AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05453

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05453.t1 MTR_6g477980 93.643 991 50 5 88 1067 127 1115 0.0 1838
MS.gene05453.t1 MTR_6g477980 93.643 991 50 5 88 1067 121 1109 0.0 1836
MS.gene05453.t1 MTR_1g102630 74.886 880 208 4 194 1067 106 978 0.0 1381
MS.gene05453.t1 MTR_1g041345 73.625 891 216 6 184 1067 101 979 0.0 1371
MS.gene05453.t1 MTR_2g059590 67.312 878 264 4 195 1067 44 903 0.0 1236
MS.gene05453.t1 MTR_4g113200 63.056 877 301 3 196 1067 18 876 0.0 1176
MS.gene05453.t1 MTR_4g056430 55.816 937 370 12 147 1067 63 971 0.0 1031
MS.gene05453.t1 MTR_4g056470 52.174 1012 413 18 91 1067 33 1008 0.0 966
MS.gene05453.t1 MTR_2g059790 70.930 602 157 3 466 1067 11 594 0.0 904
MS.gene05453.t1 MTR_2g059590 64.264 652 227 2 195 841 44 694 0.0 882
MS.gene05453.t1 MTR_5g042590 41.430 881 448 22 219 1067 172 1016 0.0 607
MS.gene05453.t1 MTR_3g078647 37.137 929 477 27 191 1066 48 922 9.44e-170 523
MS.gene05453.t1 MTR_5g087870 35.590 916 485 25 205 1066 83 947 1.33e-156 489
MS.gene05453.t1 MTR_3g083300 35.526 912 495 23 205 1067 42 909 3.94e-153 479
MS.gene05453.t1 MTR_5g087890 34.725 910 485 24 205 1066 43 891 3.03e-151 473
MS.gene05453.t1 MTR_3g010650 34.430 912 491 23 205 1067 23 876 6.21e-151 472
MS.gene05453.t1 MTR_6g043180 34.273 922 485 27 205 1066 42 902 1.49e-150 472
MS.gene05453.t1 MTR_5g087870 34.536 915 474 25 205 1066 83 925 9.41e-146 460
MS.gene05453.t1 MTR_4g083610 32.930 908 535 29 145 1018 64 931 7.14e-137 438
MS.gene05453.t1 MTR_2g028910 32.760 931 531 30 122 1017 116 986 8.77e-128 415
MS.gene05453.t1 MTR_3g101730 55.319 235 43 5 719 953 2 174 1.25e-72 239
MS.gene05453.t1 MTR_7g067050 81.053 95 13 1 613 707 1 90 2.76e-49 169
MS.gene05453.t1 MTR_6g037320 95.946 74 3 0 732 805 1 74 3.24e-40 144
MS.gene05453.t1 MTR_3g076870 63.095 84 28 2 202 284 70 151 7.92e-22 93.6
MS.gene05453.t1 MTR_1g038380 33.333 198 110 6 720 915 250 427 2.00e-19 92.8
MS.gene05453.t1 MTR_3g467060 63.636 55 18 1 232 284 104 158 8.86e-12 64.7
MS.gene05453.t1 MTR_3g076680 57.895 57 23 1 201 256 164 220 3.49e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05453.t1 AT1G48410 80.276 943 168 6 135 1067 114 1048 0.0 1555
MS.gene05453.t1 AT1G48410 80.106 945 168 7 135 1067 114 1050 0.0 1551
MS.gene05453.t1 AT1G48410 80.106 945 168 7 135 1067 114 1050 0.0 1551
MS.gene05453.t1 AT5G43810 74.142 874 205 4 202 1067 128 988 0.0 1363
MS.gene05453.t1 AT5G43810 74.142 874 205 4 202 1067 128 988 0.0 1363
MS.gene05453.t1 AT5G43810 74.142 874 205 4 202 1067 128 988 0.0 1363
MS.gene05453.t1 AT5G43810 74.142 874 205 4 202 1067 128 988 0.0 1363
MS.gene05453.t1 AT2G27880 56.344 930 364 13 154 1067 94 997 0.0 1036
MS.gene05453.t1 AT1G69440 38.402 901 445 24 209 1067 158 990 0.0 566
MS.gene05453.t1 AT5G21150 35.761 920 489 25 197 1067 30 896 2.28e-168 518
MS.gene05453.t1 AT2G27040 35.699 930 488 25 195 1067 48 924 1.68e-167 517
MS.gene05453.t1 AT2G27040 35.699 930 488 25 195 1067 48 924 1.68e-167 517
MS.gene05453.t1 AT2G32940 37.009 916 458 23 205 1067 29 878 6.38e-156 485
MS.gene05453.t1 AT5G21030 34.919 925 485 23 188 1067 2 854 4.30e-151 472
MS.gene05453.t1 AT5G21030 34.811 925 482 24 188 1067 2 850 3.41e-148 464
MS.gene05453.t1 AT1G31280 33.404 940 531 26 110 1021 100 972 3.58e-144 458
MS.gene05453.t1 AT1G31290 33.871 868 509 24 190 1025 248 1082 5.78e-132 429
MS.gene05453.t1 AT1G31290 33.871 868 509 24 190 1025 286 1120 1.02e-131 429
MS.gene05453.t1 AT1G31290 33.871 868 509 24 190 1025 322 1156 2.03e-131 429

Find 352 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCCTCTCATTAAGTCTTT+TGG 0.204513 6.4:+58220960 None:intergenic
TTGAAGTCCTTTGAAATAAA+AGG 0.226884 6.4:+58222632 None:intergenic
ACCTCCATTGGGAGGTAATT+AGG 0.229601 6.4:+58221098 None:intergenic
GACTGAAGTGGAACAGGATT+TGG 0.259106 6.4:-58223049 MS.gene05453:CDS
GATATGCAGGTGACCTTAAA+AGG 0.260896 6.4:-58219298 MS.gene05453:intron
TTGCAGCCATGCTGGTATTC+AGG 0.262891 6.4:-58217555 MS.gene05453:intron
CCAGCATACTTGGTAATTTC+AGG 0.265087 6.4:+58218905 None:intergenic
TTGTTACCCAGTTGCTTAAC+AGG 0.271495 6.4:-58221996 MS.gene05453:CDS
GATAATAATGGCTCTCTTTA+CGG 0.275727 6.4:-58219777 MS.gene05453:intron
ATGCACATTTGGCTGCATTC+AGG 0.279129 6.4:-58216859 MS.gene05453:CDS
GTTCAAAGTTGTGATTAAAT+TGG 0.300544 6.4:-58222476 MS.gene05453:CDS
GGGATGCCCCAACAACAGTA+TGG 0.308798 6.4:-58223369 MS.gene05453:CDS
CCCAGCCTATTATGCACATT+TGG 0.310198 6.4:-58216870 MS.gene05453:CDS
ACCTAGATCAGGTAAATAAA+AGG 0.322431 6.4:+58222235 None:intergenic
GTTATATTGCCCGATAATAA+TGG 0.326147 6.4:-58219789 MS.gene05453:CDS
CTTAGTGATGATTTGCTTTG+AGG 0.334218 6.4:+58222988 None:intergenic
GGGGTTGCTTGGTGCAGCTC+GGG 0.337072 6.4:+58223159 None:intergenic
GCCCAGATGTGTTATATATC+TGG 0.341271 6.4:-58220033 MS.gene05453:CDS
AGGGGTTAACCGTGCTGTTA+TGG 0.352215 6.4:-58222747 MS.gene05453:CDS
CTACCTCTTCCTTGATAGTC+TGG 0.357715 6.4:+58223309 None:intergenic
AGGTCAACCTCTTTGTCTTT+AGG 0.358795 6.4:+58219819 None:intergenic
TTCTAAGAACTTTCTCTACT+TGG 0.368378 6.4:+58219871 None:intergenic
TTCCTAATGACAGATCAAAA+AGG 0.370484 6.4:-58221420 MS.gene05453:intron
GCTCATCTTAAATACATGTT+TGG 0.374059 6.4:+58219232 None:intergenic
AGAGACAGAACGGGTGCATC+TGG 0.375162 6.4:+58216997 None:intergenic
CAAGGTGGACGAGGTGCTTA+TGG 0.377423 6.4:-58223414 MS.gene05453:CDS
GATCCCTATGCTGAAGAGTT+TGG 0.378426 6.4:-58220525 MS.gene05453:CDS
AGGGGTTGCTTGGTGCAGCT+CGG 0.383456 6.4:+58223158 None:intergenic
ATACTCCACAACAGACTTCA+TGG 0.383967 6.4:+58221193 None:intergenic
TGCCAGATATATAACACATC+TGG 0.384571 6.4:+58220031 None:intergenic
TGAAAATCAATGTGAAGGTT+GGG 0.390131 6.4:-58219184 MS.gene05453:CDS
GTGCAACAGCAAGGCGGCCG+TGG 0.392957 6.4:-58223279 MS.gene05453:CDS
GGTGGTGGACGTGGTGGACG+TGG 0.393970 6.4:-58223390 MS.gene05453:CDS
AGACATCCCTGTTAAGCAAC+TGG 0.394801 6.4:+58221989 None:intergenic
GATGGGCTTGAATCCTCTCC+AGG 0.395893 6.4:+58219062 None:intergenic
TTTCCCCTTCGGCCCGGAAA+AGG 0.395901 6.4:-58222964 MS.gene05453:CDS
CAGAGGGTACAGGGGTTGCT+TGG 0.397104 6.4:+58223148 None:intergenic
ACTCTTGTCATAGTGGTTAC+TGG 0.399422 6.4:+58217756 None:intergenic
GCCTCAGAATGGGGTGCAGC+TGG 0.402329 6.4:+58223096 None:intergenic
ATTTACCTGATCTAGGTAGA+AGG 0.403360 6.4:-58222229 MS.gene05453:CDS
GAGCTCTTGGCGATGTGCTT+GGG 0.405098 6.4:+58218871 None:intergenic
GGCGGCCGTGGGTACGGTGG+TGG 0.406969 6.4:-58223267 MS.gene05453:CDS
ATGAGAACATTTACCTCCAT+TGG 0.407114 6.4:+58221086 None:intergenic
AGGAGAAAATACCGCATTGC+TGG 0.407212 6.4:-58221353 MS.gene05453:CDS
TGCAGCCAAATGTGCATAAT+AGG 0.408468 6.4:+58216865 None:intergenic
TCATATTCCACTGGCCAACT+TGG 0.409112 6.4:+58220317 None:intergenic
GAGTATTTCTTTGAGACATA+TGG 0.411108 6.4:-58221176 MS.gene05453:CDS
TACTGATGAAGATCCTTCTT+AGG 0.411437 6.4:+58222889 None:intergenic
CAACAGCAAGCTGCTGTAAC+CGG 0.415148 6.4:-58223492 MS.gene05453:CDS
TGAGCTCTTGGCGATGTGCT+TGG 0.415417 6.4:+58218870 None:intergenic
TTGCCTTGGTGGGGCTCCAT+AGG 0.415967 6.4:+58223191 None:intergenic
ATAAGCACCTCGTCCACCTT+GGG 0.416102 6.4:+58223416 None:intergenic
ATATCTTTCCGTAGAGCTAC+TGG 0.416747 6.4:-58218510 MS.gene05453:CDS
CTCTTACGGCCGTCGTAAGC+AGG 0.418250 6.4:+58222677 None:intergenic
TTCGGAACCTTCAGCACCAC+TGG 0.418645 6.4:+58223539 None:intergenic
CATTGTCCTTCAGTGCAGGC+AGG 0.418887 6.4:+58216705 None:intergenic
GGTATGAAGGTTGCCTTGGT+GGG 0.419226 6.4:+58223181 None:intergenic
CGTGGGTACGGTGGTGGAAG+AGG 0.420099 6.4:-58223261 MS.gene05453:CDS
ACTGAAGTGGAACAGGATTT+GGG 0.420902 6.4:-58223048 MS.gene05453:CDS
ACGTGCTGACCTTCACCACC+TGG 0.423839 6.4:-58222449 MS.gene05453:CDS
GGGTATGAAGGTTGCCTTGG+TGG 0.425137 6.4:+58223180 None:intergenic
GTAAAGAGAGCCATTATTAT+CGG 0.426028 6.4:+58219779 None:intergenic
TGCACATTTGGCTGCATTCA+GGG 0.426179 6.4:-58216858 MS.gene05453:CDS
AAACTTACAGCTGCTATTGA+TGG 0.426976 6.4:+58219044 None:intergenic
GCTGCTGTAACCGGTGCTGC+TGG 0.427274 6.4:-58223483 MS.gene05453:CDS
CTTTGTTGAGTTGCCTAAGA+AGG 0.427787 6.4:-58222902 MS.gene05453:CDS
TTCTATCTTTGCAGCCATGC+TGG 0.428412 6.4:-58217563 MS.gene05453:CDS
AATTACCAAGTATGCTGGTC+TGG 0.428808 6.4:-58218900 MS.gene05453:CDS
TAGGCAACTCAACAAAGAAA+TGG 0.429700 6.4:+58222908 None:intergenic
TCGCATCCTTCCTGCACCTT+GGG 0.430283 6.4:-58220466 MS.gene05453:intron
CTTGAGGTCCTCCGCCTCCC+TGG 0.430885 6.4:+58223457 None:intergenic
GCAGCCTTCAGGCGAGGGAT+TGG 0.435188 6.4:-58222207 MS.gene05453:CDS
GCAGTAATGGCAGGAACTAC+TGG 0.435571 6.4:+58219903 None:intergenic
CAGCTCAAATATAATGATAC+AGG 0.436974 6.4:-58220361 MS.gene05453:CDS
GATGATTTGCTTTGAGGAGG+AGG 0.439079 6.4:+58222994 None:intergenic
CGGCCGCCTTGCTGTTGCAC+AGG 0.440154 6.4:+58223282 None:intergenic
CTAGGTAGAAGGCAGCCTTC+AGG 0.440354 6.4:-58222218 MS.gene05453:CDS
GCTGTTTCTCGTGGTGGAGC+GGG 0.440740 6.4:-58216782 MS.gene05453:CDS
GCCAAATGTGCATAATAGGC+TGG 0.440934 6.4:+58216869 None:intergenic
AACCGGTGCTGCTGGATACC+AGG 0.444371 6.4:-58223475 MS.gene05453:CDS
TCCGGGAGCTTCCTACCTCC+AGG 0.444651 6.4:-58222360 MS.gene05453:intron
TGGTATGGAGCAGAGGGTAC+AGG 0.446065 6.4:+58223138 None:intergenic
AGGTTCTTGACATTGTTCTC+CGG 0.446529 6.4:-58222378 MS.gene05453:CDS
AGAACTTTCTCTACTTGGTC+AGG 0.446955 6.4:+58219876 None:intergenic
AGAAGTGACTGAAGTGGAAC+AGG 0.447307 6.4:-58223055 MS.gene05453:CDS
GATTTGCTTTGAGGAGGAGG+AGG 0.448375 6.4:+58222997 None:intergenic
TACTACTCACGTTAATTCTC+TGG 0.450345 6.4:+58221313 None:intergenic
AGGTTGTTGCTTCTCAAGAC+TGG 0.451513 6.4:-58218928 MS.gene05453:CDS
CCGGTCAATGTCCCTCTGAC+TGG 0.452281 6.4:+58218818 None:intergenic
CAGTGGCCTTGTTTGCAAGT+TGG 0.453894 6.4:-58221134 MS.gene05453:CDS
CAGCAAGGCGGCCGTGGGTA+CGG 0.454131 6.4:-58223273 MS.gene05453:CDS
TTCCCCTTCGGCCCGGAAAA+GGG 0.455900 6.4:-58222963 MS.gene05453:CDS
CTCGCATCCTTCCTGCACCT+TGG 0.457876 6.4:-58220467 MS.gene05453:CDS
CCAAATGTGCATAATAGGCT+GGG 0.457940 6.4:+58216870 None:intergenic
GGGGCTGATAGTTGGGTTCA+AGG 0.458500 6.4:+58217827 None:intergenic
ACAAACCAGACCAGCATACT+TGG 0.463102 6.4:+58218895 None:intergenic
ATGGCAGGAACTACTGGCTC+TGG 0.463153 6.4:+58219909 None:intergenic
TTGACATTGTCCTTCAGTGC+AGG 0.463814 6.4:+58216701 None:intergenic
ATGGTGGATCAGTTAAATAC+TGG 0.464696 6.4:-58220119 MS.gene05453:CDS
GAAAATCAATGTGAAGGTTG+GGG 0.466082 6.4:-58219183 MS.gene05453:CDS
CTTGAATCCTCTCCAGGGTG+TGG 0.466654 6.4:+58219068 None:intergenic
CATATTCCACTGGCCAACTT+GGG 0.467137 6.4:+58220318 None:intergenic
CCTGTAAAAGATTATGCGCT+GGG 0.470008 6.4:+58218479 None:intergenic
TGCGCCTCAGGAAGCTCTGC+AGG 0.470658 6.4:-58222398 MS.gene05453:CDS
TGCACCCGTTCTGTCTCTAT+TGG 0.471035 6.4:-58216992 MS.gene05453:intron
GTCATTCTCACCTTGGAAAG+AGG 0.472444 6.4:-58222703 MS.gene05453:CDS
AAAGATCTTGAATGAGCTCT+TGG 0.473069 6.4:+58218858 None:intergenic
CGCAGTGGCAATATATTGCC+TGG 0.476974 6.4:-58217724 MS.gene05453:intron
CATCACTAAGGTTTCCCCTT+CGG 0.477211 6.4:-58222975 MS.gene05453:CDS
GAGGCAAACTGATGCGCCTC+AGG 0.480873 6.4:-58222410 MS.gene05453:CDS
TGAGAACATTTACCTCCATT+GGG 0.481153 6.4:+58221087 None:intergenic
CCGGAAAAGGGAGCTACGGC+AGG 0.481286 6.4:-58222951 MS.gene05453:CDS
GGATGCCCCAACAACAGTAT+GGG 0.481816 6.4:-58223368 MS.gene05453:CDS
GACTATCAAGGAAGAGGTAG+AGG 0.486934 6.4:-58223306 MS.gene05453:CDS
TGCTGAGGAGGTCCTCCCCT+CGG 0.489225 6.4:+58223339 None:intergenic
GCTTATGGTGGTGGTGGACG+TGG 0.490674 6.4:-58223399 MS.gene05453:CDS
GGAGGTAATTAGGCCTCTGT+GGG 0.492567 6.4:+58221108 None:intergenic
GAGATGAACTAGCCTCAGAA+TGG 0.493485 6.4:+58223085 None:intergenic
GGTTCTTGACATTGTTCTCC+GGG 0.495881 6.4:-58222377 MS.gene05453:CDS
GAGCCACTGTCTGAAGTCTC+AGG 0.497162 6.4:+58216818 None:intergenic
ATTGTCCTTCAGTGCAGGCA+GGG 0.497532 6.4:+58216706 None:intergenic
TATCAGCATCAGACAGAGGC+CGG 0.497728 6.4:+58221962 None:intergenic
AGATGAACTAGCCTCAGAAT+GGG 0.498785 6.4:+58223086 None:intergenic
GGCTGCCTTCTACCTAGATC+AGG 0.501770 6.4:+58222224 None:intergenic
GGGTTTCCAACTTGCAAACA+AGG 0.503449 6.4:+58221128 None:intergenic
GCTGGATACCAGGGAGGCGG+AGG 0.504146 6.4:-58223465 MS.gene05453:CDS
GGTGGAGCGGGAGCTGCTGT+TGG 0.504161 6.4:-58216770 MS.gene05453:CDS
CGTAAGAGTCTCTATACTGC+TGG 0.504283 6.4:-58222662 MS.gene05453:CDS
GCTGCTGGATACCAGGGAGG+CGG 0.506165 6.4:-58223468 MS.gene05453:CDS
TTGAAAATCAATGTGAAGGT+TGG 0.506431 6.4:-58219185 MS.gene05453:CDS
GCATTCCACTTGTTAGTGAC+AGG 0.510308 6.4:-58219124 MS.gene05453:CDS
ATGGTACCCCTCTCATCCAC+AGG 0.510658 6.4:+58221212 None:intergenic
ACCTGTAAAAGATTATGCGC+TGG 0.511179 6.4:+58218478 None:intergenic
GGTATGGAGCAGAGGGTACA+GGG 0.512558 6.4:+58223139 None:intergenic
GGGTACGGTGGTGGAAGAGG+TGG 0.512930 6.4:-58223258 MS.gene05453:CDS
GATACCAAACTCTTCAGCAT+AGG 0.513040 6.4:+58220521 None:intergenic
ACCCCTCTAGATGTAACTTC+GGG 0.513331 6.4:+58222764 None:intergenic
ATACCAAACTCTTCAGCATA+GGG 0.514017 6.4:+58220522 None:intergenic
TATAGCGGTGGTGTTGGTGC+TGG 0.514524 6.4:-58223234 MS.gene05453:CDS
GTGCAGCTTTCAACATGGTC+AGG 0.514796 6.4:-58223581 None:intergenic
CTCCCGAAGTTACATCTAGA+GGG 0.515528 6.4:-58222766 MS.gene05453:CDS
GACGACACAGGGACTTGGTA+TGG 0.515686 6.4:+58223123 None:intergenic
GACGTCGTCGTTTCATCCTA+TGG 0.516154 6.4:-58223207 MS.gene05453:CDS
ATTTGGCTGCATTCAGGGCA+AGG 0.516437 6.4:-58216853 MS.gene05453:CDS
AGCATTAGCTCCAGGTGGAC+GGG 0.517389 6.4:+58216739 None:intergenic
AAGGATATGTGAGACTGACT+TGG 0.517490 6.4:-58219279 MS.gene05453:CDS
TGAACCACAACAAAAGTCAC+AGG 0.517817 6.4:+58217805 None:intergenic
GTTACAGCAGCTTGCTGTTG+AGG 0.517824 6.4:+58223495 None:intergenic
GTATGAAGGTTGCCTTGGTG+GGG 0.518799 6.4:+58223182 None:intergenic
CGAGGTGCTTATGGTGGTGG+TGG 0.519435 6.4:-58223405 MS.gene05453:CDS
AACTTACAGCTGCTATTGAT+GGG 0.519689 6.4:+58219045 None:intergenic
TAATGATACAGGTAGAGAAA+AGG 0.519942 6.4:-58220350 MS.gene05453:CDS
CATAAGCACCTCGTCCACCT+TGG 0.520906 6.4:+58223415 None:intergenic
CTAAGGTTTCCCCTTCGGCC+CGG 0.521265 6.4:-58222970 MS.gene05453:CDS
TCTGGAGGTTGTTGCTGAGG+AGG 0.521729 6.4:+58223327 None:intergenic
AGCTCACTACCATGTGCTGT+GGG 0.521942 6.4:-58217439 MS.gene05453:CDS
GGTATAAATACCCAAGGTGC+AGG 0.523373 6.4:+58220456 None:intergenic
GAGGAGGAGTCTCATCTGAA+TGG 0.525602 6.4:+58223013 None:intergenic
AAGCATTCGTCCTACTCAGA+TGG 0.526396 6.4:-58222162 MS.gene05453:CDS
TGGTGCAGCTCGGGGTATGA+AGG 0.526857 6.4:+58223168 None:intergenic
GTGGTGGACGTGGTGGACGT+GGG 0.527572 6.4:-58223389 MS.gene05453:CDS
TGCTGTTTCTCGTGGTGGAG+CGG 0.527910 6.4:-58216783 MS.gene05453:CDS
CAGGGAGGCGGAGGACCTCA+AGG 0.528040 6.4:-58223456 MS.gene05453:CDS
TTTCAGAAAATGTTCAATGG+TGG 0.528090 6.4:-58220135 MS.gene05453:intron
CTCAAAGCAAATCATCACTA+AGG 0.528413 6.4:-58222987 MS.gene05453:CDS
TAGACCCCTGCCTGCACTGA+AGG 0.528768 6.4:-58216711 MS.gene05453:CDS
TAGATTCCCTGTGGATGAGA+GGG 0.529313 6.4:-58221219 MS.gene05453:CDS
GAGCTACGGCAGGAAAACTT+TGG 0.529439 6.4:-58222941 MS.gene05453:CDS
CAACAGAACTCTTGTCATAG+TGG 0.530946 6.4:+58217749 None:intergenic
CAGCATTAGCTCCAGGTGGA+CGG 0.531984 6.4:+58216738 None:intergenic
CCAGTCAGAGGGACATTGAC+CGG 0.532705 6.4:-58218818 MS.gene05453:CDS
GGGAGGTAATTAGGCCTCTG+TGG 0.535516 6.4:+58221107 None:intergenic
AAAAGAGTCCCAGGTGGTGA+AGG 0.535629 6.4:+58222440 None:intergenic
TAATGTCCCGCTCTCTGTCA+AGG 0.537257 6.4:+58220902 None:intergenic
AGAAGGCAGCCTTCAGGCGA+GGG 0.537332 6.4:-58222212 MS.gene05453:CDS
TGAAGTCCTCTGCTTACCTT+CGG 0.537802 6.4:+58223521 None:intergenic
GTCAGGAAGAGAAGAACTGA+TGG 0.537962 6.4:-58223564 MS.gene05453:CDS
AGGATATGTGAGACTGACTT+GGG 0.540402 6.4:-58219278 MS.gene05453:CDS
GGACGTAGTACCCGTCCACC+TGG 0.540674 6.4:-58216749 MS.gene05453:CDS
CACAGCACATGGTAGTGAGC+TGG 0.541891 6.4:+58217441 None:intergenic
TAAAGAGAGCCATTATTATC+GGG 0.544232 6.4:+58219780 None:intergenic
GTCTGATGCTGATAGAGTAA+AGG 0.545084 6.4:-58221953 MS.gene05453:intron
CAGGCGAGGGATTGGAACGT+TGG 0.545263 6.4:-58222199 MS.gene05453:CDS
GGGCTGATAGTTGGGTTCAA+GGG 0.546127 6.4:+58217828 None:intergenic
TCCCTGGTATCCAGCAGCAC+CGG 0.546650 6.4:+58223473 None:intergenic
TGGGTAACAAACTCAATGAC+GGG 0.547311 6.4:+58222009 None:intergenic
CAGCTGGAGGTGACGACACA+GGG 0.547365 6.4:+58223112 None:intergenic
TATGCTCCCCAAGGTGGACG+AGG 0.548056 6.4:-58223423 MS.gene05453:CDS
TCCTTTGAAATAAAAGGAAG+CGG 0.549136 6.4:+58222638 None:intergenic
TCGGGGTATGAAGGTTGCCT+TGG 0.550205 6.4:+58223177 None:intergenic
GGGTTGCTTGGTGCAGCTCG+GGG 0.550232 6.4:+58223160 None:intergenic
TTGTCCTTCAGTGCAGGCAG+GGG 0.550964 6.4:+58216707 None:intergenic
GGAGGACCTCAAGGAGGCCG+TGG 0.551019 6.4:-58223447 MS.gene05453:CDS
TGTTTGAGCTTGATGCGATC+CGG 0.551622 6.4:-58218338 MS.gene05453:CDS
TTATGTAGATATGTTATCAA+CGG 0.551758 6.4:-58222049 MS.gene05453:intron
GGACGAGGTGCTTATGGTGG+TGG 0.551793 6.4:-58223408 MS.gene05453:CDS
CTCTTCCACCACCGTACCCA+CGG 0.551952 6.4:+58223262 None:intergenic
AACCCCTCTAGATGTAACTT+CGG 0.552655 6.4:+58222763 None:intergenic
GCCAGATATATAACACATCT+GGG 0.553123 6.4:+58220032 None:intergenic
GCGTCCCCTTGACAGAGAGC+GGG 0.559175 6.4:-58220908 MS.gene05453:CDS
AATGTCCCGCTCTCTGTCAA+GGG 0.560676 6.4:+58220903 None:intergenic
CCTTGTTCATCATATTCCAC+TGG 0.562778 6.4:+58220308 None:intergenic
CAAGGCGGCCGTGGGTACGG+TGG 0.562795 6.4:-58223270 MS.gene05453:CDS
ACCTGGAGGTAGGAAGCTCC+CGG 0.563491 6.4:+58222359 None:intergenic
GATGCCCCAACAACAGTATG+GGG 0.565241 6.4:-58223367 MS.gene05453:CDS
CAACAACCTCCAGACTATCA+AGG 0.565351 6.4:-58223318 MS.gene05453:CDS
CAAGCTCAAACAACAGCACC+TGG 0.566148 6.4:+58218349 None:intergenic
TTGGTCAGGACAAGCAGTAA+TGG 0.566719 6.4:+58219890 None:intergenic
CAGCTCACTACCATGTGCTG+TGG 0.567377 6.4:-58217440 MS.gene05453:CDS
ACAAACTCAATGACGGGCAA+CGG 0.568446 6.4:+58222015 None:intergenic
CGGCCCGGAAAAGGGAGCTA+CGG 0.569025 6.4:-58222955 MS.gene05453:CDS
AGTGATGATTTGCTTTGAGG+AGG 0.569311 6.4:+58222991 None:intergenic
GCAGCTGGAGGTGACGACAC+AGG 0.569626 6.4:+58223111 None:intergenic
AAATGTTTCAGGCACAGTTG+TGG 0.570101 6.4:-58217618 MS.gene05453:intron
CAAGATGCCTAAAGACAAAG+AGG 0.570175 6.4:-58219826 MS.gene05453:CDS
CACCTTGGGGAGCATAGCCA+CGG 0.570592 6.4:+58223430 None:intergenic
CAAATGTGCATAATAGGCTG+GGG 0.571339 6.4:+58216871 None:intergenic
CTAACAGCAGCATTAGCTCC+AGG 0.571633 6.4:+58216731 None:intergenic
CGTTCCAATCCCTCGCCTGA+AGG 0.571665 6.4:+58222203 None:intergenic
AGATAGAAGTCAAATTCTAT+CGG 0.572151 6.4:+58217578 None:intergenic
TCCACTTCAGTCACTTCTCG+TGG 0.572346 6.4:+58223060 None:intergenic
CGTGCTGACCTTCACCACCT+GGG 0.572918 6.4:-58222448 MS.gene05453:CDS
TGCAACAGCAAGGCGGCCGT+GGG 0.574528 6.4:-58223278 MS.gene05453:CDS
ATCAGCATCAGACAGAGGCC+GGG 0.575366 6.4:+58221963 None:intergenic
GAGGTGACGACACAGGGACT+TGG 0.575636 6.4:+58223118 None:intergenic
CAGAGAGCGGGACATTATGC+AGG 0.576262 6.4:-58220896 MS.gene05453:intron
TGATGTAGGTATCGTACAGT+GGG 0.577045 6.4:-58222263 MS.gene05453:intron
TCAGAATGGGGTGCAGCTGG+AGG 0.578367 6.4:+58223099 None:intergenic
AGCGTCCCCTTGACAGAGAG+CGG 0.578547 6.4:-58220909 MS.gene05453:CDS
CCTCTTCCTTGATAGTCTGG+AGG 0.578791 6.4:+58223312 None:intergenic
GCAAGATTGTGGAGTGCCAA+AGG 0.578920 6.4:-58220987 MS.gene05453:CDS
TAGAAGGCAGCCTTCAGGCG+AGG 0.579121 6.4:-58222213 MS.gene05453:CDS
CTGGGTAACAAACTCAATGA+CGG 0.579917 6.4:+58222008 None:intergenic
CCTACCAATAGAGACAGAAC+GGG 0.579982 6.4:+58216988 None:intergenic
CTGTACTGTCATTCTCACCT+TGG 0.580283 6.4:-58222710 MS.gene05453:CDS
GGCCGTGGCTATGCTCCCCA+AGG 0.580708 6.4:-58223432 MS.gene05453:CDS
CCTCCAGACTATCAAGGAAG+AGG 0.581217 6.4:-58223312 MS.gene05453:CDS
TTAGATTCCCTGTGGATGAG+AGG 0.581252 6.4:-58221220 MS.gene05453:intron
AGCATTCGTCCTACTCAGAT+GGG 0.581277 6.4:-58222161 MS.gene05453:CDS
AGCGGTGCTGTTTCTCGTGG+TGG 0.581296 6.4:-58216788 MS.gene05453:CDS
ATGGGCTTGAATCCTCTCCA+GGG 0.581631 6.4:+58219063 None:intergenic
CGGGCAATATAACAATGAGC+AGG 0.581988 6.4:+58219799 None:intergenic
CCTGAAATTACCAAGTATGC+TGG 0.582373 6.4:-58218905 MS.gene05453:CDS
GACATCCCTGTTAAGCAACT+GGG 0.582897 6.4:+58221990 None:intergenic
TGCTTTGAAAATCAATGTGA+AGG 0.584981 6.4:-58219189 MS.gene05453:CDS
GCCACGAGAAGTGACTGAAG+TGG 0.586559 6.4:-58223061 MS.gene05453:CDS
ACAGCAGCTTGCTGTTGAGG+AGG 0.586705 6.4:+58223498 None:intergenic
CAGCAGTATAGAGACTCTTA+CGG 0.587663 6.4:+58222663 None:intergenic
CTGCAGAGATGGAGTGAGCG+AGG 0.588292 6.4:-58218382 MS.gene05453:intron
AAGCAGGAAGCCTCTTTCCA+AGG 0.588861 6.4:+58222693 None:intergenic
AGAAGTCAAATTCTATCGGA+TGG 0.589463 6.4:+58217582 None:intergenic
CGGCAGGAAAACTTTGGTGA+AGG 0.592271 6.4:-58222935 MS.gene05453:CDS
GCAGATTACTGCCTTGCTCA+AGG 0.592559 6.4:-58220941 MS.gene05453:CDS
TAGTTACTTACGTGTAGCAG+AGG 0.594008 6.4:+58217370 None:intergenic
GCATAGCCACGGCCTCCTTG+AGG 0.594480 6.4:+58223441 None:intergenic
AAGGATTGTCTACCCCAAGT+TGG 0.595148 6.4:-58220331 MS.gene05453:CDS
TCAGGACAAGCAGTAATGGC+AGG 0.597909 6.4:+58219894 None:intergenic
AAATTACTTGATCATTCCAC+CGG 0.598196 6.4:+58218799 None:intergenic
ACCTACCAATAGAGACAGAA+CGG 0.599398 6.4:+58216987 None:intergenic
GGGTACCATGAAGTCTGTTG+TGG 0.599763 6.4:-58221198 MS.gene05453:CDS
ATTCAGGGCAAGGTTCTACA+TGG 0.600060 6.4:-58216843 MS.gene05453:CDS
ACTCCCGAAGTTACATCTAG+AGG 0.600446 6.4:-58222767 MS.gene05453:CDS
TCAGACATCGTGGCAACATG+AGG 0.601499 6.4:-58221373 MS.gene05453:CDS
ATGCCCCAACAACAGTATGG+GGG 0.606486 6.4:-58223366 MS.gene05453:CDS
TGTTACCCAGTTGCTTAACA+GGG 0.607482 6.4:-58221995 MS.gene05453:CDS
TGCAGAGATGGAGTGAGCGA+GGG 0.607863 6.4:-58218381 MS.gene05453:intron
GAGGGATTGGAACGTTGGCG+CGG 0.608381 6.4:-58222194 MS.gene05453:CDS
TTAATCAACAACCTGGAGGT+AGG 0.608657 6.4:+58222349 None:intergenic
TCGGAACCTTCAGCACCACT+GGG 0.608805 6.4:+58223540 None:intergenic
GGTGGATATAGCGGTGGTGT+TGG 0.608843 6.4:-58223240 MS.gene05453:CDS
TCCAGCTGCACCCCATTCTG+AGG 0.609254 6.4:-58223097 MS.gene05453:CDS
AGAGATAGTCCCATCTGAGT+AGG 0.610909 6.4:+58222152 None:intergenic
TAGTCTGGAGGTTGTTGCTG+AGG 0.611382 6.4:+58223324 None:intergenic
AGATTCCCTGTGGATGAGAG+GGG 0.613607 6.4:-58221218 MS.gene05453:CDS
GTCTACCCCAAGTTGGCCAG+TGG 0.614172 6.4:-58220324 MS.gene05453:CDS
ATATTCCACTGGCCAACTTG+GGG 0.615449 6.4:+58220319 None:intergenic
ACCGGTGCTGCTGGATACCA+GGG 0.615467 6.4:-58223474 MS.gene05453:CDS
AGCATAGGGATCGTTGTGGT+AGG 0.615634 6.4:+58220536 None:intergenic
GAGGCCTAATTACCTCCCAA+TGG 0.615802 6.4:-58221102 MS.gene05453:CDS
AAAATCAATGTGAAGGTTGG+GGG 0.616586 6.4:-58219182 MS.gene05453:CDS
TGCCCCAACAACAGTATGGG+GGG 0.619419 6.4:-58223365 MS.gene05453:CDS
AGGGACTTGGTATGGAGCAG+AGG 0.619817 6.4:+58223131 None:intergenic
ACTGAAGGACAATGTCAAGA+AGG 0.621685 6.4:-58216696 MS.gene05453:CDS
GGAAGAGGTGGATATAGCGG+TGG 0.622239 6.4:-58223246 MS.gene05453:CDS
GACAGTGGCTCGATGACAAG+CGG 0.623299 6.4:-58216806 MS.gene05453:CDS
AGAGGACCTGTGCAACAGCA+AGG 0.625125 6.4:-58223288 MS.gene05453:CDS
TATGGTGGTGGTGGACGTGG+TGG 0.625660 6.4:-58223396 MS.gene05453:CDS
GATGTGTTATATATCTGGCA+TGG 0.628045 6.4:-58220028 MS.gene05453:intron
GTAGGCCTGTCACTAACAAG+TGG 0.628046 6.4:+58219119 None:intergenic
GGGACTTGGTATGGAGCAGA+GGG 0.629020 6.4:+58223132 None:intergenic
CTGACAAGTGACCTTGAGCA+AGG 0.629069 6.4:+58220930 None:intergenic
GGTGGAAGAGGTGGATATAG+CGG 0.630064 6.4:-58223249 MS.gene05453:CDS
GAACCACAACAAAAGTCACA+GGG 0.630468 6.4:+58217806 None:intergenic
GCCTAATTACCTCCCAATGG+AGG 0.633042 6.4:-58221099 MS.gene05453:intron
GGTGGACGAGGTGCTTATGG+TGG 0.635909 6.4:-58223411 MS.gene05453:CDS
GATGTAGGTCTGCAAGATTG+TGG 0.636006 6.4:-58220998 MS.gene05453:intron
CAATGGCAAGATCCAGTCAG+AGG 0.636252 6.4:-58218830 MS.gene05453:CDS
ATGGGACTATCTCTGAACAT+TGG 0.636397 6.4:-58222143 MS.gene05453:intron
TTGTCATTCAGCATACTCAG+TGG 0.639268 6.4:-58221151 MS.gene05453:CDS
AGTGGTGCTGAAGGTTCCGA+AGG 0.639921 6.4:-58223537 MS.gene05453:CDS
TGAGCTTGATGCGATCCGGA+AGG 0.639965 6.4:-58218334 MS.gene05453:intron
TAAATACCCAAGGTGCAGGA+AGG 0.640485 6.4:+58220460 None:intergenic
AATGGCAAGATCCAGTCAGA+GGG 0.647252 6.4:-58218829 MS.gene05453:CDS
TTAACAGGGATGTCTCTGCC+CGG 0.647918 6.4:-58221981 MS.gene05453:CDS
ATGTCCCGCTCTCTGTCAAG+GGG 0.649826 6.4:+58220904 None:intergenic
GATGGACCCAGTGGTGCTGA+AGG 0.652004 6.4:-58223546 MS.gene05453:CDS
TCCCGAAGTTACATCTAGAG+GGG 0.652493 6.4:-58222765 MS.gene05453:CDS
ATGATGTAGGTATCGTACAG+TGG 0.654329 6.4:-58222264 MS.gene05453:intron
ACAAGCGGTGCTGTTTCTCG+TGG 0.657156 6.4:-58216791 MS.gene05453:CDS
AAGAGTTCTGTTGATCGCAG+TGG 0.657364 6.4:-58217739 MS.gene05453:CDS
GATGAACTAGCCTCAGAATG+GGG 0.658293 6.4:+58223087 None:intergenic
ACTCCAAAAGACTTAATGAG+AGG 0.658510 6.4:-58220963 MS.gene05453:CDS
CGTGGCTATGCTCCCCAAGG+TGG 0.658727 6.4:-58223429 MS.gene05453:CDS
TACTCATCCACACCCTGGAG+AGG 0.658921 6.4:-58219075 MS.gene05453:CDS
AGAACCTGCAGAGCTTCCTG+AGG 0.659523 6.4:+58222394 None:intergenic
GGAGGCGGAGGACCTCAAGG+AGG 0.659690 6.4:-58223453 MS.gene05453:CDS
AATTTACCTGAATACCAGCA+TGG 0.667275 6.4:+58217549 None:intergenic
AGGATGAAACGACGACGTCG+TGG 0.667720 6.4:+58223211 None:intergenic
CACACCTCTGTTCATCAACG+AGG 0.671162 6.4:+58222603 None:intergenic
GATGTTACTCATCCACACCC+TGG 0.672863 6.4:-58219080 MS.gene05453:CDS
GTCAGAGGGACATTGACCGG+TGG 0.675989 6.4:-58218815 MS.gene05453:CDS
ACTCTATCAGCATCAGACAG+AGG 0.677339 6.4:+58221958 None:intergenic
AAGAGGCTTCCTGCTTACGA+CGG 0.680702 6.4:-58222686 MS.gene05453:CDS
GAACATTTACCTCCATTGGG+AGG 0.681302 6.4:+58221090 None:intergenic
GTATGGAGCAGAGGGTACAG+GGG 0.683393 6.4:+58223140 None:intergenic
CAAGCTGCTCCATAACAGCA+CGG 0.686156 6.4:+58222738 None:intergenic
TCACCCTCGTTGATGAACAG+AGG 0.686306 6.4:-58222607 MS.gene05453:intron
AAGGTTCCGAAGGTAAGCAG+AGG 0.686570 6.4:-58223527 MS.gene05453:CDS
AGGGTGTGGATGAGTAACAT+CGG 0.686835 6.4:+58219082 None:intergenic
ACACCTCTGTTCATCAACGA+GGG 0.687813 6.4:+58222604 None:intergenic
GGATATGTGAGACTGACTTG+GGG 0.693219 6.4:-58219277 MS.gene05453:CDS
AAATGTGCATAATAGGCTGG+GGG 0.693841 6.4:+58216872 None:intergenic
CTGTAAAAGATTATGCGCTG+GGG 0.695234 6.4:+58218480 None:intergenic
CATCCTATGGAGCCCCACCA+AGG 0.698073 6.4:-58223194 MS.gene05453:CDS
TAGAGAAAGTTCTTAGAACG+CGG 0.700451 6.4:-58219866 MS.gene05453:CDS
AGAAGAACTGATGGACCCAG+TGG 0.701153 6.4:-58223555 MS.gene05453:CDS
CTTCAGCATAGGGATCGTTG+TGG 0.702920 6.4:+58220532 None:intergenic
TAAGCACCTCGTCCACCTTG+GGG 0.703809 6.4:+58223417 None:intergenic
TGGTACCCCTCTCATCCACA+GGG 0.707006 6.4:+58221213 None:intergenic
GAACCTGAGACTTCAGACAG+TGG 0.707171 6.4:-58216821 MS.gene05453:CDS
ACCACAACAAAAGTCACAGG+GGG 0.708627 6.4:+58217808 None:intergenic
ACAGCAGCATTAGCTCCAGG+TGG 0.710414 6.4:+58216734 None:intergenic
GTGCAAGATAGTGTTGCATG+TGG 0.712744 6.4:-58220072 MS.gene05453:CDS
AAAGTTGAAGTCAGACATCG+TGG 0.713051 6.4:-58221383 MS.gene05453:CDS
GCACATGGTAGTGAGCTGGA+CGG 0.725855 6.4:+58217445 None:intergenic
GGTGCTGCTGGATACCAGGG+AGG 0.726567 6.4:-58223471 MS.gene05453:CDS
CCAGTGGAATATGATGAACA+AGG 0.738050 6.4:-58220308 MS.gene05453:intron
GGACCTGTGCAACAGCAAGG+CGG 0.741238 6.4:-58223285 MS.gene05453:CDS
TGCAAGTTGGAAACCCACAG+AGG 0.746822 6.4:-58221121 MS.gene05453:CDS
GTGAAGTCAGACCAGCAATG+CGG 0.759116 6.4:+58221342 None:intergenic
GATATGTGAGACTGACTTGG+GGG 0.764205 6.4:-58219276 MS.gene05453:CDS
AACCACAACAAAAGTCACAG+GGG 0.770972 6.4:+58217807 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.4 gene 58216679 58223589 58216679 ID=MS.gene05453
chr6.4 mRNA 58216679 58223589 58216679 ID=MS.gene05453.t1;Parent=MS.gene05453
chr6.4 exon 58222885 58223589 58222885 ID=MS.gene05453.t1.exon1;Parent=MS.gene05453.t1
chr6.4 CDS 58222885 58223589 58222885 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58222608 58222798 58222608 ID=MS.gene05453.t1.exon2;Parent=MS.gene05453.t1
chr6.4 CDS 58222608 58222798 58222608 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58222361 58222510 58222361 ID=MS.gene05453.t1.exon3;Parent=MS.gene05453.t1
chr6.4 CDS 58222361 58222510 58222361 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58222144 58222277 58222144 ID=MS.gene05453.t1.exon4;Parent=MS.gene05453.t1
chr6.4 CDS 58222144 58222277 58222144 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58221954 58222063 58221954 ID=MS.gene05453.t1.exon5;Parent=MS.gene05453.t1
chr6.4 CDS 58221954 58222063 58221954 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58221323 58221429 58221323 ID=MS.gene05453.t1.exon6;Parent=MS.gene05453.t1
chr6.4 CDS 58221323 58221429 58221323 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58221100 58221238 58221100 ID=MS.gene05453.t1.exon7;Parent=MS.gene05453.t1
chr6.4 CDS 58221100 58221238 58221100 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58220897 58221013 58220897 ID=MS.gene05453.t1.exon8;Parent=MS.gene05453.t1
chr6.4 CDS 58220897 58221013 58220897 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58220467 58220574 58220467 ID=MS.gene05453.t1.exon9;Parent=MS.gene05453.t1
chr6.4 CDS 58220467 58220574 58220467 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58220309 58220380 58220309 ID=MS.gene05453.t1.exon10;Parent=MS.gene05453.t1
chr6.4 CDS 58220309 58220380 58220309 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58220029 58220151 58220029 ID=MS.gene05453.t1.exon11;Parent=MS.gene05453.t1
chr6.4 CDS 58220029 58220151 58220029 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58219778 58219940 58219778 ID=MS.gene05453.t1.exon12;Parent=MS.gene05453.t1
chr6.4 CDS 58219778 58219940 58219778 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58219052 58219311 58219052 ID=MS.gene05453.t1.exon13;Parent=MS.gene05453.t1
chr6.4 CDS 58219052 58219311 58219052 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58218806 58218948 58218806 ID=MS.gene05453.t1.exon14;Parent=MS.gene05453.t1
chr6.4 CDS 58218806 58218948 58218806 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58218480 58218542 58218480 ID=MS.gene05453.t1.exon15;Parent=MS.gene05453.t1
chr6.4 CDS 58218480 58218542 58218480 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58218335 58218398 58218335 ID=MS.gene05453.t1.exon16;Parent=MS.gene05453.t1
chr6.4 CDS 58218335 58218398 58218335 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58217725 58217860 58217725 ID=MS.gene05453.t1.exon17;Parent=MS.gene05453.t1
chr6.4 CDS 58217725 58217860 58217725 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58217556 58217629 58217556 ID=MS.gene05453.t1.exon18;Parent=MS.gene05453.t1
chr6.4 CDS 58217556 58217629 58217556 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58217381 58217475 58217381 ID=MS.gene05453.t1.exon19;Parent=MS.gene05453.t1
chr6.4 CDS 58217381 58217475 58217381 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58216993 58217024 58216993 ID=MS.gene05453.t1.exon20;Parent=MS.gene05453.t1
chr6.4 CDS 58216993 58217024 58216993 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
chr6.4 exon 58216679 58216896 58216679 ID=MS.gene05453.t1.exon21;Parent=MS.gene05453.t1
chr6.4 CDS 58216679 58216896 58216679 ID=cds.MS.gene05453.t1;Parent=MS.gene05453.t1
Gene Sequence

>MS.gene05453

ATGGTCAGGAAGAGAAGAACTGATGGACCCAGTGGTGCTGAAGGTTCCGAAGGTAAGCAGAGGACTTCACCTCCTCAACAGCAAGCTGCTGTAACCGGTGCTGCTGGATACCAGGGAGGCGGAGGACCTCAAGGAGGCCGTGGCTATGCTCCCCAAGGTGGACGAGGTGCTTATGGTGGTGGTGGACGTGGTGGACGTGGGATGCCCCAACAACAGTATGGGGGGCATCCGAGGGGAGGACCTCCTCAGCAACAACCTCCAGACTATCAAGGAAGAGGTAGAGGACCTGTGCAACAGCAAGGCGGCCGTGGGTACGGTGGTGGAAGAGGTGGATATAGCGGTGGTGTTGGTGCTGGCCACGACGTCGTCGTTTCATCCTATGGAGCCCCACCAAGGCAACCTTCATACCCCGAGCTGCACCAAGCAACCCCTGTACCCTCTGCTCCATACCAAGTCCCTGTGTCGTCACCTCCAGCTGCACCCCATTCTGAGGCTAGTTCATCTCAGCCACGAGAAGTGACTGAAGTGGAACAGGATTTGGGACAGTTGACAATCCATTCAGATGAGACTCCTCCTCCTCCTCAAAGCAAATCATCACTAAGGTTTCCCCTTCGGCCCGGAAAAGGGAGCTACGGCAGGAAAACTTTGGTGAAGGCAAACCATTTCTTTGTTGAGTTGCCTAAGAAGGATCTTCATCAGTATGATGTAAGTTCCACTTTTTTAATGATTTTATTAGTTGTTTATCTTTGGTTTGACACTTACTGATTTTTTTGTTGCTCTTGGTTGCTTAGGTTACAATTACTCCCGAAGTTACATCTAGAGGGGTTAACCGTGCTGTTATGGAGCAGCTTGTAAAGCTGTACTGTCATTCTCACCTTGGAAAGAGGCTTCCTGCTTACGACGGCCGTAAGAGTCTCTATACTGCTGGTCCGCTTCCTTTTATTTCAAAGGACTTCAAAATCACCCTCGTTGATGAACAGAGGTGTGCTTCATGTTATTTAGTTTTATTTGTGTTTTTCCATTGTCAAATTCACCCTTAGTTATTTTAATATTTAATTGATTAATTGATTTTGACACAGGAGGGATAGGGAGTTCAAAGTTGTGATTAAATTGGCTGCACGTGCTGACCTTCACCACCTGGGACTCTTTTTGGAGGGGAGGCAAACTGATGCGCCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTCCGGGAGCTTCCTACCTCCAGGTTGTTGATTAACTTATTTCTGTATTGAATGCATTTTGGTTCACCCTGTTTATGTCTGGCTAAGCGTACTTTTAATGATGTAGGTATCGTACAGTGGGAAGATCCTTTTATTTACCTGATCTAGGTAGAAGGCAGCCTTCAGGCGAGGGATTGGAACGTTGGCGCGGTTTCTATCAAAGCATTCGTCCTACTCAGATGGGACTATCTCTGAACATTGGTGCGTATTTTCATTTTGCGTGACCATTTTTCTGCAGTCAATCAATCTGCCGACTAATCATTCTTTTTTTATTTATGTAGATATGTTATCAACGGCATTTATTGAGCCGTTGCCCGTCATTGAGTTTGTTACCCAGTTGCTTAACAGGGATGTCTCTGCCCGGCCTCTGTCTGATGCTGATAGAGTAAAGGTTAGTTTTGTTGACTTGTACAAATTTATCTACAGTCATTTTAAATGCTGTCATTCCTTAGATTTTGTTGTATTCTAAGTTTACAAGCAGTTTGCAGCATTATAAAACATTCATTTAGTTATGTTTTTGTCTGCAGCATTGCTCCTTTGATTTTGTTGTTACCGTATCGCAAGTTTACATGTAATCTGCAGCTATAAAAACAATCATTTAGTGTGATCTGCAGTTTTGCTCCTTTGATTTTGTTAGTGTATCGCAATTTTCCGTTCAGTTTGTAGTTTCATAAACATTCATCTACTTTAGTTTAGCAGATCTCGTGTGTTTTGCTCGTTGGTCTAGGAAAATTAGAATGATAATTTTGCAAGGACTTGAATGAATTTTTCTCGTTATTTTACACGCCGTTTGTTGTGATACAGACTTTCATTTAGTATAGTTTAACAGAACTCTCCTAGAGGTTTTACTCATTGCTCTAGAATAAAATGAGATTGATTATTTTTCAAGTCCTTATTGAATTTTCCTAATGACAGATCAAAAAGGCACTTCGTGGTATCAAAGTTGAAGTCAGACATCGTGGCAACATGAGGAGAAAATACCGCATTGCTGGTCTGACTTCACAAGCTACCAGAGAATTAACGTGAGTAGTAGTGCTATGTATTTTTTTGCATGCAATGTTTAAATTCTTTTGCTGACTTTCTTTTAACTTCTCAATAATTTTTAGATTCCCTGTGGATGAGAGGGGTACCATGAAGTCTGTTGTGGAGTATTTCTTTGAGACATATGGTTTTGTCATTCAGCATACTCAGTGGCCTTGTTTGCAAGTTGGAAACCCACAGAGGCCTAATTACCTCCCAATGGAGGTAAATGTTCTCATTAGTTCTCTCCTTTTCGCTATTGTATTTTTTATGCCTGGCTACGTTATGTTAATTTTGTTTGTTGGATGTAGGTCTGCAAGATTGTGGAGTGCCAAAGGTACTCCAAAAGACTTAATGAGAGGCAGATTACTGCCTTGCTCAAGGTCACTTGTCAGCGTCCCCTTGACAGAGAGCGGGACATTATGCAGGTCAGCAGAATTGTTGAGATATAAACAACTCAATTTATTTTTAGCTTATGAAAGAACTGATGATGTTGTGCAGTTTTTTATATTGCTATATTTTACTGAATGGTTCCTATATGCGTGTTGGTATGTTGTTCTATGTAGGATTGACATGCCTGTTAGTCTGTTGTTGTGTTTAATGTTTATAGTTGATGTCATTCTGTGCTATATACGTACTGGTATGTTGTTCTATGTAGGATTGACATGTCTGTTAGTTTGTTGTTTTGTGTTTAATGTTTATAGTTGATGTCATTCCGTGGTTAATCCACCTTGTTCTTTCTTTGTTCAGACAGTACATCTCAATGCCTACCACAACGATCCCTATGCTGAAGAGTTTGGTATCAAAATCAGCGATCAACTTGCTCAAGTCGAAGCTCGCATCCTTCCTGCACCTTGGGTATTTATACCTTGTGACAACAATTACCATTGTTTAACTGAATTTTTATACTTGCTTATTTATGTTAATGTCATTTTTCCTTGCAGCTCAAATATAATGATACAGGTAGAGAAAAGGATTGTCTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGGTGATTTGTTTTTTTTTTGTTTTTTTTTTTTATCTGCACTTGTTGGAAGCCACAGATGTATTTTACAAATTCAACTGTATATTTTCCATACAGCTTTACCCTGTTTTTTGTGCCAATGCAATTAGACATGGAAACTAATTTGCGGTCTAATTTTCAGAAAATGTTCAATGGTGGATCAGTTAAATACTGGTTATGTGTTAACTTTTCAAGGACTGTGCAAGATAGTGTTGCATGTGGCTTCTGCTATGAGCTTGCCCAGATGTGTTATATATCTGGCATGGTATGTATATGATGTTTGCTTTGGTAATATCTTCAGTGAAACTTTTTTTCATTTTTAAACAATTGATAATTTTATCTTTGTTAATCAGGAATTTAATCCAGAGCCAGTAGTTCCTGCCATTACTGCTTGTCCTGACCAAGTAGAGAAAGTTCTTAGAACGCGGTATCATGATGCGAAGAGCAAGATGCCTAAAGACAAAGAGGTTGACCTGCTCATTGTTATATTGCCCGATAATAATGGCTCTCTTTACGGTAAATGATTCTTTGACATTTACTTTTACTCCCTTACCATATTCAATTGAAATTTTTCTTCACTTAGCCAGTATACTGAATTTTCCTTTAGGAACTGGAGTTTCTGGCTTGCACTAAATCAGTAGCATCTAGATAGTTAATTCCTGACATAAAAACTGCAACGTTTACTTTTTCTCTCATTTTTTTTTCTCACAGCACACTAATTTATATGAACTTTGGCATATCCTTCCTATTTTTTAGTTTTGACTTTGGTATAACCTTCCTGTTCTTTAATGAAGTTTGTCATATCCTTAATTATATAATTAAGTTGGCCCAGAGTCACTCATCCTTCCTATTTTTTAAATGATTTGCCTACCAACTTAATTACATAATAGAAGTTCACAAAATTTGACCCCTACAGACCTGGTCTACCTTTGGTCCAGTGGATAGCAAGTGACTTAATTGTTGGTGATTATCTGATATGCAGGTGACCTTAAAAGGATATGTGAGACTGACTTGGGGGTTGTTTCTCAGTGCTGTTTAACCAAACATGTATTTAAGATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATCAATGTGAAGGTTGGGGGTAGGAATACAGTGCTTGTTGATGCACTTTCTCGACGCATTCCACTTGTTAGTGACAGGCCTACTATCATTTTTGGGGCCGATGTTACTCATCCACACCCTGGAGAGGATTCAAGCCCATCAATAGCAGCTGTAAGTTTTGTACATATGTGATTTGTTTTTAATTCCAAGCAACTCAAGCTTGAATATATGTTTTTACTTTCTCTATTTTAAATAACGCTCTTCGATATTGTAGGTTGTTGCTTCTCAAGACTGGCCTGAAATTACCAAGTATGCTGGTCTGGTTTGTGCCCAAGCACATCGCCAAGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATCCAGTCAGAGGGACATTGACCGGTGGAATGATCAAGTAATTTCTTTAACTCTGCATTATATGGCATACGAATGCAAACATTTAAATATGAAAATTGTCCTTCAACCAAACTAACCAACCCATTCCCAAGGGAAGGCAAAAATAACACATAACTGATCTGTTATATACAATAAAATCAGAACAAATTTATTATAAAATCTTAGTAATACTCAATGAGTTGGAATATATATCTTTTAGATCCTTCAGTCATAAAAAATTCATCTTTGTTGACTTGATTGATTTTGTTTAAATTTTTATAGGGAGCTTCTTATATCTTTCCGTAGAGCTACTGGACAAAAGCCCCAGCGCATAATCTTTTACAGGTAATTATTTTTGTTGTTTGTTCATGTTCATTTGTATTTGTTATTATGATGATTCTTAAACTCTAATATTACTTGCTGCAGAGATGGAGTGAGCGAGGGACAATTTTACCAGGTGCTGTTGTTTGAGCTTGATGCGATCCGGAAGGTAACTGTTTTTTGTGGTTGTTTCCATAGTTTCAAACTAATAAAGTGTTCTTATTGTGCTCACTGTATTATTAGCAGAGACACATTATTATAACAGATAGAGACATTATGTTAAAACATAAGTAGTAATTATGGCCTAAAGCATTGCCTGCGTATGTTAAGATAAACTACAGCAAAATAGTTTATTTTATCTATAGCGTAGGACTATTAAAAGTTCTTTCTAACCTGGTTGCTATACCTTTCTTGGGGGAACAAAGGACTGTTGTTAGAATATGATTACTATATCCTCAGTAGAGGCACAAAGGATCATAATGGACGTTCTATTGAATACTTGAACCTGCTTCCAGTTTTTCAAAAAAATTAGAAAAGTAGCTATTAGCTCTGCTGAAACTGTTTTTCTTGGTTATTTCAACAATTTCAATTTATTTTTATTCTGCTAACGTTTTATCCTATCCTACCTGTTTCTCCTTATCAGGCTTGTGCATCCCTTGAACCCAACTATCAGCCCCCTGTGACTTTTGTTGTGGTTCAAAAACGTCATCATACTAGGCTATTTGCCAGTAACCACTATGACAAGAGTTCTGTTGATCGCAGTGGCAATATATTGCCTGGTATTTATTCCAACTTCTTATTATGAATGCTTTTCTTATGATTTTTATTTACAAGGCTGATGCGAGTATATGTATACTACTTGGAAATGTTTCAGGCACAGTTGTGGATTCTAAGATCTGCCATCCGATAGAATTTGACTTCTATCTTTGCAGCCATGCTGGTATTCAGGTAAATTTTTTGCTGCTTTTGTGGGTAAAATAATTGAAGTTGAATTATTGTATATGTTCTTACGTCAATGAAATTTGCAGGGCACAAGCCGTCCAGCTCACTACCATGTGCTGTGGGATGAAAATAATTTTTGTGCTGATGGTCTACAAAGTCTAACTAATAACCTCTGCTACACGTAAGTAACTAACTTGTAACGTGATTTGGAGTTTCCCTTGTTTTTTTCAGCCCCACTGCTCTGTTTGTTTATCAAATGCCTCCAAACTAAACTTTTCCTTTTTTTAAACACATAAGTTGTATACAGTTTTGTTTGTTTATCACACTTCACATTAAACTTCTCAATTCTGCTTTTTTAAGACATATATATCAACAGTTGTTTGATTTTCATACCTTCACTTCAAACTTCACATTTCTTAATGTTTAAAACATCAACAGTTGTGTACTGTTTCGTCTGTTTATCATGCCTTCTAACTTCACAAATTTTTCATTCTGAAATCGTTTTAATGTGGTGTCATCTTTGATTATTTACTGCAGATATGCCAGATGCACCCGTTCTGTCTCTATTGGTAGGTTTTCCATTTTCTTTATATATTAGAAACTAATTAGATTCATAGTTATTTAATATTGTGTTCTGTTAACAATTTGTGTTGTTATAATTGCAGTGCCCCCAGCCTATTATGCACATTTGGCTGCATTCAGGGCAAGGTTCTACATGGAACCTGAGACTTCAGACAGTGGCTCGATGACAAGCGGTGCTGTTTCTCGTGGTGGAGCGGGAGCTGCTGTTGGACGTAGTACCCGTCCACCTGGAGCTAATGCTGCTGTTAGACCCCTGCCTGCACTGAAGGACAATGTCAAGAAGGTCATGTTCTACTGTTGA
Protein sequence

>MS.gene05453.t1

MVRKRRTDGPSGAEGSEGKQRTSPPQQQAAVTGAAGYQGGGGPQGGRGYAPQGGRGAYGGGGRGGRGMPQQQYGGHPRGGPPQQQPPDYQGRGRGPVQQQGGRGYGGGRGGYSGGVGAGHDVVVSSYGAPPRQPSYPELHQATPVPSAPYQVPVSSPPAAPHSEASSSQPREVTEVEQDLGQLTIHSDETPPPPQSKSSLRFPLRPGKGSYGRKTLVKANHFFVELPKKDLHQYDVTITPEVTSRGVNRAVMEQLVKLYCHSHLGKRLPAYDGRKSLYTAGPLPFISKDFKITLVDEQRRDREFKVVIKLAARADLHHLGLFLEGRQTDAPQEALQVLDIVLRELPTSRYRTVGRSFYLPDLGRRQPSGEGLERWRGFYQSIRPTQMGLSLNIDMLSTAFIEPLPVIEFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVRHRGNMRRKYRIAGLTSQATRELTFPVDERGTMKSVVEYFFETYGFVIQHTQWPCLQVGNPQRPNYLPMEVCKIVECQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHLNAYHNDPYAEEFGIKISDQLAQVEARILPAPWLKYNDTGREKDCLPQVGQWNMMNKKMFNGGSVKYWLCVNFSRTVQDSVACGFCYELAQMCYISGMEFNPEPVVPAITACPDQVEKVLRTRYHDAKSKMPKDKEVDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHYDKSSVDRSGNILPGTVVDSKICHPIEFDFYLCSHAGIQGTSRPAHYHVLWDENNFCADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVSRGGAGAAVGRSTRPPGANAAVRPLPALKDNVKKVMFYC