AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004115


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004115.t1 MTR_4g062090 94.769 822 23 4 1 819 1 805 0.0 1563
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004115.t1 AT3G46220 61.314 822 292 3 1 818 1 800 0.0 994
MS.gene004115.t1 AT3G46220 60.723 830 292 4 1 818 1 808 0.0 986
MS.gene004115.t1 AT3G46220 59.854 822 288 4 1 818 1 784 0.0 961
MS.gene004115.t1 AT3G46220 61.626 787 276 3 1 783 1 765 0.0 955

Find 158 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAGCTTGGAGAGCTTTA+TGG 0.122705 4.2:-42440341 None:intergenic
TTCTTCCAGTCTTTGTTTAA+TGG 0.150208 4.2:+42435712 MS.gene004115:CDS
GGATTTGATTGCATCTATTT+TGG 0.151120 4.2:+42435394 MS.gene004115:CDS
TCTAACAAAGCACACATATT+TGG 0.182367 4.2:+42436755 MS.gene004115:CDS
GGCCTTTGGCTAACAAATTA+AGG 0.230421 4.2:+42437948 MS.gene004115:CDS
GAGCTTCTTCATACTGCTTC+TGG 0.232031 4.2:+42434442 MS.gene004115:CDS
TCCCAGAGCTCTTGCAAATA+AGG 0.240932 4.2:+42438937 MS.gene004115:CDS
TGTTGCTATTTCTCACTTGC+AGG 0.243124 4.2:+42440377 MS.gene004115:CDS
AGGTTTGCCTTCAGGGTATC+TGG 0.246961 4.2:-42436342 None:intergenic
ATCATCTTCAAACAATTCTA+AGG 0.250541 4.2:-42438238 None:intergenic
AAATTATTACGGAGTCTTAC+TGG 0.262997 4.2:+42435282 MS.gene004115:CDS
CTAACAAAGCACACATATTT+GGG 0.278844 4.2:+42436756 MS.gene004115:CDS
TCTGAGTACAAGAGAGCTTC+TGG 0.282486 4.2:+42441914 MS.gene004115:CDS
GAAGTATGTTCTTGGTTATC+AGG 0.292210 4.2:-42437640 None:intergenic
GTAACAAGAGGTTTGCCTTC+AGG 0.303416 4.2:-42436350 None:intergenic
TTAGCTGTTTCAAGGTCTTT+AGG 0.316152 4.2:+42437433 MS.gene004115:CDS
TCAAACAAGCATGCTGATAA+AGG 0.317743 4.2:+42437556 MS.gene004115:CDS
ATCGATCTTGCTGATGTTAC+TGG 0.324699 4.2:+42435182 MS.gene004115:CDS
AGACCTTGTTCTTCAAAATC+AGG 0.330357 4.2:-42437820 None:intergenic
AACTGCTACTGTGACTCTTT+TGG 0.335660 4.2:+42441199 MS.gene004115:CDS
GTTGCTGAGGTGAAGAAGTT+AGG 0.347127 4.2:+42435146 MS.gene004115:CDS
CTGATTCAAAGCCAGGTTCT+AGG 0.347633 4.2:+42437716 MS.gene004115:CDS
ATCTGTACAATTGGCACTTA+AGG 0.357383 4.2:+42436658 MS.gene004115:CDS
CGAAACGATTCTTAGGCCTT+TGG 0.365599 4.2:+42437934 MS.gene004115:CDS
GCAGAATTTACTACAAGAAA+TGG 0.369393 4.2:+42435657 MS.gene004115:CDS
GCTAGTGGTGTGGCTGTTGA+TGG 0.370444 4.2:+42435685 MS.gene004115:CDS
TAACAAGAGGTTTGCCTTCA+GGG 0.375702 4.2:-42436349 None:intergenic
TAGAGTAAAGACACAACTTT+TGG 0.377868 4.2:-42440214 None:intergenic
GCAACAGAAATGGCCCTTCC+AGG 0.383656 4.2:-42440360 None:intergenic
CAAAGGCCTAAGAATCGTTT+CGG 0.385086 4.2:-42437933 None:intergenic
CCAGCCCATTCAATTCTTGC+AGG 0.389058 4.2:+42436189 MS.gene004115:CDS
CGACGAACTTGACAGTGTTA+TGG 0.390294 4.2:+42435626 MS.gene004115:CDS
GGTATTTGCTGTTGCTCAAA+AGG 0.395194 4.2:+42435942 MS.gene004115:intron
TAGAGACATTAGCTGTTTCA+AGG 0.395214 4.2:+42437425 MS.gene004115:CDS
TGTAAAAGATGAGGGCAATA+AGG 0.397783 4.2:-42436600 None:intergenic
AGCCTTATTTGCAAGAGCTC+TGG 0.397884 4.2:-42438939 None:intergenic
GTTGAGTGAGTCCAGTGATA+TGG 0.400982 4.2:+42437519 MS.gene004115:CDS
CTTGTACTATGTTGAGAAGT+TGG 0.407899 4.2:+42435211 MS.gene004115:CDS
AACGAAATAGACTCGGACTT+TGG 0.407948 4.2:-42438549 None:intergenic
AAATTAAGGCCTACAATAAT+CGG 0.409313 4.2:+42437962 MS.gene004115:CDS
ATGATCCCGAAACGATTCTT+AGG 0.413786 4.2:+42437927 MS.gene004115:CDS
GAATCAAGGGGAAATTATTA+CGG 0.415672 4.2:+42435271 MS.gene004115:CDS
TCGATCGGATAATCGAATAC+TGG 0.419545 4.2:-42434368 None:intergenic
GCCTTATTTGCAAGAGCTCT+GGG 0.426131 4.2:-42438938 None:intergenic
CTGCAAGAATTGAATGGGCT+GGG 0.428207 4.2:-42436188 None:intergenic
AGGTGCTGCAAGGGGTATTA+CGG 0.428595 4.2:+42435600 MS.gene004115:CDS
ATGTAGTCAGATTGCTTTGA+CGG 0.434988 4.2:+42435343 MS.gene004115:CDS
GAGTCTATTTCGTTTGGTCC+TGG 0.436482 4.2:+42438558 MS.gene004115:CDS
AGTTACCTGCAAGAATTGAA+TGG 0.442405 4.2:-42436194 None:intergenic
TGATATGCTTCTTCATGACT+TGG 0.442992 4.2:+42438400 MS.gene004115:CDS
TCTAGCATCTCAATCATTGA+TGG 0.444749 4.2:-42436386 None:intergenic
CTCCATGATCCATTCTTCTG+AGG 0.446930 4.2:-42437779 None:intergenic
TCCATGATCCATTCTTCTGA+GGG 0.447510 4.2:-42437778 None:intergenic
ATGTATCCTTACCCCTTCTC+TGG 0.448426 4.2:-42437681 None:intergenic
CAAACATCTGATTCAAAGCC+AGG 0.458721 4.2:+42437709 MS.gene004115:CDS
AAGGACAGTAGCAGCTCCTA+TGG 0.468025 4.2:+42438376 MS.gene004115:CDS
AAAATAGGTGAAAGGAAGGC+TGG 0.472868 4.2:+42435522 MS.gene004115:intron
CATAAAGCTCTCCAAGCTCC+TGG 0.473304 4.2:+42440342 MS.gene004115:CDS
CCTCTGTCAATCTGTACAAT+TGG 0.473516 4.2:+42436649 MS.gene004115:CDS
TCAGTAATCCCTCAGAAGAA+TGG 0.473944 4.2:+42437770 MS.gene004115:CDS
AAGTCCGAGTCTATTTCGTT+TGG 0.475727 4.2:+42438552 MS.gene004115:CDS
ACAATTGCAGCTCTTTCTCC+AGG 0.477560 4.2:-42438576 None:intergenic
ATCCAAGTACCGATTATTGT+AGG 0.478083 4.2:-42437971 None:intergenic
GTTACCTGCAAGAATTGAAT+GGG 0.480088 4.2:-42436193 None:intergenic
CAAACAAGCATGCTGATAAA+GGG 0.481031 4.2:+42437557 MS.gene004115:CDS
CAAGTCCATTAAACAAAGAC+TGG 0.481057 4.2:-42435717 None:intergenic
CCTGCAAGAATTGAATGGGC+TGG 0.481773 4.2:-42436189 None:intergenic
ACCATCACTCGCCATATCAC+TGG 0.484013 4.2:-42437530 None:intergenic
AAAGGCCTAAGAATCGTTTC+GGG 0.485000 4.2:-42437932 None:intergenic
AAATGGCCCTTCCAGGAGCT+TGG 0.485022 4.2:-42440353 None:intergenic
GTGAGAAATAGCAACAGAAA+TGG 0.485883 4.2:-42440370 None:intergenic
CATGGTTCGAGGTGCTGCAA+GGG 0.489197 4.2:+42435591 MS.gene004115:CDS
CCATGGTTCGAGGTGCTGCA+AGG 0.490990 4.2:+42435590 MS.gene004115:CDS
TACAATAATCGGTACTTGGA+TGG 0.492143 4.2:+42437973 MS.gene004115:CDS
CTTGCGGCGCAGTTGAATGT+TGG 0.492333 4.2:+42435368 MS.gene004115:CDS
GGCCTACAATAATCGGTACT+TGG 0.493020 4.2:+42437969 MS.gene004115:CDS
TGTGTCTTTACTCTATGTCC+AGG 0.495283 4.2:+42440222 MS.gene004115:CDS
TTTGTTTAATGGACTTGTGA+AGG 0.496709 4.2:+42435723 MS.gene004115:CDS
AAGAGCTCTGGGAAAACTCT+TGG 0.498310 4.2:-42438927 None:intergenic
AATTATTACGGAGTCTTACT+GGG 0.499853 4.2:+42435283 MS.gene004115:CDS
GGCGCAGTTGAATGTTGGTT+TGG 0.502490 4.2:+42435373 MS.gene004115:CDS
GCAGAATTGATGTTGAATCA+AGG 0.510377 4.2:+42435257 MS.gene004115:CDS
GCTGAGCAGCAGCTTTATGA+AGG 0.512016 4.2:+42436790 MS.gene004115:CDS
CTCATTAATCTCTTCAGCAA+TGG 0.513124 4.2:-42435309 None:intergenic
TTGCTGAGGTGAAGAAGTTA+GGG 0.514417 4.2:+42435147 MS.gene004115:CDS
TTTGAAAATAGGTGAAAGGA+AGG 0.516894 4.2:+42435518 MS.gene004115:intron
GGCCTTAATTTGTTAGCCAA+AGG 0.518576 4.2:-42437950 None:intergenic
AGTGATTCTTTCCTAGAACC+TGG 0.521168 4.2:-42437727 None:intergenic
CCGTTCGCGCTGGAGTACAT+TGG 0.525009 4.2:+42435764 MS.gene004115:CDS
TCTTGCTGTTGTAGAAGCAT+TGG 0.532428 4.2:+42438961 MS.gene004115:CDS
CAGAATTGATGTTGAATCAA+GGG 0.534268 4.2:+42435258 MS.gene004115:CDS
AGAATCACTTAAAATGAAAG+AGG 0.537589 4.2:+42437741 MS.gene004115:CDS
AATGCCGGCTCTCAAAAGCT+TGG 0.538599 4.2:+42441944 MS.gene004115:CDS
TAATTCAACGACGTTTCGAT+CGG 0.539095 4.2:-42434383 None:intergenic
AATCTAAGAAAGGCCAGAGA+AGG 0.539351 4.2:+42437668 MS.gene004115:CDS
ATGCTCTAGAACGTGGAAGC+TGG 0.540745 4.2:+42436423 MS.gene004115:CDS
TGAACAAATGTTGTAACAAG+AGG 0.541010 4.2:-42436362 None:intergenic
ATTGCCAATGAAGTAAAAGC+AGG 0.541196 4.2:+42437481 MS.gene004115:CDS
TGTTGCTCGTGTTAGTGCCA+TGG 0.543356 4.2:+42435573 MS.gene004115:CDS
TTGGCAATTGGTAAATCACC+AGG 0.544699 4.2:-42437466 None:intergenic
TCTTTAGGCACTGCAAAACC+TGG 0.545497 4.2:+42437448 MS.gene004115:CDS
CCTTGCAGCACCTCGAACCA+TGG 0.546871 4.2:-42435590 None:intergenic
ATCTAAGAAAGGCCAGAGAA+GGG 0.549986 4.2:+42437669 MS.gene004115:CDS
GAAAGGCCAGAGAAGGGGTA+AGG 0.550861 4.2:+42437675 MS.gene004115:CDS
CGTGTTAGTGCCATGGTTCG+AGG 0.554128 4.2:+42435580 MS.gene004115:CDS
GATTGCTTTGACGGAACTTG+CGG 0.554644 4.2:+42435352 MS.gene004115:CDS
TTATCAGGACCACTTTCAGA+TGG 0.555712 4.2:-42437625 None:intergenic
TCCCTCAGAAGAATGGATCA+TGG 0.557735 4.2:+42437777 MS.gene004115:CDS
TTGTTTAATGGACTTGTGAA+GGG 0.557946 4.2:+42435724 MS.gene004115:CDS
CATAACACTGTCAAGTTCGT+CGG 0.561412 4.2:-42435625 None:intergenic
AAGCTCTCCAAGCTCCTGGA+AGG 0.562089 4.2:+42440346 MS.gene004115:CDS
ACTTCCACAAAATCTAAGAA+AGG 0.564114 4.2:+42437658 MS.gene004115:CDS
TGTAGAAGCATTGGAAGGAA+AGG 0.567169 4.2:+42438970 MS.gene004115:CDS
CCAATGTACTCCAGCGCGAA+CGG 0.567999 4.2:-42435764 None:intergenic
TTAGCAAATCCATCTGAAAG+TGG 0.572366 4.2:+42437616 MS.gene004115:CDS
CCAGGACATTTGTGATCGCA+TGG 0.577916 4.2:+42437393 MS.gene004115:intron
CTAACACGAGCAACATAAGC+AGG 0.578723 4.2:-42435565 None:intergenic
AAAGAACGGAGTTGACGTGC+AGG 0.578778 4.2:+42438521 MS.gene004115:CDS
CAAGAAATGGATGGAGCTAG+TGG 0.585358 4.2:+42435670 MS.gene004115:CDS
TAGGTGAAAGGAAGGCTGGA+AGG 0.586646 4.2:+42435526 MS.gene004115:intron
CTAGCATCTCAATCATTGAT+GGG 0.589079 4.2:-42436385 None:intergenic
ATTTGCTAATGTATTTCCAG+TGG 0.589588 4.2:-42437602 None:intergenic
TGCAAGAATTGAATGGGCTG+GGG 0.592851 4.2:-42436187 None:intergenic
AAGCAGGGTATGATTCAAGC+AGG 0.595048 4.2:+42437497 MS.gene004115:CDS
TGAAGAAGCATATCAACCAT+AGG 0.596680 4.2:-42438392 None:intergenic
TTTGCAAAAGAAACTTGATG+AGG 0.603716 4.2:+42438054 MS.gene004115:CDS
AGCTCTCCAAGCTCCTGGAA+GGG 0.607044 4.2:+42440347 MS.gene004115:CDS
TCTTGAGGTGTAAAAGATGA+GGG 0.608610 4.2:-42436608 None:intergenic
GGATCAACTGAGAAATGAGA+TGG 0.608853 4.2:+42435124 MS.gene004115:intron
GATGCTAGATGCTGCTACTG+AGG 0.610729 4.2:+42436400 MS.gene004115:CDS
ATCTTGAGGTGTAAAAGATG+AGG 0.613240 4.2:-42436609 None:intergenic
GAGCACAACAAATTAAAGAA+CGG 0.615383 4.2:+42438507 MS.gene004115:CDS
AGTGATATGGCGAGTGATGG+TGG 0.615512 4.2:+42437532 MS.gene004115:CDS
AGAATTGATGTTGAATCAAG+GGG 0.617194 4.2:+42435259 MS.gene004115:CDS
TTGTGAAAAGAATGAATCCA+CGG 0.617587 4.2:-42435968 None:intergenic
TTTAATGGACTTGTGAAGGG+AGG 0.618607 4.2:+42435727 MS.gene004115:CDS
TCCAGTGATATGGCGAGTGA+TGG 0.621503 4.2:+42437529 MS.gene004115:CDS
GTTGGCTCAGAGTATTGTAA+CGG 0.631287 4.2:+42435229 MS.gene004115:CDS
TTGCCAATGAAGTAAAAGCA+GGG 0.631451 4.2:+42437482 MS.gene004115:CDS
GTGAAAGGAAGGCTGGAAGG+TGG 0.632225 4.2:+42435529 MS.gene004115:CDS
GCTTCTGGAGAGCAAAATGC+CGG 0.633423 4.2:+42441929 MS.gene004115:CDS
GCTGTTGTAGAAGCATTGGA+AGG 0.633896 4.2:+42438965 MS.gene004115:CDS
TCTAAGAAAGGCCAGAGAAG+GGG 0.639113 4.2:+42437670 MS.gene004115:CDS
ATGGTTCGAGGTGCTGCAAG+GGG 0.639892 4.2:+42435592 MS.gene004115:CDS
AATTTACTACAAGAAATGGA+TGG 0.641774 4.2:+42435661 MS.gene004115:CDS
TCAGAAGCGTGACAGAAGAG+AGG 0.645448 4.2:+42439212 MS.gene004115:CDS
CTCACTATAGTTCCAAGGCG+CGG 0.660395 4.2:-42435419 None:intergenic
AGGACCAAACGAAATAGACT+CGG 0.660752 4.2:-42438556 None:intergenic
TGTTGCTCAAAAGGAATCCG+TGG 0.667698 4.2:+42435951 MS.gene004115:CDS
ACTGAGGATGCTCTAGAACG+TGG 0.675489 4.2:+42436416 MS.gene004115:CDS
ATTTAGTCCAGATACCCTGA+AGG 0.677645 4.2:+42436335 MS.gene004115:intron
TGATACAGGGTCAGTCTCAG+CGG 0.681099 4.2:-42440185 None:intergenic
CCAATTGTACAGATTGACAG+AGG 0.688898 4.2:-42436649 None:intergenic
TTGCTGAAGAGATTAATGAG+AGG 0.692613 4.2:+42435312 MS.gene004115:CDS
GAGAAATGAGATGGTTGCTG+AGG 0.695502 4.2:+42435133 MS.gene004115:CDS
CAATTGTACAGATTGACAGA+GGG 0.701278 4.2:-42436648 None:intergenic
TAACAAAGCACACATATTTG+GGG 0.706670 4.2:+42436757 MS.gene004115:CDS
AATGGATGGAGCTAGTGGTG+TGG 0.751839 4.2:+42435675 MS.gene004115:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 42434310 42441989 42434310 ID=MS.gene004115
chr4.2 mRNA 42434310 42441989 42434310 ID=MS.gene004115.t1;Parent=MS.gene004115
chr4.2 exon 42434310 42434483 42434310 ID=MS.gene004115.t1.exon1;Parent=MS.gene004115.t1
chr4.2 CDS 42434310 42434483 42434310 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42435125 42435436 42435125 ID=MS.gene004115.t1.exon2;Parent=MS.gene004115.t1
chr4.2 CDS 42435125 42435436 42435125 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42435529 42435795 42435529 ID=MS.gene004115.t1.exon3;Parent=MS.gene004115.t1
chr4.2 CDS 42435529 42435795 42435529 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42435943 42435990 42435943 ID=MS.gene004115.t1.exon4;Parent=MS.gene004115.t1
chr4.2 CDS 42435943 42435990 42435943 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42436145 42436210 42436145 ID=MS.gene004115.t1.exon5;Parent=MS.gene004115.t1
chr4.2 CDS 42436145 42436210 42436145 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42436341 42436444 42436341 ID=MS.gene004115.t1.exon6;Parent=MS.gene004115.t1
chr4.2 CDS 42436341 42436444 42436341 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42436586 42436679 42436586 ID=MS.gene004115.t1.exon7;Parent=MS.gene004115.t1
chr4.2 CDS 42436586 42436679 42436586 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42436755 42436811 42436755 ID=MS.gene004115.t1.exon8;Parent=MS.gene004115.t1
chr4.2 CDS 42436755 42436811 42436755 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42437397 42437838 42437397 ID=MS.gene004115.t1.exon9;Parent=MS.gene004115.t1
chr4.2 CDS 42437397 42437838 42437397 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42437921 42438075 42437921 ID=MS.gene004115.t1.exon10;Parent=MS.gene004115.t1
chr4.2 CDS 42437921 42438075 42437921 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42438207 42438272 42438207 ID=MS.gene004115.t1.exon11;Parent=MS.gene004115.t1
chr4.2 CDS 42438207 42438272 42438207 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42438353 42438421 42438353 ID=MS.gene004115.t1.exon12;Parent=MS.gene004115.t1
chr4.2 CDS 42438353 42438421 42438353 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42438504 42438596 42438504 ID=MS.gene004115.t1.exon13;Parent=MS.gene004115.t1
chr4.2 CDS 42438504 42438596 42438504 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42438926 42438991 42438926 ID=MS.gene004115.t1.exon14;Parent=MS.gene004115.t1
chr4.2 CDS 42438926 42438991 42438926 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42439187 42439233 42439187 ID=MS.gene004115.t1.exon15;Parent=MS.gene004115.t1
chr4.2 CDS 42439187 42439233 42439187 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42439325 42439388 42439325 ID=MS.gene004115.t1.exon16;Parent=MS.gene004115.t1
chr4.2 CDS 42439325 42439388 42439325 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42440166 42440243 42440166 ID=MS.gene004115.t1.exon17;Parent=MS.gene004115.t1
chr4.2 CDS 42440166 42440243 42440166 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42440336 42440398 42440336 ID=MS.gene004115.t1.exon18;Parent=MS.gene004115.t1
chr4.2 CDS 42440336 42440398 42440336 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42441155 42441247 42441155 ID=MS.gene004115.t1.exon19;Parent=MS.gene004115.t1
chr4.2 CDS 42441155 42441247 42441155 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
chr4.2 exon 42441888 42441989 42441888 ID=MS.gene004115.t1.exon20;Parent=MS.gene004115.t1
chr4.2 CDS 42441888 42441989 42441888 ID=cds.MS.gene004115.t1;Parent=MS.gene004115.t1
Gene Sequence

>MS.gene004115

ATGGACGACGAATTGCTCGAATTGCAGCGACAATTCGAGTTCGCTCAACAAGCAAAATCCAGTATTCGATTATCCGATCGAAACGTCGTTGAATTAGTTCAAAAATTGCAACAACTTCAATTCATTGATTTTGAGCTTCTTCATACTGCTTCTGGCAAAGAATACATCACTCTCGTAACGCTCTATGCTTCATTTTCGTCTTTTTTTTTATTAGGTTTTGTAGTTTGAAGTTTTAACCAATTTGATAATTGATTGTTGATAATCGGTTTTGTTTTGTTGCTTTTTTTAGTTGATTCACTGTGTTATAATTTATCTTAATTTTGTTTTGTTTACGCGATCATGATTATTGTTAGGATCAACTGAGAAATGAATTTGTGACTGAGGTGAAGAAATTAGGCCGAATTTAATGGATGATCGATTATATTTTCTTACGTTTGACGTAATTTACTGTGTCTTCATTGATTTTAAGTAAGTGCTTGTTTACACGATGGATTATACTGTTAGGATCAACTGAGATGTTGCCGAGGTGAAGAAATTAGGATGTAATTAAAAGATTGGATAATCAATTATGTTTTTGTGCTTTTTACTTCATTCACTGTGTTATAAACTTATAATTGACAATCAATTATATTCTCTTGCTTTTTACTTAATTCACTGTGTTATAATTGATCTTAATCAAGTGTTTGTTTAGCCGCTTGAGTTTTTAACAGATTTGATAATTGATAATCGATTTTGTTTTGTTTCTTTTTGCTTAATTACTGTGTTATAAGTGATCTAAATTAAGTGTTTGTATATGTGATTGATTGTGCTGTTAGGATCAACTGAGAAATGAGATGGTTGCTGAGGTGAAGAAGTTAGGGCGAATTTCTGTGATCGATCTTGCTGATGTTACTGGAGTTGACTTGTACTATGTTGAGAAGTTGGCTCAGAGTATTGTAACGGATCACGCAGAATTGATGTTGAATCAAGGGGAAATTATTACGGAGTCTTACTGGGATTCCATTGCTGAAGAGATTAATGAGAGGCTTCAAGAATGTAGTCAGATTGCTTTGACGGAACTTGCGGCGCAGTTGAATGTTGGTTTGGATTTGATTGCATCTATTTTGGAGCCGCGCCTTGGAACTATAGTGAGTTTTTTTTTTTTTTTGTGTTGGTTTGGATGTGTTTTTGGAATGATAAATGAAAATTGTGATTTCATATGTGATGGTTTTGAAAATAGGTGAAAGGAAGGCTGGAAGGTGGACAATTGTATACTCCTGCTTATGTTGCTCGTGTTAGTGCCATGGTTCGAGGTGCTGCAAGGGGTATTACGGTTCCGACGAACTTGACAGTGTTATGGAGCTCATTGCAGAATTTACTACAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGCGAGATTTTAGGGTCCGTTCGCGCTGGAGTACATTGGACACCAGCTGTGAGTGACATGATACGGCATAGATTTGATATTGTTAAATTGATGCCTAAATTTTATGGTTTTCATATTTGAGTTAGGCCTTTGGAGTGGCTTACTTCATAGCAATTGTCAGAAGTTGTTTATTGTGTTTTTTATGTCACATGATAGGTATTTGCTGTTGCTCAAAAGGAATCCGTGGATTCATTCTTTTCACAAGTATGAACTCTCTCTTCCCTTGTCTTTCACTTTTGCTTAAGATGCCAAACATTTCGCCTAGTTCTAGCTTATGATCAACTGCTTTGAGCTCGGTAACTGCCATTATAAGTTTAAAAGGACATGCATACTAAACTGCTGTGTTTGTGTGCTTTAGAATTCTTTTATCAGCTACGACGTTCTGCAAAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGGTAACTAAGTTGTTCTTATGTTGATTCTATTTCCAAATGATAACCATTTGGATCATATGTAGATATATGTGAAATAAATATTTTGTACTAGTTTTCATAATGAAGCCTAAGTTTGCACAATCCAATTTAGTCCAGATACCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCACCCATCAATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTCTAGAACGTGGAAGCTGGTAAGGGCATTAGCATAACCCCCACCCCCTAATGCTGTGCAAGGGATCTCTTGACATTATTTACAGAAGTTGTTGTTAGTTATATGTTGGATGTTTTTCAATGCATCATATCCTTGCTGATATAATTTAATAATGTTGCAGGAGTGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCTCAAGATGCATCTAAAATGTTGTCCCTCTGTCAATCTGTACAATTGGCACTTAAGGTGAAACTAATCACCTCATTAATTTATGCTTCGCACAGTTGATTCACATGTTGATAAACTTCCCATTTTTTGCAGTCTAACAAAGCACACATATTTGGGGACTTTTATGTGCTGAGCAGCAGCTTTATGAAGGTTTGTTGTTGAATTTATTGTAGCCATATAGACCTCAAGATAAATGAATTAATTCTACAAGCCATATTACTGATTTTGTGGTGCAAATGGTGCTACTAAGGCTCGGTTTGAATATTTGTTTAGAAGATTCAGTTAATAAACATGATTTGTACGGTAGTGTAGTCATCGTGAACAAAAAAATTATGCTATTTATATTATGAGTTTTGCTCATAATAGATTCAGAAGTGCTGAATCAATAGTACATCAAATTACTGCCATGGTCATCAACTAAGCATTCCATAGCTACATTGACAACTCAAAAGAAAAGTGATGATATAAATTGACTGCAGTGTCATGTAATATGCAGAACTGTTGTATTAGATCCTTCATTAATATGCATGCATCCTGCTGGGGTTTATCTTCCTTTCCTATTATTTATTTCCTCACTACATCCAGCTTTTGGTTTCTTTATCTTCTTTTCTTTATTACTTAAGATCCAACTGCCAAGAATTAAGTTACCGTTGGGTAAAAAATGTCTACCTGCAACTATTCTTTTTACCATTGGTTTCCTAATGCATGTATGGTTCTCTGCCCCCCTTCTACCAGGACATTTGTGATCGCATGGTGAAAGAATTAGAGACATTAGCTGTTTCAAGGTCTTTAGGCACTGCAAAACCTGGTGATTTACCAATTGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGTGATATGGCGAGTGATGGTGGTTCAAACAAGCATGCTGATAAAGGGCCAAAGAAGAAAAAAGGGAAAGCCACTGGAAATACATTAGCAAATCCATCTGAAAGTGGTCCTGATAACCAAGAACATACTTCCACAAAATCTAAGAAAGGCCAGAGAAGGGGTAAGGATACATCTTCACAAACATCTGATTCAAAGCCAGGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATAATCTCAGTAATCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCATTGATTCCTGATTTTGAAGAACAAGGTCTGCTATGAATGACTTTGGGTCTATTCTTCCTGCATATGATTTTATCTAAGTTCTTGAACTGTGTGCTATAAATTGACAGGTATTGATGATCCCGAAACGATTCTTAGGCCTTTGGCTAACAAATTAAGGCCTACAATAATCGGTACTTGGATGGAGAAAAAGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAGTTTGCAAAAGAAACTTGATGAGGTTTGACTGCTATGTAGTATCTTTTGTATTTTCTACATCCGTTGTGTCCATGTATATAACTCTTACTCTTATTCTTTCCTTAAAAGATACTCATCTGAACATGTCCTTGTGTTGATTTGTTTTTTTGGCAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTAAGTCAAGTTAATTGAAATTTGAAGATGTTATTTTCATTGATGAAATATGAGTAAATTAATGTGTTTTTGATGCCCAGGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGTATTATATACAGCGAGTTTTCTGTTGATGTTTCTCGAGGTTTAGTAAAGGTCTAAAAACGATATGGATTCAACCTTTGCAGGATGAGCACAACAAATTAAAGAACGGAGTTGACGTGCAGGAATCTCCAAAGTCCGAGTCTATTTCGTTTGGTCCTGGAGAAAGAGCTGCAATTGTAAGACTTGAGAGGAAAATATGAAACGAGAATACTCAGCAGTGTGATATTTATAATCAAAATAATTACAATTTACAGAAGTGTAATTAAAACTAACATAATTTAGTAAGATACAATGAATCCTATGATGCAACGAAGTTTAATGCTACTTAGAATGTGGAACAATAATTACATTATGTTTCCAACAGTAAGAATAGTGCATTATTTGGAAAGTTATGCTTTATGTTCTTATGTTTTTAGTGTATCAAACCATAGACCAGTCTCATATTTGCAGTCTATCTTCTTTTGTGAGGAGCACATAAAATGACTTAAAATACTTTTTTTTGCAGTCCAAGAGTTTTCCCAGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGGTTAGCATTTTTATTTCTGAAACAGTTCTTTGATAAGGGTTGCTCAGATTATGGTTAAGGCTTATTGTATAGGTTTTACTCAATTCACCATTCCAACTGGTTGAGTTGAAATATCTTGTTGTAGCTCGAAATTTAATATTTCCGTTTGACTCTTGAATGCTGTAAACTAATATTTGAATATTCAATATTTTATAGAGTGTGGAAACATTCATGTCTGCATTCAGAAGCGTGACAGAAGAGAGGTAATAATGTGTTTTCTTTTGTTAGTATAACTTGATAGCGTTGCTTTTGACATAGCCCTGACGTGAAACCTCATGTGATTAATTTTTCCAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACAATTTTACATTCATATCGGAAGGTATTTATGCTTGAATTTCTGTTAAAATTTACAAGAACTTATTTGAGGTTAGATTCACAGAGACATTGTTAGATGATGCTGGTTCTGGCACTGAGATTATCTGTTTGGTAAAACTATAAAATAACAGTAAGATATGTGACTGAATTTGTTCTTTTACAACAATTGTAAGATAGAACCATTTCCACTCAACTCAAATAGTGATGGAGCCCAGCTCCTTTCACCGAATCTGTTCTGCGAAAAAGCAATGCTAATAAAATAGACACAAAAGACCATACCACAACAATACAAATGAACAATTGGCTTGATACCAGACACACTGTCAGCCCTTTTCCCCAGCCAATGACTTTTCTAGTATTCCTCTAATCTTGCTGCTCGTCTATAACCTTTTCCCCACTTCTATACTAACTTAAAGAGTTATAAGAACAATCTGATCGGTAAGTTATTAATTACACGTTCTGATTGGTTAGCTATCAGTTAACAATCTGACCAGTTAGTTATAAGAACAATCTAACACGGGAAACTACTAAGTGGGAGTTTATGGTAAAATAATCAAGCTAGTGTTTGCTTTACCGTTAAACATATTTAAACATTTATTTGGTATTCTTTTCAGTTTCATTTAGTTCTAATATCAGATATTTGTCAAGATTTCTTAAATTGTAATTCTCCTGAATATTAGCAGCAAGCCAACTCCACACGAAACTTTTGGTTGTTTTTGCAATGTTACTCTGCAATTCGGATGATCTTAAACTTTTTGTCTTCTATCATTGTTATTATCAGGAATTGACGTCTCAAGTATCCGCTGAGACTGACCCTGTATCACTTCTACCAAAAGTTGTGTCTTTACTCTATGTCCAGGTAACTTGAGTGCTACTCCACCCCCATCAAACAAAAACAAAAAAAAAAAAAACTTTTATCCTCATTTTAAAAAGTGATATTTGTATTAATAGGTTTACCATAAAGCTCTCCAAGCTCCTGGAAGGGCCATTTCTGTTGCTATTTCTCACTTGCAGGTATGTTCTATATGTCCAATGGTTCAGTTATGCATCATGATATAATATAACTGAAATAATAGTAATTACACAAACCAAACCAAGTATTACTACTGACATGGTCACCAAATACATAGGTTATCCATTGTCTATTAATTTTTCCTGTTGACAGTAAGTTTTAAAAAATTATGTTGAAGCAAGAAATAAACAGTGATGCCAAGTATATATCCATTGTAATTGAAATATGATCTGCTGTTGATATCTGACTAAGATATGAGGTGGTTGGTGTTCAAATATCTCACAGACAGAGCATAGATCCTTTATCTGAGCTCAATCTTTCCCATATTACACTTGAATGGTTGGATAATGTAAAGCTAGTATTCACGACTCTTCTATGTTGCATTTAACCATCTAGGATTTCACATTTTCAAATTCAACACATTTTTATGTTTTAGTGCTAAACACTAACGTCTTTCTTAACTTGTAACACCTATACTGCTATACATCACGTGCAATATGAATATTTTAGACCCATTTATGCACTAACATTCATGTGACATGAAAACCAAGAAAATTTAATTCTCTGGGATTCCAGCAAGAACAATGAATAATTAGGACTGAAAAACTAGCAATAATATATTTAACTTTTATCAAAAGCTGAATATCTTTGGGCATCTAAAGGGGTTAACGAAGCCCAAGTCTTATTTCCATAAAATATTGTACAAAAACATATTTGTTAACTTTTTTCGTATTTTGATTTCACATTTTATTTGTCAGGATAAGCTAGACGAGTCAGCATGCAAGACTTTAGCTGATTATCAAACTGCTACTGTGACTCTTTTGGCACTATTATCAGCTGCTCCTGATGATGTGAGTAATTTTTATTCATGCATTATTCATATGTACATGTCATTAATTTTGATCCAGCAGAAGTTTGATCACTCCTCTCTAAAATATTAAAGTAACGCAAGCTATGTTTTAAATTGTTTCCTGTTAAGTTCTAGATGTGCAACTATAAAAAAATGACTGGGATTCTTTTCTACCATTTCGTACATCAATTGGCAAATGCATTCATATAATATTGAAATTTCTCGAGCAATTTTTCCAATGTCTTCATTGAATAGCTAGATAAAAAAATTCCAATTTCATGTGAACTCTTTTGCATTAGCTTTTTAAAAAAAATAAAAAAAAAAGTAACGTGATATATGATATATTTGAGGTTAATGGGGTGTGATATATTCGTTCAATTCAATAGTTAGAAGATTATTTTGAGTAGCACTTCGGTGCCATTAATAGCACGGTGCCATTAATTTTGGTCCATAGGATCTTGTGCCATTGCATTTGGTCCATAGGATCTTGTAAACATAAACCCTCCCTGCACATGTGTCAAAATTTTATTGGCTCTATGCACAATGGTACCGTGACATTATGTCACTGAAGATTTTCCCGATTATTTCAAATAATTGGGTAGGCATAGATTGTAAACTATTCCTCTTTTTCCGTTGTGCAGGAAGACAGTTGTGCATCTGACAGAGTTCTGAGTACAAGAGAGCTTCTGGAGAGCAAAATGCCGGCTCTCAAAAGCTTGGTTTTGACTACCTCGCAGTCCTAA

Protein sequence

>MS.gene004115.t1

MDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQFIDFELLHTASGKEYITLDQLRNEMVAEVKKLGRISVIDLADVTGVDLYYVEKLAQSIVTDHAELMLNQGEIITESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLIASILEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDALERGSWSDSLSLLPSSFTPQDASKMLSLCQSVQLALKSNKAHIFGDFYVLSSSFMKDICDRMVKELETLAVSRSLGTAKPGDLPIANEVKAGYDSSRLSESSDMASDGGSNKHADKGPKKKKGKATGNTLANPSESGPDNQEHTSTKSKKGQRRGKDTSSQTSDSKPGSRKESLKMKEDNLSNPSEEWIMEKITALIPDFEEQGIDDPETILRPLANKLRPTIIGTWMEKKKALFKDNAERMKQLLDSLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVDVQESPKSESISFGPGERAAISKSFPRALANKALAVVEALEGKSVETFMSAFRSVTEESGLPLKKLDKKLERTILHSYRKELTSQVSAETDPVSLLPKVVSLLYVQVYHKALQAPGRAISVAISHLQDKLDESACKTLADYQTATVTLLALLSAAPDDEDSCASDRVLSTRELLESKMPALKSLVLTTSQS