AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003322

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003322.t1 MTR_2g030490 96.078 1377 54 0 1 1377 1 1377 0.0 2742
MS.gene003322.t1 MTR_1g060740 83.913 1380 219 2 1 1377 1 1380 0.0 2416
MS.gene003322.t1 MTR_8g069975 83.921 1219 192 1 1 1215 1 1219 0.0 2147
MS.gene003322.t1 MTR_4g116860 34.072 1444 840 39 10 1375 28 1437 0.0 681
MS.gene003322.t1 MTR_7g118350 30.330 910 495 29 6 797 198 1086 1.48e-99 352
MS.gene003322.t1 MTR_7g118350 37.108 574 295 15 827 1347 1192 1752 1.36e-96 343
MS.gene003322.t1 MTR_3g105390 31.076 827 479 19 13 779 44 839 2.55e-99 351
MS.gene003322.t1 MTR_3g105390 34.608 549 319 6 832 1342 951 1497 6.08e-83 301
MS.gene003322.t1 MTR_7g118350 30.201 894 478 27 6 797 198 1047 1.58e-98 349
MS.gene003322.t1 MTR_7g118350 37.108 574 295 15 827 1347 1153 1713 1.22e-96 343
MS.gene003322.t1 MTR_1g063410 81.897 116 19 1 843 956 1 116 5.29e-59 199
MS.gene003322.t1 MTR_3g079980 42.541 181 100 2 1140 1320 230 406 3.11e-35 143
MS.gene003322.t1 MTR_3g079860 43.094 181 99 2 1140 1320 169 345 4.10e-34 139
MS.gene003322.t1 MTR_3g080000 38.674 181 105 2 1140 1320 72 246 4.75e-33 131
MS.gene003322.t1 MTR_3g096700 34.959 246 144 8 1136 1375 8 243 9.27e-33 131
MS.gene003322.t1 MTR_8g077780 85.938 64 9 0 1090 1153 4 67 3.64e-32 120
MS.gene003322.t1 MTR_8g058930 33.333 246 148 8 1136 1375 8 243 2.66e-31 127
MS.gene003322.t1 MTR_1g063400 64.000 75 26 1 889 962 45 119 2.10e-22 95.5
MS.gene003322.t1 MTR_1g063400 68.966 58 18 0 759 816 2 59 4.43e-20 88.6
MS.gene003322.t1 MTR_8g077770 84.783 46 7 0 1128 1173 6 51 7.96e-20 85.5
MS.gene003322.t1 MTR_3g080010 52.632 57 27 0 1264 1320 24 80 1.36e-13 70.1
MS.gene003322.t1 MTR_6g071535 38.793 116 61 4 1264 1376 131 239 1.20e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003322.t1 AT3G03300 53.863 1398 605 18 1 1375 3 1383 0.0 1472
MS.gene003322.t1 AT3G03300 53.863 1398 605 18 1 1375 3 1383 0.0 1472
MS.gene003322.t1 AT3G03300 52.843 1319 584 17 80 1375 66 1369 0.0 1366
MS.gene003322.t1 AT3G03300 51.267 1184 540 16 215 1375 1 1170 0.0 1173
MS.gene003322.t1 AT5G20320 31.958 1430 869 35 24 1375 124 1527 0.0 624
MS.gene003322.t1 AT5G20320 31.259 1430 865 36 24 1375 124 1513 0.0 598
MS.gene003322.t1 AT5G20320 31.274 1327 809 34 127 1375 1 1302 7.89e-171 550
MS.gene003322.t1 AT1G01040 30.464 883 492 24 24 801 249 1114 4.62e-103 363
MS.gene003322.t1 AT1G01040 38.699 584 302 20 809 1347 1197 1769 2.82e-95 340
MS.gene003322.t1 AT1G01040 30.430 884 492 25 24 801 249 1115 1.11e-101 359
MS.gene003322.t1 AT1G01040 38.356 584 304 19 809 1347 1198 1770 2.75e-95 340
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 461 1177 2.39e-85 306
MS.gene003322.t1 AT3G43920 26.389 288 184 8 248 525 45 314 9.44e-16 84.0
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 678 1394 3.56e-85 307
MS.gene003322.t1 AT3G43920 30.402 523 309 12 24 525 43 531 1.06e-55 214
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 679 1395 4.05e-85 307
MS.gene003322.t1 AT3G43920 30.710 521 306 12 26 525 46 532 5.17e-56 215
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 679 1395 4.83e-85 306
MS.gene003322.t1 AT3G43920 30.710 521 306 12 26 525 46 532 5.30e-56 214
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 689 1405 5.55e-85 307
MS.gene003322.t1 AT3G43920 30.843 522 314 12 26 525 46 542 5.10e-57 218
MS.gene003322.t1 AT3G43920 32.418 728 400 23 702 1348 640 1356 5.57e-85 306
MS.gene003322.t1 AT3G43920 28.431 510 293 14 26 525 46 493 4.65e-43 172
MS.gene003322.t1 AT4G15417 35.628 247 148 5 1129 1374 21 257 2.75e-36 139
MS.gene003322.t1 AT4G15417 35.628 247 148 5 1129 1374 46 282 5.15e-36 139
MS.gene003322.t1 AT3G20420 32.218 239 149 7 1140 1374 63 292 2.36e-24 107
MS.gene003322.t1 AT5G45150 33.523 176 107 3 1136 1310 3 169 1.76e-23 108
MS.gene003322.t1 AT5G45150 30.337 178 106 4 1136 1309 414 577 6.13e-15 80.9
MS.gene003322.t1 AT5G45150 30.337 178 106 4 1136 1309 218 381 4.54e-15 81.3
MS.gene003322.t1 AT5G45150 30.337 178 106 4 1136 1309 218 381 4.54e-15 81.3
MS.gene003322.t1 AT1G35530 30.000 170 111 4 358 522 436 602 6.61e-12 71.2
MS.gene003322.t1 AT1G35530 30.488 164 106 4 358 516 436 596 1.18e-11 70.5
MS.gene003322.t1 AT1G35530 30.488 164 106 4 358 516 436 596 1.29e-11 70.1
MS.gene003322.t1 AT1G35530 30.488 164 106 4 358 516 438 598 1.30e-11 70.1

Find 282 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCATGCATCCAATTTC+TGG 0.127980 2.4:-59224644 None:intergenic
TCCCTGTAAAACCGGAATTT+TGG 0.129695 2.4:-59222434 None:intergenic
TGTATACCTTTCGACTTAAT+TGG 0.130476 2.4:-59221489 None:intergenic
AATCACACTGATTTGAAAAT+TGG 0.160925 2.4:+59220683 MS.gene003322:CDS
GCTCGTAACGCCGTCGTTTC+TGG 0.176681 2.4:-59230171 None:intergenic
CTTATGCAATTGAACCTTAA+TGG 0.180930 2.4:-59229270 None:intergenic
CTTGGTTGTTCTTCGGAATA+TGG 0.189239 2.4:-59224479 None:intergenic
GATGGCTGCATTGTTGTTTA+TGG 0.189415 2.4:+59226801 MS.gene003322:CDS
GCCCTCCAGCTATTGTATTT+TGG 0.207013 2.4:-59223299 None:intergenic
TGACAATATGAAATTCAATT+TGG 0.210114 2.4:+59223133 MS.gene003322:CDS
TTATGCAATGTCTGCCATTA+AGG 0.236425 2.4:+59229256 MS.gene003322:CDS
GGTGCTATATTTGTTGATTC+AGG 0.243577 2.4:+59230008 MS.gene003322:CDS
AATTCTTATGAATCGTAAAA+TGG 0.251258 2.4:+59224870 MS.gene003322:CDS
TATCAAACTGTCAATGATAA+AGG 0.267148 2.4:+59221196 MS.gene003322:CDS
TGGAACGTATTGGGGAGATA+TGG 0.271830 2.4:+59220703 MS.gene003322:CDS
TCCTATGTATCTCAAGTTTA+CGG 0.271875 2.4:-59224696 None:intergenic
GAAGCAGAGGTGGAGGAATT+TGG 0.271988 2.4:+59224317 MS.gene003322:CDS
GTAATCTGAATTTCGCATTC+TGG 0.284308 2.4:-59223616 None:intergenic
TTTGAAAATTGGAACGTATT+GGG 0.284803 2.4:+59220694 MS.gene003322:CDS
GAAAAGCATAAGGCCTCTTT+TGG 0.290771 2.4:+59230052 MS.gene003322:CDS
CATTAGTTCCCGAATAGATT+TGG 0.291574 2.4:-59221646 None:intergenic
GAGATATGGGTGTTGATTAC+TGG 0.294043 2.4:+59220717 MS.gene003322:CDS
GTCAAGCTTGATCCAGAAAT+TGG 0.296264 2.4:+59224632 MS.gene003322:CDS
ATGAAATTCAATTTGGAAAT+GGG 0.300487 2.4:+59223140 MS.gene003322:CDS
ATTACATATTGATGGTAAAA+AGG 0.304445 2.4:+59223634 MS.gene003322:CDS
TGGTATTTGGTTGGCTTTGA+AGG 0.305816 2.4:+59222788 MS.gene003322:CDS
CTAGCAAATGGAAGTGCATT+TGG 0.313713 2.4:-59220247 None:intergenic
CCCTATTGAAGTATTCGTTC+AGG 0.314249 2.4:+59226920 MS.gene003322:CDS
GCTTAGAAGAGCTTGGTATT+TGG 0.314684 2.4:+59222775 MS.gene003322:CDS
TTCGCATTCTGGCACGGCCT+CGG 0.319985 2.4:-59223605 None:intergenic
CAACCTTGTCCAAATCTATT+CGG 0.324551 2.4:+59221637 MS.gene003322:CDS
GTATACCTTTCGACTTAATT+GGG 0.340626 2.4:-59221488 None:intergenic
TGAGAAACTAATACAACTTT+GGG 0.342897 2.4:-59220521 None:intergenic
TATGAAATTCAATTTGGAAA+TGG 0.344723 2.4:+59223139 MS.gene003322:CDS
AGTTCATTTAATTCTCTAAT+CGG 0.345264 2.4:-59230110 None:intergenic
TCCTATTGTTTGCAGGTACT+TGG 0.347435 2.4:+59229963 MS.gene003322:intron
GGTCAGTCTTCATCAAGTTT+TGG 0.347844 2.4:+59229356 MS.gene003322:CDS
TTGAAATTGAAACATTCATA+TGG 0.349463 2.4:+59222920 MS.gene003322:CDS
ATTTGAAAATTGGAACGTAT+TGG 0.356290 2.4:+59220693 MS.gene003322:CDS
TAATAACCAGATTGCAACTT+TGG 0.357847 2.4:-59223542 None:intergenic
GTATCACCTTGTACATGAAT+AGG 0.358812 2.4:-59224197 None:intergenic
ATGCACTTCCATTTGCTAGA+AGG 0.358981 2.4:+59220251 MS.gene003322:CDS
TTGAGAAACTAATACAACTT+TGG 0.364476 2.4:-59220522 None:intergenic
TCAGATCCTCGGTGGACTAT+TGG 0.364761 2.4:+59223110 MS.gene003322:intron
CCCTGAACGAATACTTCAAT+AGG 0.366092 2.4:-59226921 None:intergenic
TATGAATGTTTCAATTTCAA+TGG 0.367453 2.4:-59222917 None:intergenic
CCGAAGACCTGGATCATTCC+TGG 0.367949 2.4:+59226634 MS.gene003322:CDS
GTGTACTTGGAGACTGGTTC+TGG 0.370361 2.4:+59220413 MS.gene003322:CDS
AAATTCAGATTACATATTGA+TGG 0.370946 2.4:+59223626 MS.gene003322:CDS
TTCAATTTCAATGGAAGATA+AGG 0.371258 2.4:-59222908 None:intergenic
CCGATGTGGGACAAACAAAA+AGG 0.372488 2.4:+59224140 MS.gene003322:CDS
ACAGTCATTATACAAGCATA+TGG 0.373279 2.4:-59221260 None:intergenic
CACCACTGATATGATGGAAT+TGG 0.373891 2.4:+59225137 MS.gene003322:CDS
AATGCTGCCCTCTCTAAGTT+AGG 0.379961 2.4:+59226401 MS.gene003322:CDS
TCGCATTCTGGCACGGCCTC+GGG 0.385187 2.4:-59223604 None:intergenic
GGAATGCAAAACTCCCTTGC+AGG 0.386451 2.4:-59230279 None:intergenic
GGTCTCCTTGCATGACTTTG+TGG 0.388789 2.4:-59226249 None:intergenic
TGGTAGCATCTAGGCACTTC+AGG 0.392304 2.4:-59226991 None:intergenic
GCTTCTTCAACGACAATAGA+AGG 0.393670 2.4:-59224299 None:intergenic
AAGTTATGTTCCATTTGAAT+TGG 0.393779 2.4:+59224499 MS.gene003322:CDS
AAACTTCCTGATTTAGCTCC+AGG 0.394976 2.4:-59226652 None:intergenic
GGATGGATCGTTAATGTATC+AGG 0.395818 2.4:-59230089 None:intergenic
ACATTCATATGGGGTATCTC+TGG 0.399735 2.4:+59222931 MS.gene003322:CDS
AGATTCCAAGTTAGTATCCT+TGG 0.402694 2.4:+59224847 MS.gene003322:CDS
TGGAGGGCTAAATACATTGC+AGG 0.404084 2.4:+59223314 MS.gene003322:CDS
TCCCATTGTCCCTGTAAAAC+CGG 0.404911 2.4:-59222442 None:intergenic
TGCAAACAACTTCATAAGAT+TGG 0.405492 2.4:+59224254 MS.gene003322:CDS
TTGATTTGCACTCCTCATAA+TGG 0.406792 2.4:+59225102 MS.gene003322:CDS
CAACATCTACTCCAAAATTC+CGG 0.408724 2.4:+59222423 MS.gene003322:CDS
AACATAACTTGGTTGTTCTT+CGG 0.412365 2.4:-59224486 None:intergenic
AGATGTCCAAAGTTGCAATC+TGG 0.413068 2.4:+59223536 MS.gene003322:CDS
CCTGCAGCGACTTGAATACT+TGG 0.413321 2.4:+59229124 MS.gene003322:intron
GGAGGAAGCTCTGATGGAAA+TGG 0.413623 2.4:+59220198 MS.gene003322:CDS
ATCCAGGTCTTCGGATCAAA+AGG 0.413934 2.4:-59226625 None:intergenic
TTCAATAAGACAGCATACTT+TGG 0.414779 2.4:-59223174 None:intergenic
TGTTGTTTATGGATTGGATT+GGG 0.415903 2.4:+59226812 MS.gene003322:CDS
CAATGTAAGGAGAAGGCTTT+CGG 0.416611 2.4:-59220484 None:intergenic
ACTTGATTCACCAATTCAAA+TGG 0.418939 2.4:-59224509 None:intergenic
GAAGTTGTTTGCATGCTTCA+AGG 0.421943 2.4:-59224244 None:intergenic
ACAATTCAGTGTCGGTATCA+TGG 0.423979 2.4:+59225024 MS.gene003322:CDS
TGTACATGAATAGGCTGTAT+AGG 0.425526 2.4:-59224188 None:intergenic
AAAACTAACCTTCTAGCAAA+TGG 0.425780 2.4:-59220259 None:intergenic
ACTGAGAAGGGTTTCGTTTG+TGG 0.426388 2.4:+59225060 MS.gene003322:CDS
TGCTTCCAAAATACAATAGC+TGG 0.427286 2.4:+59223294 MS.gene003322:CDS
CTGCATTGTTGTTTATGGAT+TGG 0.430699 2.4:+59226806 MS.gene003322:CDS
TGAACATCAACGCCTACTTA+AGG 0.430710 2.4:+59225365 MS.gene003322:CDS
TATCATCATCAATTGAGATC+TGG 0.431451 2.4:+59221426 MS.gene003322:CDS
ATCATTCCTGGAGCTAAATC+AGG 0.431871 2.4:+59226646 MS.gene003322:CDS
GTGTTTCGACAGAGGTAGTC+TGG 0.434100 2.4:+59224673 MS.gene003322:CDS
CAATTCAGTGTCGGTATCAT+GGG 0.434987 2.4:+59225025 MS.gene003322:CDS
GCAATGAATTGCCTCTCATA+TGG 0.435610 2.4:-59226859 None:intergenic
TGAAATTGAAACATTCATAT+GGG 0.436235 2.4:+59222921 MS.gene003322:CDS
GCTAAATACATTGCAGGAAC+CGG 0.437209 2.4:+59223320 MS.gene003322:CDS
CATTAATCTCTCACCAGATC+AGG 0.439341 2.4:+59224721 MS.gene003322:CDS
AGGAAACACCGTCTGTTGAT+TGG 0.440214 2.4:+59224974 MS.gene003322:CDS
CGATTAGAGAAATACCTTGA+TGG 0.442874 2.4:+59223772 MS.gene003322:CDS
AATTCAAATGGAACATAACT+TGG 0.443042 2.4:-59224497 None:intergenic
TGCTCCCGTCTCCCTTCAGA+TGG 0.445178 2.4:+59223946 MS.gene003322:CDS
GGAACGTATTGGGGAGATAT+GGG 0.446673 2.4:+59220704 MS.gene003322:CDS
TTGAAAATTGGAACGTATTG+GGG 0.451107 2.4:+59220695 MS.gene003322:CDS
GATGTTGTCGAAGCACTAAT+TGG 0.451753 2.4:+59226754 MS.gene003322:CDS
CCAGGAATGATCCAGGTCTT+CGG 0.457172 2.4:-59226634 None:intergenic
GGCTGTATAGGACAACTCTT+AGG 0.459575 2.4:-59224176 None:intergenic
ACTACATATAAGAAGTACTT+TGG 0.463035 2.4:+59225198 MS.gene003322:CDS
TAAGTATATCAAAGTAATGC+TGG 0.463709 2.4:-59223920 None:intergenic
TAGCTATCAGCTTGAAGCAT+TGG 0.465177 2.4:+59220364 MS.gene003322:intron
ACCCTTCTCAGTCAATATCT+TGG 0.465525 2.4:-59225049 None:intergenic
TTACATCACCACTGATATGA+TGG 0.466262 2.4:+59225131 MS.gene003322:CDS
AGAAGAGCTTGGTATTTGGT+TGG 0.469495 2.4:+59222779 MS.gene003322:CDS
AACCTTGTCCAAATCTATTC+GGG 0.469715 2.4:+59221638 MS.gene003322:CDS
GGAAGAATTTCGTAAGGGAT+TGG 0.473189 2.4:+59223388 MS.gene003322:CDS
TGCAACATCAATTCTTGAAG+AGG 0.475195 2.4:+59223509 MS.gene003322:CDS
AACTGCACACCGTGGGAGAT+GGG 0.476843 2.4:-59223572 None:intergenic
TACCGACACTGAATTGTAGA+TGG 0.477105 2.4:-59225018 None:intergenic
CTATACTGCTTTCTTGCTTG+AGG 0.477888 2.4:+59221165 MS.gene003322:CDS
AGATATGGGTGTTGATTACT+GGG 0.478645 2.4:+59220718 MS.gene003322:CDS
TGTTGATTCAGGATACGATA+AGG 0.478957 2.4:+59230019 MS.gene003322:CDS
TGAAAATACCATAGTGTACT+TGG 0.479294 2.4:+59220400 MS.gene003322:CDS
GTATATCCTGGCATGTCACC+TGG 0.479304 2.4:+59229191 MS.gene003322:CDS
GACTATGGAGGAAGCTCTGA+TGG 0.479412 2.4:+59220192 None:intergenic
CATTCATATGGGGTATCTCT+GGG 0.482743 2.4:+59222932 MS.gene003322:CDS
ACCAGTCTCCAAGTACACTA+TGG 0.482931 2.4:-59220408 None:intergenic
CATTTAATTCTCTAATCGGA+TGG 0.486667 2.4:-59230106 None:intergenic
GATACATATTAAAGAGCTGT+TGG 0.487609 2.4:-59226328 None:intergenic
TGAATGTCTACTTGAGTACA+AGG 0.488358 2.4:+59223193 MS.gene003322:CDS
TTGTTGTTTATGGATTGGAT+TGG 0.489156 2.4:+59226811 MS.gene003322:CDS
CCTATTGAAGTATTCGTTCA+GGG 0.490841 2.4:+59226921 MS.gene003322:CDS
AAGCAAGAAAGCAGTATAGC+AGG 0.491110 2.4:-59221161 None:intergenic
AAACTGCACACCGTGGGAGA+TGG 0.492448 2.4:-59223573 None:intergenic
GCTGCCGTCTATTGCTATAG+AGG 0.492865 2.4:+59224954 MS.gene003322:CDS
ATGATTATAGAGCAGAGTTC+AGG 0.494590 2.4:-59225638 None:intergenic
CTGAATTGTAGATGGATGTA+TGG 0.497487 2.4:-59225010 None:intergenic
CCTGAACGAATACTTCAATA+GGG 0.498705 2.4:-59226920 None:intergenic
CCATCTCGCCACCAGCGCTA+AGG 0.501726 2.4:-59226783 None:intergenic
GCTACGCTTGATAAATTTGA+CGG 0.502107 2.4:+59229335 MS.gene003322:CDS
CTGAATTTCGCATTCTGGCA+CGG 0.505315 2.4:-59223611 None:intergenic
CATTGCAGCTATTGTCCTTG+AGG 0.505983 2.4:+59223256 MS.gene003322:CDS
CTGGTATCACTGAGCTTCCT+CGG 0.506338 2.4:+59221445 MS.gene003322:CDS
GAAACTCACCTCTGAAAGTA+GGG 0.507548 2.4:+59225163 MS.gene003322:CDS
CATAGACTTGAGTCGTTGCT+TGG 0.515033 2.4:+59225716 MS.gene003322:CDS
CTGAGTTGCAGGGCTTCATA+CGG 0.516386 2.4:+59226596 MS.gene003322:intron
CCTTAGCGCTGGTGGCGAGA+TGG 0.516895 2.4:+59226783 MS.gene003322:CDS
TGTTTGTCCCACATCGGAGT+CGG 0.518863 2.4:-59224134 None:intergenic
CTGCAAAGTTGCATACCATC+TGG 0.520442 2.4:+59222997 MS.gene003322:CDS
CTCATGTCTGTTAACTGCCC+AGG 0.520812 2.4:-59229209 None:intergenic
CTATAGCAATAGACGGCAGC+AGG 0.520948 2.4:-59224951 None:intergenic
GCCAAGATATTGACTGAGAA+GGG 0.524045 2.4:+59225048 MS.gene003322:CDS
AATGACTCTAATGCATTCAA+AGG 0.524255 2.4:+59221665 MS.gene003322:CDS
AACTGCCCAGGTGACATGCC+AGG 0.524659 2.4:-59229197 None:intergenic
GTCACAAGGGGCTCCAAAAG+AGG 0.527156 2.4:-59230065 None:intergenic
AATTGAGGTAATTGCGGATG+GGG 0.527403 2.4:+59230199 MS.gene003322:CDS
GGAAACTCACCTCTGAAAGT+AGG 0.528220 2.4:+59225162 MS.gene003322:CDS
GTACGTACCTGGTAGCATCT+AGG 0.528831 2.4:-59227000 None:intergenic
GCAACATCAATTCTTGAAGA+GGG 0.530195 2.4:+59223510 MS.gene003322:CDS
AATAAGACAGCATACTTTGG+AGG 0.532236 2.4:-59223171 None:intergenic
TCTGACATTAACTAGATTGT+CGG 0.532345 2.4:-59226887 None:intergenic
ATTGGTGCATTCCTTAGCGC+TGG 0.532769 2.4:+59226772 MS.gene003322:CDS
ATTACTGGGATGGAGATGTA+TGG 0.533141 2.4:+59220732 MS.gene003322:CDS
TCATCATTTGCCCACCATCA+AGG 0.533627 2.4:-59223786 None:intergenic
AGGCTGTGTGGAAAAGCATA+AGG 0.533917 2.4:+59230042 MS.gene003322:CDS
CATTTGTATCGAGTATATCC+TGG 0.535208 2.4:+59229179 MS.gene003322:CDS
AACGCCGTCGTTTCTGGACA+AGG 0.536575 2.4:-59230165 None:intergenic
ATGGGTGTTGATTACTGGGA+TGG 0.537119 2.4:+59220722 MS.gene003322:CDS
CTGACATTAACTAGATTGTC+GGG 0.538193 2.4:-59226886 None:intergenic
TTGTGTTTACTTCAATTGCA+AGG 0.538732 2.4:-59230300 None:intergenic
CTGCAGCGACTTGAATACTT+GGG 0.539822 2.4:+59229125 MS.gene003322:intron
GAATTCCAAGGATACTAACT+TGG 0.540130 2.4:-59224852 None:intergenic
CGTTGAAGAAGCAGAGGTGG+AGG 0.540842 2.4:+59224310 MS.gene003322:CDS
TGGGATGGAGATGTATGGAA+AGG 0.542865 2.4:+59220737 MS.gene003322:CDS
TAACCCATCTGAAGGGAGAC+GGG 0.543018 2.4:-59223950 None:intergenic
TGAAATTCAATTTGGAAATG+GGG 0.543028 2.4:+59223141 MS.gene003322:CDS
TACTTGAGAGATACCTGATC+TGG 0.546308 2.4:-59224734 None:intergenic
ATACTTGGGAGACTCGGTGC+TGG 0.548546 2.4:+59229139 MS.gene003322:CDS
TACGATTCATAAGAATTCCA+AGG 0.552149 2.4:-59224864 None:intergenic
ATGTAAGTACGACCATTATG+AGG 0.552449 2.4:-59225114 None:intergenic
AATGTTCTTACTCAGATCCT+CGG 0.555625 2.4:+59223099 MS.gene003322:intron
ACCATAGTGTACTTGGAGAC+TGG 0.555768 2.4:+59220407 MS.gene003322:CDS
TAAAGCGTGCTAAGTGGTAC+TGG 0.556543 2.4:-59225665 None:intergenic
GGTGCATTCCTTAGCGCTGG+TGG 0.558438 2.4:+59226775 MS.gene003322:CDS
TATACCTTTCGACTTAATTG+GGG 0.561968 2.4:-59221487 None:intergenic
GATTGTGGAAGAATTTCGTA+AGG 0.562819 2.4:+59223382 MS.gene003322:CDS
AAAATTGAGGTAATTGCGGA+TGG 0.564270 2.4:+59230197 MS.gene003322:CDS
TGCCACAAGACTAGCCTGCA+AGG 0.564845 2.4:+59230265 MS.gene003322:CDS
AAACAAGATTCAAACATTCA+AGG 0.564848 2.4:+59225781 MS.gene003322:CDS
AGACAAACTAACCCATCTGA+AGG 0.565933 2.4:-59223958 None:intergenic
TATTCGAAGAATTAGCCAAA+AGG 0.567394 2.4:+59222477 MS.gene003322:CDS
TTCAAGACTCTCACATGGAA+GGG 0.567453 2.4:-59223833 None:intergenic
TTTAGCTCCAGGAATGATCC+AGG 0.571096 2.4:-59226641 None:intergenic
TTTCAAGACTCTCACATGGA+AGG 0.571188 2.4:-59223834 None:intergenic
CAGTCATTATACAAGCATAT+GGG 0.573251 2.4:-59221259 None:intergenic
AATTGCAACCTAACTTAGAG+AGG 0.573372 2.4:-59226409 None:intergenic
CTTTAAACCGACTCCGATGT+GGG 0.574135 2.4:+59224127 MS.gene003322:CDS
AACCTTGGGGAATGTAGCAT+CGG 0.574451 2.4:-59229387 None:intergenic
GACATCATAGAGTCTCTAGC+TGG 0.576299 2.4:+59229987 MS.gene003322:CDS
TCCCTTGCAGGCTAGTCTTG+TGG 0.576741 2.4:-59230267 None:intergenic
CTCTAGTGACTCATAATGAA+AGG 0.580613 2.4:-59226270 None:intergenic
TTAATGTATCAGGTGTCACA+AGG 0.581564 2.4:-59230079 None:intergenic
GCTCCCGTCTCCCTTCAGAT+GGG 0.581607 2.4:+59223947 MS.gene003322:CDS
GGCCAAGATATTGACTGAGA+AGG 0.583885 2.4:+59225047 MS.gene003322:CDS
GCCGTAAACTTGAGATACAT+AGG 0.584349 2.4:+59224695 MS.gene003322:CDS
AAATTGAGGTAATTGCGGAT+GGG 0.585861 2.4:+59230198 MS.gene003322:CDS
ATGTTTATGTAGCTCTTGAG+AGG 0.586068 2.4:-59229306 None:intergenic
CAGCTTCAGTGCTTGCAACT+CGG 0.587345 2.4:-59223882 None:intergenic
GTAGCTCTTGAGAGGCATGA+AGG 0.588736 2.4:-59229298 None:intergenic
TGAAGTGCCTAGATGCTACC+AGG 0.588849 2.4:+59226993 MS.gene003322:CDS
TAGATTTGACCCATCTCCCA+CGG 0.589452 2.4:+59223563 MS.gene003322:CDS
GATGAATGCCACCATGCTGC+GGG 0.589867 2.4:+59221230 MS.gene003322:CDS
ATACAGCCTATTCATGTACA+AGG 0.591808 2.4:+59224191 MS.gene003322:CDS
CGTTACGAGCTGTAAAATTG+AGG 0.592051 2.4:+59230184 MS.gene003322:CDS
AATGTATAAAGCGTGCTAAG+TGG 0.593743 2.4:-59225671 None:intergenic
ATTATAGAGCAGAGTTCAGG+AGG 0.593894 2.4:-59225635 None:intergenic
AGGGTCTTCTTAGTGTGAAG+AGG 0.595542 2.4:+59226363 MS.gene003322:CDS
TTAATATCAATCCATATGAG+AGG 0.595809 2.4:+59226848 MS.gene003322:CDS
AACACAGCAATGTAAGGAGA+AGG 0.596438 2.4:-59220491 None:intergenic
TCACCATCCCCTACTTTCAG+AGG 0.597394 2.4:-59225171 None:intergenic
GGGTCTTCTTAGTGTGAAGA+GGG 0.599511 2.4:+59226364 MS.gene003322:CDS
TCCAGGTCTTCGGATCAAAA+GGG 0.601840 2.4:-59226624 None:intergenic
ACTTGAATACTTGGGAGACT+CGG 0.603022 2.4:+59229133 MS.gene003322:CDS
AAACGTGTCTTGCCTTAAGT+AGG 0.605192 2.4:-59225377 None:intergenic
TCAAGTCTATGCATGATCGA+TGG 0.606209 2.4:-59225704 None:intergenic
ACTTTAAACCGACTCCGATG+TGG 0.608145 2.4:+59224126 MS.gene003322:CDS
AACAGACATGAGGTCTGCAT+CGG 0.609651 2.4:+59229220 MS.gene003322:CDS
ATTCATGAGTTCGAGTACAA+AGG 0.610306 2.4:+59230224 MS.gene003322:CDS
GAAATTGAAACATTCATATG+GGG 0.611135 2.4:+59222922 MS.gene003322:CDS
CTGTAAAATTGAGGTAATTG+CGG 0.612087 2.4:+59230193 MS.gene003322:CDS
GCATCCCCAATTAAGTCGAA+AGG 0.614532 2.4:+59221483 MS.gene003322:CDS
CTAACCCATCTGAAGGGAGA+CGG 0.616544 2.4:-59223951 None:intergenic
TAGAGAAATACCTTGATGGT+GGG 0.617516 2.4:+59223776 MS.gene003322:CDS
ATTGTGGAAGAATTTCGTAA+GGG 0.620812 2.4:+59223383 MS.gene003322:CDS
GACAAACTAACCCATCTGAA+GGG 0.622955 2.4:-59223957 None:intergenic
ATGGGTGTCTACCCGCAGCA+TGG 0.623501 2.4:-59221241 None:intergenic
TATGAGTCACTAGAGACACT+TGG 0.623897 2.4:+59226278 MS.gene003322:CDS
GCGGAGATAGAAAATTGAAA+CGG 0.624385 2.4:+59226719 MS.gene003322:CDS
TGTCGTTGAAGAAGCAGAGG+TGG 0.628120 2.4:+59224307 MS.gene003322:CDS
TTCCCGAATAGATTTGGACA+AGG 0.631090 2.4:-59221640 None:intergenic
GCCACAAGACTAGCCTGCAA+GGG 0.633250 2.4:+59230266 MS.gene003322:CDS
TATATCCTGGCATGTCACCT+GGG 0.634922 2.4:+59229192 MS.gene003322:CDS
TGGTGGGCAAATGATGAGGA+AGG 0.635071 2.4:+59223792 MS.gene003322:CDS
TTAGAGAAATACCTTGATGG+TGG 0.635106 2.4:+59223775 MS.gene003322:CDS
TCACCTCTGAAAGTAGGGGA+TGG 0.635947 2.4:+59225168 MS.gene003322:CDS
GGTGTCTACCCGCAGCATGG+TGG 0.636359 2.4:-59221238 None:intergenic
TTTGACATGTGTTTCGACAG+AGG 0.636534 2.4:+59224665 MS.gene003322:CDS
ACTGATATGATGGAATTGGA+CGG 0.637117 2.4:+59225141 MS.gene003322:CDS
TTCCAAAATACAATAGCTGG+AGG 0.637552 2.4:+59223297 MS.gene003322:CDS
GTTTCCTCTATAGCAATAGA+CGG 0.638364 2.4:-59224958 None:intergenic
ATTGCAACCTAACTTAGAGA+GGG 0.640096 2.4:-59226408 None:intergenic
TATTGTCGTTGAAGAAGCAG+AGG 0.640281 2.4:+59224304 MS.gene003322:CDS
ATCCGATGCTACATTCCCCA+AGG 0.640388 2.4:+59229385 MS.gene003322:CDS
AATGACCACAAAGTCATGCA+AGG 0.640673 2.4:+59226244 MS.gene003322:CDS
GTAGCTTCGAAGAAGCATGA+TGG 0.641178 2.4:-59220450 None:intergenic
GTCCAATTCCATCATATCAG+TGG 0.645038 2.4:-59225139 None:intergenic
TTCAGGAGGTAATTCAACAA+AGG 0.645659 2.4:-59225621 None:intergenic
TCATGGATATAAACAAGCGA+AGG 0.646136 2.4:+59225419 MS.gene003322:CDS
AGGAGAAATAGAGAAACATG+AGG 0.649599 2.4:+59220757 MS.gene003322:CDS
TATAAACAAGCGAAGGACAG+AGG 0.649601 2.4:+59225426 MS.gene003322:CDS
TCACTTTCAAGACTCTCACA+TGG 0.651396 2.4:-59223838 None:intergenic
ATCCATCTACAATTCAGTGT+CGG 0.655363 2.4:+59225016 MS.gene003322:CDS
AAGCGTTCAATAGAACCTCA+AGG 0.655412 2.4:-59223271 None:intergenic
GGATGAATGCCACCATGCTG+CGG 0.656202 2.4:+59221229 MS.gene003322:CDS
AATGTATCAGGTGTCACAAG+GGG 0.657222 2.4:-59230077 None:intergenic
TCCAAAATACAATAGCTGGA+GGG 0.657885 2.4:+59223298 MS.gene003322:CDS
ATATACTCGATACAAATGCA+TGG 0.660398 2.4:-59229174 None:intergenic
AATTCAGTGTCGGTATCATG+GGG 0.664130 2.4:+59225026 MS.gene003322:CDS
TAATGTATCAGGTGTCACAA+GGG 0.664692 2.4:-59230078 None:intergenic
TGTACAAAACTGCACACCGT+GGG 0.664793 2.4:-59223579 None:intergenic
GAATGTCTACTTGAGTACAA+GGG 0.664965 2.4:+59223194 MS.gene003322:CDS
ATGTATCAAAATCAGCACGA+GGG 0.675838 2.4:+59226344 MS.gene003322:CDS
TGTAAGGAGAAGGCTTTCGG+AGG 0.676430 2.4:-59220481 None:intergenic
TGATTCAGGATACGATAAGG+AGG 0.680285 2.4:+59230022 MS.gene003322:CDS
ATTCATATGGGGTATCTCTG+GGG 0.680868 2.4:+59222933 MS.gene003322:CDS
TTGATGGTGGGCAAATGATG+AGG 0.681489 2.4:+59223788 MS.gene003322:CDS
TTAGTAGAAGCTATGACACA+TGG 0.683511 2.4:+59226955 MS.gene003322:CDS
TGGAAGGGAAGAATGACGCA+AGG 0.683651 2.4:-59223818 None:intergenic
TATGTATCAAAATCAGCACG+AGG 0.689455 2.4:+59226343 MS.gene003322:CDS
ATTGTTAACCAATCAACAGA+CGG 0.689526 2.4:-59224982 None:intergenic
ACGACCTTGTCCAGAAACGA+CGG 0.694510 2.4:+59230161 MS.gene003322:CDS
AAACTCACCTCTGAAAGTAG+GGG 0.697905 2.4:+59225164 MS.gene003322:CDS
CTGGGCAGTTAACAGACATG+AGG 0.699064 2.4:+59229210 MS.gene003322:CDS
GTTCTTACTCAGATCCTCGG+TGG 0.699429 2.4:+59223102 MS.gene003322:intron
GATACGATAAGGAGGCTGTG+TGG 0.701209 2.4:+59230030 MS.gene003322:CDS
CTGTACAAAACTGCACACCG+TGG 0.712587 2.4:-59223580 None:intergenic
TTGTCACCAATAGTCCACCG+AGG 0.805282 2.4:-59223116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 59220196 59230316 59220196 ID=MS.gene003322
chr2.4 mRNA 59220196 59230316 59220196 ID=MS.gene003322.t1;Parent=MS.gene003322
chr2.4 exon 59220196 59220272 59220196 ID=MS.gene003322.t1.exon1;Parent=MS.gene003322.t1
chr2.4 CDS 59220196 59220272 59220196 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59220367 59220544 59220367 ID=MS.gene003322.t1.exon2;Parent=MS.gene003322.t1
chr2.4 CDS 59220367 59220544 59220367 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59220665 59220778 59220665 ID=MS.gene003322.t1.exon3;Parent=MS.gene003322.t1
chr2.4 CDS 59220665 59220778 59220665 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59221146 59221280 59221146 ID=MS.gene003322.t1.exon4;Parent=MS.gene003322.t1
chr2.4 CDS 59221146 59221280 59221146 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59221420 59221504 59221420 ID=MS.gene003322.t1.exon5;Parent=MS.gene003322.t1
chr2.4 CDS 59221420 59221504 59221420 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59221622 59221686 59221622 ID=MS.gene003322.t1.exon6;Parent=MS.gene003322.t1
chr2.4 CDS 59221622 59221686 59221622 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59222380 59222520 59222380 ID=MS.gene003322.t1.exon7;Parent=MS.gene003322.t1
chr2.4 CDS 59222380 59222520 59222380 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59222681 59222809 59222681 ID=MS.gene003322.t1.exon8;Parent=MS.gene003322.t1
chr2.4 CDS 59222681 59222809 59222681 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59222898 59223018 59222898 ID=MS.gene003322.t1.exon9;Parent=MS.gene003322.t1
chr2.4 CDS 59222898 59223018 59222898 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59223114 59223409 59223114 ID=MS.gene003322.t1.exon10;Parent=MS.gene003322.t1
chr2.4 CDS 59223114 59223409 59223114 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59223495 59223655 59223495 ID=MS.gene003322.t1.exon11;Parent=MS.gene003322.t1
chr2.4 CDS 59223495 59223655 59223495 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59223750 59223968 59223750 ID=MS.gene003322.t1.exon12;Parent=MS.gene003322.t1
chr2.4 CDS 59223750 59223968 59223750 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59224124 59224338 59224124 ID=MS.gene003322.t1.exon13;Parent=MS.gene003322.t1
chr2.4 CDS 59224124 59224338 59224124 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59224471 59224742 59224471 ID=MS.gene003322.t1.exon14;Parent=MS.gene003322.t1
chr2.4 CDS 59224471 59224742 59224471 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59224832 59225226 59224832 ID=MS.gene003322.t1.exon15;Parent=MS.gene003322.t1
chr2.4 CDS 59224832 59225226 59224832 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59225344 59225447 59225344 ID=MS.gene003322.t1.exon16;Parent=MS.gene003322.t1
chr2.4 CDS 59225344 59225447 59225344 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59225609 59225802 59225609 ID=MS.gene003322.t1.exon17;Parent=MS.gene003322.t1
chr2.4 CDS 59225609 59225802 59225609 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59226233 59226442 59226233 ID=MS.gene003322.t1.exon18;Parent=MS.gene003322.t1
chr2.4 CDS 59226233 59226442 59226233 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59226607 59227014 59226607 ID=MS.gene003322.t1.exon19;Parent=MS.gene003322.t1
chr2.4 CDS 59226607 59227014 59226607 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59229131 59229406 59229131 ID=MS.gene003322.t1.exon20;Parent=MS.gene003322.t1
chr2.4 CDS 59229131 59229406 59229131 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
chr2.4 exon 59229978 59230316 59229978 ID=MS.gene003322.t1.exon21;Parent=MS.gene003322.t1
chr2.4 CDS 59229978 59230316 59229978 ID=cds.MS.gene003322.t1;Parent=MS.gene003322.t1
Gene Sequence

>MS.gene003322

ATGGAGGAAGCTCTGATGGAAATGGATGACTATGATGAGCAGCAGATCAAGCCAAATGCACTTCCATTTGCTAGAAGGTTAGTTTTGTAAAACAAAACCCTTTTCATTGTAATGTTGATTGCTTGGGTTGATGTTTTGGGTTGTTGAGTTTTTGCTTTTTTGTGTGTATAGCTATCAGCTTGAAGCATTGGAAAAAGCGATCCGTGAAAATACCATAGTGTACTTGGAGACTGGTTCTGGAAAGACTTTGATAGCCATCATGCTTCTTCGAAGCTACGCTTATCACCTCCGAAAGCCTTCTCCTTACATTGCTGTGTTTTTGGTTCCCAAAGTTGTATTAGTTTCTCAAGTATGCTGCTGCTACTTTGATCTCTTTTATAATGACTTTGCATATTTGAGATACATTGTCTGGTGAATGAATGATTTCTATGTGATGATCAAGGATTCACCGTGCTTGTTTGTTTTGTAGCAAGCTAAAGCTTTGAGAAATCACACTGATTTGAAAATTGGAACGTATTGGGGAGATATGGGTGTTGATTACTGGGATGGAGATGTATGGAAAGGAGAAATAGAGAAACATGAGGTGAGGGGTCACTGCATTTCCCTATCCTTCTTATTTTATGTAATATTAATCTGGTTTGTAGAACCATAAACTATTTGTTTGTACTATGCAAATTCCAATAGAGCAAGAAATAGACAATTTTCTTTATTAACTTTGTTTATGTCCACATCGTCTTGTATTAAACAAACGCATACCTAATGAACCAACTAATATGGCTCCTTTTGGAATTCATTCCTTTAATGCCGTCTTGTATTCTGTTTTTCTAAGATTTTATTTGATTGACTTGAATATACTTGTATTCTGTTTTAGTAAGATGCTTCTGAATTTTATCTTTCGATGCTCTGTATATAACTGTAATTACTGTTGGTAATGCTTTTGAATATTACAGGTGCTTGTGATGACTCCTGCTATACTGCTTTCTTGCTTGAGGCACAGCTTTATCAAACTGTCAATGATAAAGGTTTTAATTATGGATGAATGCCACCATGCTGCGGGTAGACACCCATATGCTTGTATAATGACTGTAAGTCTTATACTCTTTAGACACCTATAATAACATAGCGGAATTCGAACAAATTGATATTGTTTGACGAAATACTATTTAGTACAAATTGTTGCCAAATTGTTTGAAGTGGTAGTTACTTTTGTCTGATTATGTGCAGGAATTTTATCATCATCAATTGAGATCTGGTATCACTGAGCTTCCTCGGATTTTTGGGATGACTGCATCCCCAATTAAGTCGAAAGGTATACAAGCCAAGAGAAAAATTCTATTAATTTCTTGTTTTTCCCTGCTTATCTATCATTGTCGATTATTCTCTCATGCTCAATTTCATTTTTCTTCACTTTTATTTTTTAACACAGCTGCGAATTCTGAATCAACCTTGTCCAAATCTATTCGGGAACTAATGACTCTAATGCATTCAAAGGTTGTTTTTATTTTCTTCCTCTCTATGTACAATTTTTTCTTACTCTTTATATGCATTTATTATGTTCAGTGGCAATACTTTATCCCCTTATCTTCTTTGTGAATATCACCATAAGAAAATACATTACAGAGCCTATGATAGGGCCTACTGTTATGCATGGATGCTCAAGTGAAAGGTTTTCTTATGTAAAGATGTAACCAAAAGATAATGAAATGATATATTTTCTTAGTTGTTATTTTATTTGCCTTTTTTTAGTTGTTATGCATGGATGCTCAAGTGAAAGGTTTTCTTATGTAAAGATGCAACCGAAAAATATTTAATGATATAATATTATCTTAGTTGTTATTTTATTTGCCTTTTGTTAGTTATTTCTAGTAGTTATTTCCTTAGTTTATTCCTGTAAAAATATGTAAAACTCTGTGCAAATCTGTGTCTATAATGAGACCACACACCTTGTATTTATAATGGTTTTACAATAAAGTGCATTGAATGCTTAATGAGTAAGCGAAGTTGTATATTCTAGGGGTAATAACAATCAATCTAGGAAGTTGTACAATTAAAGGAATTTCTTAAGATTCTTAATTTTAACTATTCCTTTGCGAGTATTACTCTTTTGTTTCGAAGTACAACTCAATATTAGTGTTTGGTCTTGCCATGTTTTATTTCTCTAATATTTTTGTTTTTGAATTGAAGGTTTATACATGCGTATGCGATGCTGTCATCTCACAGTTCATACCAACATCTACTCCAAAATTCCGGTTTTACAGGGACAATGGGATTTCATATACGCTATTCGAAGAATTAGCCAAAAGGCTTAACGAATTAAAAAAACAGGTGTGTACATTTAAGCAAATCGTTAATGTTCAGATATATAGTTTAAATTAAACAGAAATTTCTCTTCATGTTATGTCACTGACTCCAAATTCTAGTTGTGCATATTTTTGTCCAATCTTAATTGATTGTTTCCTTGAAATGGGTGTATTCTGTTTTTCAGCACGAGCGTTACATCACAAGTTCAGATTTGACTAAATCAGCTGTCCAATCTGCTTACAAAAAAATTGCAAGGATTTTTGATGCCTCAATTTTTTGCTTAGAAGAGCTTGGTATTTGGTTGGCTTTGAAGGTTCTTGCCCTTCTGCTACAGTGACTTTATGTGTGACTCTATTTATGTTCATGTCTGCTTAATTGACATCAACTGTTTTTTGTGATAGGCTGCGGAGTCCTTATCTTCCATTGAAATTGAAACATTCATATGGGGTATCTCTGGGGATCAGATTGTTAAAAAATTTAGTTCAACTACTATGATGACACTGCAAAGTTGCATACCATCTGGTAATAATTCTACAAGCATTGAGAAAATACATGAAATTTTACTTAAATCTTTTGTTTGCATTCTTCTATTAATTTTTAAAAATGTTCTTACTCAGATCCTCGGTGGACTATTGGTGACAATATGAAATTCAATTTGGAAATGGGGCTATTGACCTCCAAAGTATGCTGTCTTATTGAATGTCTACTTGAGTACAAGGGTTTAACTGAAATGAGATGCATAGTTTTTGTGGAAAGGGTCATTGCAGCTATTGTCCTTGAGGTTCTATTGAACGCTTTGCTTCCAAAATACAATAGCTGGAGGGCTAAATACATTGCAGGAACCGGTAGTAAACTGCAAAACCAAACTAGAAAAATTCAAAATGAGATTGTGGAAGAATTTCGTAAGGGATTGGTATGCTGCTTTCTTCGATAATCCCTCTGTATTGTAATATAGCAAAGACAATTATTACTTATTACGGAAATATTTTAATCTGTAGGTCAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATCTGGTTATTAGATTTGACCCATCTCCCACGGTGTGCAGTTTTGTACAGTCCCGAGGCCGTGCCAGAATGCGAAATTCAGATTACATATTGATGGTAAAAAGGTAATTATTGTGTTATTCTCCTTAGTATTGTGATTTCTAAATGTTCTGAAGTAAATTCTCCACAAAACATCTTTATTTTGTTCCAAAATTACAGCGGCGATGCAGTTACACGTTCTCGATTAGAGAAATACCTTGATGGTGGGCAAATGATGAGGAAGGAGTCCTTGCGTCATTCTTCCCTTCCATGTGAGAGTCTTGAAAGTGATCGATTTAACGAGCAAGCTTACCGAGTTGCAAGCACTGAAGCTGTTGTTAATCTTAGTTCCAGCATTACTTTGATATACTTATATTGCTCCCGTCTCCCTTCAGATGGGTTAGTTTGTCTATTGATGCCCTCATTCCATATTAATTTTTCTTTGATTAATAATAATAATGAACCTTAAGATATGCTTCTTTTGCATTAATCTGGTCCTCTTCAATTTTTTATCCCAATCTTCATTATTCACCTCAATGGGTTTAAACTCTCAGGTACTTTAAACCGACTCCGATGTGGGACAAACAAAAAGGAATATTATATCTTCCTAAGAGTTGTCCTATACAGCCTATTCATGTACAAGGTGATACAAAGTTCTTAAAGAATATTGCATGCCTTGAAGCATGCAAACAACTTCATAAGATTGGAGCGTTGACAGATAATCTTGTTCCTTCTATTGTCGTTGAAGAAGCAGAGGTGGAGGAATTTGGTAACTTCTCGTGCCTTCTATTCATTTTGCTTTTATTATTGCCTTTCATTTTTCACACTACTTGAATGTAGAATTCTATTTAACCATATAAGAATTCTCTGAATGACATTGACATCAAACAAAATCTTACAGGGAAAGAACCATATTCCGAAGAACAACCAAGTTATGTTCCATTTGAATTGGTGAATCAAGTGACGAACAGTAGTAACACAATCTACTATTGTTATTTAATAGAGCTAAAACAAAATTTTAGCTATGACATCACTGTGCAAGACATTTTTCTCGCAACTAGAGTCAAGCTTGATCCAGAAATTGGATGCATGCAATTTGACATGTGTTTCGACAGAGGTAGTCTGGCCGTAAACTTGAGATACATAGGAAACATTAATCTCTCACCAGATCAGGTATCTCTCAAGTATTTCTTTAATTGTATCAGACATATTTGCGAGTGTTGGGATAAGTCAAGACAATTATGATTTGTTTTCTTTTCCAGGTTCTTCTGTGTAAAAGATTCCAAGTTAGTATCCTTGGAATTCTTATGAATCGTAAAATGGATAAAGAAAATCTTTCAGAAAAATTCTCTCTGGAAGATGATCTTGAGATAGATTATCTCCTGCTGCCGTCTATTGCTATAGAGGAAACACCGTCTGTTGATTGGTTAACAATCAGTTCCATACATCCATCTACAATTCAGTGTCGGTATCATGGGGCCAAGATATTGACTGAGAAGGGTTTCGTTTGTGGCTGCATATTGCGAAATGCTTTGATTTGCACTCCTCATAATGGTCGTACTTACATCACCACTGATATGATGGAATTGGACGGAAACTCACCTCTGAAAGTAGGGGATGGTGAAGTTACTACATATAAGAAGTACTTTGGACAGAAGTAAGTTAATTTTTGTGGTAGATGTTTACTCTCAAGTTAATTTATCAACTCTGGTATTATCCGGTCAATTTATCTATTTTGGTGCATTATTTTAATTTATCCTTTTCCGAGTTTCAGGCATGGCATTCAATTGCGTTTTGAACATCAACGCCTACTTAAGGCAAGACACGTTTTTCCAGTAAAAAATTATTGTCATGGATATAAACAAGCGAAGGACAGAGGTTTGAGCTTTGAATTTTTTAAATGTTTTTTCCGGTACTTTAATCTTTCCTTAGTGGTGTCCATAAAAGCTCGGAAGATTTAGTTTCTTCTGTTGTCGCTGTCCAAATACTAATACTATTAATGTGTATTCTGATCTTAATCCCGTGTTTTTCTTTTTCAGATGTGAGCAAGACCTTTGTTGAATTACCTCCTGAACTCTGCTCTATAATCATGTCACCAGTACCACTTAGCACGCTTTATACATTTTCATTTATTCCATCGATCATGCATAGACTTGAGTCGTTGCTTGGTGCTTATAACTTTAAAAAGATGCATTTGGATTATTGCCCACAAAACAAGATTCAAACATTCAAGGTGGGCTAGTTTTTTATTTCTAGTTGTTTTTTTTTTTTTTTTTTTTTTCAAATAAAGAATTCTGTATCTATCTATTGATTGTCCTTAATAGCTAAAAATTTGTAGAGTAAACAGATTTTTTTTCCTGCATTTTTCTCTTACAATAATTTGTTAATAATGGAAGTGGTTCTGAAACAAAAGTTGTAGTAGAAAACACTGAACTCTGGACTTTGAATGAAGGTAAAGAGTTCATTCTGCTCTACTTTTATTCACCACTGCCTTGGCTAATACACATTGCATATATTGAGAAGACACTTGGTTTGGTACTTCCTCCGCTTGCATTTTTTGGTTAATTTGTCTTGGTGGTATCTGAATGTGCGATTTTCTTGTATGTTGTCAAACATTTTAAAGATATTTGCACTGATGATGGTATCTGCATTTTGCATTTTAGGTCTTGGAAGCAATGACCACAAAGTCATGCAAGGAGACCTTTCATTATGAGTCACTAGAGACACTTGGAGATTCTTTTTTAAAATATGCTGTTAGCCAACAGCTCTTTAATATGTATCAAAATCAGCACGAGGGTCTTCTTAGTGTGAAGAGGGAGAAGATCATTTGTAATGCTGCCCTCTCTAAGTTAGGTTGCAATTTTAGACTTCCGGTATTCTTTCTCTCCCTCTCTTTCATATGTTATTCTTCAATCTTTTATGCTTTACATCTCTTATGTTGTATCATTTGGCTATTCATTCTGTCTTATTATTGAAACTGAACTTGTGGATAATAATATTAGTTATGTTATTGATTATCTATTCTTCTGAGTTGCAGGGCTTCATACGGAATGACCCTTTTGATCCGAAGACCTGGATCATTCCTGGAGCTAAATCAGGAAGTTTTAAATTAGAAGAGACAGTTTTCAATGGGAGAAAAATATATACTCGCGGAGATAGAAAATTGAAACGGAAAGTTGTTGCTGATGTTGTCGAAGCACTAATTGGTGCATTCCTTAGCGCTGGTGGCGAGATGGCTGCATTGTTGTTTATGGATTGGATTGGGATCAAAGTGAATTTTAATATCAATCCATATGAGAGGCAATTCATTGCTTGTCCCGACAATCTAGTTAATGTCAGATTTCTAGAATCCCTATTGAAGTATTCGTTCAGGGATCGTTCTCTATTAGTAGAAGCTATGACACATGGCTCTTATATGCTTCCTGAAGTGCCTAGATGCTACCAGGTACGTACTATTGTGTTAGATATCTTATTAAAATTGTGTCAGTTTTATTATAATTATAGTAGTTAATTATGCAGTTATGGTTTATTAATATATTATGATTAATAATTAATTAAGTCAGTAGTGGGAGGTTAAGTTTTAAGAATAAATAGGGGAGAGAAGGGAAGATTGAGGGGCATCTGAGGATTTGACTGGGAAGGGGCCATTTTGGCATTAGGGAGGTGCAGACCCTCGAAGTTCTGCAATATTATTCTGTAATCAAAAGGGATTTTCCCTATTTTATTCTTCTATATCAGTTGGTTCCTATCAACTGGTATCAGAGCAGTTCTGATCCGGGGCAATAAATTCACAGTTGGGGAAAATGGACATGCCACGATTTGACGGTAGCGGTGACGCTTATTGGTGGTTGATTTGTATTGAGAAACATTTTGATGTCGTGGGAATACAGGAGGGTGAGAAGTTGCTGGAGGCGGTGAAAGCCTTGCGAAACCGTGCTCTCGTATGGTGGCAGTGGTGGAGTCGATGCCATCTACATGCGAGTTGGCGAGCGTTTCACGTTGCATTCATTTGGCATTTTAAGCCAGTGTATAGAGACCTTCTACCTATATCGGATGAAGAAGAGGAATCTGGATTGGAATGGGAGTCGTCGACGCCTCACACATTCAGCCTTCAATCAGAAGAAACTGATCAAGGAAATTCTGAACTCATTCAGACAGCAGAAGAGGAAAAGGTAGAGAACGCAGAAGAAAGGGATGCAGAAAATTCCTCCGTGAATGTCATCATTGTGGAAAAGCAACAAGAGACCAAAGCAGATCTGCGCAAATTTCTTGGTATCGACAGATTCTTTTATGAACATGGTATGAGTAGTGTGTTCGAATCGAGGGCGAAATTGCCTAGAAAAACTATCGGAGAGGGATGGGTTTCACTCGAGTTGGGCGGCCTACCTCCACCGCCGCCAAAGCCGCCAGATCCAGACGTGTTTGTGGTGAAGAGTGGATTATCCACTGGTTTGATCGAACTGGCACTGTGCCTATTGCTGCCAAAAATTCCTCTCCAAAAGAGTGTCTGATGCATGCATTAGTTATCATGTTTCACACTTTCCTCTGTCACTCTACTTCAAGTTATGGGGACCTGGTGGACACTTATGTTCACCTTGAGGACAAGGTGAATCTTTAGGGGGGGAGTATTGTTAGTAATAGGACTCCTAAGGGCAGCAGTTATAGAATAATAGTAGTTTATTTAATAATATTATAAATAAGTAACTGTTACTTGTGTGTAGTAATTGCTGTCTACTAAACTTCTATGTAACAGCTATAGGACTTGGTATTATAAATAAGATGCAGAGGAAAATAAAGGTATTCAGGGATTGGTAGGGAGAGACCAAGCTCTCGAATACTTGGAATGGAGAGAACCAAGACTCTCGAATTTCTTGGGATTATATTGTAATCTTACTATTAGTTTATATTTTGATATCAGTTCCTATCAACTGGGAGAGACCAAGCTCTCGAATACTTGGAGTGGAAAGAACCAAGACTCTCGAATTTCTTGGGATTATATTGTAATCTTACTATTAGTTTATATTTTGATATCAGTTTCTATCATATTGTTATTATTCTTAGTATGGAAACAAGACATTAGCAGATATGTATCAATGTAAGACAAAGATTTCTTCAACTTAATACTGATTAGCTTACATTTTTTCAAGTCTTGATGGTCCTTTTTAAATATTAATCATTCACAATTTTCTTCATGATTAATTATGTTTTCCTCTTAGGGTCAGTTTGGATTGGTTTATATGAGCATATCTACTGGCAAAAACACTTTTAAGATTGTTTATGAGAGCTTATGGAAACAACTTATGACATGGTCATAAGTTGTTTTCAGCTTATTTGCATAATCTCTCCAGGATAGCTTATGAAAGCAGCTTATAGCATATACATAAATAGTTTCACTTTATTATTTCTTTTGTTATAGAAATAGTTTTTACATAAGTACTTGTATGATAAAAGTTTATGATGTAAGCGCTTAATTAAGTTGTTTATCTGAATGTGGCCTTTTTCGTGTTACTTATGTTTTTCTTTTGTCTCACTTTTTGTATGATATATTCCTTTTCCTGCAGCGACTTGAATACTTGGGAGACTCGGTGCTGGACTATCTCATTACCATGCATTTGTATCGAGTATATCCTGGCATGTCACCTGGGCAGTTAACAGACATGAGGTCTGCATCGGTGAATAATGACTGTTATGCAATGTCTGCCATTAAGGTTCAATTGCATAAGCATGTCCTTCATGCCTCTCAAGAGCTACATAAACATATTGAAGCTACGCTTGATAAATTTGACGGTCAGTCTTCATCAAGTTTTGGATGGGAATCCGATGCTACATTCCCCAAGGTTAGTTTGTCAAAATCTTTGAATAATGTTATTACTGTCAAATTAGTGTTTTAACACTACAAAGTGAGGTTTTCTATAAAATGTACAAATTCATGTTTATCCTTAAATTTGTGCATCCTTAGAGAAGATACCACCGCTATGGAACACAAACTGCATTTATGCTTTTGTTTTTAGTTTGATCTGTGCTATTTGGTATGGAAGTTTTTCTATTGAGGCTGTTATGAGTACCTAAACTTTACTGGTCCGGTCCGGTGATTGTGATCAAAATATGATTTGTTTACACGTGTAATCTATGTAGCGCCGACATGTGATTATATTCAATTACTTCATTTCTCAATTTATTATCGATGTGTGTTGTGTACTGTCTGGTGTTCATATCTGTGTTAGTGTTTCATGGATTGTAATAGCTTTGCCTACTTTTTTAGGGTCATTAGTTCTTTTGATACATAAGGTAGAGATGTAAATGTTATTGGTGCGTTTTTCTACTTTGTGACTGTGATGACCACTAGAATGTGGAAACTGTTACAACACCAATTGTAACACCAATTAAGAACGTTCCTATTGTTTGCAGGTACTTGGAGACATCATAGAGTCTCTAGCTGGTGCTATATTTGTTGATTCAGGATACGATAAGGAGGCTGTGTGGAAAAGCATAAGGCCTCTTTTGGAGCCCCTTGTGACACCTGATACATTAACGATCCATCCGATTAGAGAATTAAATGAACTGTGCCAAAAAATGAATTATACTAAGGAGACGACCTTGTCCAGAAACGACGGCGTTACGAGCTGTAAAATTGAGGTAATTGCGGATGGGGTAATTCATGAGTTCGAGTACAAAGGTTCTACCGACAAGAAAACTGCCACAAGACTAGCCTGCAAGGGAGTTTTGCATTCCTTGCAATTGAAGTAA
Protein sequence

>MS.gene003322.t1

MEEALMEMDDYDEQQIKPNALPFARSYQLEALEKAIRENTIVYLETGSGKTLIAIMLLRSYAYHLRKPSPYIAVFLVPKVVLVSQQAKALRNHTDLKIGTYWGDMGVDYWDGDVWKGEIEKHEVLVMTPAILLSCLRHSFIKLSMIKVLIMDECHHAAGRHPYACIMTEFYHHQLRSGITELPRIFGMTASPIKSKAANSESTLSKSIRELMTLMHSKVYTCVCDAVISQFIPTSTPKFRFYRDNGISYTLFEELAKRLNELKKQHERYITSSDLTKSAVQSAYKKIARIFDASIFCLEELGIWLALKAAESLSSIEIETFIWGISGDQIVKKFSSTTMMTLQSCIPSDPRWTIGDNMKFNLEMGLLTSKVCCLIECLLEYKGLTEMRCIVFVERVIAAIVLEVLLNALLPKYNSWRAKYIAGTGSKLQNQTRKIQNEIVEEFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMRNSDYILMVKSGDAVTRSRLEKYLDGGQMMRKESLRHSSLPCESLESDRFNEQAYRVASTEAVVNLSSSITLIYLYCSRLPSDGYFKPTPMWDKQKGILYLPKSCPIQPIHVQGDTKFLKNIACLEACKQLHKIGALTDNLVPSIVVEEAEVEEFGKEPYSEEQPSYVPFELVNQVTNSSNTIYYCYLIELKQNFSYDITVQDIFLATRVKLDPEIGCMQFDMCFDRGSLAVNLRYIGNINLSPDQVLLCKRFQVSILGILMNRKMDKENLSEKFSLEDDLEIDYLLLPSIAIEETPSVDWLTISSIHPSTIQCRYHGAKILTEKGFVCGCILRNALICTPHNGRTYITTDMMELDGNSPLKVGDGEVTTYKKYFGQKHGIQLRFEHQRLLKARHVFPVKNYCHGYKQAKDRDVSKTFVELPPELCSIIMSPVPLSTLYTFSFIPSIMHRLESLLGAYNFKKMHLDYCPQNKIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYAVSQQLFNMYQNQHEGLLSVKREKIICNAALSKLGCNFRLPGFIRNDPFDPKTWIIPGAKSGSFKLEETVFNGRKIYTRGDRKLKRKVVADVVEALIGAFLSAGGEMAALLFMDWIGIKVNFNINPYERQFIACPDNLVNVRFLESLLKYSFRDRSLLVEAMTHGSYMLPEVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHASQELHKHIEATLDKFDGQSSSSFGWESDATFPKVLGDIIESLAGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQKMNYTKETTLSRNDGVTSCKIEVIADGVIHEFEYKGSTDKKTATRLACKGVLHSLQLK