Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74545.t1 | XP_003594522.1 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 4.20E-90 | 340.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74545.t1 | Q84JP1 | 52.5 | 177 | 67 | 5 | 1 | 175 | 1 | 162 | 1.5e-35 | 151.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74545.t1 | G7IKU2 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 3.0e-90 | 340.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene74545.t1 | TF | NF-YA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03072 | MS.gene74545 | PPI |
| MS.gene003298 | MS.gene74545 | PPI |
| MS.gene02097 | MS.gene74545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74545.t1 | MTR_2g030170 | 98.551 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 3.25e-153 | 423 |
| MS.gene74545.t1 | MTR_2g030170 | 85.000 | 240 | 3 | 1 | 1 | 207 | 1 | 240 | 1.38e-146 | 407 |
| MS.gene74545.t1 | MTR_3g061510 | 51.429 | 140 | 52 | 4 | 48 | 184 | 116 | 242 | 1.12e-36 | 130 |
| MS.gene74545.t1 | MTR_3g061510 | 51.429 | 140 | 52 | 4 | 48 | 184 | 136 | 262 | 1.61e-36 | 130 |
| MS.gene74545.t1 | MTR_8g037270 | 62.162 | 111 | 38 | 1 | 86 | 192 | 127 | 237 | 3.24e-36 | 128 |
| MS.gene74545.t1 | MTR_8g019540 | 52.381 | 126 | 49 | 3 | 49 | 173 | 110 | 225 | 2.67e-35 | 127 |
| MS.gene74545.t1 | MTR_2g099490 | 43.210 | 162 | 82 | 4 | 47 | 199 | 118 | 278 | 2.77e-35 | 127 |
| MS.gene74545.t1 | MTR_2g099490 | 43.312 | 157 | 73 | 4 | 47 | 199 | 118 | 262 | 8.87e-34 | 123 |
| MS.gene74545.t1 | MTR_2g041090 | 44.444 | 144 | 71 | 3 | 62 | 204 | 32 | 167 | 5.73e-32 | 116 |
| MS.gene74545.t1 | MTR_7g106450 | 42.138 | 159 | 69 | 5 | 49 | 204 | 122 | 260 | 9.85e-30 | 112 |
| MS.gene74545.t1 | MTR_1g056530 | 43.537 | 147 | 59 | 6 | 44 | 186 | 111 | 237 | 2.99e-29 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74545.t1 | AT1G30500 | 54.146 | 205 | 73 | 7 | 1 | 203 | 1 | 186 | 3.79e-65 | 199 |
| MS.gene74545.t1 | AT1G30500 | 53.171 | 205 | 71 | 7 | 1 | 203 | 1 | 182 | 6.08e-63 | 194 |
| MS.gene74545.t1 | AT2G34720 | 50.000 | 212 | 83 | 8 | 1 | 206 | 1 | 195 | 3.67e-58 | 182 |
| MS.gene74545.t1 | AT2G34720 | 59.060 | 149 | 51 | 4 | 62 | 206 | 18 | 160 | 7.14e-54 | 170 |
| MS.gene74545.t1 | AT2G34720 | 59.060 | 149 | 51 | 4 | 62 | 206 | 18 | 160 | 7.14e-54 | 170 |
| MS.gene74545.t1 | AT3G20910 | 45.625 | 160 | 73 | 3 | 48 | 204 | 112 | 260 | 2.06e-37 | 132 |
| MS.gene74545.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene74545.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene74545.t1 | AT5G12840 | 46.108 | 167 | 72 | 4 | 47 | 207 | 118 | 272 | 7.04e-37 | 130 |
| MS.gene74545.t1 | AT5G12840 | 45.509 | 167 | 73 | 4 | 47 | 207 | 117 | 271 | 7.73e-37 | 129 |
| MS.gene74545.t1 | AT5G12840 | 45.509 | 167 | 73 | 4 | 47 | 207 | 117 | 271 | 7.73e-37 | 129 |
| MS.gene74545.t1 | AT1G72830 | 47.552 | 143 | 56 | 4 | 61 | 192 | 134 | 268 | 3.42e-34 | 124 |
| MS.gene74545.t1 | AT1G54160 | 57.843 | 102 | 40 | 2 | 86 | 184 | 148 | 249 | 7.94e-33 | 120 |
| MS.gene74545.t1 | AT1G72830 | 47.222 | 144 | 56 | 5 | 61 | 192 | 134 | 269 | 2.10e-32 | 119 |
| MS.gene74545.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene74545.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene74545.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene74545.t1 | AT1G17590 | 50.000 | 120 | 46 | 3 | 61 | 179 | 132 | 238 | 9.46e-31 | 115 |
| MS.gene74545.t1 | AT3G14020 | 54.808 | 104 | 42 | 2 | 73 | 175 | 134 | 233 | 3.33e-29 | 110 |
| MS.gene74545.t1 | AT3G14020 | 54.808 | 104 | 42 | 2 | 73 | 175 | 134 | 233 | 3.33e-29 | 110 |
| MS.gene74545.t1 | AT5G06510 | 40.559 | 143 | 61 | 5 | 76 | 203 | 2 | 135 | 9.54e-25 | 95.9 |
| MS.gene74545.t1 | AT5G06510 | 40.559 | 143 | 61 | 5 | 76 | 203 | 2 | 135 | 9.54e-25 | 95.9 |
| MS.gene74545.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene74545.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene74545.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene74545.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 124 | 230 | 2.54e-24 | 97.1 |
| MS.gene74545.t1 | AT5G06510 | 46.364 | 110 | 46 | 3 | 104 | 203 | 75 | 181 | 2.65e-24 | 95.9 |
| MS.gene74545.t1 | AT3G05690 | 42.609 | 115 | 42 | 2 | 62 | 172 | 105 | 199 | 3.47e-23 | 94.7 |
| MS.gene74545.t1 | AT3G05690 | 42.609 | 115 | 42 | 2 | 62 | 172 | 142 | 236 | 7.90e-23 | 94.4 |
| MS.gene74545.t1 | AT1G72830 | 54.878 | 82 | 27 | 1 | 121 | 192 | 162 | 243 | 3.00e-22 | 92.4 |
Find 55 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAATTGAGATTGATAT+TGG | 0.249770 | 2.3:-59614869 | None:intergenic |
| CCAGGCCAATCTTCAGTTAA+TGG | 0.300525 | 2.3:+59613945 | MS.gene74545:intron |
| CGGATAAGGTTGTGCATCAT+AGG | 0.313332 | 2.3:-59613800 | None:intergenic |
| CTGTAGTAGGGATCCGGATA+TGG | 0.349828 | 2.3:-59613763 | None:intergenic |
| CCGTAGGGTTGCGGCGGATA+AGG | 0.368018 | 2.3:-59613814 | None:intergenic |
| GAAATTCCGTTTGCAGATAT+AGG | 0.399724 | 2.3:-59611264 | None:intergenic |
| AATTCCCATTAACTGAAGAT+TGG | 0.417171 | 2.3:-59613950 | None:intergenic |
| CTTTCTTTGAATTCAGAAAC+CGG | 0.421740 | 2.3:-59614801 | None:intergenic |
| AGCAAAGATGCTTCTGTAGT+AGG | 0.425029 | 2.3:-59613776 | None:intergenic |
| CAGGCCAATCTTCAGTTAAT+GGG | 0.435926 | 2.3:+59613946 | MS.gene74545:intron |
| TGTCGTGATTCATGCAAGTA+TGG | 0.440305 | 2.3:-59614742 | None:intergenic |
| AAAAGAAAGTTACACGGAAT+CGG | 0.459956 | 2.3:+59614088 | MS.gene74545:CDS |
| GCACCTCCACAGCTTGGCAC+GGG | 0.466695 | 2.3:+59611327 | MS.gene74545:CDS |
| ACCACCTGCTTATCCATATC+CGG | 0.479165 | 2.3:+59613750 | MS.gene74545:CDS |
| CTGAAAAGAGCAAGAGGATG+TGG | 0.485801 | 2.3:+59614775 | MS.gene74545:CDS |
| CGCCGGTATTGATAATGCTC+AGG | 0.487682 | 2.3:+59611290 | MS.gene74545:CDS |
| GCAAAGATGCTTCTGTAGTA+GGG | 0.499527 | 2.3:-59613775 | None:intergenic |
| GTCAATGCAAAACAGTATCA+TGG | 0.506073 | 2.3:+59614024 | MS.gene74545:CDS |
| ATGCTTCTGTAGTAGGGATC+CGG | 0.507422 | 2.3:-59613769 | None:intergenic |
| GGATAAGGTTGTGCATCATA+GGG | 0.522061 | 2.3:-59613799 | None:intergenic |
| GCTTGGCACGGGGCATGCTA+TGG | 0.522353 | 2.3:+59611338 | MS.gene74545:CDS |
| GGATGTCCACCGTAGGGTTG+CGG | 0.523458 | 2.3:-59613823 | None:intergenic |
| AGCACCTCCACAGCTTGGCA+CGG | 0.523882 | 2.3:+59611326 | MS.gene74545:CDS |
| TTTGCCAACTGATGCAGTTG+AGG | 0.525775 | 2.3:+59613990 | MS.gene74545:CDS |
| GCATGCCCCGTGCCAAGCTG+TGG | 0.532400 | 2.3:-59611333 | None:intergenic |
| GAGCAAGAGGATGTGGAGGC+CGG | 0.538187 | 2.3:+59614782 | MS.gene74545:CDS |
| GAGAATCAACAAGATGAGGT+TGG | 0.539095 | 2.3:+59614826 | MS.gene74545:CDS |
| CCTTATCCGCCGCAACCCTA+CGG | 0.540441 | 2.3:+59613814 | MS.gene74545:CDS |
| TGCCCCGTGCCAAGCTGTGG+AGG | 0.541599 | 2.3:-59611330 | None:intergenic |
| GGATCCGGATATGGATAAGC+AGG | 0.543946 | 2.3:-59613754 | None:intergenic |
| GGCTCCTCAACTGCATCAGT+TGG | 0.545637 | 2.3:-59613994 | None:intergenic |
| AACCTGAGCATTATCAATAC+CGG | 0.557780 | 2.3:-59611292 | None:intergenic |
| ACCCTACGGTGGACATCCAA+TGG | 0.560327 | 2.3:+59613828 | MS.gene74545:CDS |
| ATGCAGCCTATATCTGCAAA+CGG | 0.566429 | 2.3:+59611258 | MS.gene74545:CDS |
| CACCTCCACAGCTTGGCACG+GGG | 0.573071 | 2.3:+59611328 | MS.gene74545:CDS |
| TGTCCAGATAACGAGGCTGA+TGG | 0.582397 | 2.3:+59611213 | MS.gene74545:intron |
| ACCATTGGATGTCCACCGTA+GGG | 0.583635 | 2.3:-59613829 | None:intergenic |
| CACGCTCTGAAAAGAGCAAG+AGG | 0.590582 | 2.3:+59614769 | MS.gene74545:CDS |
| TATGCAGCACCTCCACAGCT+TGG | 0.593812 | 2.3:+59611321 | MS.gene74545:CDS |
| AGATGAGAATCAACAAGATG+AGG | 0.599218 | 2.3:+59614822 | MS.gene74545:CDS |
| TCAACTGCATCAGTTGGCAA+AGG | 0.603408 | 2.3:-59613988 | None:intergenic |
| GGATATGGATAAGCAGGTGG+TGG | 0.616937 | 2.3:-59613748 | None:intergenic |
| GAAAGTTACACGGAATCGGA+AGG | 0.621098 | 2.3:+59614092 | MS.gene74545:CDS |
| TATCCGCCGCAACCCTACGG+TGG | 0.624811 | 2.3:+59613817 | MS.gene74545:CDS |
| TTAATGGGAATTCAGCATGC+AGG | 0.625390 | 2.3:+59613961 | MS.gene74545:CDS |
| ATCATGTGTGGAAGAAGTCA+TGG | 0.636060 | 2.3:-59610514 | None:intergenic |
| TCTTCCACACATGATCCCAC+AGG | 0.647344 | 2.3:+59610522 | MS.gene74545:CDS |
| TGTCCACCGTAGGGTTGCGG+CGG | 0.648752 | 2.3:-59613820 | None:intergenic |
| AACCATTGGATGTCCACCGT+AGG | 0.650023 | 2.3:-59613830 | None:intergenic |
| AAAAGAGCAAGAGGATGTGG+AGG | 0.656650 | 2.3:+59614778 | MS.gene74545:CDS |
| AATACCTGTGGGATCATGTG+TGG | 0.669627 | 2.3:-59610526 | None:intergenic |
| TCCGGATATGGATAAGCAGG+TGG | 0.669883 | 2.3:-59613751 | None:intergenic |
| AAATTGTTGTCCAGATAACG+AGG | 0.691918 | 2.3:+59611206 | MS.gene74545:intron |
| AATCAGAAAAGAAAGTTACA+CGG | 0.697568 | 2.3:+59614082 | MS.gene74545:CDS |
| GCAAACGGAATTTCTCACGC+CGG | 0.724226 | 2.3:+59611273 | MS.gene74545:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTAATAACATAATAA+TGG | - | chr2.3:59611055-59611074 | None:intergenic | 10.0% |
| !! | TTAATAAAAAATGTATAATG+GGG | + | chr2.3:59614183-59614202 | MS.gene74545:intron | 10.0% |
| !!! | AACATTTAAAATTTGAAAAT+TGG | - | chr2.3:59614470-59614489 | None:intergenic | 10.0% |
| !!! | ACATTTAAAATTTGAAAATT+GGG | - | chr2.3:59614469-59614488 | None:intergenic | 10.0% |
| !!! | TAAATGTATTAAATTTGTTA+AGG | - | chr2.3:59612196-59612215 | None:intergenic | 10.0% |
| !!! | TTTTTTAATCTTAAAATTGA+AGG | + | chr2.3:59613486-59613505 | MS.gene74545:intron | 10.0% |
| !! | AAATTAATAATGTCAGAAAT+TGG | + | chr2.3:59613208-59613227 | MS.gene74545:intron | 15.0% |
| !! | CTAACTCATTTAAAAATTAA+AGG | - | chr2.3:59611640-59611659 | None:intergenic | 15.0% |
| !! | TATCAGTACTTAAATATATT+AGG | - | chr2.3:59610695-59610714 | None:intergenic | 15.0% |
| !! | TTGATAAAACAAAATCATTT+AGG | + | chr2.3:59610592-59610611 | MS.gene74545:intron | 15.0% |
| !!! | CAAAGTTTACATTTTAAAAT+AGG | - | chr2.3:59613681-59613700 | None:intergenic | 15.0% |
| !!! | TATTTTAACTTTTTGGTTTT+GGG | + | chr2.3:59611812-59611831 | MS.gene74545:intron | 15.0% |
| !!! | TTATTTTAACTTTTTGGTTT+TGG | + | chr2.3:59611811-59611830 | MS.gene74545:intron | 15.0% |
| !!! | TTTCTGACATTATTAATTTT+TGG | - | chr2.3:59613207-59613226 | None:intergenic | 15.0% |
| !! | AATTACTTCACAAATTCTTT+AGG | + | chr2.3:59611472-59611491 | MS.gene74545:intron | 20.0% |
| !! | ATGCAAACTGAAAATAAAAA+AGG | - | chr2.3:59612675-59612694 | None:intergenic | 20.0% |
| !! | TGATAGAATTATTGTAAACA+GGG | + | chr2.3:59610710-59610729 | MS.gene74545:intron | 20.0% |
| !! | TGTAAATTAACATTACTTAG+AGG | + | chr2.3:59613420-59613439 | MS.gene74545:intron | 20.0% |
| !!! | AAACTTTGTTTATGCTTTAA+CGG | + | chr2.3:59613693-59613712 | MS.gene74545:intron | 20.0% |
| !!! | AATGAATTTCATTTTCTGAA+AGG | - | chr2.3:59612706-59612725 | None:intergenic | 20.0% |
| !!! | AGACAATTTTAGTTTTTTGA+AGG | + | chr2.3:59611933-59611952 | MS.gene74545:intron | 20.0% |
| !!! | TGCTTTTTGCATTTTATTAA+AGG | + | chr2.3:59613723-59613742 | MS.gene74545:intron | 20.0% |
| !!! | TTATCATTTTTCAATTGCTA+GGG | - | chr2.3:59612730-59612749 | None:intergenic | 20.0% |
| !!! | TTGTTTCTTATAAAAAGAAC+CGG | - | chr2.3:59613289-59613270 | None:intergenic | 20.0% |
| ! | AAAGAACTCAAAAATGTATC+AGG | - | chr2.3:59611907-59611926 | None:intergenic | 25.0% |
| ! | AATCAGAAAAGAAAGTTACA+CGG | + | chr2.3:59614082-59614101 | MS.gene74545:CDS | 25.0% |
| ! | AGAATTACTTCTTCAAATCA+TGG | + | chr2.3:59610640-59610659 | MS.gene74545:intron | 25.0% |
| ! | AGATCAAATCATCAAAATCA+AGG | + | chr2.3:59612259-59612278 | MS.gene74545:intron | 25.0% |
| ! | AGCCTACTTAAGTTATATTA+TGG | + | chr2.3:59614617-59614636 | MS.gene74545:intron | 25.0% |
| ! | ATCAGAATTGAGATTGATAT+TGG | - | chr2.3:59614872-59614891 | None:intergenic | 25.0% |
| ! | ATCTTTAAACAACATTCTCT+AGG | + | chr2.3:59611020-59611039 | MS.gene74545:intron | 25.0% |
| ! | ATGTGAGTCAAATAAATTGA+CGG | - | chr2.3:59614671-59614690 | None:intergenic | 25.0% |
| ! | ATTTGAAGAAGTAATTCTTC+TGG | - | chr2.3:59610638-59610657 | None:intergenic | 25.0% |
| ! | CATAAAAAACAACAGAAATG+TGG | - | chr2.3:59613652-59613671 | None:intergenic | 25.0% |
| ! | CATTACATAAAGATAACAAC+TGG | - | chr2.3:59613551-59613570 | None:intergenic | 25.0% |
| ! | CTGATAGAATTATTGTAAAC+AGG | + | chr2.3:59610709-59610728 | MS.gene74545:intron | 25.0% |
| ! | GCCTACTTAAGTTATATTAT+GGG | + | chr2.3:59614618-59614637 | MS.gene74545:intron | 25.0% |
| ! | GTAAACTCCTAATACATTTA+GGG | + | chr2.3:59610760-59610779 | MS.gene74545:intron | 25.0% |
| ! | GTTATGTCATTGAAGAAAAT+TGG | + | chr2.3:59611574-59611593 | MS.gene74545:intron | 25.0% |
| ! | TATTTACAGGAAAATCTCTT+AGG | + | chr2.3:59610545-59610564 | MS.gene74545:intron | 25.0% |
| ! | TGTAAACTCCTAATACATTT+AGG | + | chr2.3:59610759-59610778 | MS.gene74545:intron | 25.0% |
| ! | TTGTTATGAAATCAAAATGG+AGG | + | chr2.3:59612343-59612362 | MS.gene74545:intron | 25.0% |
| !! | ATTACATTTTGCACGTTTTT+GGG | - | chr2.3:59611158-59611177 | None:intergenic | 25.0% |
| !! | TATTACATTTTGCACGTTTT+TGG | - | chr2.3:59611159-59611178 | None:intergenic | 25.0% |
| !! | TATTTTCAGTTTGCATTTGT+CGG | + | chr2.3:59612679-59612698 | MS.gene74545:intron | 25.0% |
| !! | TTTGTTTGATAACTAACTTC+AGG | - | chr2.3:59611189-59611208 | None:intergenic | 25.0% |
| !! | TTTTTAAATGAGTTAGCTGT+TGG | + | chr2.3:59611644-59611663 | MS.gene74545:intron | 25.0% |
| !!! | AACTTAAGTAGGCTTTAAAT+CGG | - | chr2.3:59614611-59614630 | None:intergenic | 25.0% |
| !!! | CAAATTCTTTAGGATGTTTT+TGG | + | chr2.3:59611482-59611501 | MS.gene74545:intron | 25.0% |
| !!! | CTTATCATTTTTCAATTGCT+AGG | - | chr2.3:59612731-59612750 | None:intergenic | 25.0% |
| !!! | GCTGTTGATTTTTTGTAATA+CGG | + | chr2.3:59613867-59613886 | MS.gene74545:intron | 25.0% |
| AAAAGAAAGTTACACGGAAT+CGG | + | chr2.3:59614088-59614107 | MS.gene74545:CDS | 30.0% | |
| AAAATTTGAAAATTGGGCTG+TGG | - | chr2.3:59614463-59614482 | None:intergenic | 30.0% | |
| AAGAAATTAGAACGAACCAT+TGG | - | chr2.3:59613847-59613866 | None:intergenic | 30.0% | |
| AAGGAAAAAAACTCACATGT+TGG | + | chr2.3:59611952-59611971 | MS.gene74545:intron | 30.0% | |
| AATAAGCAGAAAACAGCTAA+TGG | - | chr2.3:59610865-59610884 | None:intergenic | 30.0% | |
| AATGCTTGTCATCCTTTATA+TGG | - | chr2.3:59614328-59614347 | None:intergenic | 30.0% | |
| AATGTCATAGAACTAAGAAG+TGG | + | chr2.3:59613567-59613586 | MS.gene74545:intron | 30.0% | |
| AATTCCCATTAACTGAAGAT+TGG | - | chr2.3:59613953-59613972 | None:intergenic | 30.0% | |
| ACATAAAACTTCAGATAGCA+TGG | - | chr2.3:59611094-59611113 | None:intergenic | 30.0% | |
| AGCCTAAAAGTTAACTATTG+AGG | + | chr2.3:59612053-59612072 | MS.gene74545:intron | 30.0% | |
| AGGAAAAAAACTCACATGTT+GGG | + | chr2.3:59611953-59611972 | MS.gene74545:intron | 30.0% | |
| ATTCTGAATTTCTCAGAAGA+TGG | + | chr2.3:59613087-59613106 | MS.gene74545:intron | 30.0% | |
| CCTAAAAGTTAACTATTGAG+GGG | + | chr2.3:59612055-59612074 | MS.gene74545:intron | 30.0% | |
| CTAAAAGTTAACTATTGAGG+GGG | + | chr2.3:59612056-59612075 | MS.gene74545:intron | 30.0% | |
| CTTTCTTTGAATTCAGAAAC+CGG | - | chr2.3:59614804-59614823 | None:intergenic | 30.0% | |
| GCCCATAATATAACTTAAGT+AGG | - | chr2.3:59614622-59614641 | None:intergenic | 30.0% | |
| GCCTAAAAGTTAACTATTGA+GGG | + | chr2.3:59612054-59612073 | MS.gene74545:intron | 30.0% | |
| GCGTTGTTATGAAATCAAAA+TGG | + | chr2.3:59612340-59612359 | MS.gene74545:intron | 30.0% | |
| GCTTCCTAATACCATAAAAA+AGG | + | chr2.3:59612553-59612572 | MS.gene74545:intron | 30.0% | |
| TATGCAATTACACGTGTTAT+TGG | + | chr2.3:59612318-59612337 | MS.gene74545:intron | 30.0% | |
| TCTTAATCAATTACTACCTC+CGG | + | chr2.3:59612216-59612235 | MS.gene74545:intron | 30.0% | |
| TGATAACAATCTAAGAACCT+GGG | + | chr2.3:59611684-59611703 | MS.gene74545:intron | 30.0% | |
| TGTGAGTCAAATAAATTGAC+GGG | - | chr2.3:59614670-59614689 | None:intergenic | 30.0% | |
| TTTCTTATAAAAAGAACCGG+AGG | - | chr2.3:59612235-59612254 | None:intergenic | 30.0% | |
| ! | ATTTTCAGTTTGCATTTGTC+GGG | + | chr2.3:59612680-59612699 | MS.gene74545:intron | 30.0% |
| ! | ATTTTCCTGTAAATACCTGT+GGG | - | chr2.3:59610540-59610559 | None:intergenic | 30.0% |
| ! | TGTTTTTCTTTTCAGCACTT+AGG | + | chr2.3:59613333-59613352 | MS.gene74545:intron | 30.0% |
| ! | TTAACTTTTAGGCTTTGCTT+GGG | - | chr2.3:59612047-59612066 | None:intergenic | 30.0% |
| ! | TTACATTTTGCACGTTTTTG+GGG | - | chr2.3:59611157-59611176 | None:intergenic | 30.0% |
| !! | ATTAAATTTGTTAAGGCGCA+TGG | - | chr2.3:59612189-59612208 | None:intergenic | 30.0% |
| !! | TTAAATTTGTTAAGGCGCAT+GGG | - | chr2.3:59612188-59612207 | None:intergenic | 30.0% |
| !! | TTTTGAGAGCTTATGAAAAC+CGG | + | chr2.3:59610828-59610847 | MS.gene74545:intron | 30.0% |
| !!! | AAGTTTTTTGAAGGTTTTGG+AGG | - | chr2.3:59611882-59611901 | None:intergenic | 30.0% |
| !!! | AGGATTTTTTCAAGTGGTTT+TGG | + | chr2.3:59613306-59613325 | MS.gene74545:intron | 30.0% |
| !!! | AGTTTTTTGAAGGTTTTGGA+GGG | - | chr2.3:59611881-59611900 | None:intergenic | 30.0% |
| !!! | CTCTCCTTTTTTATGGTATT+AGG | - | chr2.3:59612560-59612579 | None:intergenic | 30.0% |
| !!! | GAGAAGTTTTTTGAAGGTTT+TGG | - | chr2.3:59611885-59611904 | None:intergenic | 30.0% |
| !!! | GGCATTTTTATTTTCTGATG+TGG | + | chr2.3:59610566-59610585 | MS.gene74545:intron | 30.0% |
| !!! | GTTGATTTTTTGTAATACGG+TGG | + | chr2.3:59613870-59613889 | MS.gene74545:intron | 30.0% |
| !!! | TAAATCGGTGTTTTGAAAAC+CGG | - | chr2.3:59614596-59614615 | None:intergenic | 30.0% |
| !!! | TACTCTTCTCTCCTTTTTTA+TGG | - | chr2.3:59612567-59612586 | None:intergenic | 30.0% |
| !!! | TATCAGGAGAAGTTTTTTGA+AGG | - | chr2.3:59611891-59611910 | None:intergenic | 30.0% |
| !!! | TGTGCTTTTTCTCCATATAA+AGG | + | chr2.3:59614313-59614332 | MS.gene74545:intron | 30.0% |
| AAACAGGCCCTAAATGTATT+AGG | - | chr2.3:59610770-59610789 | None:intergenic | 35.0% | |
| AAAGAAGCCACAAGAGAAAA+GGG | - | chr2.3:59614130-59614149 | None:intergenic | 35.0% | |
| AAATTGTTGTCCAGATAACG+AGG | + | chr2.3:59611206-59611225 | MS.gene74545:intron | 35.0% | |
| AACATGTTCATGTTGGATCA+TGG | + | chr2.3:59612864-59612883 | MS.gene74545:intron | 35.0% | |
| AACCTGAGCATTATCAATAC+CGG | - | chr2.3:59611295-59611314 | None:intergenic | 35.0% | |
| AATCCTAGCATCAAGTAACA+TGG | - | chr2.3:59613292-59613311 | None:intergenic | 35.0% | |
| ACAACAAATTTCCAGGAACT+AGG | - | chr2.3:59613624-59613643 | None:intergenic | 35.0% | |
| ACTTCAGGAGAAATGAAGAA+GGG | - | chr2.3:59612004-59612023 | None:intergenic | 35.0% | |
| AGATGAGAATCAACAAGATG+AGG | + | chr2.3:59614822-59614841 | MS.gene74545:CDS | 35.0% | |
| AGTAGAGACTTGGGTATTAT+GGG | - | chr2.3:59612146-59612165 | None:intergenic | 35.0% | |
| CAACAAATTTCCAGGAACTA+GGG | - | chr2.3:59613623-59613642 | None:intergenic | 35.0% | |
| CTTCTTCAAATCATGGTTGT+CGG | + | chr2.3:59610647-59610666 | MS.gene74545:intron | 35.0% | |
| GAAAAAAACTCACATGTTGG+GGG | + | chr2.3:59611955-59611974 | MS.gene74545:intron | 35.0% | |
| GAAAAATGATAAGCCGTTTG+AGG | + | chr2.3:59612738-59612757 | MS.gene74545:intron | 35.0% | |
| GAAATTCCGTTTGCAGATAT+AGG | - | chr2.3:59611267-59611286 | None:intergenic | 35.0% | |
| GATAACAATCTAAGAACCTG+GGG | + | chr2.3:59611685-59611704 | MS.gene74545:intron | 35.0% | |
| GATTAAATTACCCTAGTTCC+TGG | + | chr2.3:59613610-59613629 | MS.gene74545:intron | 35.0% | |
| GGAAAAAAACTCACATGTTG+GGG | + | chr2.3:59611954-59611973 | MS.gene74545:intron | 35.0% | |
| GGAAGAACCAAACAACTTAA+TGG | + | chr2.3:59612077-59612096 | MS.gene74545:intron | 35.0% | |
| GGCAAAAACAACAAATTTCC+AGG | - | chr2.3:59613631-59613650 | None:intergenic | 35.0% | |
| GTACATTCATAGATGATGCA+TGG | - | chr2.3:59614698-59614717 | None:intergenic | 35.0% | |
| GTATAGAACCATTCCTCAAA+CGG | - | chr2.3:59612754-59612773 | None:intergenic | 35.0% | |
| GTCAATGCAAAACAGTATCA+TGG | + | chr2.3:59614024-59614043 | MS.gene74545:CDS | 35.0% | |
| GTGAGTCAAATAAATTGACG+GGG | - | chr2.3:59614669-59614688 | None:intergenic | 35.0% | |
| GTGATAACAATCTAAGAACC+TGG | + | chr2.3:59611683-59611702 | MS.gene74545:intron | 35.0% | |
| TAGTAGAGACTTGGGTATTA+TGG | - | chr2.3:59612147-59612166 | None:intergenic | 35.0% | |
| TCAAACAAGTCAATCCAAAC+AGG | - | chr2.3:59610786-59610805 | None:intergenic | 35.0% | |
| TCAAAGCAAAAGCAGGAATT+TGG | - | chr2.3:59612509-59612528 | None:intergenic | 35.0% | |
| ! | AATCAAGGAAGTGCACTTAA+AGG | + | chr2.3:59612274-59612293 | MS.gene74545:intron | 35.0% |
| ! | ATTGCAAACTGTCTGAAGTT+CGG | + | chr2.3:59613396-59613415 | MS.gene74545:intron | 35.0% |
| ! | CCCCTCAATAGTTAACTTTT+AGG | - | chr2.3:59612058-59612077 | None:intergenic | 35.0% |
| ! | GATTTTCCTGTAAATACCTG+TGG | - | chr2.3:59610541-59610560 | None:intergenic | 35.0% |
| ! | GTTAACTTTTAGGCTTTGCT+TGG | - | chr2.3:59612048-59612067 | None:intergenic | 35.0% |
| ! | TAATACATTTAGGGCCTGTT+TGG | + | chr2.3:59610769-59610788 | MS.gene74545:intron | 35.0% |
| !! | TATAATGGGGAGAAGTTTTC+TGG | + | chr2.3:59614196-59614215 | MS.gene74545:intron | 35.0% |
| !! | TGTTTTGCATTGACAAACAC+AGG | - | chr2.3:59614018-59614037 | None:intergenic | 35.0% |
| !! | TTTTAAAAACCAGACCAAGC+CGG | + | chr2.3:59614373-59614392 | MS.gene74545:intron | 35.0% |
| !!! | ATCATGGTATTTTAAGACGC+AGG | + | chr2.3:59614040-59614059 | MS.gene74545:CDS | 35.0% |
| !!! | GATGCTAGGATTTTTTCAAG+TGG | + | chr2.3:59613300-59613319 | MS.gene74545:intron | 35.0% |
| AAAGAACTTGGAGAATGGAG+AGG | + | chr2.3:59611754-59611773 | MS.gene74545:intron | 40.0% | |
| AAAGATCTGTGACCTTGATC+TGG | + | chr2.3:59614235-59614254 | MS.gene74545:intron | 40.0% | |
| AAGAAGCCACAAGAGAAAAG+GGG | - | chr2.3:59614129-59614148 | None:intergenic | 40.0% | |
| AAGATCTGTGACCTTGATCT+GGG | + | chr2.3:59614236-59614255 | MS.gene74545:intron | 40.0% | |
| AAGGGAAAGAACTTGGAGAA+TGG | + | chr2.3:59611749-59611768 | MS.gene74545:intron | 40.0% | |
| AATGAAGAAGGGAAGGAAAG+TGG | - | chr2.3:59611993-59612012 | None:intergenic | 40.0% | |
| ACTCCCAAACAAACCCTTAA+TGG | - | chr2.3:59611717-59611736 | None:intergenic | 40.0% | |
| AGATATCAAGACCCAGATCA+AGG | - | chr2.3:59614250-59614269 | None:intergenic | 40.0% | |
| AGCAAAGATGCTTCTGTAGT+AGG | - | chr2.3:59613779-59613798 | None:intergenic | 40.0% | |
| AGTCAAATGCAGTCACATTG+CGG | - | chr2.3:59614294-59614313 | None:intergenic | 40.0% | |
| ATGATAAGCCGTTTGAGGAA+TGG | + | chr2.3:59612743-59612762 | MS.gene74545:intron | 40.0% | |
| ATGATCCCACAGGTATTTAC+AGG | + | chr2.3:59610532-59610551 | MS.gene74545:intron | 40.0% | |
| ATGCAGCCTATATCTGCAAA+CGG | + | chr2.3:59611258-59611277 | MS.gene74545:CDS | 40.0% | |
| ATTGAACCATATTCTGTGCC+AGG | + | chr2.3:59613927-59613946 | MS.gene74545:intron | 40.0% | |
| CACAAGAGAAAAGGGGATAA+TGG | - | chr2.3:59614122-59614141 | None:intergenic | 40.0% | |
| CAGGCCAATCTTCAGTTAAT+GGG | + | chr2.3:59613946-59613965 | MS.gene74545:intron | 40.0% | |
| CATTACTTAGAGGTAGCGAT+TGG | + | chr2.3:59613430-59613449 | MS.gene74545:intron | 40.0% | |
| CCAATTAAACCATGACCTGA+AGG | + | chr2.3:59614548-59614567 | MS.gene74545:intron | 40.0% | |
| CCTTCAGGTCATGGTTTAAT+TGG | - | chr2.3:59614551-59614570 | None:intergenic | 40.0% | |
| CTTCACAGTAGTAGAGACTT+GGG | - | chr2.3:59612155-59612174 | None:intergenic | 40.0% | |
| GAAAGAAGCCACAAGAGAAA+AGG | - | chr2.3:59614131-59614150 | None:intergenic | 40.0% | |
| GAATTTCTCAGAAGATGGCT+TGG | + | chr2.3:59613092-59613111 | MS.gene74545:intron | 40.0% | |
| GACGTTGAAGGCAATCATAA+GGG | + | chr2.3:59612527-59612546 | MS.gene74545:intron | 40.0% | |
| GACTTCAGGAGAAATGAAGA+AGG | - | chr2.3:59612005-59612024 | None:intergenic | 40.0% | |
| GAGAATCAACAAGATGAGGT+TGG | + | chr2.3:59614826-59614845 | MS.gene74545:CDS | 40.0% | |
| GCAAAGATGCTTCTGTAGTA+GGG | - | chr2.3:59613778-59613797 | None:intergenic | 40.0% | |
| GGATAAGGTTGTGCATCATA+GGG | - | chr2.3:59613802-59613821 | None:intergenic | 40.0% | |
| GTAAGGCAACATGTTCATGT+TGG | + | chr2.3:59612857-59612876 | MS.gene74545:intron | 40.0% | |
| GTTCTGCATTGCCAAAAAGT+AGG | + | chr2.3:59612786-59612805 | MS.gene74545:intron | 40.0% | |
| TCTCTTGTGGCTTCTTTCTA+TGG | + | chr2.3:59614133-59614152 | MS.gene74545:intron | 40.0% | |
| TGACGTTGAAGGCAATCATA+AGG | + | chr2.3:59612526-59612545 | MS.gene74545:intron | 40.0% | |
| TGATCTGGGTCTTGATATCT+AGG | + | chr2.3:59614250-59614269 | MS.gene74545:intron | 40.0% | |
| TGTCGTGATTCATGCAAGTA+TGG | - | chr2.3:59614745-59614764 | None:intergenic | 40.0% | |
| TTAATGGGAATTCAGCATGC+AGG | + | chr2.3:59613961-59613980 | MS.gene74545:CDS | 40.0% | |
| TTCAACGTCAAAGCAAAAGC+AGG | - | chr2.3:59612516-59612535 | None:intergenic | 40.0% | |
| TTCAGTCCTCGATAGCAAAA+TGG | - | chr2.3:59612932-59612951 | None:intergenic | 40.0% | |
| TTTAAAAACCAGACCAAGCC+GGG | + | chr2.3:59614374-59614393 | MS.gene74545:intron | 40.0% | |
| ! | CATTATCCCCTTTTCTCTTG+TGG | + | chr2.3:59614120-59614139 | MS.gene74545:intron | 40.0% |
| ! | CCTCCATTAAGGGTTTGTTT+GGG | + | chr2.3:59611711-59611730 | MS.gene74545:intron | 40.0% |
| ! | GAACCATGTTACTTGATGCT+AGG | + | chr2.3:59613286-59613305 | MS.gene74545:intron | 40.0% |
| ! | GCTAATGGACAAGTCATAAC+CGG | - | chr2.3:59610850-59610869 | None:intergenic | 40.0% |
| ! | GGTGAAGCCATTAAGTTGTT+TGG | - | chr2.3:59612087-59612106 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGGAGTTAGAA+GGG | + | chr2.3:59611722-59611741 | MS.gene74545:intron | 40.0% |
| ! | GTAATGAGCGTGTCATGTTT+TGG | + | chr2.3:59613120-59613139 | MS.gene74545:intron | 40.0% |
| ! | TCCTCCATTAAGGGTTTGTT+TGG | + | chr2.3:59611710-59611729 | MS.gene74545:intron | 40.0% |
| ! | TGCTTTTGCTTTGACGTTGA+AGG | + | chr2.3:59612515-59612534 | MS.gene74545:intron | 40.0% |
| !! | ATAGGACTAGTCAAAGGCAT+CGG | - | chr2.3:59611127-59611146 | None:intergenic | 40.0% |
| !! | CTTCACTTGTTTGCTATCCT+TGG | + | chr2.3:59611418-59611437 | MS.gene74545:intron | 40.0% |
| AAAAGAGCAAGAGGATGTGG+AGG | + | chr2.3:59614778-59614797 | MS.gene74545:CDS | 45.0% | |
| AAAAGCAGGAATTTGGCTGC+AGG | - | chr2.3:59612502-59612521 | None:intergenic | 45.0% | |
| AACCAGACTGCGATATAACC+GGG | - | chr2.3:59614427-59614446 | None:intergenic | 45.0% | |
| AACCGGACCAAAGATCAAAC+TGG | - | chr2.3:59614579-59614598 | None:intergenic | 45.0% | |
| AAGAAGGGAAGGAAAGTGGA+AGG | - | chr2.3:59611989-59612008 | None:intergenic | 45.0% | |
| AATACCTGTGGGATCATGTG+TGG | - | chr2.3:59610529-59610548 | None:intergenic | 45.0% | |
| ACCACCTGCTTATCCATATC+CGG | + | chr2.3:59613750-59613769 | MS.gene74545:CDS | 45.0% | |
| AGAAGGGAAGGAAAGTGGAA+GGG | - | chr2.3:59611988-59612007 | None:intergenic | 45.0% | |
| AGATTGGAGGGAACCAAGAT+GGG | - | chr2.3:59612610-59612629 | None:intergenic | 45.0% | |
| AGCTTTCACAGTGTTGCAGT+TGG | - | chr2.3:59612474-59612493 | None:intergenic | 45.0% | |
| AGTCTCTACTACTGTGAAGG+TGG | + | chr2.3:59612156-59612175 | MS.gene74545:intron | 45.0% | |
| ATATCGCAGTCTGGTTGAAC+TGG | + | chr2.3:59614431-59614450 | MS.gene74545:intron | 45.0% | |
| ATCAAACTGGTGAGACCTTC+AGG | - | chr2.3:59614566-59614585 | None:intergenic | 45.0% | |
| ATGCTTCTGTAGTAGGGATC+CGG | - | chr2.3:59613772-59613791 | None:intergenic | 45.0% | |
| ATGTTGGATCATGGTCGTTC+TGG | + | chr2.3:59612873-59612892 | MS.gene74545:intron | 45.0% | |
| CAACCAGACTGCGATATAAC+CGG | - | chr2.3:59614428-59614447 | None:intergenic | 45.0% | |
| CACCAGTTTGATCTTTGGTC+CGG | + | chr2.3:59614574-59614593 | MS.gene74545:intron | 45.0% | |
| CACTTCCAATAAGAGAGCCA+AGG | - | chr2.3:59611438-59611457 | None:intergenic | 45.0% | |
| CAGGAGAAATGAAGAAGGGA+AGG | - | chr2.3:59612000-59612019 | None:intergenic | 45.0% | |
| CATCTCATGCTTCTCGATGT+GGG | + | chr2.3:59612110-59612129 | MS.gene74545:intron | 45.0% | |
| CCAAGTCTCTACTACTGTGA+AGG | + | chr2.3:59612153-59612172 | MS.gene74545:intron | 45.0% | |
| CCAGGCCAATCTTCAGTTAA+TGG | + | chr2.3:59613945-59613964 | MS.gene74545:intron | 45.0% | |
| CCCAAACAAACCCTTAATGG+AGG | - | chr2.3:59611714-59611733 | None:intergenic | 45.0% | |
| CCTTCACAGTAGTAGAGACT+TGG | - | chr2.3:59612156-59612175 | None:intergenic | 45.0% | |
| CGGATAAGGTTGTGCATCAT+AGG | - | chr2.3:59613803-59613822 | None:intergenic | 45.0% | |
| CTGAAAAGAGCAAGAGGATG+TGG | + | chr2.3:59614775-59614794 | MS.gene74545:CDS | 45.0% | |
| CTGTGATAGCTACAACGAGA+CGG | - | chr2.3:59611534-59611553 | None:intergenic | 45.0% | |
| CTTGGGAGTAATGAGGGAAA+GGG | - | chr2.3:59612030-59612049 | None:intergenic | 45.0% | |
| GAAAGTTACACGGAATCGGA+AGG | + | chr2.3:59614092-59614111 | MS.gene74545:CDS | 45.0% | |
| GCAAACATGTTGTGAAGCTG+CGG | - | chr2.3:59612633-59612652 | None:intergenic | 45.0% | |
| GCTATCACAGATGCACATTG+TGG | + | chr2.3:59611544-59611563 | MS.gene74545:intron | 45.0% | |
| GCTTTCACAGTGTTGCAGTT+GGG | - | chr2.3:59612473-59612492 | None:intergenic | 45.0% | |
| GCTTTGCTTGGGAGTAATGA+GGG | - | chr2.3:59612036-59612055 | None:intergenic | 45.0% | |
| GGGAGAAAAGGGAAAGAACT+TGG | + | chr2.3:59611742-59611761 | MS.gene74545:intron | 45.0% | |
| GGGAGTTAGAAGGGAGAAAA+GGG | + | chr2.3:59611731-59611750 | MS.gene74545:intron | 45.0% | |
| GGTCTCACCAGTTTGATCTT+TGG | + | chr2.3:59614569-59614588 | MS.gene74545:intron | 45.0% | |
| GTCTCTACTACTGTGAAGGT+GGG | + | chr2.3:59612157-59612176 | MS.gene74545:intron | 45.0% | |
| TATCGCAGTCTGGTTGAACT+GGG | + | chr2.3:59614432-59614451 | MS.gene74545:intron | 45.0% | |
| TCAACTGCATCAGTTGGCAA+AGG | - | chr2.3:59613991-59614010 | None:intergenic | 45.0% | |
| TCTCAATGCAAAACGACAGC+AGG | - | chr2.3:59612904-59612923 | None:intergenic | 45.0% | |
| TGGGAGTTAGAAGGGAGAAA+AGG | + | chr2.3:59611730-59611749 | MS.gene74545:intron | 45.0% | |
| TGTTGCAGTTGGGAGATCAA+TGG | - | chr2.3:59612463-59612482 | None:intergenic | 45.0% | |
| TTTGCCAACTGATGCAGTTG+AGG | + | chr2.3:59613990-59614009 | MS.gene74545:CDS | 45.0% | |
| ! | AATGGGGAGAAGTTTTCTGG+AGG | + | chr2.3:59614199-59614218 | MS.gene74545:intron | 45.0% |
| ! | ATCGAGAAGCATGAGATGCT+CGG | - | chr2.3:59612108-59612127 | None:intergenic | 45.0% |
| ! | CCATTAACTGAAGATTGGCC+TGG | - | chr2.3:59613948-59613967 | None:intergenic | 45.0% |
| ! | CTTGGCTCTCTTATTGGAAG+TGG | + | chr2.3:59611436-59611455 | MS.gene74545:intron | 45.0% |
| ! | CTTTGACTAGTCCTATTCCC+TGG | + | chr2.3:59611131-59611150 | MS.gene74545:intron | 45.0% |
| ! | GCTATCCTTGGCTCTCTTAT+TGG | + | chr2.3:59611430-59611449 | MS.gene74545:intron | 45.0% |
| ! | GGGTTTGTTTGGGAGTTAGA+AGG | + | chr2.3:59611721-59611740 | MS.gene74545:intron | 45.0% |
| !! | AACACGCCATTTTGCTATCG+AGG | + | chr2.3:59612923-59612942 | MS.gene74545:intron | 45.0% |
| !! | CAGGGAATAGGACTAGTCAA+AGG | - | chr2.3:59611133-59611152 | None:intergenic | 45.0% |
| !! | GCGATTCTCTGCCTACTTTT+TGG | - | chr2.3:59612800-59612819 | None:intergenic | 45.0% |
| !! | GTAGTCTTGTGGTGACTCTA+TGG | + | chr2.3:59612998-59613017 | MS.gene74545:intron | 45.0% |
| !! | TTTAATAAAAAATGTATAAT+GGG | + | chr2.3:59614182-59614201 | MS.gene74545:intron | 5.0% |
| !!! | TTATTTTTATTTTAACTTTT+TGG | + | chr2.3:59611805-59611824 | MS.gene74545:intron | 5.0% |
| !!! | TTTTAATAAAAAATGTATAA+TGG | + | chr2.3:59614181-59614200 | MS.gene74545:intron | 5.0% |
| AACCATTGGATGTCCACCGT+AGG | - | chr2.3:59613833-59613852 | None:intergenic | 50.0% | |
| AAGAAGTGGCTGCTCAGACT+TGG | + | chr2.3:59613581-59613600 | MS.gene74545:intron | 50.0% | |
| AAGTGCACCACCTTGTGACA+TGG | + | chr2.3:59612950-59612969 | MS.gene74545:intron | 50.0% | |
| ACCATTGGATGTCCACCGTA+GGG | - | chr2.3:59613832-59613851 | None:intergenic | 50.0% | |
| ACCTGGGGAATCCTCCATTA+AGG | + | chr2.3:59611700-59611719 | MS.gene74545:intron | 50.0% | |
| ATCCCGGTTATATCGCAGTC+TGG | + | chr2.3:59614422-59614441 | MS.gene74545:intron | 50.0% | |
| CAAGATGGGAGGATGAGGAA+AGG | - | chr2.3:59612596-59612615 | None:intergenic | 50.0% | |
| CCTGGGGAATCCTCCATTAA+GGG | + | chr2.3:59611701-59611720 | MS.gene74545:intron | 50.0% | |
| CTGTAGTAGGGATCCGGATA+TGG | - | chr2.3:59613766-59613785 | None:intergenic | 50.0% | |
| CTTGGAGAATGGAGAGGAGA+CGG | + | chr2.3:59611760-59611779 | MS.gene74545:intron | 50.0% | |
| CTTGTGACATGGTCCTGTGT+CGG | + | chr2.3:59612961-59612980 | MS.gene74545:intron | 50.0% | |
| CTTTCCTCATCCTCCCATCT+TGG | + | chr2.3:59612594-59612613 | MS.gene74545:intron | 50.0% | |
| GAGATCAATGGATGGTGAGG+GGG | - | chr2.3:59612451-59612470 | None:intergenic | 50.0% | |
| GAGATTGGAGGGAACCAAGA+TGG | - | chr2.3:59612611-59612630 | None:intergenic | 50.0% | |
| GATAGCTACAACGAGACGGA+GGG | - | chr2.3:59611530-59611549 | None:intergenic | 50.0% | |
| GATGCGGTTGCAAGATGGTA+AGG | + | chr2.3:59612840-59612859 | MS.gene74545:intron | 50.0% | |
| GCAAACGGAATTTCTCACGC+CGG | + | chr2.3:59611273-59611292 | MS.gene74545:CDS | 50.0% | |
| GCAGTTGGGAGATCAATGGA+TGG | - | chr2.3:59612459-59612478 | None:intergenic | 50.0% | |
| GCATCTCATGCTTCTCGATG+TGG | + | chr2.3:59612109-59612128 | MS.gene74545:intron | 50.0% | |
| GCTTGGGAGTAATGAGGGAA+AGG | - | chr2.3:59612031-59612050 | None:intergenic | 50.0% | |
| GGAGATCAATGGATGGTGAG+GGG | - | chr2.3:59612452-59612471 | None:intergenic | 50.0% | |
| GGATATGGATAAGCAGGTGG+TGG | - | chr2.3:59613751-59613770 | None:intergenic | 50.0% | |
| GGATCCGGATATGGATAAGC+AGG | - | chr2.3:59613757-59613776 | None:intergenic | 50.0% | |
| GGCTTTGCTTGGGAGTAATG+AGG | - | chr2.3:59612037-59612056 | None:intergenic | 50.0% | |
| GGGAAGACAGCAGTGTTACA+CGG | - | chr2.3:59612409-59612428 | None:intergenic | 50.0% | |
| GGGAGATCAATGGATGGTGA+GGG | - | chr2.3:59612453-59612472 | None:intergenic | 50.0% | |
| TCCGGATATGGATAAGCAGG+TGG | - | chr2.3:59613754-59613773 | None:intergenic | 50.0% | |
| TCTTCCACACATGATCCCAC+AGG | + | chr2.3:59610522-59610541 | MS.gene74545:CDS | 50.0% | |
| TGAGGGAAAGGGAAGACTTC+AGG | - | chr2.3:59612019-59612038 | None:intergenic | 50.0% | |
| TGATAGCTACAACGAGACGG+AGG | - | chr2.3:59611531-59611550 | None:intergenic | 50.0% | |
| TGCTTCTCGATGTGGGACAT+AGG | + | chr2.3:59612117-59612136 | MS.gene74545:intron | 50.0% | |
| TGGGAGATCAATGGATGGTG+AGG | - | chr2.3:59612454-59612473 | None:intergenic | 50.0% | |
| TGTCCAGATAACGAGGCTGA+TGG | + | chr2.3:59611213-59611232 | MS.gene74545:intron | 50.0% | |
| TGTCCATCAGCCTCGTTATC+TGG | - | chr2.3:59611219-59611238 | None:intergenic | 50.0% | |
| TGTTGTGAAGCTGCGGAGAT+TGG | - | chr2.3:59612626-59612645 | None:intergenic | 50.0% | |
| ! | TGCACACAACGGTAGTCTTG+TGG | + | chr2.3:59612987-59613006 | MS.gene74545:intron | 50.0% |
| !! | CACGCTCTGAAAAGAGCAAG+AGG | + | chr2.3:59614769-59614788 | MS.gene74545:CDS | 50.0% |
| !! | CGCCGGTATTGATAATGCTC+AGG | + | chr2.3:59611290-59611309 | MS.gene74545:CDS | 50.0% |
| !! | GATTGGCCTGGCACAGAATA+TGG | - | chr2.3:59613936-59613955 | None:intergenic | 50.0% |
| !! | TTTGGTGGTTGGTCTGATCC+CGG | + | chr2.3:59614406-59614425 | MS.gene74545:intron | 50.0% |
| !!! | TTTGCACGTTTTTGGGGCCA+GGG | - | chr2.3:59611151-59611170 | None:intergenic | 50.0% |
| !!! | TTTTGCACGTTTTTGGGGCC+AGG | - | chr2.3:59611152-59611171 | None:intergenic | 50.0% |
| AAACCAGACCAAGCCGGGAT+CGG | + | chr2.3:59614379-59614398 | MS.gene74545:intron | 55.0% | |
| ACCACCAAACTGACCGATCC+CGG | - | chr2.3:59614395-59614414 | None:intergenic | 55.0% | |
| ACCAGGTGAACAGAGCGATG+CGG | + | chr2.3:59612824-59612843 | MS.gene74545:intron | 55.0% | |
| ACCCTACGGTGGACATCCAA+TGG | + | chr2.3:59613828-59613847 | MS.gene74545:CDS | 55.0% | |
| AGAGCGATGCGGTTGCAAGA+TGG | + | chr2.3:59612835-59612854 | MS.gene74545:intron | 55.0% | |
| CACAGGACCATGTCACAAGG+TGG | - | chr2.3:59612960-59612979 | None:intergenic | 55.0% | |
| CCCTTAATGGAGGATTCCCC+AGG | - | chr2.3:59611704-59611723 | None:intergenic | 55.0% | |
| CGACACAGGACCATGTCACA+AGG | - | chr2.3:59612963-59612982 | None:intergenic | 55.0% | |
| CTGGTGAGACCTTCAGGTCA+TGG | - | chr2.3:59614560-59614579 | None:intergenic | 55.0% | |
| GGAACCAAGATGGGAGGATG+AGG | - | chr2.3:59612601-59612620 | None:intergenic | 55.0% | |
| GGCTCCTCAACTGCATCAGT+TGG | - | chr2.3:59613997-59614016 | None:intergenic | 55.0% | |
| GTGAAGCTGCGGAGATTGGA+GGG | - | chr2.3:59612622-59612641 | None:intergenic | 55.0% | |
| TATGCAGCACCTCCACAGCT+TGG | + | chr2.3:59611321-59611340 | MS.gene74545:CDS | 55.0% | |
| TGGAGAGGAGACGGAAGAGA+AGG | + | chr2.3:59611769-59611788 | MS.gene74545:intron | 55.0% | |
| TGTGAAGCTGCGGAGATTGG+AGG | - | chr2.3:59612623-59612642 | None:intergenic | 55.0% | |
| TTGGAGGGAACCAAGATGGG+AGG | - | chr2.3:59612607-59612626 | None:intergenic | 55.0% | |
| ! | GGATCGGTCAGTTTGGTGGT+TGG | + | chr2.3:59614395-59614414 | MS.gene74545:intron | 55.0% |
| !! | TGTGTCGGTGCTGCACACAA+CGG | + | chr2.3:59612976-59612995 | MS.gene74545:intron | 55.0% |
| !!! | CGTTTTTGGGGCCAGGGAAT+AGG | - | chr2.3:59611145-59611164 | None:intergenic | 55.0% |
| ACCGCATCGCTCTGTTCACC+TGG | - | chr2.3:59612828-59612847 | None:intergenic | 60.0% | |
| AGCACCTCCACAGCTTGGCA+CGG | + | chr2.3:59611326-59611345 | MS.gene74545:CDS | 60.0% | |
| ATGGTGAGGGGGACAGAGTG+GGG | - | chr2.3:59612440-59612459 | None:intergenic | 60.0% | |
| CAAACTGACCGATCCCGGCT+TGG | - | chr2.3:59614390-59614409 | None:intergenic | 60.0% | |
| CAAGCCGGGATCGGTCAGTT+TGG | + | chr2.3:59614388-59614407 | MS.gene74545:intron | 60.0% | |
| CCTTATCCGCCGCAACCCTA+CGG | + | chr2.3:59613814-59613833 | MS.gene74545:CDS | 60.0% | |
| GACAGAGTGGGGAGGAGGTT+GGG | - | chr2.3:59612429-59612448 | None:intergenic | 60.0% | |
| GAGCAAGAGGATGTGGAGGC+CGG | + | chr2.3:59614782-59614801 | MS.gene74545:CDS | 60.0% | |
| GATGGTGAGGGGGACAGAGT+GGG | - | chr2.3:59612441-59612460 | None:intergenic | 60.0% | |
| GGATGTCCACCGTAGGGTTG+CGG | - | chr2.3:59613826-59613845 | None:intergenic | 60.0% | |
| GGCAGAGAATCGCAACGACC+AGG | + | chr2.3:59612807-59612826 | MS.gene74545:intron | 60.0% | |
| !! | ACGAGACGGAGGGCATCGAA+TGG | - | chr2.3:59611520-59611539 | None:intergenic | 60.0% |
| !! | GTTGTGTGCAGCACCGACAC+AGG | - | chr2.3:59612977-59612996 | None:intergenic | 60.0% |
| CACCTCCACAGCTTGGCACG+GGG | + | chr2.3:59611328-59611347 | MS.gene74545:CDS | 65.0% | |
| CCGTAGGGTTGCGGCGGATA+AGG | - | chr2.3:59613817-59613836 | None:intergenic | 65.0% | |
| GCACCTCCACAGCTTGGCAC+GGG | + | chr2.3:59611327-59611346 | MS.gene74545:CDS | 65.0% | |
| GCCGGGATCGGTCAGTTTGG+TGG | + | chr2.3:59614391-59614410 | MS.gene74545:intron | 65.0% | |
| GCTTGGCACGGGGCATGCTA+TGG | + | chr2.3:59611338-59611357 | MS.gene74545:CDS | 65.0% | |
| GGACAGAGTGGGGAGGAGGT+TGG | - | chr2.3:59612430-59612449 | None:intergenic | 65.0% | |
| GGATGGTGAGGGGGACAGAG+TGG | - | chr2.3:59612442-59612461 | None:intergenic | 65.0% | |
| TATCCGCCGCAACCCTACGG+TGG | + | chr2.3:59613817-59613836 | MS.gene74545:CDS | 65.0% | |
| TGTCCACCGTAGGGTTGCGG+CGG | - | chr2.3:59613823-59613842 | None:intergenic | 65.0% | |
| !! | CGGAGGGCATCGAATGGCTG+TGG | - | chr2.3:59611514-59611533 | None:intergenic | 65.0% |
| !! | TGACCGATCCCGGCTTGGTC+TGG | - | chr2.3:59614385-59614404 | None:intergenic | 65.0% |
| AGGGGGACAGAGTGGGGAGG+AGG | - | chr2.3:59612434-59612453 | None:intergenic | 70.0% | |
| GCATGCCCCGTGCCAAGCTG+TGG | - | chr2.3:59611336-59611355 | None:intergenic | 70.0% | |
| GTGAGGGGGACAGAGTGGGG+AGG | - | chr2.3:59612437-59612456 | None:intergenic | 70.0% | |
| TGCCCCGTGCCAAGCTGTGG+AGG | - | chr2.3:59611333-59611352 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 59610516 | 59614927 | 59610516 | ID=MS.gene74545 |
| chr2.3 | mRNA | 59610516 | 59614927 | 59610516 | ID=MS.gene74545.t1;Parent=MS.gene74545 |
| chr2.3 | exon | 59610516 | 59610543 | 59610516 | ID=MS.gene74545.t1.exon1;Parent=MS.gene74545.t1 |
| chr2.3 | CDS | 59610516 | 59610543 | 59610516 | ID=cds.MS.gene74545.t1;Parent=MS.gene74545.t1 |
| chr2.3 | exon | 59611220 | 59611359 | 59611220 | ID=MS.gene74545.t1.exon2;Parent=MS.gene74545.t1 |
| chr2.3 | CDS | 59611220 | 59611359 | 59611220 | ID=cds.MS.gene74545.t1;Parent=MS.gene74545.t1 |
| chr2.3 | exon | 59613745 | 59613849 | 59613745 | ID=MS.gene74545.t1.exon3;Parent=MS.gene74545.t1 |
| chr2.3 | CDS | 59613745 | 59613849 | 59613745 | ID=cds.MS.gene74545.t1;Parent=MS.gene74545.t1 |
| chr2.3 | exon | 59613949 | 59614113 | 59613949 | ID=MS.gene74545.t1.exon4;Parent=MS.gene74545.t1 |
| chr2.3 | CDS | 59613949 | 59614113 | 59613949 | ID=cds.MS.gene74545.t1;Parent=MS.gene74545.t1 |
| chr2.3 | exon | 59614742 | 59614927 | 59614742 | ID=MS.gene74545.t1.exon5;Parent=MS.gene74545.t1 |
| chr2.3 | CDS | 59614742 | 59614927 | 59614742 | ID=cds.MS.gene74545.t1;Parent=MS.gene74545.t1 |
| Gene Sequence |
| Protein sequence |
