AGG 0.541599 2.1:-61026772 None:intergenic
GGATCCGGATATGGATAAGC+AGG 0.543946 2.1:-61029200 None:intergenic
GGCTCCTCAACTGCATCAGT+TGG 0.545637 2.1:-61029440 None:intergenic
ACCCTACGGTGGACATCCAA+TGG 0.560327 2.1:+61029274 MS.gene03072:CDS
ATGCAGCCTATATCTGCAAA+CGG 0.566429 2.1:+61026700 MS.gene03072:CDS
CACCTCCACAGCTTGGCACG+GGG 0.573071 2.1:+61026770 MS.gene03072:CDS
TGTCCAGATAACGAGGCTGA+TGG 0.582397 2.1:+61026655 MS.gene03072:intron
ACCATTGGATGTCCACCGTA+GGG 0.583635 2.1:-61029275 None:intergenic
AGCCATACTTGCATGAATCA+CGG 0.589710 2.1:+61030186 MS.gene03072:intron
CACGCTCTGAAAAGAGCAAG+AGG 0.590582 2.1:+61030215 MS.gene03072:CDS
TATGCAGCACCTCCACAGCT+TGG 0.593812 2.1:+61026763 MS.gene03072:CDS
AGATGAGAATCAACAAGATG+AGG 0.599218 2.1:+61030268 MS.gene03072:CDS
TCAACTGCATCAGTTGGCAA+AGG 0.603408 2.1:-61029434 None:intergenic
GGATATGGATAAGCAGGTGG+TGG 0.616937 2.1:-61029194 None:intergenic
GAAAGTTACACGGAATCGGA+AGG 0.621098 2.1:+61029538 MS.gene03072:CDS
GAGCAAGAGGATGTGGAGGT+CGG 0.623548 2.1:+61030228 MS.gene03072:CDS
TATCCGCCGCAACCCTACGG+TGG 0.624811 2.1:+61029263 MS.gene03072:CDS
TTAATGGGAATTCAGCATGC+AGG 0.625390 2.1:+61029407 MS.gene03072:CDS
ATCATGTGTGGAAGAAGTCA+TGG 0.636060 2.1:-61025956 None:intergenic
TCTTCCACACATGATCCCAC+AGG 0.647344 2.1:+61025964 MS.gene03072:CDS
TGTCCACCGTAGGGTTGCGG+CGG 0.648752 2.1:-61029266 None:intergenic
AACCATTGGATGTCCACCGT+AGG 0.650023 2.1:-61029276 None:intergenic
AACCTGAGCATTATCAACAC+CGG 0.660808 2.1:-61026734 None:intergenic
AAAAGAGCAAGAGGATGTGG+AGG 0.665119 2.1:+61030224 MS.gene03072:CDS
AATACCTGTGGGATCATGTG+TGG 0.669627 2.1:-61025968 None:intergenic
TCCGGATATGGATAAGCAGG+TGG 0.669883 2.1:-61029197 None:intergenic
AAATTGTTGTCCAGATAACG+AGG 0.691918 2.1:+61026648 MS.gene03072:intron
AATCAGAAAAGAAAGTTACA+CGG 0.697568 2.1:+61029528 MS.gene03072:CDS
GCAAACGGAATTTCTCACGC+CGG 0.723309 2.1:+61026715 MS.gene03072:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACTAATAACATAATAA+TGG - chr2.1:61026497-61026516 None:intergenic 10.0%
!! TTAATAAAAAATGTATAATG+GGG + chr2.1:61029629-61029648 MS.gene03072:intron 10.0%
!!! AACATTTAAAATTTGAAAAT+TGG - chr2.1:61029916-61029935 None:intergenic 10.0%
!!! ACATTTAAAATTTGAAAATT+GGG - chr2.1:61029915-61029934 None:intergenic 10.0%
!!! TAAATGTATTAAATTTGTTA+AGG - chr2.1:61027638-61027657 None:intergenic 10.0%
!!! TTTTTTAATCTTAAAATTGA+AGG + chr2.1:61028932-61028951 MS.gene03072:intron 10.0%
!! AAATTAATAATGTCAGAAAT+TGG + chr2.1:61028654-61028673 MS.gene03072:intron 15.0%
!! CTAACTCATTTAAAAATTAA+AGG - chr2.1:61027082-61027101 None:intergenic 15.0%
!! TATCAGTACTTAAATATATT+AGG - chr2.1:61026137-61026156 None:intergenic 15.0%
!! TTGATAAAACAAAATCATTT+AGG + chr2.1:61026034-61026053 MS.gene03072:intron 15.0%
!!! CAAAGTTTACATTTTAAAAT+AGG - chr2.1:61029127-61029146 None:intergenic 15.0%
!!! TATTTTAACTTTTTGGTTTT+GGG + chr2.1:61027254-61027273 MS.gene03072:intron 15.0%
!!! TTATTTTAACTTTTTGGTTT+TGG + chr2.1:61027253-61027272 MS.gene03072:intron 15.0%
!!! TTCTGACATTATTAATTTTT+TGG - chr2.1:61028652-61028671 None:intergenic 15.0%
!! ATGCAAACTGAAAATAAAAA+AGG - chr2.1:61028120-61028139 None:intergenic 20.0%
!! TGATAGAATTATTGTAAACA+GGG + chr2.1:61026152-61026171 MS.gene03072:intron 20.0%
!! TGTAAATTAACATTACTTAG+AGG + chr2.1:61028866-61028885 MS.gene03072:intron 20.0%
!!! AAACTTTGTTTATGCTTTAA+CGG + chr2.1:61029139-61029158 MS.gene03072:intron 20.0%
!!! AATGAATTTCATTTTCTGAA+AGG - chr2.1:61028151-61028170 None:intergenic 20.0%
!!! AGACAATTTTAGTTTTTTGA+AGG + chr2.1:61027375-61027394 MS.gene03072:intron 20.0%
!!! CAAATTCTTTAGAATGTTTT+TGG + chr2.1:61026924-61026943 MS.gene03072:intron 20.0%
!!! TGCTTTTTGCATTTTATTAA+AGG + chr2.1:61029169-61029188 MS.gene03072:intron 20.0%
!!! TTATCATTTTTCAATTGCTA+GGG - chr2.1:61028175-61028194 None:intergenic 20.0%
!!! TTGTTTCTTATAAAAAGAAC+CGG - chr2.1:61027680-61027699 None:intergenic 20.0%
! AAAGAACTCAAAAATGTATC+AGG - chr2.1:61027349-61027368 None:intergenic 25.0%
! AATCAGAAAAGAAAGTTACA+CGG + chr2.1:61029528-61029547 MS.gene03072:CDS 25.0%
! AGAATTACTTCTTCAAATCA+TGG + chr2.1:61026082-61026101 MS.gene03072:intron 25.0%
! AGATCAAATCATCAAAATCA+AGG + chr2.1:61027701-61027720 MS.gene03072:intron 25.0%
! AGCCTACTTAAGTTATATTA+TGG + chr2.1:61030063-61030082 MS.gene03072:intron 25.0%
! ATCAGAATTGAGATTGATAT+TGG - chr2.1:61030318-61030337 None:intergenic 25.0%
! ATCTTTAAACAACATTCTCT+AGG + chr2.1:61026462-61026481 MS.gene03072:intron 25.0%
! ATGTGAGTCAAATAAATTGA+CGG - chr2.1:61030117-61030136 None:intergenic 25.0%
! ATTTGAAGAAGTAATTCTTC+TGG - chr2.1:61026080-61026099 None:intergenic 25.0%
! CATAAAAAACAACAGAAATG+TGG - chr2.1:61029098-61029117 None:intergenic 25.0%
! CTGATAGAATTATTGTAAAC+AGG + chr2.1:61026151-61026170 MS.gene03072:intron 25.0%
! GCCTACTTAAGTTATATTAT+GGG + chr2.1:61030064-61030083 MS.gene03072:intron 25.0%
! GTAAACTCCTAATACATTTA+GGG + chr2.1:61026202-61026221 MS.gene03072:intron 25.0%
! GTTATGTCATTGAAGAAAAT+TGG + chr2.1:61027016-61027035 MS.gene03072:intron 25.0%
! TATTTACAGGAAAATCTCTT+AGG + chr2.1:61025987-61026006 MS.gene03072:intron 25.0%
! TGTAAACTCCTAATACATTT+AGG + chr2.1:61026201-61026220 MS.gene03072:intron 25.0%
! TTGTTATGAAATCAAAATGG+AGG + chr2.1:61027785-61027804 MS.gene03072:intron 25.0%
!! ATTACATTTTGCACGTTTTT+GGG - chr2.1:61026600-61026619 None:intergenic 25.0%
!! TATTACATTTTGCACGTTTT+TGG - chr2.1:61026601-61026620 None:intergenic 25.0%
!! TATTTTCAGTTTGCATTTGT+CGG + chr2.1:61028124-61028143 MS.gene03072:intron 25.0%
!! TTTGTTTGATAACTAACTTC+AGG - chr2.1:61026631-61026650 None:intergenic 25.0%
!! TTTTTAAATGAGTTAGCTGT+TGG + chr2.1:61027086-61027105 MS.gene03072:intron 25.0%
!!! AACTTAAGTAGGCTTTAAAT+CGG - chr2.1:61030057-61030076 None:intergenic 25.0%
!!! CTTATCATTTTTCAATTGCT+AGG - chr2.1:61028176-61028195 None:intergenic 25.0%
!!! GCTGTTGATTTTTTGTAATT+CGG + chr2.1:61029313-61029332 MS.gene03072:intron 25.0%
AAAAGAAAGTTACACGGAAT+CGG + chr2.1:61029534-61029553 MS.gene03072:CDS 30.0%
AAAATTTGAAAATTGGGCTG+TGG - chr2.1:61029909-61029928 None:intergenic 30.0%
AAGAAATTAGAACGAACCAT+TGG - chr2.1:61029293-61029312 None:intergenic 30.0%
AAGGAAAAAAACTCACATGT+TGG + chr2.1:61027394-61027413 MS.gene03072:intron 30.0%
AATAAGCAGAAAACAGCTAA+TGG - chr2.1:61026307-61026326 None:intergenic 30.0%
AATGCTTGTCATCCTTTATA+TGG - chr2.1:61029774-61029793 None:intergenic 30.0%
AATGTCATAGAACTAAGAAG+TGG + chr2.1:61029013-61029032 MS.gene03072:intron 30.0%
AATTCCCATTAACTGAAGAT+TGG - chr2.1:61029399-61029418 None:intergenic 30.0%
ACATAAAACTTCAGATAGCA+TGG - chr2.1:61026536-61026555 None:intergenic 30.0%
AGCCTAAAAGTTAACTATTG+AGG + chr2.1:61027495-61027514 MS.gene03072:intron 30.0%
AGGAAAAAAACTCACATGTT+GGG + chr2.1:61027395-61027414 MS.gene03072:intron 30.0%
ATTCTGAATTTCTCAGAAGA+TGG + chr2.1:61028532-61028551 MS.gene03072:intron 30.0%
ATTGTCTTCATAAGCTATCT+TGG - chr2.1:61026342-61026361 None:intergenic 30.0%
CCTAAAAGTTAACTATTGAG+GGG + chr2.1:61027497-61027516 MS.gene03072:intron 30.0%
CTAAAAGTTAACTATTGAGG+GGG + chr2.1:61027498-61027517 MS.gene03072:intron 30.0%
CTTTATATGGAGAAAAAGCA+CGG - chr2.1:61029761-61029780 None:intergenic 30.0%
GCCCATAATATAACTTAAGT+AGG - chr2.1:61030068-61030087 None:intergenic 30.0%
GCCTAAAAGTTAACTATTGA+GGG + chr2.1:61027496-61027515 MS.gene03072:intron 30.0%
GCGTTGTTATGAAATCAAAA+TGG + chr2.1:61027782-61027801 MS.gene03072:intron 30.0%
GCTTCCTAATACCATAAAAA+AGG + chr2.1:61027995-61028014 MS.gene03072:intron 30.0%
TATGCAATTACACGTGTTAT+TGG + chr2.1:61027760-61027779 MS.gene03072:intron 30.0%
TCTTAATCAATTACTACCTC+CGG + chr2.1:61027658-61027677 MS.gene03072:intron 30.0%
TGATAACAATCTAAGAACCT+GGG + chr2.1:61027126-61027145 MS.gene03072:intron 30.0%
TGTGAGTCAAATAAATTGAC+GGG - chr2.1:61030116-61030135 None:intergenic 30.0%
TTTCTTATAAAAAGAACCGG+AGG - chr2.1:61027677-61027696 None:intergenic 30.0%
! ATTTTCAGTTTGCATTTGTC+GGG + chr2.1:61028125-61028144 MS.gene03072:intron 30.0%
! ATTTTCCTGTAAATACCTGT+GGG - chr2.1:61025982-61026001 None:intergenic 30.0%
! TGTTTTTCTTTTCAGCACTT+AGG + chr2.1:61028779-61028798 MS.gene03072:intron 30.0%
! TTAACTTTTAGGCTTTGCTT+GGG - chr2.1:61027489-61027508 None:intergenic 30.0%
! TTACATTTTGCACGTTTTTG+GGG - chr2.1:61026599-61026618 None:intergenic 30.0%
!! ATTAAATTTGTTAAGGCGCA+TGG - chr2.1:61027631-61027650 None:intergenic 30.0%
!! TTAAATTTGTTAAGGCGCAT+GGG - chr2.1:61027630-61027649 None:intergenic 30.0%
!! TTTTGAGAGCTTATGAAAAC+CGG + chr2.1:61026270-61026289 MS.gene03072:intron 30.0%
!!! AAGTTTTTTGAAGGTTTTGG+AGG - chr2.1:61027324-61027343 None:intergenic 30.0%
!!! AGGATTTTTTCAAGTGGTTT+TGG + chr2.1:61028752-61028771 MS.gene03072:intron 30.0%
!!! AGTTTTTTGAAGGTTTTGGA+GGG - chr2.1:61027323-61027342 None:intergenic 30.0%
!!! CTCTCCTTTTTTATGGTATT+AGG - chr2.1:61028002-61028021 None:intergenic 30.0%
!!! GAGAAGTTTTTTGAAGGTTT+TGG - chr2.1:61027327-61027346 None:intergenic 30.0%
!!! GGCATTTTTATTTTCTGATG+TGG + chr2.1:61026008-61026027 MS.gene03072:intron 30.0%
!!! GTTGATTTTTTGTAATTCGG+TGG + chr2.1:61029316-61029335 MS.gene03072:intron 30.0%
!!! TAAATCGGTGTTTTGAAAAC+CGG - chr2.1:61030042-61030061 None:intergenic 30.0%
!!! TACTCTTCTCTCCTTTTTTA+TGG - chr2.1:61028009-61028028 None:intergenic 30.0%
!!! TATCAGGAGAAGTTTTTTGA+AGG - chr2.1:61027333-61027352 None:intergenic 30.0%
AAACAGGCCCTAAATGTATT+AGG - chr2.1:61026212-61026231 None:intergenic 35.0%
AAAGAAGCCACAAGAGAAAA+GGG - chr2.1:61029576-61029595 None:intergenic 35.0%
AAATTGTTGTCCAGATAACG+AGG + chr2.1:61026648-61026667 MS.gene03072:intron 35.0%
AACATGTTCATGTTGGATCA+TGG + chr2.1:61028309-61028328 MS.gene03072:intron 35.0%
AATCCTAGCATCAAGTAACA+TGG - chr2.1:61028738-61028757 None:intergenic 35.0%
ACAACAAATTTCCAGGAACT+AGG - chr2.1:61029070-61029089 None:intergenic 35.0%
ACTTCAGGAGAAATGAAGAA+GGG - chr2.1:61027446-61027465 None:intergenic 35.0%
AGATGAGAATCAACAAGATG+AGG + chr2.1:61030268-61030287 MS.gene03072:CDS 35.0%
AGTAGAGTCTTGGGTATTAT+GGG - chr2.1:61027588-61027607 None:intergenic 35.0%
CAACAAATTTCCAGGAACTA+GGG - chr2.1:61029069-61029088 None:intergenic 35.0%
CTTCTTCAAATCATGGTTGT+CGG + chr2.1:61026089-61026108 MS.gene03072:intron 35.0%
GAAAAAAACTCACATGTTGG+GGG + chr2.1:61027397-61027416 MS.gene03072:intron 35.0%
GAAAAATGATAAGCCGTTTG+AGG + chr2.1:61028183-61028202 MS.gene03072:intron 35.0%
GAAATTCCGTTTGCAGATAT+AGG - chr2.1:61026709-61026728 None:intergenic 35.0%
GATAACAATCTAAGAACCTG+GGG + chr2.1:61027127-61027146 MS.gene03072:intron 35.0%
GATTAAATTACCCTAGTTCC+TGG + chr2.1:61029056-61029075 MS.gene03072:intron 35.0%
GGAAAAAAACTCACATGTTG+GGG + chr2.1:61027396-61027415 MS.gene03072:intron 35.0%
GGAAGAACCAAACAACTTAA+TGG + chr2.1:61027519-61027538 MS.gene03072:intron 35.0%
GGCAAAAACAACAAATTTCC+AGG - chr2.1:61029077-61029096 None:intergenic 35.0%
GTACATTCATAGATGATGCA+TGG - chr2.1:61030144-61030163 None:intergenic 35.0%
GTATAGAACCATTCCTCAAA+CGG - chr2.1:61028199-61028218 None:intergenic 35.0%
GTCAATGCAAAACAGTATCA+TGG + chr2.1:61029470-61029489 MS.gene03072:CDS 35.0%
GTGAGTCAAATAAATTGACG+GGG - chr2.1:61030115-61030134 None:intergenic 35.0%
GTGATAACAATCTAAGAACC+TGG + chr2.1:61027125-61027144 MS.gene03072:intron 35.0%
TAGTAGAGTCTTGGGTATTA+TGG - chr2.1:61027589-61027608 None:intergenic 35.0%
TCAAACAAGTCAATCCAAAC+AGG - chr2.1:61026228-61026247 None:intergenic 35.0%
TCAAAGCAAAAGCAGGAATT+TGG - chr2.1:61027951-61027970 None:intergenic 35.0%
! AATCAAGGAAGTGCACTTAA+AGG + chr2.1:61027716-61027735 MS.gene03072:intron 35.0%
! ATTGCAAACTGTCTGAAGTT+CGG + chr2.1:61028842-61028861 MS.gene03072:intron 35.0%
! CCCCTCAATAGTTAACTTTT+AGG - chr2.1:61027500-61027519 None:intergenic 35.0%
! GATTTTCCTGTAAATACCTG+TGG - chr2.1:61025983-61026002 None:intergenic 35.0%
! GTTAACTTTTAGGCTTTGCT+TGG - chr2.1:61027490-61027509 None:intergenic 35.0%
! TAATACATTTAGGGCCTGTT+TGG + chr2.1:61026211-61026230 MS.gene03072:intron 35.0%
!! TATAATGGGGAGAAGTTTTC+TGG + chr2.1:61029642-61029661 MS.gene03072:intron 35.0%
!! TGTTTTGCATTGACAAACAC+AGG - chr2.1:61029464-61029483 None:intergenic 35.0%
!! TTTTAAAAACCAGACCAAGC+CGG + chr2.1:61029819-61029838 MS.gene03072:intron 35.0%
!!! ATCATGGTATTTTAAGACGC+AGG + chr2.1:61029486-61029505 MS.gene03072:CDS 35.0%
!!! CGTGCTTTTTCTCCATATAA+AGG + chr2.1:61029759-61029778 MS.gene03072:intron 35.0%
!!! GATGCTAGGATTTTTTCAAG+TGG + chr2.1:61028746-61028765 MS.gene03072:intron 35.0%
AAAGAACTTGGAGAATGGAG+AGG + chr2.1:61027196-61027215 MS.gene03072:intron 40.0%
AAAGATCTGTGACCTTGATC+TGG + chr2.1:61029681-61029700 MS.gene03072:intron 40.0%
AACCTGAGCATTATCAACAC+CGG - chr2.1:61026737-61026756 None:intergenic 40.0%
AAGAAGCCACAAGAGAAAAG+GGG - chr2.1:61029575-61029594 None:intergenic 40.0%
AAGATCTGTGACCTTGATCT+GGG + chr2.1:61029682-61029701 MS.gene03072:intron 40.0%
AAGGGAAAGAACTTGGAGAA+TGG + chr2.1:61027191-61027210 MS.gene03072:intron 40.0%
AATGAAGAAGGGAAGGAAAG+TGG - chr2.1:61027435-61027454 None:intergenic 40.0%
ACTCCCAAACAAACCCTTAA+TGG - chr2.1:61027159-61027178 None:intergenic 40.0%
AGATATCAAGACCCAGATCA+AGG - chr2.1:61029696-61029715 None:intergenic 40.0%
AGCAAAGATGCTTCTGTAGT+AGG - chr2.1:61029225-61029244 None:intergenic 40.0%
AGCCATACTTGCATGAATCA+CGG + chr2.1:61030186-61030205 MS.gene03072:intron 40.0%
ATGATAAGCCGTTTGAGGAA+TGG + chr2.1:61028188-61028207 MS.gene03072:intron 40.0%
ATGATCCCACAGGTATTTAC+AGG + chr2.1:61025974-61025993 MS.gene03072:intron 40.0%
ATGCAGCCTATATCTGCAAA+CGG + chr2.1:61026700-61026719 MS.gene03072:CDS 40.0%
ATTGAACCATATTCTGTGCC+AGG + chr2.1:61029373-61029392 MS.gene03072:intron 40.0%
CACAAGAGAAAAGGGGATAA+TGG - chr2.1:61029568-61029587 None:intergenic 40.0%
CAGGCCAATCTTCAGTTAAT+GGG + chr2.1:61029392-61029411 MS.gene03072:intron 40.0%
CATTACTTAGAGGTAGCGAT+TGG + chr2.1:61028876-61028895 MS.gene03072:intron 40.0%
CCAATTAAACCATGACCTGA+AGG + chr2.1:61029994-61030013 MS.gene03072:intron 40.0%
CCTTCAGGTCATGGTTTAAT+TGG - chr2.1:61029997-61030016 None:intergenic 40.0%
CTTCACAGTAGTAGAGTCTT+GGG - chr2.1:61027597-61027616 None:intergenic 40.0%
GAAAGAAGCCACAAGAGAAA+AGG - chr2.1:61029577-61029596 None:intergenic 40.0%
GAATTTCTCAGAAGATGGCT+TGG + chr2.1:61028537-61028556 MS.gene03072:intron 40.0%
GACGTTGAAGGCAATCATAA+GGG + chr2.1:61027969-61027988 MS.gene03072:intron 40.0%
GACTTCAGGAGAAATGAAGA+AGG - chr2.1:61027447-61027466 None:intergenic 40.0%
GAGAATCAACAAGATGAGGT+TGG + chr2.1:61030272-61030291 MS.gene03072:CDS 40.0%
GCAAAGATGCTTCTGTAGTA+GGG - chr2.1:61029224-61029243 None:intergenic 40.0%
GGATAAGGTTGTGCATCATA+GGG - chr2.1:61029248-61029267 None:intergenic 40.0%
GTAAGGCAACATGTTCATGT+TGG + chr2.1:61028302-61028321 MS.gene03072:intron 40.0%
TCTCTTGTGGCTTCTTTCTA+TGG + chr2.1:61029579-61029598 MS.gene03072:intron 40.0%
TGACGTTGAAGGCAATCATA+AGG + chr2.1:61027968-61027987 MS.gene03072:intron 40.0%
TGATCTGGGTCTTGATATCT+AGG + chr2.1:61029696-61029715 MS.gene03072:intron 40.0%
TTAATGGGAATTCAGCATGC+AGG + chr2.1:61029407-61029426 MS.gene03072:CDS 40.0%
TTCAACGTCAAAGCAAAAGC+AGG - chr2.1:61027958-61027977 None:intergenic 40.0%
TTCAGTCCTCGATAGCAAAA+TGG - chr2.1:61028377-61028396 None:intergenic 40.0%
TTTAAAAACCAGACCAAGCC+GGG + chr2.1:61029820-61029839 MS.gene03072:intron 40.0%
! CATTATCCCCTTTTCTCTTG+TGG + chr2.1:61029566-61029585 MS.gene03072:intron 40.0%
! CCTCCATTAAGGGTTTGTTT+GGG + chr2.1:61027153-61027172 MS.gene03072:intron 40.0%
! GAACCATGTTACTTGATGCT+AGG + chr2.1:61028732-61028751 MS.gene03072:intron 40.0%
! GCTAATGGACAAGTCATAAC+CGG - chr2.1:61026292-61026311 None:intergenic 40.0%
! GGTGAAGCCATTAAGTTGTT+TGG - chr2.1:61027529-61027548 None:intergenic 40.0%
! GGTTTGTTTGGGAGTTAGAA+GGG + chr2.1:61027164-61027183 MS.gene03072:intron 40.0%
! GTAATGAGCGTGTCATGTTT+TGG + chr2.1:61028565-61028584 MS.gene03072:intron 40.0%
! TCCTCCATTAAGGGTTTGTT+TGG + chr2.1:61027152-61027171 MS.gene03072:intron 40.0%
! TGCTTTTGCTTTGACGTTGA+AGG + chr2.1:61027957-61027976 MS.gene03072:intron 40.0%
!! ATAGGACTAGTCAAAGGCAT+CGG - chr2.1:61026569-61026588 None:intergenic 40.0%
!! CTTCACTTGTTTGCTATCCT+TGG + chr2.1:61026860-61026879 MS.gene03072:intron 40.0%
AAAAGAGCAAGAGGATGTGG+AGG + chr2.1:61030224-61030243 MS.gene03072:CDS 45.0%
AAAAGCAGGAATTTGGCTGC+AGG - chr2.1:61027944-61027963 None:intergenic 45.0%
AACCAGACTGCGATATAACC+GGG - chr2.1:61029873-61029892 None:intergenic 45.0%
AAGAAGGGAAGGAAAGTGGA+AGG - chr2.1:61027431-61027450 None:intergenic 45.0%
AATACCTGTGGGATCATGTG+TGG - chr2.1:61025971-61025990 None:intergenic 45.0%
ACCACCTGCTTATCCATATC+CGG + chr2.1:61029196-61029215 MS.gene03072:CDS 45.0%
AGAAGGGAAGGAAAGTGGAA+GGG - chr2.1:61027430-61027449 None:intergenic 45.0%
AGACTCTACTACTGTGAAGG+TGG + chr2.1:61027598-61027617 MS.gene03072:intron 45.0%
AGATTGGAGGGAACCAAGAT+GGG - chr2.1:61028055-61028074 None:intergenic 45.0%
AGCTTTCACAGTGTTGCAGT+TGG - chr2.1:61027916-61027935 None:intergenic 45.0%
ATATCGCAGTCTGGTTGAAC+TGG + chr2.1:61029877-61029896 MS.gene03072:intron 45.0%
ATCAAACTGGTGAGACCTTC+AGG - chr2.1:61030012-61030031 None:intergenic 45.0%
ATGCTTCTGTAGTAGGGATC+CGG - chr2.1:61029218-61029237 None:intergenic 45.0%
ATGTTGGATCATGGTCGTTC+TGG + chr2.1:61028318-61028337 MS.gene03072:intron 45.0%
CAACCAGACTGCGATATAAC+CGG - chr2.1:61029874-61029893 None:intergenic 45.0%
CACTTCCAATAAGAGAGCCA+AGG - chr2.1:61026880-61026899 None:intergenic 45.0%
CAGGAGAAATGAAGAAGGGA+AGG - chr2.1:61027442-61027461 None:intergenic 45.0%
CATCTCATGCTTCTCGATGT+GGG + chr2.1:61027552-61027571 MS.gene03072:intron 45.0%
CCAAGACTCTACTACTGTGA+AGG + chr2.1:61027595-61027614 MS.gene03072:intron 45.0%
CCAGGCCAATCTTCAGTTAA+TGG + chr2.1:61029391-61029410 MS.gene03072:intron 45.0%
CCCAAACAAACCCTTAATGG+AGG - chr2.1:61027156-61027175 None:intergenic 45.0%
CCTTCACAGTAGTAGAGTCT+TGG - chr2.1:61027598-61027617 None:intergenic 45.0%
CGGATAAGGTTGTGCATCAT+AGG - chr2.1:61029249-61029268 None:intergenic 45.0%
CTGAAAAGAGCAAGAGGATG+TGG + chr2.1:61030221-61030240 MS.gene03072:CDS 45.0%
CTGTGATAGCTACAACGAGA+CGG - chr2.1:61026976-61026995 None:intergenic 45.0%
CTTGGGAGTAATGAGGGAAA+GGG - chr2.1:61027472-61027491 None:intergenic 45.0%
GAAAGTTACACGGAATCGGA+AGG + chr2.1:61029538-61029557 MS.gene03072:CDS 45.0%
GACTCTACTACTGTGAAGGT+GGG + chr2.1:61027599-61027618 MS.gene03072:intron 45.0%
GCAAACATGTTGTGAAGCTG+CGG - chr2.1:61028078-61028097 None:intergenic 45.0%
GCTATCACAGATGCACATTG+TGG + chr2.1:61026986-61027005 MS.gene03072:intron 45.0%
GCTTTCACAGTGTTGCAGTT+GGG - chr2.1:61027915-61027934 None:intergenic 45.0%
GCTTTGCTTGGGAGTAATGA+GGG - chr2.1:61027478-61027497 None:intergenic 45.0%
GGGAGAAAAGGGAAAGAACT+TGG + chr2.1:61027184-61027203 MS.gene03072:intron 45.0%
GGGAGTTAGAAGGGAGAAAA+GGG + chr2.1:61027173-61027192 MS.gene03072:intron 45.0%
GGTCAAATGCAGTCACATTG+CGG - chr2.1:61029740-61029759 None:intergenic 45.0%
GTTCTGCATTGCCAAACAGT+AGG + chr2.1:61028231-61028250 MS.gene03072:intron 45.0%
TATCGCAGTCTGGTTGAACT+GGG + chr2.1:61029878-61029897 MS.gene03072:intron 45.0%
TCAACTGCATCAGTTGGCAA+AGG - chr2.1:61029437-61029456 None:intergenic 45.0%
TCTCAATGCAAAACGACAGC+AGG - chr2.1:61028349-61028368 None:intergenic 45.0%
TGCCGTGATTCATGCAAGTA+TGG - chr2.1:61030191-61030210 None:intergenic 45.0%
TGGGAGTTAGAAGGGAGAAA+AGG + chr2.1:61027172-61027191 MS.gene03072:intron 45.0%
TGTTGCAGTTGGGAGATCAA+TGG - chr2.1:61027905-61027924 None:intergenic 45.0%
TTTGCCAACTGATGCAGTTG+AGG + chr2.1:61029436-61029455 MS.gene03072:CDS 45.0%
! AATGGGGAGAAGTTTTCTGG+AGG + chr2.1:61029645-61029664 MS.gene03072:intron 45.0%
! ATCGAGAAGCATGAGATGCT+CGG - chr2.1:61027550-61027569 None:intergenic 45.0%
! CCATTAACTGAAGATTGGCC+TGG - chr2.1:61029394-61029413 None:intergenic 45.0%
! CTTGGCTCTCTTATTGGAAG+TGG + chr2.1:61026878-61026897 MS.gene03072:intron 45.0%
! CTTTGACTAGTCCTATTCCC+TGG + chr2.1:61026573-61026592 MS.gene03072:intron 45.0%
! GCTATCCTTGGCTCTCTTAT+TGG + chr2.1:61026872-61026891 MS.gene03072:intron 45.0%
! GGGTTTGTTTGGGAGTTAGA+AGG + chr2.1:61027163-61027182 MS.gene03072:intron 45.0%
!! AACACGCCATTTTGCTATCG+AGG + chr2.1:61028368-61028387 MS.gene03072:intron 45.0%
!! CAGGGAATAGGACTAGTCAA+AGG - chr2.1:61026575-61026594 None:intergenic 45.0%
!! GTAGTCTTGTGGTGACTCTA+TGG + chr2.1:61028443-61028462 MS.gene03072:intron 45.0%
!! TTTAATAAAAAATGTATAAT+GGG + chr2.1:61029628-61029647 MS.gene03072:intron 5.0%
!!! TTATTTTTATTTTAACTTTT+TGG + chr2.1:61027247-61027266 MS.gene03072:intron 5.0%
!!! TTTTAATAAAAAATGTATAA+TGG + chr2.1:61029627-61029646 MS.gene03072:intron 5.0%
AACCATTGGATGTCCACCGT+AGG - chr2.1:61029279-61029298 None:intergenic 50.0%
AACCGGACCAGAGATCAAAC+TGG - chr2.1:61030025-61030044 None:intergenic 50.0%
AAGAAGTGGCTGCTCAGACT+TGG + chr2.1:61029027-61029046 MS.gene03072:intron 50.0%
AAGTGCACCACCTTGTGACA+TGG + chr2.1:61028395-61028414 MS.gene03072:intron 50.0%
ACCATTGGATGTCCACCGTA+GGG - chr2.1:61029278-61029297 None:intergenic 50.0%
ACCTGGGGAATCCTCCATTA+AGG + chr2.1:61027142-61027161 MS.gene03072:intron 50.0%
ATCCCGGTTATATCGCAGTC+TGG + chr2.1:61029868-61029887 MS.gene03072:intron 50.0%
CAAGATGGGAGGATGAGGAA+AGG - chr2.1:61028041-61028060 None:intergenic 50.0%
CACCAGTTTGATCTCTGGTC+CGG + chr2.1:61030020-61030039 MS.gene03072:intron 50.0%
CCTGGGGAATCCTCCATTAA+GGG + chr2.1:61027143-61027162 MS.gene03072:intron 50.0%
CTGTAGTAGGGATCCGGATA+TGG - chr2.1:61029212-61029231 None:intergenic 50.0%
CTTGGAGAATGGAGAGGAGA+CGG + chr2.1:61027202-61027221 MS.gene03072:intron 50.0%
CTTGTGACATGGTCCTGTGT+CGG + chr2.1:61028406-61028425 MS.gene03072:intron 50.0%
CTTTCCTCATCCTCCCATCT+TGG + chr2.1:61028039-61028058 MS.gene03072:intron 50.0%
GAGATCAATGGATGGTGAGG+GGG - chr2.1:61027893-61027912 None:intergenic 50.0%
GAGATTGGAGGGAACCAAGA+TGG - chr2.1:61028056-61028075 None:intergenic 50.0%
GATAGCTACAACGAGACGGA+GGG - chr2.1:61026972-61026991 None:intergenic 50.0%
GATGCGGTTGCAAGATGGTA+AGG + chr2.1:61028285-61028304 MS.gene03072:intron 50.0%
GCAAACGGAATTTCTCACGC+CGG + chr2.1:61026715-61026734 MS.gene03072:CDS 50.0%
GCAGTTGGGAGATCAATGGA+TGG - chr2.1:61027901-61027920 None:intergenic 50.0%
GCATCTCATGCTTCTCGATG+TGG + chr2.1:61027551-61027570 MS.gene03072:intron 50.0%
GCGATTCTCTGCCTACTGTT+TGG - chr2.1:61028245-61028264 None:intergenic 50.0%
GCTTGGGAGTAATGAGGGAA+AGG - chr2.1:61027473-61027492 None:intergenic 50.0%
GGAGATCAATGGATGGTGAG+GGG - chr2.1:61027894-61027913 None:intergenic 50.0%
GGATATGGATAAGCAGGTGG+TGG - chr2.1:61029197-61029216 None:intergenic 50.0%
GGATCCGGATATGGATAAGC+AGG - chr2.1:61029203-61029222 None:intergenic 50.0%
GGCTTTGCTTGGGAGTAATG+AGG - chr2.1:61027479-61027498 None:intergenic 50.0%
GGGAAGACAGCAGTGTTACA+CGG - chr2.1:61027851-61027870 None:intergenic 50.0%
GGGAGATCAATGGATGGTGA+GGG - chr2.1:61027895-61027914 None:intergenic 50.0%
GGTCTCACCAGTTTGATCTC+TGG + chr2.1:61030015-61030034 MS.gene03072:intron 50.0%
TCCGGATATGGATAAGCAGG+TGG - chr2.1:61029200-61029219 None:intergenic 50.0%
TCTTCCACACATGATCCCAC+AGG + chr2.1:61025964-61025983 MS.gene03072:CDS 50.0%
TGAGGGAAAGGGAAGACTTC+AGG - chr2.1:61027461-61027480 None:intergenic 50.0%
TGATAGCTACAACGAGACGG+AGG - chr2.1:61026973-61026992 None:intergenic 50.0%
TGCTTCTCGATGTGGGACAT+AGG + chr2.1:61027559-61027578 MS.gene03072:intron 50.0%
TGGGAGATCAATGGATGGTG+AGG - chr2.1:61027896-61027915 None:intergenic 50.0%
TGTCCAGATAACGAGGCTGA+TGG + chr2.1:61026655-61026674 MS.gene03072:intron 50.0%
TGTCCATCAGCCTCGTTATC+TGG - chr2.1:61026661-61026680 None:intergenic 50.0%
TGTTGTGAAGCTGCGGAGAT+TGG - chr2.1:61028071-61028090 None:intergenic 50.0%
! TGCACACAACGGTAGTCTTG+TGG + chr2.1:61028432-61028451 MS.gene03072:intron 50.0%
!! CACGCTCTGAAAAGAGCAAG+AGG + chr2.1:61030215-61030234 MS.gene03072:CDS 50.0%
!! GATTGGCCTGGCACAGAATA+TGG - chr2.1:61029382-61029401 None:intergenic 50.0%
!! TTTGGTGGTTGGTCTGATCC+CGG + chr2.1:61029852-61029871 MS.gene03072:intron 50.0%
!!! TTTGCACGTTTTTGGGGCCA+GGG - chr2.1:61026593-61026612 None:intergenic 50.0%
!!! TTTTGCACGTTTTTGGGGCC+AGG - chr2.1:61026594-61026613 None:intergenic 50.0%
AAACCAGACCAAGCCGGGAT+CGG + chr2.1:61029825-61029844 MS.gene03072:intron 55.0%
ACCACCAAACTGACCGATCC+CGG - chr2.1:61029841-61029860 None:intergenic 55.0%
ACCAGGTGAACAGAGCGATG+CGG + chr2.1:61028269-61028288 MS.gene03072:intron 55.0%
ACCCTACGGTGGACATCCAA+TGG + chr2.1:61029274-61029293 MS.gene03072:CDS 55.0%
AGAGCGATGCGGTTGCAAGA+TGG + chr2.1:61028280-61028299 MS.gene03072:intron 55.0%
CACAGGACCATGTCACAAGG+TGG - chr2.1:61028405-61028424 None:intergenic 55.0%
CCCTTAATGGAGGATTCCCC+AGG - chr2.1:61027146-61027165 None:intergenic 55.0%
CGACACAGGACCATGTCACA+AGG - chr2.1:61028408-61028427 None:intergenic 55.0%
CTGGTGAGACCTTCAGGTCA+TGG - chr2.1:61030006-61030025 None:intergenic 55.0%
GAGCAAGAGGATGTGGAGGT+CGG + chr2.1:61030228-61030247 MS.gene03072:CDS 55.0%
GGAACCAAGATGGGAGGATG+AGG - chr2.1:61028046-61028065 None:intergenic 55.0%
GGCTCCTCAACTGCATCAGT+TGG - chr2.1:61029443-61029462 None:intergenic 55.0%
GTGAAGCTGCGGAGATTGGA+GGG - chr2.1:61028067-61028086 None:intergenic 55.0%
TATGCAGCACCTCCACAGCT+TGG + chr2.1:61026763-61026782 MS.gene03072:CDS 55.0%
TGGAGAGGAGACGGAAGAGA+AGG + chr2.1:61027211-61027230 MS.gene03072:intron 55.0%
TGTGAAGCTGCGGAGATTGG+AGG - chr2.1:61028068-61028087 None:intergenic 55.0%
TTGGAGGGAACCAAGATGGG+AGG - chr2.1:61028052-61028071 None:intergenic 55.0%
! GGATCGGTCAGTTTGGTGGT+TGG + chr2.1:61029841-61029860 MS.gene03072:intron 55.0%
!! CGCCGGTGTTGATAATGCTC+AGG + chr2.1:61026732-61026751 MS.gene03072:CDS 55.0%
!! TGTGTCGGTGCTGCACACAA+CGG + chr2.1:61028421-61028440 MS.gene03072:intron 55.0%
!!! CGTTTTTGGGGCCAGGGAAT+AGG - chr2.1:61026587-61026606 None:intergenic 55.0%
ACCGCATCGCTCTGTTCACC+TGG - chr2.1:61028273-61028292 None:intergenic 60.0%
AGCACCTCCACAGCTTGGCA+CGG + chr2.1:61026768-61026787 MS.gene03072:CDS 60.0%
ATGGTGAGGGGGACAGAGTG+GGG - chr2.1:61027882-61027901 None:intergenic 60.0%
CAAACTGACCGATCCCGGCT+TGG - chr2.1:61029836-61029855 None:intergenic 60.0%
CAAGCCGGGATCGGTCAGTT+TGG + chr2.1:61029834-61029853 MS.gene03072:intron 60.0%
CCTTATCCGCCGCAACCCTA+CGG + chr2.1:61029260-61029279 MS.gene03072:CDS 60.0%
GACAGAGTGGGGAGGAGGTT+GGG - chr2.1:61027871-61027890 None:intergenic 60.0%
GATGGTGAGGGGGACAGAGT+GGG - chr2.1:61027883-61027902 None:intergenic 60.0%
GGATGTCCACCGTAGGGTTG+CGG - chr2.1:61029272-61029291 None:intergenic 60.0%
GGCAGAGAATCGCAACGACC+AGG + chr2.1:61028252-61028271 MS.gene03072:intron 60.0%
!! ACGAGACGGAGGGCATCGAA+TGG - chr2.1:61026962-61026981 None:intergenic 60.0%
!! GTTGTGTGCAGCACCGACAC+AGG - chr2.1:61028422-61028441 None:intergenic 60.0%
CACCTCCACAGCTTGGCACG+GGG + chr2.1:61026770-61026789 MS.gene03072:CDS 65.0%
CCGTAGGGTTGCGGCGGATA+AGG - chr2.1:61029263-61029282 None:intergenic 65.0%
GCACCTCCACAGCTTGGCAC+GGG + chr2.1:61026769-61026788 MS.gene03072:CDS 65.0%
GCCGGGATCGGTCAGTTTGG+TGG + chr2.1:61029837-61029856 MS.gene03072:intron 65.0%
GCTTGGCACGGGGCATGCTA+TGG + chr2.1:61026780-61026799 MS.gene03072:CDS 65.0%
GGACAGAGTGGGGAGGAGGT+TGG - chr2.1:61027872-61027891 None:intergenic 65.0%
GGATGGTGAGGGGGACAGAG+TGG - chr2.1:61027884-61027903 None:intergenic 65.0%
TATCCGCCGCAACCCTACGG+TGG + chr2.1:61029263-61029282 MS.gene03072:CDS 65.0%
TGTCCACCGTAGGGTTGCGG+CGG - chr2.1:61029269-61029288 None:intergenic 65.0%
!! CGGAGGGCATCGAATGGCTG+TGG - chr2.1:61026956-61026975 None:intergenic 65.0%
!! TGACCGATCCCGGCTTGGTC+TGG - chr2.1:61029831-61029850 None:intergenic 65.0%
AGGGGGACAGAGTGGGGAGG+AGG - chr2.1:61027876-61027895 None:intergenic 70.0%
GCATGCCCCGTGCCAAGCTG+TGG - chr2.1:61026778-61026797 None:intergenic 70.0%
GTGAGGGGGACAGAGTGGGG+AGG - chr2.1:61027879-61027898 None:intergenic 70.0%
TGCCCCGTGCCAAGCTGTGG+AGG - chr2.1:61026775-61026794 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 61025958 61030373 61025958 ID=MS.gene03072
chr2.1 mRNA 61025958 61030373 61025958 ID=MS.gene03072.t1;Parent=MS.gene03072
chr2.1 exon 61025958 61025985 61025958 ID=MS.gene03072.t1.exon1;Parent=MS.gene03072.t1
chr2.1 CDS 61025958 61025985 61025958 ID=cds.MS.gene03072.t1;Parent=MS.gene03072.t1
chr2.1 exon 61026662 61026801 61026662 ID=MS.gene03072.t1.exon2;Parent=MS.gene03072.t1
chr2.1 CDS 61026662 61026801 61026662 ID=cds.MS.gene03072.t1;Parent=MS.gene03072.t1
chr2.1 exon 61029191 61029295 61029191 ID=MS.gene03072.t1.exon3;Parent=MS.gene03072.t1
chr2.1 CDS 61029191 61029295 61029191 ID=cds.MS.gene03072.t1;Parent=MS.gene03072.t1
chr2.1 exon 61029395 61029559 61029395 ID=MS.gene03072.t1.exon4;Parent=MS.gene03072.t1
chr2.1 CDS 61029395 61029559 61029395 ID=cds.MS.gene03072.t1;Parent=MS.gene03072.t1
chr2.1 exon 61030188 61030373 61030188 ID=MS.gene03072.t1.exon5;Parent=MS.gene03072.t1
chr2.1 CDS 61030188 61030373 61030188 ID=cds.MS.gene03072.t1;Parent=MS.gene03072.t1
Gene Sequence

>MS.gene03072

ATGACTTCTTCCACACATGATCCCACAGGTATTTACAGGAAAATCTCTTAGGCATTTTTATTTTCTGATGTGGTCATTGATAAAACAAAATCATTTAGGAGAAGTACATAACATGAATTCCAGAAGAATTACTTCTTCAAATCATGGTTGTCGGATTATAAATAGAACTGTAAGCTCCTAATATATTTAAGTACTGATAGAATTATTGTAAACAGGGTAATTATTTTATTACGCATCTAGAACTGTAAACTCCTAATACATTTAGGGCCTGTTTGGATTGACTTGTTTGAGCTTTTGCACTTGTAGCAATGTTTTTGAGAGCTTATGAAAACCGGTTATGACTTGTCCATTAGCTGTTTTCTGCTTATTTTCATTAGTTCTCCAAGATAGCTTATGAAGACAATATATAGTTTATATTGATAATAGTTTGACTTTATTTTATCTTTGTTAAAAAAATAGCTTATACATAAACACTTTTATGATAAGTGCTTAATTTAGCTGTTTATCTTTAAACAACATTCTCTAGGTTGACTTTTCCATTATTATGTTATTAGTTTTTGTATTGAGCTTCTTTTCCATGCTATCTGAAGTTTTATGTGTTTCTTAAACCGATGCCTTTGACTAGTCCTATTCCCTGGCCCCAAAAACGTGCAAAATGTAATATCTGAAGCCTGAAGTTAGTTATCAAACAAATTGTTGTCCAGATAACGAGGCTGATGGACAGCAGCAGTCAGAATCACAGATGCAGCCTATATCTGCAAACGGAATTTCTCACGCCGGTGTTGATAATGCTCAGGTTGTTCAGTATGCAGCACCTCCACAGCTTGGCACGGGGCATGCTATGGTATGAACTTCACATTTTATTTGCGTTCTTTTGTTGTCTCTAAAAACAAAACATGTTTCTTCACTTGTTTGCTATCCTTGGCTCTCTTATTGGAAGTGGCGTCTGAATGTTTAATTACTTCACAAATTCTTTAGAATGTTTTTGGTTTAAGCCACAGCCATTCGATGCCCTCCGTCTCGTTGTAGCTATCACAGATGCACATTGTGGCAATTTTGTTATGTCATTGAAGAAAATTGGTTCTGAAGTCATGTTGAAATTTGTTTTCAAGTTTGTTGTTCCTTTAATTTTTAAATGAGTTAGCTGTTGGCACTCTTCTGAACTGTGTGATAACAATCTAAGAACCTGGGGAATCCTCCATTAAGGGTTTGTTTGGGAGTTAGAAGGGAGAAAAGGGAAAGAACTTGGAGAATGGAGAGGAGACGGAAGAGAAGGAGAATGATTATGATTATTTTTATTTTAACTTTTTGGTTTTGGGAGTACTATATAAAGAGAAAAATGATTTAAAGAATTTGATAAAGCCCTCCAAAACCTTCAAAAAACTTCTCCTGATACATTTTTGAGTTCTTTCATATTAGACAATTTTAGTTTTTTGAAGGAAAAAAACTCACATGTTGGGGGCTATCATCCCTTCCACTTTCCTTCCCTTCTTCATTTCTCCTGAAGTCTTCCCTTTCCCTCATTACTCCCAAGCAAAGCCTAAAAGTTAACTATTGAGGGGGAAGAACCAAACAACTTAATGGCTTCACCGAGCATCTCATGCTTCTCGATGTGGGACATAGGTATCCCATAATACCCAAGACTCTACTACTGTGAAGGTGGGAATTTCCCATGCGCCTTAACAAATTTAATACATTTATCTTAATCAATTACTACCTCCGGTTCTTTTTATAAGAAACAAAAGATCAAATCATCAAAATCAAGGAAGTGCACTTAAAGGAGTTAACAAAGACAAAACTTATATGCAATTACACGTGTTATTGGCGTTGTTATGAAATCAAAATGGAGGAAGCAGACTTTTATTTAGATCTACTTAAATTAGTTAATGTCCGTGTAACACTGCTGTCTTCCCAACCTCCTCCCCACTCTGTCCCCCTCACCATCCATTGATCTCCCAACTGCAACACTGTGAAAGCTTTCTTCCTGCAGCCAAATTCCTGCTTTTGCTTTGACGTTGAAGGCAATCATAAGGGAGAGCTTCCTAATACCATAAAAAAGGAGAGAAGAGTAAGTGATCATCCTTTCCTCATCCTCCCATCTTGGTTCCCTCCAATCTCCGCAGCTTCACAACATGTTTGCGTCACTTATCTACTCAATTCCTTTTTTATTTTCAGTTTGCATTTGTCGGGCCTTTCAGAAAATGAAATTCATTGCCCTAGCAATTGAAAAATGATAAGCCGTTTGAGGAATGGTTCTATACTGCAACGTTTTCGTTCTGCATTGCCAAACAGTAGGCAGAGAATCGCAACGACCAGGTGAACAGAGCGATGCGGTTGCAAGATGGTAAGGCAACATGTTCATGTTGGATCATGGTCGTTCTGGTGAGACCTGCTGTCGTTTTGCATTGAGAACACGCCATTTTGCTATCGAGGACTGAAGTGCACCACCTTGTGACATGGTCCTGTGTCGGTGCTGCACACAACGGTAGTCTTGTGGTGACTCTATGGATCAAGTTGCACGTGTGTTCTGTTTTAGTCTTTTCTTTACTGTGACAGAATGATCACAAATTCACAATTCTGAATTTCTCAGAAGATGGCTTGGAATTAGTAATGAGCGTGTCATGTTTTGGTTGTAAAACAGTATCATACGTATATACGAAAATGCATATAAGTTTTGTTCTAAAAGAAATTCCAAAAAATTAATAATGTCAGAAATTGGTCTATGTTTCTTATAATTAGAACAAAAAGAAAAACATAACTGTTTCTTATAAAAAGAACCATGTTACTTGATGCTAGGATTTTTTCAAGTGGTTTTGGAAACTGTTTTTCTTTTCAGCACTTAGGATGACTTAAAGAATTTTAATCTGACATATTGCTGAAAGACATTGCAAACTGTCTGAAGTTCGGATGTAAATTAACATTACTTAGAGGTAGCGATTGGCAAACTGAGATTGATTTCTTGAAGTAACTAGAGTTTTTTAATCTTAAAATTGAAGGTTACTAAGCAGTTGTTCAGCGAGTACTTGTGCAGTGTTGCTAGTTGTTATCTTTATGTAATGTCATAGAACTAAGAAGTGGCTGCTCAGACTTGGTCGAGCGATTAAATTACCCTAGTTCCTGGAAATTTGTTGTTTTTGCCACATTTCTGTTGTTTTTTATGTTCTATCCTATTTTAAAATGTAAACTTTGTTTATGCTTTAACGGCTTCTGTTGCTTTTTGCATTTTATTAAAGGCACCACCACCTGCTTATCCATATCCGGATCCCTACTACAGAAGCATCTTTGCTCCCTATGATGCACAACCTTATCCGCCGCAACCCTACGGTGGACATCCAATGGTTCGTTCTAATTTCTTGCTGTTGATTTTTTGTAATTCGGTGGTTTCTTATCAAAGCTATTTTCTTATCTTTATATGATTGAACCATATTCTGTGCCAGGCCAATCTTCAGTTAATGGGAATTCAGCATGCAGGAGTTCCTTTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAGTATCATGGTATTTTAAGACGCAGGCAGTCTCGTGCTAAAGCTGAATCAGAAAAGAAAGTTACACGGAATCGGAAGGTATGCCATTATCCCCTTTTCTCTTGTGGCTTCTTTCTATGGCAAAGTTGATTGAGATTTATTTATTTTTTAATAAAAAATGTATAATGGGGAGAAGTTTTCTGGAGGTTGCGTTTTAGAAAAAGATCTGTGACCTTGATCTGGGTCTTGATATCTAGGTTTTTTATGTTTACACGACCGCAATGTGACTGCATTTGACCGTGCTTTTTCTCCATATAAAGGATGACAAGCATTATCACGCTATTATTCAAAGCAAATGTTTTAAAAACCAGACCAAGCCGGGATCGGTCAGTTTGGTGGTTGGTCTGATCCCGGTTATATCGCAGTCTGGTTGAACTGGGTTAGACCACAGCCCAATTTTCAAATTTTAAATGTTATTTAGTACTTTTAACATTTCATTTATTTATTTGTCGTCTGGTTCAACTACAGTTGAACCAATTAAACCATGACCTGAAGGTCTCACCAGTTTGATCTCTGGTCCGGTTTTCAAAACACCGATTTAAAGCCTACTTAAGTTATATTATGGGCTTGCTTCTTGATGTTTTTGTGATTCCCCGTCAATTTATTTGACTCACATGATTCCATGCATCATCTATGAATGTACTTGATCTTTAAACAAATATTTCAGCCATACTTGCATGAATCACGGCATTTGCACGCTCTGAAAAGAGCAAGAGGATGTGGAGGTCGGTTTCTGAATTCAAAGAAAGATGAGAATCAACAAGATGAGGTTGGATCAGCTGACAATTCACATTCCAATATCAATCTCAATTCTGATAGAAATGATCTTGCACAATCTGATAAAAATCCTTGA
Protein sequence

>MS.gene03072.t1

MTSSTHDPTDNEADGQQQSESQMQPISANGISHAGVDNAQVVQYAAPPQLGTGHAMAPPPAYPYPDPYYRSIFAPYDAQPYPPQPYGGHPMANLQLMGIQHAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESEKKVTRNRKPYLHESRHLHALKRARGCGGRFLNSKKDENQQDEVGSADNSHSNINLNSDRNDLAQSDKNP