Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28818.t1 | XP_024627015.1 | 93.1 | 566 | 39 | 0 | 1 | 566 | 1 | 566 | 3.10E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28818.t1 | A0A396HDQ3 | 93.1 | 566 | 39 | 0 | 1 | 566 | 1 | 566 | 2.2e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28818 | MS.gene64646 | PPI |
| MS.gene28818 | MS.gene004115 | PPI |
| MS.gene28818 | MS.gene67388 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28818.t1 | AT2G47350 | 43.783 | 571 | 219 | 20 | 1 | 559 | 1 | 481 | 4.76e-114 | 348 |
| MS.gene28818.t1 | AT1G56460 | 41.105 | 579 | 243 | 17 | 1 | 558 | 1 | 502 | 1.20e-90 | 288 |
| MS.gene28818.t1 | AT1G56460 | 39.174 | 605 | 248 | 17 | 1 | 558 | 1 | 532 | 5.88e-86 | 276 |
| MS.gene28818.t1 | AT3G06660 | 43.202 | 456 | 189 | 15 | 109 | 559 | 29 | 419 | 2.04e-65 | 219 |
| MS.gene28818.t1 | AT1G56460 | 38.817 | 541 | 233 | 17 | 1 | 520 | 1 | 464 | 5.66e-62 | 213 |
| MS.gene28818.t1 | AT2G47350 | 38.126 | 459 | 183 | 19 | 1 | 447 | 1 | 370 | 1.59e-54 | 189 |
Find 150 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTAGATGTGTTCTTTA+TGG | 0.097216 | 7.4:-5817757 | None:intergenic |
| TTCGAAAAGCTCTCGTTTAT+CGG | 0.231676 | 7.4:+5817021 | MS.gene28818:CDS |
| ACTCTCTAGCGTCTCTAATA+TGG | 0.265515 | 7.4:+5817956 | MS.gene28818:CDS |
| GATTTCAAAAGGGGCGGATT+TGG | 0.281044 | 7.4:+5817699 | MS.gene28818:CDS |
| GTGTTCTTGCTCCTGCTAAT+TGG | 0.295171 | 7.4:+5816780 | MS.gene28818:CDS |
| TTTGAATCCCGGTATTTATA+CGG | 0.300042 | 7.4:-5819403 | None:intergenic |
| GAATCCTGAGAGTACAAGTT+TGG | 0.340010 | 7.4:+5816874 | MS.gene28818:CDS |
| ACAGAATTACCAGTTGCTTT+TGG | 0.346994 | 7.4:-5817060 | None:intergenic |
| TCTGCATCTAACAGTGCTTC+AGG | 0.354010 | 7.4:+5816986 | MS.gene28818:CDS |
| AAACCTGTGCCAGATCTTCT+TGG | 0.361784 | 7.4:-5818610 | None:intergenic |
| TATGAGGATGAAGTGGAATC+AGG | 0.367393 | 7.4:+5818056 | MS.gene28818:CDS |
| GGTTAAGAAGGTTAAACTTA+AGG | 0.369997 | 7.4:+5816931 | MS.gene28818:CDS |
| GCCGTGGCCTGCGCGATGGT+TGG | 0.370228 | 7.4:-5816535 | None:intergenic |
| CCTTCCACGGAAGGCCTTTG+AGG | 0.388383 | 7.4:-5817677 | None:intergenic |
| AATCCTGAGAGTACAAGTTT+GGG | 0.390497 | 7.4:+5816875 | MS.gene28818:CDS |
| GACTCTTACAACACGTCAAC+GGG | 0.393685 | 7.4:+5818163 | MS.gene28818:CDS |
| GGGCAGCTTCAAGATGGATT+GGG | 0.397967 | 7.4:+5816896 | MS.gene28818:CDS |
| AAAGGGGCGGATTTGGTGTC+GGG | 0.399013 | 7.4:+5817706 | MS.gene28818:CDS |
| ATGGATTGGGGAGTGAGAAC+AGG | 0.411464 | 7.4:+5816909 | MS.gene28818:CDS |
| TTAGGATCTACCCGGTTTGA+TGG | 0.419286 | 7.4:+5816482 | MS.gene28818:CDS |
| CGTCAACGGGCCCTTCAATC+AGG | 0.423589 | 7.4:+5818176 | MS.gene28818:CDS |
| TTCCGTGGAAGGATTTCAAA+AGG | 0.429035 | 7.4:+5817688 | MS.gene28818:CDS |
| TTGTGTTACTCAACCATCTT+CGG | 0.429757 | 7.4:+5816715 | MS.gene28818:CDS |
| AAAGAAGCGCCAAGAAGATC+TGG | 0.434910 | 7.4:+5818601 | MS.gene28818:CDS |
| GGCTTGGTGTTTATAATCGC+AGG | 0.439814 | 7.4:-5818814 | None:intergenic |
| ATCATCATCAACACCTCCTT+CGG | 0.442031 | 7.4:+5816604 | MS.gene28818:CDS |
| TCCATCCAGTACACGTCGCT+TGG | 0.442077 | 7.4:-5817823 | None:intergenic |
| AGTACCCAAGCGACGTGTAC+TGG | 0.443147 | 7.4:+5817818 | MS.gene28818:CDS |
| CGACCTTCAGGATCAGGAAT+AGG | 0.445884 | 7.4:-5816569 | None:intergenic |
| TCAGGAATAGGCTGTGAATC+AGG | 0.447013 | 7.4:-5816557 | None:intergenic |
| AGGCATCTTTGCCTGATTGA+AGG | 0.450821 | 7.4:-5818187 | None:intergenic |
| AAATCACGACCTTCAGGATC+AGG | 0.453077 | 7.4:-5816575 | None:intergenic |
| CCTGGACAGCCTTGTAGCAT+TGG | 0.453944 | 7.4:-5819450 | None:intergenic |
| ACTCTCTTGCTCTTACGAAC+AGG | 0.456564 | 7.4:-5817798 | None:intergenic |
| CATTGCTGATACCATCAAAC+CGG | 0.457258 | 7.4:-5816493 | None:intergenic |
| GCTGTCCAGGCGAAGACTAC+TGG | 0.457917 | 7.4:+5819463 | MS.gene28818:CDS |
| AGATATGTGATAGGTCCTAC+TGG | 0.459612 | 7.4:+5818757 | MS.gene28818:CDS |
| GTACAAATCCGTATAAATAC+CGG | 0.462269 | 7.4:+5819395 | MS.gene28818:CDS |
| CTTGCTCCTGCTAATTGGAA+AGG | 0.463533 | 7.4:+5816785 | MS.gene28818:CDS |
| CTAGAACCTTTCCAATTAGC+AGG | 0.466538 | 7.4:-5816791 | None:intergenic |
| CGCAGGGATCCCCATTTCCT+CGG | 0.468162 | 7.4:-5818797 | None:intergenic |
| TACTCACTTCTAGGTGGGGC+AGG | 0.469584 | 7.4:-5818254 | None:intergenic |
| GGGGCAGCTTCAAGATGGAT+TGG | 0.471719 | 7.4:+5816895 | MS.gene28818:CDS |
| TTATAAACACCAAGCCCATC+AGG | 0.472848 | 7.4:+5818821 | MS.gene28818:CDS |
| GCCAACCATCGCGCAGGCCA+CGG | 0.474733 | 7.4:+5816534 | MS.gene28818:CDS |
| AAGAAGGTTAAACTTAAGGT+TGG | 0.476721 | 7.4:+5816935 | MS.gene28818:CDS |
| GAAGTGGAATCAGGGTCTGC+TGG | 0.477090 | 7.4:+5818065 | MS.gene28818:CDS |
| GGAATCTGTTGATGTATTGA+TGG | 0.477592 | 7.4:+5818124 | MS.gene28818:CDS |
| CCATCCAGTACACGTCGCTT+GGG | 0.482402 | 7.4:-5817822 | None:intergenic |
| GAGTGAGAACAGGGTTAAGA+AGG | 0.483255 | 7.4:+5816919 | MS.gene28818:CDS |
| TTTCACCAGTAGTCTTCGCC+TGG | 0.489617 | 7.4:-5819468 | None:intergenic |
| AAAAGGGGCGGATTTGGTGT+CGG | 0.491074 | 7.4:+5817705 | MS.gene28818:CDS |
| GGCATCTTTGCCTGATTGAA+GGG | 0.492951 | 7.4:-5818186 | None:intergenic |
| TCTAACAGTGCTTCAGGAAG+CGG | 0.493879 | 7.4:+5816992 | MS.gene28818:CDS |
| CAGACCGCGCCAAAAGCAAC+TGG | 0.496603 | 7.4:+5817051 | MS.gene28818:CDS |
| CCAATGCTACAAGGCTGTCC+AGG | 0.496964 | 7.4:+5819450 | MS.gene28818:CDS |
| GCAATGCTGTGAGGAGGAAG+AGG | 0.500162 | 7.4:+5816510 | MS.gene28818:CDS |
| AAGGTTAAACTTAAGGTTGG+TGG | 0.500297 | 7.4:+5816938 | MS.gene28818:CDS |
| TCATCAAGGTCAGGCAAAGA+TGG | 0.509231 | 7.4:+5817990 | MS.gene28818:CDS |
| GCTTGAAGATACAGATTATG+AGG | 0.510025 | 7.4:+5818040 | MS.gene28818:CDS |
| TTATACGGATTTGTACATGA+TGG | 0.510873 | 7.4:-5819388 | None:intergenic |
| GACAGCAGCTCCTCTTCTGT+AGG | 0.513010 | 7.4:-5818354 | None:intergenic |
| AATGATGGTTATGATAATAC+TGG | 0.513052 | 7.4:+5816662 | MS.gene28818:CDS |
| AGCTTGATACCTGATGGGCT+TGG | 0.515448 | 7.4:-5818830 | None:intergenic |
| ATGTATTGATGGACACTAAG+AGG | 0.516625 | 7.4:+5818135 | MS.gene28818:CDS |
| TGCCCCAAACTTGTACTCTC+AGG | 0.517224 | 7.4:-5816878 | None:intergenic |
| CCTCAAAGGCCTTCCGTGGA+AGG | 0.517260 | 7.4:+5817677 | MS.gene28818:CDS |
| GAGACTGCAAAGAGGAACCT+TGG | 0.517832 | 7.4:-5819428 | None:intergenic |
| TTATCAGCAGCTTCCTCCGA+AGG | 0.522047 | 7.4:-5816620 | None:intergenic |
| TTTACGCCTAATGGCAGCCT+CGG | 0.523022 | 7.4:-5818385 | None:intergenic |
| CTCCGTCCACTAGCCGAAGA+TGG | 0.525607 | 7.4:-5816728 | None:intergenic |
| AATACCATCAGATATGTGAT+AGG | 0.526976 | 7.4:+5818748 | MS.gene28818:CDS |
| GCAAGTTGAGAAGGCTGCTA+GGG | 0.527308 | 7.4:+5818410 | MS.gene28818:CDS |
| GCGTAAAATGCAAGTTGAGA+AGG | 0.527598 | 7.4:+5818401 | MS.gene28818:CDS |
| AGTTTGGGGCAGCTTCAAGA+TGG | 0.531243 | 7.4:+5816890 | MS.gene28818:CDS |
| TCCGTGGAAGGATTTCAAAA+GGG | 0.531352 | 7.4:+5817689 | MS.gene28818:CDS |
| GCTAAGAAGCGAGGCCTCAA+AGG | 0.533528 | 7.4:+5817663 | MS.gene28818:CDS |
| CCACCTCACGAGAAGTGTGC+TGG | 0.536074 | 7.4:+5819364 | MS.gene28818:CDS |
| AATGCTGCCTCATCAAGGTC+AGG | 0.537706 | 7.4:+5817981 | MS.gene28818:CDS |
| CAATATACTCACTTCTAGGT+GGG | 0.538644 | 7.4:-5818259 | None:intergenic |
| AGGCCTCGCTTCTTAGCAGA+CGG | 0.539987 | 7.4:-5817657 | None:intergenic |
| AAAAGAGAAGCCTACAGAAG+AGG | 0.541543 | 7.4:+5818344 | MS.gene28818:CDS |
| GCAGGGATCCCCATTTCCTC+GGG | 0.542465 | 7.4:-5818796 | None:intergenic |
| TACAGATTATGAGGATGAAG+TGG | 0.546851 | 7.4:+5818049 | MS.gene28818:CDS |
| TGGATTGGGGAGTGAGAACA+GGG | 0.547165 | 7.4:+5816910 | MS.gene28818:CDS |
| TACTTGGTCAAGATTCTAGC+AGG | 0.548008 | 7.4:+5818558 | MS.gene28818:CDS |
| TTGCAGTCTCCAATGCTACA+AGG | 0.548799 | 7.4:+5819441 | MS.gene28818:CDS |
| GGGGCAGGAGGTAATCCATT+GGG | 0.549140 | 7.4:-5818239 | None:intergenic |
| AATAATAGACGGAGCAGTGA+AGG | 0.554175 | 7.4:+5816758 | MS.gene28818:CDS |
| GGGAAGGAAGAGACGTCGAT+GGG | 0.560352 | 7.4:+5817726 | MS.gene28818:CDS |
| TGCAAGTTGAGAAGGCTGCT+AGG | 0.561618 | 7.4:+5818409 | MS.gene28818:CDS |
| ATGCTGATATATTTGGTGGA+AGG | 0.565650 | 7.4:+5816852 | MS.gene28818:CDS |
| AGAGGAGCCAACCATCGCGC+AGG | 0.566100 | 7.4:+5816528 | MS.gene28818:CDS |
| GGGCGGATTTGGTGTCGGGA+AGG | 0.568133 | 7.4:+5817710 | MS.gene28818:CDS |
| GCACACTTCTCGTGAGGTGG+AGG | 0.568490 | 7.4:-5819361 | None:intergenic |
| AAGAACACATCTAGCAAGCA+AGG | 0.568724 | 7.4:+5817762 | MS.gene28818:CDS |
| GTTTCTAGTGATGAGAATGA+TGG | 0.569956 | 7.4:+5816647 | MS.gene28818:CDS |
| TGACAAATGACAACATCAGC+TGG | 0.570935 | 7.4:-5819494 | None:intergenic |
| ATCTTTGCCTGACCTTGATG+AGG | 0.571415 | 7.4:-5817988 | None:intergenic |
| ATGAGGATGAAGTGGAATCA+GGG | 0.574164 | 7.4:+5818057 | MS.gene28818:CDS |
| AGAAAACCGAGGCTGCCATT+AGG | 0.578455 | 7.4:+5818379 | MS.gene28818:CDS |
| ACTCAACCATCTTCGGCTAG+TGG | 0.578820 | 7.4:+5816722 | MS.gene28818:CDS |
| AGGATAGCTTGATACCTGAT+GGG | 0.578873 | 7.4:-5818835 | None:intergenic |
| TGGACAATGCTGCCTCATCA+AGG | 0.579403 | 7.4:+5817976 | MS.gene28818:CDS |
| CCCAAGCGACGTGTACTGGA+TGG | 0.579720 | 7.4:+5817822 | MS.gene28818:CDS |
| AGTTTAATCGAGTTTCCCAA+TGG | 0.580476 | 7.4:+5818224 | MS.gene28818:CDS |
| GGCAGCTTCAAGATGGATTG+GGG | 0.581310 | 7.4:+5816897 | MS.gene28818:CDS |
| CCGTGGAAGGATTTCAAAAG+GGG | 0.581364 | 7.4:+5817690 | MS.gene28818:CDS |
| AAAAGCTCTCGTTTATCGGA+CGG | 0.583457 | 7.4:+5817025 | MS.gene28818:CDS |
| CGGGAAGGAAGAGACGTCGA+TGG | 0.584552 | 7.4:+5817725 | MS.gene28818:CDS |
| TGACTCTTACAACACGTCAA+CGG | 0.584588 | 7.4:+5818162 | MS.gene28818:CDS |
| CCAGCACACTTCTCGTGAGG+TGG | 0.585545 | 7.4:-5819364 | None:intergenic |
| ATAGGCTGTGAATCAGGCCG+TGG | 0.585794 | 7.4:-5816551 | None:intergenic |
| ATGATGCTGATGATGAGATT+CGG | 0.588715 | 7.4:+5817856 | MS.gene28818:CDS |
| AGGACCTATCACATATCTGA+TGG | 0.590688 | 7.4:-5818752 | None:intergenic |
| GAGATGAAGAAGAATCAAGC+AGG | 0.591792 | 7.4:+5817922 | MS.gene28818:CDS |
| AGGGTCTGCTGGAGAGCAAG+AGG | 0.591977 | 7.4:+5818076 | MS.gene28818:CDS |
| TCAGGCCGTGGCCTGCGCGA+TGG | 0.593205 | 7.4:-5816539 | None:intergenic |
| AACCATCTTCGGCTAGTGGA+CGG | 0.593376 | 7.4:+5816726 | MS.gene28818:CDS |
| TAAACTTGCATTAGATGCAG+AGG | 0.593422 | 7.4:-5818207 | None:intergenic |
| TGGGGCAGGAGGTAATCCAT+TGG | 0.599381 | 7.4:-5818240 | None:intergenic |
| CAGCCTATTCCTGATCCTGA+AGG | 0.600249 | 7.4:+5816566 | MS.gene28818:CDS |
| TGGAAGGATTTCAAAAGGGG+CGG | 0.606104 | 7.4:+5817693 | MS.gene28818:CDS |
| TGTATTGATGGACACTAAGA+GGG | 0.606879 | 7.4:+5818136 | MS.gene28818:CDS |
| GCGCCAAGAAGATCTGGCAC+AGG | 0.611439 | 7.4:+5818607 | MS.gene28818:CDS |
| GAAGGCTGCTAGGGAATCTG+AGG | 0.612819 | 7.4:+5818419 | MS.gene28818:CDS |
| TCAGCAGCTTCCTCCGAAGG+AGG | 0.613860 | 7.4:-5816617 | None:intergenic |
| TACAAATCCGTATAAATACC+GGG | 0.613891 | 7.4:+5819396 | MS.gene28818:CDS |
| ATCATCAACACCTCCTTCGG+AGG | 0.618324 | 7.4:+5816607 | MS.gene28818:CDS |
| GGAGTAGTTTAAATAATAGA+CGG | 0.619459 | 7.4:+5816747 | MS.gene28818:CDS |
| TGGAAGATTTAGGATCTACC+CGG | 0.621580 | 7.4:+5816474 | MS.gene28818:CDS |
| GAGGCCTCAAAGGCCTTCCG+TGG | 0.622312 | 7.4:+5817673 | MS.gene28818:CDS |
| AATATACTCACTTCTAGGTG+GGG | 0.622996 | 7.4:-5818258 | None:intergenic |
| GAAGGAGGTGTTGATGATGA+TGG | 0.623293 | 7.4:-5816602 | None:intergenic |
| GCTTGGTGTTTATAATCGCA+GGG | 0.625642 | 7.4:-5818813 | None:intergenic |
| ACAATATACTCACTTCTAGG+TGG | 0.626612 | 7.4:-5818260 | None:intergenic |
| GATATGTGATAGGTCCTACT+GGG | 0.638043 | 7.4:+5818758 | MS.gene28818:CDS |
| TCACTTCTAGGTGGGGCAGG+AGG | 0.639183 | 7.4:-5818251 | None:intergenic |
| GATAGGTCCTACTGGGACAG+TGG | 0.650564 | 7.4:+5818765 | MS.gene28818:CDS |
| TCTCCGTCTGCTAAGAAGCG+AGG | 0.650811 | 7.4:+5817654 | MS.gene28818:CDS |
| AAAGTCACCACTGTCCCAGT+AGG | 0.661585 | 7.4:-5818772 | None:intergenic |
| ATTGCTGATACCATCAAACC+GGG | 0.666876 | 7.4:-5816492 | None:intergenic |
| GTATCAGCAATGCTGTGAGG+AGG | 0.670655 | 7.4:+5816504 | MS.gene28818:CDS |
| GGAAGGAAGAGACGTCGATG+GGG | 0.684156 | 7.4:+5817727 | MS.gene28818:CDS |
| ATCCTGAGAGTACAAGTTTG+GGG | 0.689240 | 7.4:+5816876 | MS.gene28818:CDS |
| GGACCAGCACACTTCTCGTG+AGG | 0.690652 | 7.4:-5819367 | None:intergenic |
| TAGCATTGGAGACTGCAAAG+AGG | 0.704536 | 7.4:-5819436 | None:intergenic |
| AAGATGGTTGAGTAACACAA+TGG | 0.709439 | 7.4:-5816712 | None:intergenic |
| GCTGCTGTCAAAGAAAACCG+AGG | 0.714689 | 7.4:+5818368 | MS.gene28818:CDS |
| ATGGTATCAGCAATGCTGTG+AGG | 0.773928 | 7.4:+5816501 | MS.gene28818:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATCATTTATGGTTATT+CGG | + | chr7.4:5817103-5817122 | MS.gene28818:intron | 15.0% |
| !! | TTATAAGTTAAAAAGGATAA+AGG | - | chr7.4:5817574-5817593 | None:intergenic | 15.0% |
| !!! | GTATTTAGATTTTACTTTTA+TGG | + | chr7.4:5817502-5817521 | MS.gene28818:intron | 15.0% |
| !! | AAATCTATGATAACTTATCA+AGG | - | chr7.4:5817194-5817213 | None:intergenic | 20.0% |
| !! | AATAATTGTTGTGAAAATCA+TGG | - | chr7.4:5819016-5819035 | None:intergenic | 20.0% |
| !! | TATCGCTTATATATCATTTA+TGG | + | chr7.4:5817095-5817114 | MS.gene28818:intron | 20.0% |
| !! | TTTCGCAAATAAAATAAGAA+GGG | + | chr7.4:5819132-5819151 | MS.gene28818:intron | 20.0% |
| !!! | ATGATTTTCACAACAATTAT+TGG | + | chr7.4:5819015-5819034 | MS.gene28818:intron | 20.0% |
| !!! | ATGGGTTTTATAAGTTAAAA+AGG | - | chr7.4:5817581-5817600 | None:intergenic | 20.0% |
| !!! | CTTTTATGGAAAAATATTTG+CGG | + | chr7.4:5817516-5817535 | MS.gene28818:intron | 20.0% |
| !!! | TGATTTTCACAACAATTATT+GGG | + | chr7.4:5819016-5819035 | MS.gene28818:intron | 20.0% |
| ! | AAAAATGCTGATATATTTGG+TGG | + | chr7.4:5816848-5816867 | MS.gene28818:CDS | 25.0% |
| ! | AATGATGGTTATGATAATAC+TGG | + | chr7.4:5816662-5816681 | MS.gene28818:CDS | 25.0% |
| ! | ATAAGAAAAAGAAAAAGCAG+AGG | + | chr7.4:5818099-5818118 | MS.gene28818:CDS | 25.0% |
| ! | CAAATAAAATAAGAAGGGAA+AGG | + | chr7.4:5819137-5819156 | MS.gene28818:intron | 25.0% |
| ! | GGAGTAGTTTAAATAATAGA+CGG | + | chr7.4:5816747-5816766 | MS.gene28818:CDS | 25.0% |
| ! | GTTTCGCAAATAAAATAAGA+AGG | + | chr7.4:5819131-5819150 | MS.gene28818:intron | 25.0% |
| ! | TCGAAAAATGCTGATATATT+TGG | + | chr7.4:5816845-5816864 | MS.gene28818:CDS | 25.0% |
| ! | TTTAGGTGAAAACACTTAAA+CGG | - | chr7.4:5817147-5817166 | None:intergenic | 25.0% |
| ! | TTTATAAAACTGTTCTTTGC+AGG | + | chr7.4:5818693-5818712 | MS.gene28818:intron | 25.0% |
| !! | GAGATTAAATTCTTTTCTCT+TGG | - | chr7.4:5816690-5816709 | None:intergenic | 25.0% |
| !! | TCCATTTAAATCCATTTTCT+AGG | + | chr7.4:5818517-5818536 | MS.gene28818:intron | 25.0% |
| !! | TTTTGTTCTCTCTAAATTAC+AGG | + | chr7.4:5818447-5818466 | MS.gene28818:intron | 25.0% |
| AAAATCCAACGAACATAATG+AGG | - | chr7.4:5818482-5818501 | None:intergenic | 30.0% | |
| AAATCCAACGAACATAATGA+GGG | - | chr7.4:5818481-5818500 | None:intergenic | 30.0% | |
| AAGAAGGTTAAACTTAAGGT+TGG | + | chr7.4:5816935-5816954 | MS.gene28818:CDS | 30.0% | |
| AATACCATCAGATATGTGAT+AGG | + | chr7.4:5818748-5818767 | MS.gene28818:CDS | 30.0% | |
| ACATACATAAACAAGTTACC+AGG | - | chr7.4:5818893-5818912 | None:intergenic | 30.0% | |
| ACATATCAAAAAGAATCCTC+AGG | - | chr7.4:5819113-5819132 | None:intergenic | 30.0% | |
| AGTACAATATACTCACTTCT+AGG | - | chr7.4:5818266-5818285 | None:intergenic | 30.0% | |
| ATGGAAACAACTAAAACCAA+AGG | - | chr7.4:5818997-5819016 | None:intergenic | 30.0% | |
| ATTTGATCAACACGATCAAA+TGG | - | chr7.4:5817600-5817619 | None:intergenic | 30.0% | |
| CACCTAAAAGTTTACACTTT+AGG | + | chr7.4:5817159-5817178 | MS.gene28818:intron | 30.0% | |
| GAAGCTATCAGAAAAATACT+TGG | + | chr7.4:5818542-5818561 | MS.gene28818:CDS | 30.0% | |
| GCAAACTTGGAGAAAAAAAA+TGG | + | chr7.4:5818915-5818934 | MS.gene28818:intron | 30.0% | |
| GGTTAAGAAGGTTAAACTTA+AGG | + | chr7.4:5816931-5816950 | MS.gene28818:CDS | 30.0% | |
| GTACAAATCCGTATAAATAC+CGG | + | chr7.4:5819395-5819414 | MS.gene28818:CDS | 30.0% | |
| TAAGCAACACTATATAGAGT+GGG | + | chr7.4:5817236-5817255 | MS.gene28818:intron | 30.0% | |
| TACAAATCCGTATAAATACC+GGG | + | chr7.4:5819396-5819415 | MS.gene28818:CDS | 30.0% | |
| TTATACGGATTTGTACATGA+TGG | - | chr7.4:5819391-5819410 | None:intergenic | 30.0% | |
| TTTATGTATGTTGGCAAACT+TGG | + | chr7.4:5818902-5818921 | MS.gene28818:intron | 30.0% | |
| TTTGAATCCCGGTATTTATA+CGG | - | chr7.4:5819406-5819425 | None:intergenic | 30.0% | |
| TTTGATCAACACGATCAAAT+GGG | - | chr7.4:5817599-5817618 | None:intergenic | 30.0% | |
| TTTGTTTCACGAGAATATTG+AGG | + | chr7.4:5817444-5817463 | MS.gene28818:intron | 30.0% | |
| ! | AGTTTACACTTTAGGAGATT+TGG | + | chr7.4:5817167-5817186 | MS.gene28818:intron | 30.0% |
| ! | CTCCTAAAGTGTAAACTTTT+AGG | - | chr7.4:5817164-5817183 | None:intergenic | 30.0% |
| ! | GCCTAGAAAATGGATTTAAA+TGG | - | chr7.4:5818521-5818540 | None:intergenic | 30.0% |
| !! | GGTAACTTGTTTATGTATGT+TGG | + | chr7.4:5818893-5818912 | MS.gene28818:intron | 30.0% |
| AAGATGGTTGAGTAACACAA+TGG | - | chr7.4:5816715-5816734 | None:intergenic | 35.0% | |
| AAGGTTAAACTTAAGGTTGG+TGG | + | chr7.4:5816938-5816957 | MS.gene28818:CDS | 35.0% | |
| AATATACTCACTTCTAGGTG+GGG | - | chr7.4:5818261-5818280 | None:intergenic | 35.0% | |
| AATCCAACGAACATAATGAG+GGG | - | chr7.4:5818480-5818499 | None:intergenic | 35.0% | |
| ACAATATACTCACTTCTAGG+TGG | - | chr7.4:5818263-5818282 | None:intergenic | 35.0% | |
| ACTGATATCATTAGCAGAGA+AGG | - | chr7.4:5819323-5819342 | None:intergenic | 35.0% | |
| AGTTTAATCGAGTTTCCCAA+TGG | + | chr7.4:5818224-5818243 | MS.gene28818:CDS | 35.0% | |
| CAAAAGTTATTTGGGCTTGA+AGG | - | chr7.4:5817280-5817299 | None:intergenic | 35.0% | |
| CAATATACTCACTTCTAGGT+GGG | - | chr7.4:5818262-5818281 | None:intergenic | 35.0% | |
| CCCTCATGCAAAAGTTATTT+GGG | - | chr7.4:5817288-5817307 | None:intergenic | 35.0% | |
| CGCATTGCTAATTTGATGTA+TGG | + | chr7.4:5819069-5819088 | MS.gene28818:intron | 35.0% | |
| CTTGCTAGATGTGTTCTTTA+TGG | - | chr7.4:5817760-5817779 | None:intergenic | 35.0% | |
| GAAAAAGAAAAAGCAGAGGA+AGG | + | chr7.4:5818103-5818122 | MS.gene28818:CDS | 35.0% | |
| GCTTGAAGATACAGATTATG+AGG | + | chr7.4:5818040-5818059 | MS.gene28818:CDS | 35.0% | |
| GGAATCTGTTGATGTATTGA+TGG | + | chr7.4:5818124-5818143 | MS.gene28818:CDS | 35.0% | |
| GTAAGCAACACTATATAGAG+TGG | + | chr7.4:5817235-5817254 | MS.gene28818:intron | 35.0% | |
| TAAACTTGCATTAGATGCAG+AGG | - | chr7.4:5818210-5818229 | None:intergenic | 35.0% | |
| TACAGATTATGAGGATGAAG+TGG | + | chr7.4:5818049-5818068 | MS.gene28818:CDS | 35.0% | |
| TACCAGGAAGATAGTTTAAC+AGG | - | chr7.4:5818877-5818896 | None:intergenic | 35.0% | |
| TCAAAACGCCAAATATCGTA+CGG | - | chr7.4:5817383-5817402 | None:intergenic | 35.0% | |
| TCATCTCAAAATCGAGGAAA+CGG | - | chr7.4:5819232-5819251 | None:intergenic | 35.0% | |
| TCGATGCATATTATGGACAT+TGG | + | chr7.4:5817357-5817376 | MS.gene28818:intron | 35.0% | |
| TTCGAAAAGCTCTCGTTTAT+CGG | + | chr7.4:5817021-5817040 | MS.gene28818:CDS | 35.0% | |
| ! | AAATAACTTTTGCATGAGGG+GGG | + | chr7.4:5817288-5817307 | MS.gene28818:intron | 35.0% |
| ! | AACTTGCATTTTACGCCTAA+TGG | - | chr7.4:5818397-5818416 | None:intergenic | 35.0% |
| ! | AATCCTGAGAGTACAAGTTT+GGG | + | chr7.4:5816875-5816894 | MS.gene28818:CDS | 35.0% |
| ! | ACTCATGTTGCAAGTTTGTT+TGG | + | chr7.4:5819278-5819297 | MS.gene28818:intron | 35.0% |
| ! | ATGATGCTGATGATGAGATT+CGG | + | chr7.4:5817856-5817875 | MS.gene28818:CDS | 35.0% |
| ! | ATGCTGATATATTTGGTGGA+AGG | + | chr7.4:5816852-5816871 | MS.gene28818:CDS | 35.0% |
| ! | ATGTATTGATGGACACTAAG+AGG | + | chr7.4:5818135-5818154 | MS.gene28818:CDS | 35.0% |
| ! | ATGTTCGTTGGATTTTACAC+TGG | + | chr7.4:5818486-5818505 | MS.gene28818:intron | 35.0% |
| ! | CAAATAACTTTTGCATGAGG+GGG | + | chr7.4:5817287-5817306 | MS.gene28818:intron | 35.0% |
| ! | CCAAATAACTTTTGCATGAG+GGG | + | chr7.4:5817286-5817305 | MS.gene28818:intron | 35.0% |
| ! | CCCAAATAACTTTTGCATGA+GGG | + | chr7.4:5817285-5817304 | MS.gene28818:intron | 35.0% |
| ! | TGTATTGATGGACACTAAGA+GGG | + | chr7.4:5818136-5818155 | MS.gene28818:CDS | 35.0% |
| ! | TTGTGTTACTCAACCATCTT+CGG | + | chr7.4:5816715-5816734 | MS.gene28818:CDS | 35.0% |
| !! | ACAGAATTACCAGTTGCTTT+TGG | - | chr7.4:5817063-5817082 | None:intergenic | 35.0% |
| !! | GTTTCTAGTGATGAGAATGA+TGG | + | chr7.4:5816647-5816666 | MS.gene28818:CDS | 35.0% |
| AAAAGAGAAGCCTACAGAAG+AGG | + | chr7.4:5818344-5818363 | MS.gene28818:CDS | 40.0% | |
| AAAAGCTCTCGTTTATCGGA+CGG | + | chr7.4:5817025-5817044 | MS.gene28818:CDS | 40.0% | |
| AAACTGTTCTTTGCAGGAGA+AGG | + | chr7.4:5818699-5818718 | MS.gene28818:intron | 40.0% | |
| AAGAACACATCTAGCAAGCA+AGG | + | chr7.4:5817762-5817781 | MS.gene28818:CDS | 40.0% | |
| AATAATAGACGGAGCAGTGA+AGG | + | chr7.4:5816758-5816777 | MS.gene28818:CDS | 40.0% | |
| ACTCTCTAGCGTCTCTAATA+TGG | + | chr7.4:5817956-5817975 | MS.gene28818:CDS | 40.0% | |
| AGATATGTGATAGGTCCTAC+TGG | + | chr7.4:5818757-5818776 | MS.gene28818:CDS | 40.0% | |
| AGGACCTATCACATATCTGA+TGG | - | chr7.4:5818755-5818774 | None:intergenic | 40.0% | |
| AGGATAGCTTGATACCTGAT+GGG | - | chr7.4:5818838-5818857 | None:intergenic | 40.0% | |
| ATACCGGGATTCAAAAACCA+AGG | + | chr7.4:5819411-5819430 | MS.gene28818:CDS | 40.0% | |
| ATCATCATCAACACCTCCTT+CGG | + | chr7.4:5816604-5816623 | MS.gene28818:CDS | 40.0% | |
| ATCCAACGAACATAATGAGG+GGG | - | chr7.4:5818479-5818498 | None:intergenic | 40.0% | |
| ATGAGGATGAAGTGGAATCA+GGG | + | chr7.4:5818057-5818076 | MS.gene28818:CDS | 40.0% | |
| ATGTGTCTGCAAGCATTCTA+GGG | + | chr7.4:5817480-5817499 | MS.gene28818:intron | 40.0% | |
| ATTGCTGATACCATCAAACC+GGG | - | chr7.4:5816495-5816514 | None:intergenic | 40.0% | |
| CAGGTCACATGCATCAAATT+AGG | - | chr7.4:5818858-5818877 | None:intergenic | 40.0% | |
| CAGTCTTCATCTCAAAATCG+AGG | - | chr7.4:5819238-5819257 | None:intergenic | 40.0% | |
| CATTGCTGATACCATCAAAC+CGG | - | chr7.4:5816496-5816515 | None:intergenic | 40.0% | |
| CCAACTGTCGATGCATATTA+TGG | + | chr7.4:5817350-5817369 | MS.gene28818:intron | 40.0% | |
| CCCCTCATGCAAAAGTTATT+TGG | - | chr7.4:5817289-5817308 | None:intergenic | 40.0% | |
| CTAGAACCTTTCCAATTAGC+AGG | - | chr7.4:5816794-5816813 | None:intergenic | 40.0% | |
| GAAGGATACGATCAATGTTC+AGG | - | chr7.4:5817262-5817281 | None:intergenic | 40.0% | |
| GACCTGTTAAACTATCTTCC+TGG | + | chr7.4:5818872-5818891 | MS.gene28818:intron | 40.0% | |
| GAGATGAAGAAGAATCAAGC+AGG | + | chr7.4:5817922-5817941 | MS.gene28818:CDS | 40.0% | |
| GATAGCTTCAGCCTAGAAAA+TGG | - | chr7.4:5818531-5818550 | None:intergenic | 40.0% | |
| GATATGTGATAGGTCCTACT+GGG | + | chr7.4:5818758-5818777 | MS.gene28818:CDS | 40.0% | |
| TACTTGGTCAAGATTCTAGC+AGG | + | chr7.4:5818558-5818577 | MS.gene28818:CDS | 40.0% | |
| TAGGATAGCTTGATACCTGA+TGG | - | chr7.4:5818839-5818858 | None:intergenic | 40.0% | |
| TATGAGGATGAAGTGGAATC+AGG | + | chr7.4:5818056-5818075 | MS.gene28818:CDS | 40.0% | |
| TCCGTGGAAGGATTTCAAAA+GGG | + | chr7.4:5817689-5817708 | MS.gene28818:CDS | 40.0% | |
| TGACTCTTACAACACGTCAA+CGG | + | chr7.4:5818162-5818181 | MS.gene28818:CDS | 40.0% | |
| TTATAAACACCAAGCCCATC+AGG | + | chr7.4:5818821-5818840 | MS.gene28818:CDS | 40.0% | |
| TTCCGTGGAAGGATTTCAAA+AGG | + | chr7.4:5817688-5817707 | MS.gene28818:CDS | 40.0% | |
| ! | ATCCTGAGAGTACAAGTTTG+GGG | + | chr7.4:5816876-5816895 | MS.gene28818:CDS | 40.0% |
| ! | CAGTTGGCTAAACTTTTAGG+CGG | - | chr7.4:5817337-5817356 | None:intergenic | 40.0% |
| ! | CCATAATATGCATCGACAGT+TGG | - | chr7.4:5817353-5817372 | None:intergenic | 40.0% |
| ! | CGACAGTTGGCTAAACTTTT+AGG | - | chr7.4:5817340-5817359 | None:intergenic | 40.0% |
| ! | GAATCCTGAGAGTACAAGTT+TGG | + | chr7.4:5816874-5816893 | MS.gene28818:CDS | 40.0% |
| ! | GCCCAAATAACTTTTGCATG+AGG | + | chr7.4:5817284-5817303 | MS.gene28818:intron | 40.0% |
| ! | GCGTAAAATGCAAGTTGAGA+AGG | + | chr7.4:5818401-5818420 | MS.gene28818:CDS | 40.0% |
| ! | TGATGCATGCTTTTCTGCTT+CGG | - | chr7.4:5818728-5818747 | None:intergenic | 40.0% |
| ! | TGGAAGATTTAGGATCTACC+CGG | + | chr7.4:5816474-5816493 | MS.gene28818:CDS | 40.0% |
| !! | GAACCTTGGTTTTTGAATCC+CGG | - | chr7.4:5819417-5819436 | None:intergenic | 40.0% |
| !! | GCTTGGTGTTTATAATCGCA+GGG | - | chr7.4:5818816-5818835 | None:intergenic | 40.0% |
| !! | TTAAAGCAAAGGCACTCACT+CGG | - | chr7.4:5819209-5819228 | None:intergenic | 40.0% |
| !!! | TTTTGAAATCCTTCCACGGA+AGG | - | chr7.4:5817689-5817708 | None:intergenic | 40.0% |
| AAACCTGTGCCAGATCTTCT+TGG | - | chr7.4:5818613-5818632 | None:intergenic | 45.0% | |
| AAATCACGACCTTCAGGATC+AGG | - | chr7.4:5816578-5816597 | None:intergenic | 45.0% | |
| AAGAAGATCTGGCACAGGTT+TGG | + | chr7.4:5818612-5818631 | MS.gene28818:intron | 45.0% | |
| ACTCTCTTGCTCTTACGAAC+AGG | - | chr7.4:5817801-5817820 | None:intergenic | 45.0% | |
| AGGCATCTTTGCCTGATTGA+AGG | - | chr7.4:5818190-5818209 | None:intergenic | 45.0% | |
| ATCTTTGCCTGACCTTGATG+AGG | - | chr7.4:5817991-5818010 | None:intergenic | 45.0% | |
| ATGGTATCAGCAATGCTGTG+AGG | + | chr7.4:5816501-5816520 | MS.gene28818:CDS | 45.0% | |
| CAAATCTCTGTGTTCGCCTT+TGG | + | chr7.4:5818978-5818997 | MS.gene28818:intron | 45.0% | |
| CCGTGGAAGGATTTCAAAAG+GGG | + | chr7.4:5817690-5817709 | MS.gene28818:CDS | 45.0% | |
| CCTCAGGAAGATAGACAAAC+AGG | - | chr7.4:5819097-5819116 | None:intergenic | 45.0% | |
| CCTGTTTGTCTATCTTCCTG+AGG | + | chr7.4:5819094-5819113 | MS.gene28818:intron | 45.0% | |
| CGAGGAAACGGTTAAAGCAA+AGG | - | chr7.4:5819220-5819239 | None:intergenic | 45.0% | |
| CTTGCTCCTGCTAATTGGAA+AGG | + | chr7.4:5816785-5816804 | MS.gene28818:CDS | 45.0% | |
| GACATTGGCCGTACGATATT+TGG | + | chr7.4:5817372-5817391 | MS.gene28818:intron | 45.0% | |
| GACTCTTACAACACGTCAAC+GGG | + | chr7.4:5818163-5818182 | MS.gene28818:CDS | 45.0% | |
| GAGTGAGAACAGGGTTAAGA+AGG | + | chr7.4:5816919-5816938 | MS.gene28818:CDS | 45.0% | |
| GATGTGTCTGCAAGCATTCT+AGG | + | chr7.4:5817479-5817498 | MS.gene28818:intron | 45.0% | |
| GGCATCTTTGCCTGATTGAA+GGG | - | chr7.4:5818189-5818208 | None:intergenic | 45.0% | |
| GTGTTCTTGCTCCTGCTAAT+TGG | + | chr7.4:5816780-5816799 | MS.gene28818:CDS | 45.0% | |
| TCAGGAATAGGCTGTGAATC+AGG | - | chr7.4:5816560-5816579 | None:intergenic | 45.0% | |
| TCATCAAGGTCAGGCAAAGA+TGG | + | chr7.4:5817990-5818009 | MS.gene28818:CDS | 45.0% | |
| TCTAACAGTGCTTCAGGAAG+CGG | + | chr7.4:5816992-5817011 | MS.gene28818:CDS | 45.0% | |
| TCTGCATCTAACAGTGCTTC+AGG | + | chr7.4:5816986-5817005 | MS.gene28818:CDS | 45.0% | |
| TGGAAGGATTTCAAAAGGGG+CGG | + | chr7.4:5817693-5817712 | MS.gene28818:CDS | 45.0% | |
| TTCCCCCTCATTATGTTCGT+TGG | + | chr7.4:5818474-5818493 | MS.gene28818:intron | 45.0% | |
| TTCTAGCAGGAAAAAGCGAG+AGG | + | chr7.4:5818571-5818590 | MS.gene28818:CDS | 45.0% | |
| TTGCAGTCTCCAATGCTACA+AGG | + | chr7.4:5819441-5819460 | MS.gene28818:CDS | 45.0% | |
| ! | GATTTCAAAAGGGGCGGATT+TGG | + | chr7.4:5817699-5817718 | MS.gene28818:CDS | 45.0% |
| ! | GTGACTTTTCCCGAGGAAAT+GGG | + | chr7.4:5818787-5818806 | MS.gene28818:CDS | 45.0% |
| ! | TAGCATTGGAGACTGCAAAG+AGG | - | chr7.4:5819439-5819458 | None:intergenic | 45.0% |
| ! | TGACTTTTCCCGAGGAAATG+GGG | + | chr7.4:5818788-5818807 | MS.gene28818:CDS | 45.0% |
| ! | TTAGGATCTACCCGGTTTGA+TGG | + | chr7.4:5816482-5816501 | MS.gene28818:CDS | 45.0% |
| ! | TTGGCTAAACTTTTAGGCGG+AGG | - | chr7.4:5817334-5817353 | None:intergenic | 45.0% |
| !! | AAAGAAGCGCCAAGAAGATC+TGG | + | chr7.4:5818601-5818620 | MS.gene28818:CDS | 45.0% |
| !! | GAAGGAGGTGTTGATGATGA+TGG | - | chr7.4:5816605-5816624 | None:intergenic | 45.0% |
| !! | GGCTTGGTGTTTATAATCGC+AGG | - | chr7.4:5818817-5818836 | None:intergenic | 45.0% |
| !!! | ATTACCAGTTGCTTTTGGCG+CGG | - | chr7.4:5817058-5817077 | None:intergenic | 45.0% |
| !!! | CCCCTTTTGAAATCCTTCCA+CGG | - | chr7.4:5817693-5817712 | None:intergenic | 45.0% |
| AAAGTCACCACTGTCCCAGT+AGG | - | chr7.4:5818775-5818794 | None:intergenic | 50.0% | |
| AACCATCTTCGGCTAGTGGA+CGG | + | chr7.4:5816726-5816745 | MS.gene28818:CDS | 50.0% | |
| AATGCTGCCTCATCAAGGTC+AGG | + | chr7.4:5817981-5818000 | MS.gene28818:CDS | 50.0% | |
| ACTCAACCATCTTCGGCTAG+TGG | + | chr7.4:5816722-5816741 | MS.gene28818:CDS | 50.0% | |
| AGAAAACCGAGGCTGCCATT+AGG | + | chr7.4:5818379-5818398 | MS.gene28818:CDS | 50.0% | |
| ATCATCAACACCTCCTTCGG+AGG | + | chr7.4:5816607-5816626 | MS.gene28818:CDS | 50.0% | |
| CAGCCTATTCCTGATCCTGA+AGG | + | chr7.4:5816566-5816585 | MS.gene28818:CDS | 50.0% | |
| CGACCTTCAGGATCAGGAAT+AGG | - | chr7.4:5816572-5816591 | None:intergenic | 50.0% | |
| GAGACTGCAAAGAGGAACCT+TGG | - | chr7.4:5819431-5819450 | None:intergenic | 50.0% | |
| GCTGCTGTCAAAGAAAACCG+AGG | + | chr7.4:5818368-5818387 | MS.gene28818:CDS | 50.0% | |
| GGCGAAAAATCACGACCTTC+AGG | - | chr7.4:5816584-5816603 | None:intergenic | 50.0% | |
| GTATCAGCAATGCTGTGAGG+AGG | + | chr7.4:5816504-5816523 | MS.gene28818:CDS | 50.0% | |
| TGCCCCAAACTTGTACTCTC+AGG | - | chr7.4:5816881-5816900 | None:intergenic | 50.0% | |
| TGGACAATGCTGCCTCATCA+AGG | + | chr7.4:5817976-5817995 | MS.gene28818:CDS | 50.0% | |
| TTATCAGCAGCTTCCTCCGA+AGG | - | chr7.4:5816623-5816642 | None:intergenic | 50.0% | |
| TTTACGCCTAATGGCAGCCT+CGG | - | chr7.4:5818388-5818407 | None:intergenic | 50.0% | |
| TTTCACCAGTAGTCTTCGCC+TGG | - | chr7.4:5819471-5819490 | None:intergenic | 50.0% | |
| ! | AGTTTGGGGCAGCTTCAAGA+TGG | + | chr7.4:5816890-5816909 | MS.gene28818:CDS | 50.0% |
| ! | GCAAGTTGAGAAGGCTGCTA+GGG | + | chr7.4:5818410-5818429 | MS.gene28818:CDS | 50.0% |
| ! | GGGCAGCTTCAAGATGGATT+GGG | + | chr7.4:5816896-5816915 | MS.gene28818:CDS | 50.0% |
| ! | GGTGACTTTTCCCGAGGAAA+TGG | + | chr7.4:5818786-5818805 | MS.gene28818:CDS | 50.0% |
| ! | TGCAAGTTGAGAAGGCTGCT+AGG | + | chr7.4:5818409-5818428 | MS.gene28818:CDS | 50.0% |
| ! | TGGATTGGGGAGTGAGAACA+GGG | + | chr7.4:5816910-5816929 | MS.gene28818:CDS | 50.0% |
| !! | AAAAGGGGCGGATTTGGTGT+CGG | + | chr7.4:5817705-5817724 | MS.gene28818:CDS | 50.0% |
| !! | AGCTTGATACCTGATGGGCT+TGG | - | chr7.4:5818833-5818852 | None:intergenic | 50.0% |
| !! | ATGGATTGGGGAGTGAGAAC+AGG | + | chr7.4:5816909-5816928 | MS.gene28818:CDS | 50.0% |
| !! | GGCAGCTTCAAGATGGATTG+GGG | + | chr7.4:5816897-5816916 | MS.gene28818:CDS | 50.0% |
| AGATCTGGCACAGGTTTGGC+TGG | + | chr7.4:5818616-5818635 | MS.gene28818:intron | 55.0% | |
| AGGCCTCGCTTCTTAGCAGA+CGG | - | chr7.4:5817660-5817679 | None:intergenic | 55.0% | |
| AGTACCCAAGCGACGTGTAC+TGG | + | chr7.4:5817818-5817837 | MS.gene28818:CDS | 55.0% | |
| ATAGGCTGTGAATCAGGCCG+TGG | - | chr7.4:5816554-5816573 | None:intergenic | 55.0% | |
| CCAATGCTACAAGGCTGTCC+AGG | + | chr7.4:5819450-5819469 | MS.gene28818:CDS | 55.0% | |
| CCATCCAGTACACGTCGCTT+GGG | - | chr7.4:5817825-5817844 | None:intergenic | 55.0% | |
| GAAGGCTGCTAGGGAATCTG+AGG | + | chr7.4:5818419-5818438 | MS.gene28818:CDS | 55.0% | |
| GAAGTGGAATCAGGGTCTGC+TGG | + | chr7.4:5818065-5818084 | MS.gene28818:CDS | 55.0% | |
| GACAGCAGCTCCTCTTCTGT+AGG | - | chr7.4:5818357-5818376 | None:intergenic | 55.0% | |
| GATAGGTCCTACTGGGACAG+TGG | + | chr7.4:5818765-5818784 | MS.gene28818:CDS | 55.0% | |
| GATCTGGCACAGGTTTGGCT+GGG | + | chr7.4:5818617-5818636 | MS.gene28818:intron | 55.0% | |
| GCAATGCTGTGAGGAGGAAG+AGG | + | chr7.4:5816510-5816529 | MS.gene28818:CDS | 55.0% | |
| GCTAAGAAGCGAGGCCTCAA+AGG | + | chr7.4:5817663-5817682 | MS.gene28818:CDS | 55.0% | |
| GGAAGGAAGAGACGTCGATG+GGG | + | chr7.4:5817727-5817746 | MS.gene28818:CDS | 55.0% | |
| GGGAAGGAAGAGACGTCGAT+GGG | + | chr7.4:5817726-5817745 | MS.gene28818:CDS | 55.0% | |
| GGGGCAGCTTCAAGATGGAT+TGG | + | chr7.4:5816895-5816914 | MS.gene28818:CDS | 55.0% | |
| GGGGCAGGAGGTAATCCATT+GGG | - | chr7.4:5818242-5818261 | None:intergenic | 55.0% | |
| TACTCACTTCTAGGTGGGGC+AGG | - | chr7.4:5818257-5818276 | None:intergenic | 55.0% | |
| TCCATCCAGTACACGTCGCT+TGG | - | chr7.4:5817826-5817845 | None:intergenic | 55.0% | |
| TCTCCGTCTGCTAAGAAGCG+AGG | + | chr7.4:5817654-5817673 | MS.gene28818:CDS | 55.0% | |
| TGGGGCAGGAGGTAATCCAT+TGG | - | chr7.4:5818243-5818262 | None:intergenic | 55.0% | |
| ! | CCTGGACAGCCTTGTAGCAT+TGG | - | chr7.4:5819453-5819472 | None:intergenic | 55.0% |
| ! | GACAGTGGTGACTTTTCCCG+AGG | + | chr7.4:5818780-5818799 | MS.gene28818:CDS | 55.0% |
| !! | AAAGGGGCGGATTTGGTGTC+GGG | + | chr7.4:5817706-5817725 | MS.gene28818:CDS | 55.0% |
| AGGGTCTGCTGGAGAGCAAG+AGG | + | chr7.4:5818076-5818095 | MS.gene28818:CDS | 60.0% | |
| CAGACCGCGCCAAAAGCAAC+TGG | + | chr7.4:5817051-5817070 | MS.gene28818:CDS | 60.0% | |
| CCAGCACACTTCTCGTGAGG+TGG | - | chr7.4:5819367-5819386 | None:intergenic | 60.0% | |
| CCCAAGCGACGTGTACTGGA+TGG | + | chr7.4:5817822-5817841 | MS.gene28818:CDS | 60.0% | |
| CCTCAAAGGCCTTCCGTGGA+AGG | + | chr7.4:5817677-5817696 | MS.gene28818:CDS | 60.0% | |
| CCTTCCACGGAAGGCCTTTG+AGG | - | chr7.4:5817680-5817699 | None:intergenic | 60.0% | |
| CGCAGGGATCCCCATTTCCT+CGG | - | chr7.4:5818800-5818819 | None:intergenic | 60.0% | |
| CGGGAAGGAAGAGACGTCGA+TGG | + | chr7.4:5817725-5817744 | MS.gene28818:CDS | 60.0% | |
| CGTCAACGGGCCCTTCAATC+AGG | + | chr7.4:5818176-5818195 | MS.gene28818:CDS | 60.0% | |
| CTCCGTCCACTAGCCGAAGA+TGG | - | chr7.4:5816731-5816750 | None:intergenic | 60.0% | |
| GCACACTTCTCGTGAGGTGG+AGG | - | chr7.4:5819364-5819383 | None:intergenic | 60.0% | |
| GCAGGGATCCCCATTTCCTC+GGG | - | chr7.4:5818799-5818818 | None:intergenic | 60.0% | |
| GCGCCAAGAAGATCTGGCAC+AGG | + | chr7.4:5818607-5818626 | MS.gene28818:CDS | 60.0% | |
| GCTGTCCAGGCGAAGACTAC+TGG | + | chr7.4:5819463-5819482 | MS.gene28818:CDS | 60.0% | |
| GGACCAGCACACTTCTCGTG+AGG | - | chr7.4:5819370-5819389 | None:intergenic | 60.0% | |
| TCACTTCTAGGTGGGGCAGG+AGG | - | chr7.4:5818254-5818273 | None:intergenic | 60.0% | |
| TCAGCAGCTTCCTCCGAAGG+AGG | - | chr7.4:5816620-5816639 | None:intergenic | 60.0% | |
| ! | CCACCTCACGAGAAGTGTGC+TGG | + | chr7.4:5819364-5819383 | MS.gene28818:CDS | 60.0% |
| !!! | CAGTTGCTTTTGGCGCGGTC+TGG | - | chr7.4:5817053-5817072 | None:intergenic | 60.0% |
| AGAGGAGCCAACCATCGCGC+AGG | + | chr7.4:5816528-5816547 | MS.gene28818:CDS | 65.0% | |
| GAGGCCTCAAAGGCCTTCCG+TGG | + | chr7.4:5817673-5817692 | MS.gene28818:CDS | 65.0% | |
| !! | GGGCGGATTTGGTGTCGGGA+AGG | + | chr7.4:5817710-5817729 | MS.gene28818:CDS | 65.0% |
| GCCAACCATCGCGCAGGCCA+CGG | + | chr7.4:5816534-5816553 | MS.gene28818:CDS | 70.0% | |
| GCCGTGGCCTGCGCGATGGT+TGG | - | chr7.4:5816538-5816557 | None:intergenic | 75.0% | |
| TCAGGCCGTGGCCTGCGCGA+TGG | - | chr7.4:5816542-5816561 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5816473 | 5819501 | 5816473 | ID=MS.gene28818 |
| chr7.4 | mRNA | 5816473 | 5819501 | 5816473 | ID=MS.gene28818.t1;Parent=MS.gene28818 |
| chr7.4 | exon | 5816473 | 5817072 | 5816473 | ID=MS.gene28818.t1.exon1;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5816473 | 5817072 | 5816473 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| chr7.4 | exon | 5817633 | 5818269 | 5817633 | ID=MS.gene28818.t1.exon2;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5817633 | 5818269 | 5817633 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| chr7.4 | exon | 5818340 | 5818440 | 5818340 | ID=MS.gene28818.t1.exon3;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5818340 | 5818440 | 5818340 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| chr7.4 | exon | 5818539 | 5818628 | 5818539 | ID=MS.gene28818.t1.exon4;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5818539 | 5818628 | 5818539 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| chr7.4 | exon | 5818715 | 5818842 | 5818715 | ID=MS.gene28818.t1.exon5;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5818715 | 5818842 | 5818715 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| chr7.4 | exon | 5819357 | 5819501 | 5819357 | ID=MS.gene28818.t1.exon6;Parent=MS.gene28818.t1 |
| chr7.4 | CDS | 5819357 | 5819501 | 5819357 | ID=cds.MS.gene28818.t1;Parent=MS.gene28818.t1 |
| Gene Sequence |
| Protein sequence |
