AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004225

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004225.t1 MTR_2g015550 98.687 533 7 0 1 533 1 533 0.0 1109
MS.gene004225.t1 MTR_2g006790 82.584 534 67 3 1 533 1 509 0.0 904
MS.gene004225.t1 MTR_4g109890 56.343 536 224 6 1 530 1 532 0.0 628
MS.gene004225.t1 MTR_2g461670 49.576 589 236 7 1 530 1 587 0.0 597
MS.gene004225.t1 MTR_2g027740 47.094 499 256 5 36 533 175 666 3.32e-166 487
MS.gene004225.t1 MTR_3g107930 49.789 474 221 6 67 532 122 586 7.38e-161 470
MS.gene004225.t1 MTR_3g107930 49.789 474 221 6 67 532 199 663 5.24e-160 471
MS.gene004225.t1 MTR_8g092000 48.172 465 231 4 70 533 124 579 1.09e-157 462
MS.gene004225.t1 MTR_7g075840 48.498 466 231 5 70 532 203 662 3.02e-155 459
MS.gene004225.t1 MTR_8g033360 48.966 435 209 5 70 498 170 597 5.73e-149 444
MS.gene004225.t1 MTR_7g055600 48.900 409 202 4 128 532 27 432 1.70e-139 410
MS.gene004225.t1 MTR_7g057530 48.900 409 202 4 128 532 27 432 1.70e-139 410
MS.gene004225.t1 MTR_6g016380 42.975 484 245 10 72 532 78 553 9.63e-130 389
MS.gene004225.t1 MTR_7g012370 40.411 438 227 9 108 521 97 524 1.06e-112 346
MS.gene004225.t1 MTR_2g082650 39.753 405 220 8 149 532 9 410 1.71e-110 335
MS.gene004225.t1 MTR_2g082650 39.753 405 220 8 149 532 138 539 1.25e-108 335
MS.gene004225.t1 MTR_6g013840 41.463 451 224 10 108 531 92 529 1.29e-106 329
MS.gene004225.t1 MTR_7g096160 38.178 461 252 8 77 533 222 653 1.62e-104 327
MS.gene004225.t1 MTR_4g133570 40.204 393 215 7 158 531 70 461 3.68e-102 315
MS.gene004225.t1 MTR_3g452360 37.717 403 236 6 141 530 126 526 1.19e-94 298
MS.gene004225.t1 MTR_3g452360 38.786 379 217 6 165 530 1 377 7.31e-94 291
MS.gene004225.t1 MTR_1g070490 37.365 463 253 10 76 532 166 597 1.83e-87 282
MS.gene004225.t1 MTR_7g012370 38.310 355 188 7 108 441 97 441 1.23e-78 254
MS.gene004225.t1 MTR_7g074680 30.556 468 294 10 72 531 118 562 5.48e-58 202
MS.gene004225.t1 MTR_7g074680 30.556 468 294 10 72 531 158 602 1.06e-57 202
MS.gene004225.t1 MTR_7g074680 30.556 468 294 10 72 531 178 622 1.50e-57 202
MS.gene004225.t1 MTR_7g074680 30.556 468 294 10 72 531 178 622 1.73e-57 202
MS.gene004225.t1 MTR_7g074680 30.556 468 294 10 72 531 198 642 2.57e-57 202
MS.gene004225.t1 MTR_7g074680 29.607 483 296 11 72 531 198 659 7.07e-56 199
MS.gene004225.t1 MTR_4g133942 50.746 201 68 4 337 533 160 333 5.29e-54 186
MS.gene004225.t1 MTR_3g092310 33.182 220 137 6 315 525 117 335 5.22e-25 106
MS.gene004225.t1 MTR_7g109210 33.846 195 120 5 339 524 159 353 2.67e-24 104
MS.gene004225.t1 MTR_7g094230 33.143 175 111 4 339 507 151 325 1.70e-22 99.4
MS.gene004225.t1 MTR_5g036580 26.452 310 186 11 224 519 75 356 2.36e-22 99.8
MS.gene004225.t1 MTR_6g008900 31.401 207 124 7 339 527 165 371 1.44e-21 97.1
MS.gene004225.t1 MTR_4g071620 31.401 207 124 7 339 527 165 371 1.44e-21 97.1
MS.gene004225.t1 MTR_4g118030 29.907 214 138 8 315 520 122 331 9.51e-21 94.0
MS.gene004225.t1 MTR_8g078240 32.796 186 116 5 339 515 142 327 2.67e-20 92.8
MS.gene004225.t1 MTR_3g111600 31.522 184 119 5 339 515 80 263 3.91e-19 88.2
MS.gene004225.t1 MTR_5g019220 30.660 212 139 6 311 515 139 349 3.14e-18 87.0
MS.gene004225.t1 MTR_1g021855 31.892 185 118 5 339 515 165 349 4.54e-18 86.3
MS.gene004225.t1 MTR_1g089820 30.151 199 132 5 315 507 131 328 1.20e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004225.t1 AT2G20810 79.851 536 105 2 1 533 1 536 0.0 878
MS.gene004225.t1 AT1G18580 55.224 536 232 5 1 530 1 534 0.0 603
MS.gene004225.t1 AT5G47780 48.511 470 233 4 65 532 152 614 3.26e-166 485
MS.gene004225.t1 AT3G61130 47.854 466 235 4 70 533 213 672 5.29e-165 484
MS.gene004225.t1 AT4G38270 47.899 476 233 7 67 533 210 679 4.87e-158 466
MS.gene004225.t1 AT4G38270 47.899 476 233 7 67 533 206 675 7.99e-158 466
MS.gene004225.t1 AT3G25140 51.289 388 183 3 149 532 172 557 1.28e-147 435
MS.gene004225.t1 AT2G46480 45.085 468 240 6 70 530 79 536 6.58e-141 417
MS.gene004225.t1 AT2G46480 45.085 468 240 6 70 530 92 549 1.94e-140 417
MS.gene004225.t1 AT3G02350 45.000 480 241 8 72 532 84 559 1.01e-130 392
MS.gene004225.t1 AT2G46480 41.880 468 230 7 70 530 79 511 6.09e-125 376
MS.gene004225.t1 AT2G46480 41.880 468 230 7 70 530 92 524 1.37e-124 375
MS.gene004225.t1 AT3G01040 40.625 448 232 9 108 531 92 529 6.84e-114 348
MS.gene004225.t1 AT3G01040 40.625 448 232 9 108 531 92 529 6.84e-114 348
MS.gene004225.t1 AT2G30575 36.419 497 276 8 41 533 149 609 2.19e-109 339
MS.gene004225.t1 AT5G15470 40.271 442 230 9 114 531 98 529 2.56e-109 336
MS.gene004225.t1 AT5G54690 38.806 402 226 8 150 532 132 532 2.47e-106 328
MS.gene004225.t1 AT1G06780 37.525 493 269 9 45 533 131 588 6.96e-106 329
MS.gene004225.t1 AT1G06780 37.525 493 269 9 45 533 144 601 1.51e-105 328
MS.gene004225.t1 AT3G01040 37.946 448 211 10 108 531 92 496 1.97e-98 307
MS.gene004225.t1 AT3G58790 38.875 391 218 8 159 530 16 404 7.15e-89 279
MS.gene004225.t1 AT3G58790 37.232 419 235 9 131 530 127 536 1.26e-87 280
MS.gene004225.t1 AT2G38650 32.623 469 282 9 72 533 177 618 1.32e-65 224
MS.gene004225.t1 AT2G38650 32.623 469 282 9 72 533 177 618 1.32e-65 224
MS.gene004225.t1 AT2G38650 31.830 377 226 8 72 443 177 527 1.12e-44 166
MS.gene004225.t1 AT1G70090 26.498 317 191 11 224 526 78 366 1.70e-24 105
MS.gene004225.t1 AT1G70090 26.498 317 191 11 224 526 78 366 1.70e-24 105
MS.gene004225.t1 AT1G24170 25.552 317 194 11 224 526 81 369 5.37e-21 95.5
MS.gene004225.t1 AT4G02130 30.102 196 128 5 339 525 150 345 1.15e-20 94.0
MS.gene004225.t1 AT4G02130 30.102 196 128 5 339 525 150 345 1.15e-20 94.0
MS.gene004225.t1 AT4G02130 30.102 196 128 5 339 525 150 345 1.15e-20 94.0
MS.gene004225.t1 AT3G62660 26.962 293 171 9 242 524 99 358 1.62e-20 93.6
MS.gene004225.t1 AT1G02720 27.302 315 189 10 222 525 75 360 3.12e-20 92.8
MS.gene004225.t1 AT1G02720 27.302 315 189 10 222 525 75 360 3.12e-20 92.8
MS.gene004225.t1 AT3G28340 25.965 285 174 10 239 515 84 339 4.39e-20 92.4
MS.gene004225.t1 AT1G19300 31.522 184 119 5 339 515 150 333 6.89e-20 91.7
MS.gene004225.t1 AT3G06260 29.787 188 124 5 339 520 150 335 1.59e-19 90.5
MS.gene004225.t1 AT1G13250 32.787 183 117 4 339 515 144 326 4.11e-18 86.3
MS.gene004225.t1 AT3G50760 30.688 189 121 5 337 515 134 322 6.00e-17 82.8

Find 108 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGCATGGACAGATATTT+AGG 0.176518 2.4:+69295464 None:intergenic
CTTTCCACCATCACTGTTTC+CGG 0.176992 2.4:+69295508 None:intergenic
TTCTTCAAGAGCTTGGATTT+TGG 0.197626 2.4:+69295982 None:intergenic
TCTGATTCTCTGGTTGTTAA+AGG 0.216283 2.4:+69296091 None:intergenic
GATTTGAATGGGAATGTTAA+TGG 0.254551 2.4:-69295335 MS.gene004225:CDS
ACATCTCTTCGGTAATATTA+AGG 0.257268 2.4:+69296278 None:intergenic
CACTTAGTTCCCAAGCAAAT+TGG 0.261830 2.4:+69296167 None:intergenic
GATGCATGCGGATGGGCATT+TGG 0.261833 2.4:-69295224 MS.gene004225:CDS
GAGAATAGTTCAAGTATTTA+TGG 0.277457 2.4:+69295276 None:intergenic
GCAAGTGGAGATGAAGATTA+AGG 0.295253 2.4:-69295813 MS.gene004225:CDS
GGATCCATCGTGGCATGTAC+TGG 0.298222 2.4:-69295051 MS.gene004225:CDS
CCTGAAGAAGATCGTGTTCC+TGG 0.305211 2.4:-69295405 MS.gene004225:CDS
CCAAACCTTGGTTGAAGATT+GGG 0.323300 2.4:-69294959 MS.gene004225:CDS
TCGTGGCATGTACTGGGTTT+TGG 0.330769 2.4:-69295044 MS.gene004225:CDS
CCAGGAACACGATCTTCTTC+AGG 0.343617 2.4:+69295405 None:intergenic
AGTGAAAAGAGTTCAAAATA+TGG 0.351614 2.4:-69295944 MS.gene004225:CDS
CCCAATCTTCAACCAAGGTT+TGG 0.377804 2.4:+69294959 None:intergenic
TCCAAACCTTGGTTGAAGAT+TGG 0.380861 2.4:-69294960 MS.gene004225:CDS
TAAGCATGGACAGATATTTA+GGG 0.391103 2.4:+69295465 None:intergenic
TCATCTGTTCTTCAAGAGCT+TGG 0.400022 2.4:+69295975 None:intergenic
ATGCATGCGGATGGGCATTT+GGG 0.402621 2.4:-69295223 MS.gene004225:CDS
GATAGCACTGTCTGATTCTC+TGG 0.402777 2.4:+69296081 None:intergenic
AAAGTTGCATTGCTGCAATA+AGG 0.409846 2.4:+69294887 None:intergenic
TCATAGTTGCACTGTCATAA+TGG 0.413392 2.4:+69296020 None:intergenic
TTAGGGTTACGAAACTTGAT+AGG 0.418201 2.4:+69295482 None:intergenic
GCTTATACTGTCTGGGTGTC+CGG 0.419318 2.4:-69295892 MS.gene004225:CDS
TATCTGATCATTAAGTTGTC+TGG 0.431525 2.4:+69296237 None:intergenic
TAACTGGCATCTACCACTAT+TGG 0.432849 2.4:-69295160 MS.gene004225:CDS
CACCCCACGAAAGTCATTCA+TGG 0.437582 2.4:+69295634 None:intergenic
TTACAACAAAAGCTTTAGCT+AGG 0.438992 2.4:+69296212 None:intergenic
GTAACAATCTCCAATTTGCT+TGG 0.440025 2.4:-69296177 MS.gene004225:CDS
AGACAGTGCTATCCGAGATA+TGG 0.444268 2.4:-69296071 MS.gene004225:CDS
TGAACCATTCAGTTGTCAAC+CGG 0.445715 2.4:+69295873 None:intergenic
GGGGCTGTACTGCACTTCAA+TGG 0.449476 2.4:-69294987 MS.gene004225:CDS
AATGCCCATCCGCATGCATC+GGG 0.461211 2.4:+69295227 None:intergenic
TAACAATCTCCAATTTGCTT+GGG 0.461680 2.4:-69296176 MS.gene004225:CDS
CCATAAAATGTTAATAATCC+AGG 0.463302 2.4:+69295089 None:intergenic
TTATGGACTAACAGAACCCT+TGG 0.463314 2.4:-69295072 MS.gene004225:CDS
AAACTCGGCACTTTGCCACC+TGG 0.467528 2.4:-69295107 MS.gene004225:CDS
TCAAAATGAGCTCTTATAAG+AGG 0.468247 2.4:+69295251 None:intergenic
GGGCTGTACTGCACTTCAAT+GGG 0.475347 2.4:-69294986 MS.gene004225:CDS
AACACGATCTTCTTCAGGGC+AGG 0.482498 2.4:+69295410 None:intergenic
AATGCCCACCACAATGCATC+AGG 0.482629 2.4:+69297571 None:intergenic
TCAGGAACCCTTCTCCGTAC+TGG 0.487778 2.4:+69297589 None:intergenic
CATAATGGAGCTGCTGAGCC+TGG 0.490002 2.4:+69296035 None:intergenic
GATCCATCGTGGCATGTACT+GGG 0.492139 2.4:-69295050 MS.gene004225:CDS
TTCGAAGGCCAGTACGGAGA+AGG 0.494054 2.4:-69297597 MS.gene004225:CDS
AGACTCAATTTGAGTCCCTC+TGG 0.504318 2.4:+69297510 None:intergenic
AAATGCCCATCCGCATGCAT+CGG 0.506827 2.4:+69295226 None:intergenic
AGAGATGTTAAGTTCCGATT+CGG 0.509386 2.4:-69296263 MS.gene004225:CDS
GAACCACGACGTCATCGTCC+AGG 0.514466 2.4:+69295387 None:intergenic
CGATGACGTCGTGGTTCAGA+AGG 0.515338 2.4:-69295381 MS.gene004225:CDS
ATCGGAACTTAACATCTCTT+CGG 0.516441 2.4:+69296267 None:intergenic
AAGTTGTCTGGTCACCGAAT+CGG 0.521297 2.4:+69296249 None:intergenic
CAATTTGCAAAAGAAATTGA+AGG 0.524075 2.4:-69295843 MS.gene004225:CDS
TTGCCATGAATGACTTTCGT+GGG 0.524242 2.4:-69295637 MS.gene004225:CDS
TTGATCCCGATGCATGCGGA+TGG 0.524271 2.4:-69295232 MS.gene004225:CDS
CAGGAACACGATCTTCTTCA+GGG 0.526754 2.4:+69295406 None:intergenic
TCAATCCCAATCTTCAACCA+AGG 0.528594 2.4:+69294954 None:intergenic
AATAAATTATGCTTCGATGA+AGG 0.529408 2.4:-69295666 MS.gene004225:CDS
GATCCTCAGTTGATAGAAAG+AGG 0.537753 2.4:-69295008 MS.gene004225:CDS
TGTCCATGCTTAACCACTTG+AGG 0.537760 2.4:-69295454 MS.gene004225:CDS
TATGGCTTTATTGTTATACC+AGG 0.538758 2.4:-69296053 MS.gene004225:CDS
TACATGCCACGATGGATCCA+AGG 0.541821 2.4:+69295055 None:intergenic
TACAACAAAAGCTTTAGCTA+GGG 0.546643 2.4:+69296213 None:intergenic
GTCTAGACCGCCTTTGTCCA+AGG 0.549937 2.4:-69297491 MS.gene004225:intron
TCTTGAAGTTGCTTAAGCAC+AGG 0.555450 2.4:+69295557 None:intergenic
TCGAAGGCCAGTACGGAGAA+GGG 0.558622 2.4:-69297596 MS.gene004225:CDS
AGAAGTATGAAGACTTCTCA+TGG 0.559312 2.4:-69295598 MS.gene004225:CDS
AGAGAATAATCTGCGAATTG+CGG 0.561776 2.4:+69296137 None:intergenic
GCAATAAATACCTTGGACAA+AGG 0.564738 2.4:+69297481 None:intergenic
TGGCATCTACCACTATTGGC+AGG 0.567517 2.4:-69295156 MS.gene004225:CDS
ATAACAATAAAGCCATATCT+CGG 0.568216 2.4:+69296059 None:intergenic
TGATCCCGATGCATGCGGAT+GGG 0.570203 2.4:-69295231 MS.gene004225:CDS
TATCAGAGAACACACAAAAG+TGG 0.570397 2.4:+69295777 None:intergenic
TCAATGGGAACTCCAAACCT+TGG 0.574241 2.4:-69294971 MS.gene004225:CDS
AAAAGAAATTGAAGGACAAG+AGG 0.585551 2.4:-69295835 MS.gene004225:CDS
ATCCTCAGTTGATAGAAAGA+GGG 0.587849 2.4:-69295007 MS.gene004225:CDS
GAACCTCAAGTGGTTAAGCA+TGG 0.593568 2.4:+69295451 None:intergenic
GGCAGGAAAAGAATGTAGAT+CGG 0.596579 2.4:-69295139 MS.gene004225:CDS
TTCAAAATATGGACAAATAG+CGG 0.597495 2.4:-69295933 MS.gene004225:CDS
AGAATGTAGATCGGACATTG+TGG 0.600112 2.4:-69295130 MS.gene004225:CDS
TTCTCTCAAATGCTGCCACT+AGG 0.600248 2.4:-69296120 MS.gene004225:CDS
GGTTCCTGATGCATTGTGGT+GGG 0.606322 2.4:-69297575 MS.gene004225:CDS
TTATCTATATTCTCACCAGA+GGG 0.611948 2.4:-69297525 MS.gene004225:CDS
AATTTATTTCATCAGTGACA+AGG 0.620020 2.4:+69295681 None:intergenic
TGACTTTCGTGGGGTGACTG+TGG 0.624497 2.4:-69295627 MS.gene004225:CDS
ATTGAAGGACAAGAGGCAAG+TGG 0.625069 2.4:-69295828 MS.gene004225:CDS
GATCGGACATTGTGGAAACT+CGG 0.627650 2.4:-69295122 MS.gene004225:CDS
CAGGGATATAGAACCTCAAG+TGG 0.628089 2.4:+69295441 None:intergenic
ACATGCCACGATGGATCCAA+GGG 0.630341 2.4:+69295056 None:intergenic
TTTGCCATGAATGACTTTCG+TGG 0.634111 2.4:-69295638 MS.gene004225:CDS
TTTATCTATATTCTCACCAG+AGG 0.634229 2.4:-69297526 MS.gene004225:CDS
GGGTTCCTGATGCATTGTGG+TGG 0.643605 2.4:-69297576 MS.gene004225:CDS
TCCTCAGTTGATAGAAAGAG+GGG 0.645815 2.4:-69295006 MS.gene004225:CDS
CATCATTGCAACTTCAGTCG+TGG 0.652388 2.4:-69295753 MS.gene004225:CDS
ATAAATACCTTGGACAAAGG+CGG 0.654401 2.4:+69297484 None:intergenic
ATTATGCTTCGATGAAGGCG+TGG 0.658411 2.4:-69295661 MS.gene004225:CDS
TGCCATGAATGACTTTCGTG+GGG 0.659273 2.4:-69295636 MS.gene004225:CDS
TGGAGCTGTTGAGACATGCA+TGG 0.666652 2.4:-69295315 MS.gene004225:CDS
TAAAATGTTAATAATCCAGG+TGG 0.669793 2.4:+69295092 None:intergenic
GTGTCCGGTTGACAACTGAA+TGG 0.675940 2.4:-69295877 MS.gene004225:CDS
GAAGGGTTCCTGATGCATTG+TGG 0.677895 2.4:-69297579 MS.gene004225:CDS
GCCCCTCTTTCTATCAACTG+AGG 0.679282 2.4:+69295005 None:intergenic
GTTCCTGGACGATGACGTCG+TGG 0.688675 2.4:-69295390 MS.gene004225:CDS
AAACCCAGTACATGCCACGA+TGG 0.692978 2.4:+69295047 None:intergenic
TGTTAAAGGAGAACGCCTAG+TGG 0.701069 2.4:+69296105 None:intergenic
CAGAACCCTTGGATCCATCG+TGG 0.734059 2.4:-69295061 MS.gene004225:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATTAAAATATTTCCAA+AGG - chr2.4:69295498-69295517 MS.gene004225:CDS 15.0%
!! AACATTAAAATATTTCCAAA+GGG - chr2.4:69295499-69295518 MS.gene004225:CDS 15.0%
!! CATAATTTCATTTATAGTAT+TGG - chr2.4:69295969-69295988 MS.gene004225:CDS 15.0%
!!! AAATTCATTTTTCATTTATC+GGG - chr2.4:69295300-69295319 MS.gene004225:CDS 15.0%
!!! ATTGTATGTTCATTATTTTT+GGG - chr2.4:69296097-69296116 MS.gene004225:CDS 15.0%
!!! GAAATTCATTTTTCATTTAT+CGG - chr2.4:69295299-69295318 MS.gene004225:CDS 15.0%
!!! TATTGTATGTTCATTATTTT+TGG - chr2.4:69296096-69296115 MS.gene004225:CDS 15.0%
!!! TTTTTTCAATTGATTTGAAT+GGG - chr2.4:69297154-69297173 MS.gene004225:intron 15.0%
!! AATTTCATTTCTATTTGGAA+GGG - chr2.4:69295089-69295108 MS.gene004225:CDS 20.0%
!! GTAGTAATTTCATTTCTATT+TGG - chr2.4:69295084-69295103 MS.gene004225:CDS 20.0%
!! TAATTTCATTTCTATTTGGA+AGG - chr2.4:69295088-69295107 MS.gene004225:CDS 20.0%
!! TAGAAATGAAATTACTACAT+AGG + chr2.4:69295082-69295101 None:intergenic 20.0%
!! TTACAAAAATGATAGGATTA+TGG - chr2.4:69296195-69296214 MS.gene004225:CDS 20.0%
!!! AAATTCTAAAAATCCCAATA+TGG - chr2.4:69296786-69296805 MS.gene004225:intron 20.0%
!!! CTTTTTTCAATTGATTTGAA+TGG - chr2.4:69297153-69297172 MS.gene004225:intron 20.0%
!!! TTGTATGTTCATTATTTTTG+GGG - chr2.4:69296098-69296117 MS.gene004225:CDS 20.0%
! AAAAATGATAGGATTATGGA+AGG - chr2.4:69296199-69296218 MS.gene004225:CDS 25.0%
! AATAAATTATGCTTCGATGA+AGG - chr2.4:69296834-69296853 MS.gene004225:intron 25.0%
! AATTTATTTCATCAGTGACA+AGG + chr2.4:69296822-69296841 None:intergenic 25.0%
! AGAGAACTTACAAAAATGAT+AGG - chr2.4:69296188-69296207 MS.gene004225:CDS 25.0%
! AGTGAAAAGAGTTCAAAATA+TGG - chr2.4:69296556-69296575 MS.gene004225:intron 25.0%
! ATAACAATAAAGCCATATCT+CGG + chr2.4:69296444-69296463 None:intergenic 25.0%
! CAATTTGCAAAAGAAATTGA+AGG - chr2.4:69296657-69296676 MS.gene004225:intron 25.0%
! CCATAAAATGTTAATAATCC+AGG + chr2.4:69297414-69297433 None:intergenic 25.0%
! GAGAATAGTTCAAGTATTTA+TGG + chr2.4:69297227-69297246 None:intergenic 25.0%
! TAAAATGTTAATAATCCAGG+TGG + chr2.4:69297411-69297430 None:intergenic 25.0%
! TTCAAAATATGGACAAATAG+CGG - chr2.4:69296567-69296586 MS.gene004225:intron 25.0%
!! AATCAATATGTTTTTCCCAT+AGG + chr2.4:69297584-69297603 None:intergenic 25.0%
!! ATCAATATGTTTTTCCCATA+GGG + chr2.4:69297583-69297602 None:intergenic 25.0%
!! CCTGGATTATTAACATTTTA+TGG - chr2.4:69297411-69297430 MS.gene004225:intron 25.0%
!! CTTAAACTTGCTTAAGTAAT+TGG - chr2.4:69296027-69296046 MS.gene004225:CDS 25.0%
!! TATCGGTAAATGTTTTCAAT+AGG - chr2.4:69295857-69295876 MS.gene004225:CDS 25.0%
!! TCAATTTCTTTTGCAAATTG+AGG + chr2.4:69296657-69296676 None:intergenic 25.0%
!!! ACTAGTTTTTCTCTATAGTA+CGG + chr2.4:69295942-69295961 None:intergenic 25.0%
!!! ATACAAAGCTACTATTTTTC+CGG - chr2.4:69296973-69296992 MS.gene004225:intron 25.0%
!!! ATGTTTTTGATTTGGTTGAA+TGG - chr2.4:69297304-69297323 MS.gene004225:intron 25.0%
!!! TGTATGTTCATTATTTTTGG+GGG - chr2.4:69296099-69296118 MS.gene004225:CDS 25.0%
AAAAGAAATTGAAGGACAAG+AGG - chr2.4:69296665-69296684 MS.gene004225:intron 30.0%
AAGGTGAAAAACAACCATAT+TGG + chr2.4:69296803-69296822 None:intergenic 30.0%
ACATCTCTTCGGTAATATTA+AGG + chr2.4:69296225-69296244 None:intergenic 30.0%
AGGAAGTTATAAGCTAAACA+AGG + chr2.4:69296154-69296173 None:intergenic 30.0%
AGGTGAAAAACAACCATATT+GGG + chr2.4:69296802-69296821 None:intergenic 30.0%
AGTATACTTCACATGATCTT+TGG - chr2.4:69295754-69295773 MS.gene004225:CDS 30.0%
CACAGAGTAATATAATTGCA+TGG + chr2.4:69295788-69295807 None:intergenic 30.0%
CATTCCTGAATAACCTTTAT+TGG - chr2.4:69295365-69295384 MS.gene004225:CDS 30.0%
CTCGTATGTTAGTTGTTAAT+GGG - chr2.4:69295327-69295346 MS.gene004225:CDS 30.0%
GATTTGAATGGGAATGTTAA+TGG - chr2.4:69297165-69297184 MS.gene004225:intron 30.0%
GGAAAAAGCAATAAATACCT+TGG + chr2.4:69295029-69295048 None:intergenic 30.0%
TAAGCATGGACAGATATTTA+GGG + chr2.4:69297038-69297057 None:intergenic 30.0%
TCAAAATGAGCTCTTATAAG+AGG + chr2.4:69297252-69297271 None:intergenic 30.0%
TCAACTCAATAAGTTAGGTT+GGG - chr2.4:69295151-69295170 MS.gene004225:CDS 30.0%
TCACTTCAACTCAATAAGTT+AGG - chr2.4:69295146-69295165 MS.gene004225:CDS 30.0%
TGCTTGAAAAATGTAACTGT+GGG + chr2.4:69295716-69295735 None:intergenic 30.0%
TTAAGCATGGACAGATATTT+AGG + chr2.4:69297039-69297058 None:intergenic 30.0%
TTATCTATATTCTCACCAGA+GGG - chr2.4:69294975-69294994 MS.gene004225:CDS 30.0%
TTCAACTCAATAAGTTAGGT+TGG - chr2.4:69295150-69295169 MS.gene004225:CDS 30.0%
TTTATCTATATTCTCACCAG+AGG - chr2.4:69294974-69294993 MS.gene004225:CDS 30.0%
! CAATTATATGAAGAGCGTAT+CGG - chr2.4:69295840-69295859 MS.gene004225:CDS 30.0%
! TAACAATCTCCAATTTGCTT+GGG - chr2.4:69296324-69296343 MS.gene004225:intron 30.0%
! TACAACAAAAGCTTTAGCTA+GGG + chr2.4:69296290-69296309 None:intergenic 30.0%
! TATCTGATCATTAAGTTGTC+TGG + chr2.4:69296266-69296285 None:intergenic 30.0%
! TCAATATGTTTTTCCCATAG+GGG + chr2.4:69297582-69297601 None:intergenic 30.0%
! TTACAACAAAAGCTTTAGCT+AGG + chr2.4:69296291-69296310 None:intergenic 30.0%
!! AAATTTTTGAGCAAGAGATC+TGG + chr2.4:69295050-69295069 None:intergenic 30.0%
!! TATGGCTTTATTGTTATACC+AGG - chr2.4:69296447-69296466 MS.gene004225:intron 30.0%
!! TGGGATGAATGTTTTTGATT+TGG - chr2.4:69297296-69297315 MS.gene004225:intron 30.0%
!!! TTTTTGATTTGGTTGAATGG+AGG - chr2.4:69297307-69297326 MS.gene004225:intron 30.0%
AAAGTTGCATTGCTGCAATA+AGG + chr2.4:69297616-69297635 None:intergenic 35.0%
ACCAAAAAGCTTATACTGTC+TGG - chr2.4:69296600-69296619 MS.gene004225:intron 35.0%
AGAGAATAATCTGCGAATTG+CGG + chr2.4:69296366-69296385 None:intergenic 35.0%
AGAGATGTTAAGTTCCGATT+CGG - chr2.4:69296237-69296256 MS.gene004225:CDS 35.0%
ATAAATACCTTGGACAAAGG+CGG + chr2.4:69295019-69295038 None:intergenic 35.0%
ATCGAACCTAAAACCTTTAG+AGG - chr2.4:69295652-69295671 MS.gene004225:CDS 35.0%
ATCGGAACTTAACATCTCTT+CGG + chr2.4:69296236-69296255 None:intergenic 35.0%
ATTTCCAACATCATCACATC+AGG + chr2.4:69295284-69295303 None:intergenic 35.0%
CCAAAAAGCTTATACTGTCT+GGG - chr2.4:69296601-69296620 MS.gene004225:intron 35.0%
CCATTAACAACTAACATACG+AGG + chr2.4:69295329-69295348 None:intergenic 35.0%
CCTCGTATGTTAGTTGTTAA+TGG - chr2.4:69295326-69295345 MS.gene004225:CDS 35.0%
CTCTCCAATAAAGGTTATTC+AGG + chr2.4:69295372-69295391 None:intergenic 35.0%
CTGCTTGAAAAATGTAACTG+TGG + chr2.4:69295717-69295736 None:intergenic 35.0%
CTTTATTGGAGAGAAACAAC+TGG - chr2.4:69295379-69295398 MS.gene004225:CDS 35.0%
GCAATAAATACCTTGGACAA+AGG + chr2.4:69295022-69295041 None:intergenic 35.0%
GCTTGAAAAATGTAACTGTG+GGG + chr2.4:69295715-69295734 None:intergenic 35.0%
TATCAGAGAACACACAAAAG+TGG + chr2.4:69296726-69296745 None:intergenic 35.0%
TCATAGTTGCACTGTCATAA+TGG + chr2.4:69296483-69296502 None:intergenic 35.0%
TCTGATTCTCTGGTTGTTAA+AGG + chr2.4:69296412-69296431 None:intergenic 35.0%
TGAAAAATACAAGCCCCTAT+GGG - chr2.4:69297566-69297585 MS.gene004225:CDS 35.0%
TGGAGGAAAAAGAATGTAAC+TGG - chr2.4:69297324-69297343 MS.gene004225:intron 35.0%
TTAGGGTTACGAAACTTGAT+AGG + chr2.4:69297021-69297040 None:intergenic 35.0%
TTGAAAAATACAAGCCCCTA+TGG - chr2.4:69297565-69297584 MS.gene004225:CDS 35.0%
! ACTGAGTTTTCAAAACCCTT+TGG + chr2.4:69295517-69295536 None:intergenic 35.0%
! AGAAGTATGAAGACTTCTCA+TGG - chr2.4:69296902-69296921 MS.gene004225:intron 35.0%
! CGGTAAATGTTTTCAATAGG+CGG - chr2.4:69295860-69295879 MS.gene004225:CDS 35.0%
! GTAACAATCTCCAATTTGCT+TGG - chr2.4:69296323-69296342 MS.gene004225:intron 35.0%
! TAATTGGAACATAGCTTGCA+TGG - chr2.4:69296043-69296062 MS.gene004225:CDS 35.0%
! TATTTTTCCGGAAACAGTGA+TGG - chr2.4:69296985-69297004 MS.gene004225:intron 35.0%
! TTCTTCAAGAGCTTGGATTT+TGG + chr2.4:69296521-69296540 None:intergenic 35.0%
!! ATCCTCAGTTGATAGAAAGA+GGG - chr2.4:69297493-69297512 MS.gene004225:CDS 35.0%
!! CAGTTGTTTCTCTCCAATAA+AGG + chr2.4:69295381-69295400 None:intergenic 35.0%
!!! TCATTATTTTTGGGGGATAG+AGG - chr2.4:69296106-69296125 MS.gene004225:CDS 35.0%
AGAATGTAGATCGGACATTG+TGG - chr2.4:69297370-69297389 MS.gene004225:intron 40.0%
AGCTTTGCTCTGGCTATAAA+TGG + chr2.4:69295594-69295613 None:intergenic 40.0%
ATTGGAGAGAAACAACTGGA+TGG - chr2.4:69295383-69295402 MS.gene004225:CDS 40.0%
CACTTAGTTCCCAAGCAAAT+TGG + chr2.4:69296336-69296355 None:intergenic 40.0%
CCAAACCTTGGTTGAAGATT+GGG - chr2.4:69297541-69297560 MS.gene004225:CDS 40.0%
CTCTTGTCACAAGTTATGTC+AGG - chr2.4:69295904-69295923 MS.gene004225:CDS 40.0%
GAAAAATGTAACTGTGGGGT+TGG + chr2.4:69295711-69295730 None:intergenic 40.0%
GCAAGTGGAGATGAAGATTA+AGG - chr2.4:69296687-69296706 MS.gene004225:intron 40.0%
GCTTTGCTCTGGCTATAAAT+GGG + chr2.4:69295593-69295612 None:intergenic 40.0%
GGCAGGAAAAGAATGTAGAT+CGG - chr2.4:69297361-69297380 MS.gene004225:intron 40.0%
GTGTGTGAGATATGAGATTG+AGG - chr2.4:69295410-69295429 MS.gene004225:CDS 40.0%
TAACTGGCATCTACCACTAT+TGG - chr2.4:69297340-69297359 MS.gene004225:intron 40.0%
TCAATCCCAATCTTCAACCA+AGG + chr2.4:69297549-69297568 None:intergenic 40.0%
TCATCTGTTCTTCAAGAGCT+TGG + chr2.4:69296528-69296547 None:intergenic 40.0%
TCCAAACCTTGGTTGAAGAT+TGG - chr2.4:69297540-69297559 MS.gene004225:CDS 40.0%
TCTTGAAGTTGCTTAAGCAC+AGG + chr2.4:69296946-69296965 None:intergenic 40.0%
TGAACCATTCAGTTGTCAAC+CGG + chr2.4:69296630-69296649 None:intergenic 40.0%
TGAGGACCAATCCTTATTGT+GGG - chr2.4:69295563-69295582 MS.gene004225:CDS 40.0%
TTGCCATGAATGACTTTCGT+GGG - chr2.4:69296863-69296882 MS.gene004225:intron 40.0%
TTTGCCATGAATGACTTTCG+TGG - chr2.4:69296862-69296881 MS.gene004225:intron 40.0%
! CATTCTTTTCCTGCCAATAG+TGG + chr2.4:69297356-69297375 None:intergenic 40.0%
! CCCAGACAGTATAAGCTTTT+TGG + chr2.4:69296604-69296623 None:intergenic 40.0%
! GTAGAGCAACAGATTTTCGA+AGG - chr2.4:69294888-69294907 MS.gene004225:CDS 40.0%
! TTATGGACTAACAGAACCCT+TGG - chr2.4:69297428-69297447 MS.gene004225:intron 40.0%
!! ACAATAAGGATTGGTCCTCA+CGG + chr2.4:69295563-69295582 None:intergenic 40.0%
!! GATCCTCAGTTGATAGAAAG+AGG - chr2.4:69297492-69297511 MS.gene004225:CDS 40.0%
!! TCCTCAGTTGATAGAAAGAG+GGG - chr2.4:69297494-69297513 MS.gene004225:CDS 40.0%
!! TGTGCTCCTCTAAAGGTTTT+AGG + chr2.4:69295661-69295680 None:intergenic 40.0%
!!! TATTTTTGGGGGATAGAGGT+GGG - chr2.4:69296110-69296129 MS.gene004225:CDS 40.0%
!!! TTATTTTTGGGGGATAGAGG+TGG - chr2.4:69296109-69296128 MS.gene004225:CDS 40.0%
AAGTTGTCTGGTCACCGAAT+CGG + chr2.4:69296254-69296273 None:intergenic 45.0%
AGACAGTGCTATCCGAGATA+TGG - chr2.4:69296429-69296448 MS.gene004225:intron 45.0%
AGACTCAATTTGAGTCCCTC+TGG + chr2.4:69294993-69295012 None:intergenic 45.0%
AGGACCAATCCTTATTGTGG+GGG - chr2.4:69295565-69295584 MS.gene004225:CDS 45.0%
ATAGACTTGCCCACCGAAAT+TGG - chr2.4:69295618-69295637 MS.gene004225:CDS 45.0%
ATTATGCTTCGATGAAGGCG+TGG - chr2.4:69296839-69296858 MS.gene004225:intron 45.0%
ATTGAAGGACAAGAGGCAAG+TGG - chr2.4:69296672-69296691 MS.gene004225:intron 45.0%
CAGGAACACGATCTTCTTCA+GGG + chr2.4:69297097-69297116 None:intergenic 45.0%
CAGGGATATAGAACCTCAAG+TGG + chr2.4:69297062-69297081 None:intergenic 45.0%
CATCATTGCAACTTCAGTCG+TGG - chr2.4:69296747-69296766 MS.gene004225:intron 45.0%
CCAACATCATCACATCAGGA+AGG + chr2.4:69295280-69295299 None:intergenic 45.0%
CCCAATCTTCAACCAAGGTT+TGG + chr2.4:69297544-69297563 None:intergenic 45.0%
CTTTCCACCATCACTGTTTC+CGG + chr2.4:69296995-69297014 None:intergenic 45.0%
GAACCTCAAGTGGTTAAGCA+TGG + chr2.4:69297052-69297071 None:intergenic 45.0%
GAGGACCAATCCTTATTGTG+GGG - chr2.4:69295564-69295583 MS.gene004225:CDS 45.0%
GATAGCACTGTCTGATTCTC+TGG + chr2.4:69296422-69296441 None:intergenic 45.0%
GATCGGACATTGTGGAAACT+CGG - chr2.4:69297378-69297397 MS.gene004225:intron 45.0%
GTCTATACAGAGCTTTGCTC+TGG + chr2.4:69295604-69295623 None:intergenic 45.0%
GTGAGGACCAATCCTTATTG+TGG - chr2.4:69295562-69295581 MS.gene004225:CDS 45.0%
TCAATGGGAACTCCAAACCT+TGG - chr2.4:69297529-69297548 MS.gene004225:CDS 45.0%
TCAGGGCAGGAAAAACTTCA+GGG + chr2.4:69297080-69297099 None:intergenic 45.0%
TGCCATGAATGACTTTCGTG+GGG - chr2.4:69296864-69296883 MS.gene004225:intron 45.0%
TGTCCATGCTTAACCACTTG+AGG - chr2.4:69297046-69297065 MS.gene004225:intron 45.0%
TGTTAAAGGAGAACGCCTAG+TGG + chr2.4:69296398-69296417 None:intergenic 45.0%
TTCAGGGCAGGAAAAACTTC+AGG + chr2.4:69297081-69297100 None:intergenic 45.0%
TTCTCTCAAATGCTGCCACT+AGG - chr2.4:69296380-69296399 MS.gene004225:intron 45.0%
TTCTCTGCACAACACGATAC+AGG + chr2.4:69296174-69296193 None:intergenic 45.0%
! CAGATTTTCGAAGGCCAGTA+CGG - chr2.4:69294897-69294916 MS.gene004225:CDS 45.0%
! CCTTCCTGATGTGATGATGT+TGG - chr2.4:69295277-69295296 MS.gene004225:CDS 45.0%
! TTTTCCGGAAACAGTGATGG+TGG - chr2.4:69296988-69297007 MS.gene004225:intron 45.0%
!! ATTGGTCCTCACGGATTAGT+CGG + chr2.4:69295554-69295573 None:intergenic 45.0%
!! ATTTTTGGGGGATAGAGGTG+GGG - chr2.4:69296111-69296130 MS.gene004225:CDS 45.0%
!! CATTTTGATCCCGATGCATG+CGG - chr2.4:69297264-69297283 MS.gene004225:intron 45.0%
!! GGATTAGTCGGTCTTTGGAT+CGG + chr2.4:69295542-69295561 None:intergenic 45.0%
!!! CTTTTTATTTATTTTTTATA+TGG - chr2.4:69295458-69295477 MS.gene004225:CDS 5.0%
AAACCCAGTACATGCCACGA+TGG + chr2.4:69297456-69297475 None:intergenic 50.0%
AAATGCCCATCCGCATGCAT+CGG + chr2.4:69297277-69297296 None:intergenic 50.0%
AACACGATCTTCTTCAGGGC+AGG + chr2.4:69297093-69297112 None:intergenic 50.0%
AAGATCCCAAGCCAACCACT+AGG - chr2.4:69295685-69295704 MS.gene004225:CDS 50.0%
AATGCCCACCACAATGCATC+AGG + chr2.4:69294932-69294951 None:intergenic 50.0%
ACATGCCACGATGGATCCAA+GGG + chr2.4:69297447-69297466 None:intergenic 50.0%
ATGCATGCGGATGGGCATTT+GGG - chr2.4:69297277-69297296 MS.gene004225:intron 50.0%
CAAAGACCGACTAATCCGTG+AGG - chr2.4:69295545-69295564 MS.gene004225:CDS 50.0%
CACCCCACGAAAGTCATTCA+TGG + chr2.4:69296869-69296888 None:intergenic 50.0%
CCAGGAACACGATCTTCTTC+AGG + chr2.4:69297098-69297117 None:intergenic 50.0%
CCTGAAGAAGATCGTGTTCC+TGG - chr2.4:69297095-69297114 MS.gene004225:intron 50.0%
CTTGGAGTGTGCTCCTCTAA+AGG + chr2.4:69295668-69295687 None:intergenic 50.0%
GAAGGGTTCCTGATGCATTG+TGG - chr2.4:69294921-69294940 MS.gene004225:CDS 50.0%
GATCCATCGTGGCATGTACT+GGG - chr2.4:69297450-69297469 MS.gene004225:intron 50.0%
GCCCCTCTTTCTATCAACTG+AGG + chr2.4:69297498-69297517 None:intergenic 50.0%
GCTTATACTGTCTGGGTGTC+CGG - chr2.4:69296608-69296627 MS.gene004225:intron 50.0%
GGGCTGTACTGCACTTCAAT+GGG - chr2.4:69297514-69297533 MS.gene004225:CDS 50.0%
GGTTCCTGATGCATTGTGGT+GGG - chr2.4:69294925-69294944 MS.gene004225:CDS 50.0%
GTGTCCGGTTGACAACTGAA+TGG - chr2.4:69296623-69296642 MS.gene004225:intron 50.0%
TACATGCCACGATGGATCCA+AGG + chr2.4:69297448-69297467 None:intergenic 50.0%
TGGAGCTGTTGAGACATGCA+TGG - chr2.4:69297185-69297204 MS.gene004225:intron 50.0%
TGGCATCTACCACTATTGGC+AGG - chr2.4:69297344-69297363 MS.gene004225:intron 50.0%
! AAATGGGCTCCCCCACAATA+AGG + chr2.4:69295577-69295596 None:intergenic 50.0%
! ATTCCCCCTGGTGCCAATTT+CGG + chr2.4:69295634-69295653 None:intergenic 50.0%
! TCGTGGCATGTACTGGGTTT+TGG - chr2.4:69297456-69297475 MS.gene004225:intron 50.0%
!! CTCACGGATTAGTCGGTCTT+TGG + chr2.4:69295547-69295566 None:intergenic 50.0%
!! TAGTGGTTGGCTTGGGATCT+TGG + chr2.4:69295686-69295705 None:intergenic 50.0%
!! TTTTTGGGGGATAGAGGTGG+GGG - chr2.4:69296112-69296131 MS.gene004225:CDS 50.0%
!!! GTTTTAGGTTCGATTCCCCC+TGG + chr2.4:69295646-69295665 None:intergenic 50.0%
AAACTCGGCACTTTGCCACC+TGG - chr2.4:69297393-69297412 MS.gene004225:intron 55.0%
AATGCCCATCCGCATGCATC+GGG + chr2.4:69297276-69297295 None:intergenic 55.0%
CAGAACCCTTGGATCCATCG+TGG - chr2.4:69297439-69297458 MS.gene004225:intron 55.0%
CGATGACGTCGTGGTTCAGA+AGG - chr2.4:69297119-69297138 MS.gene004225:intron 55.0%
GATGCATGCGGATGGGCATT+TGG - chr2.4:69297276-69297295 MS.gene004225:intron 55.0%
GGATCCATCGTGGCATGTAC+TGG - chr2.4:69297449-69297468 MS.gene004225:intron 55.0%
GGCTCCCCCACAATAAGGAT+TGG + chr2.4:69295572-69295591 None:intergenic 55.0%
GGGGCTGTACTGCACTTCAA+TGG - chr2.4:69297513-69297532 MS.gene004225:CDS 55.0%
GGGTTCCTGATGCATTGTGG+TGG - chr2.4:69294924-69294943 MS.gene004225:CDS 55.0%
GTCTAGACCGCCTTTGTCCA+AGG - chr2.4:69295009-69295028 MS.gene004225:CDS 55.0%
TCAGGAACCCTTCTCCGTAC+TGG + chr2.4:69294914-69294933 None:intergenic 55.0%
TCGAAGGCCAGTACGGAGAA+GGG - chr2.4:69294904-69294923 MS.gene004225:CDS 55.0%
TGACTTTCGTGGGGTGACTG+TGG - chr2.4:69296873-69296892 MS.gene004225:intron 55.0%
TGATCCCGATGCATGCGGAT+GGG - chr2.4:69297269-69297288 MS.gene004225:intron 55.0%
TTCGAAGGCCAGTACGGAGA+AGG - chr2.4:69294903-69294922 MS.gene004225:CDS 55.0%
TTGATCCCGATGCATGCGGA+TGG - chr2.4:69297268-69297287 MS.gene004225:intron 55.0%
! CATAATGGAGCTGCTGAGCC+TGG + chr2.4:69296468-69296487 None:intergenic 55.0%
!! GTTGGCCTAGTGGTTGGCTT+GGG + chr2.4:69295693-69295712 None:intergenic 55.0%
!! TAACTGTGGGGTTGGCCTAG+TGG + chr2.4:69295703-69295722 None:intergenic 55.0%
!! TTTTGGGGGATAGAGGTGGG+GGG - chr2.4:69296113-69296132 MS.gene004225:CDS 55.0%
CCACCGAAATTGGCACCAGG+GGG - chr2.4:69295628-69295647 MS.gene004225:CDS 60.0%
CCCACCGAAATTGGCACCAG+GGG - chr2.4:69295627-69295646 MS.gene004225:CDS 60.0%
GAACCACGACGTCATCGTCC+AGG + chr2.4:69297116-69297135 None:intergenic 60.0%
GCCCACCGAAATTGGCACCA+GGG - chr2.4:69295626-69295645 MS.gene004225:CDS 60.0%
GTTCCTGGACGATGACGTCG+TGG - chr2.4:69297110-69297129 MS.gene004225:intron 60.0%
TGCCCACCGAAATTGGCACC+AGG - chr2.4:69295625-69295644 MS.gene004225:CDS 60.0%
! CCCCTGGTGCCAATTTCGGT+GGG + chr2.4:69295630-69295649 None:intergenic 60.0%
!! GGTTGGCCTAGTGGTTGGCT+TGG + chr2.4:69295694-69295713 None:intergenic 60.0%
!! TGTGGGGTTGGCCTAGTGGT+TGG + chr2.4:69295699-69295718 None:intergenic 60.0%
AGGTGGGGGGATGGTGAGCT+TGG - chr2.4:69296126-69296145 MS.gene004225:CDS 65.0%
GGTGGGGGGATGGTGAGCTT+GGG - chr2.4:69296127-69296146 MS.gene004225:CDS 65.0%
! CCCCCTGGTGCCAATTTCGG+TGG + chr2.4:69295631-69295650 None:intergenic 65.0%
GGGGGATAGAGGTGGGGGGA+TGG - chr2.4:69296117-69296136 MS.gene004225:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 69294881 69297641 69294881 ID=MS.gene004225
chr2.4 mRNA 69294881 69297641 69294881 ID=MS.gene004225.t1;Parent=MS.gene004225
chr2.4 exon 69297492 69297641 69297492 ID=MS.gene004225.t1.exon1;Parent=MS.gene004225.t1
chr2.4 CDS 69297492 69297641 69297492 ID=cds.MS.gene004225.t1;Parent=MS.gene004225.t1
chr2.4 exon 69294881 69296332 69294881 ID=MS.gene004225.t1.exon2;Parent=MS.gene004225.t1
chr2.4 CDS 69294881 69296332 69294881 ID=cds.MS.gene004225.t1;Parent=MS.gene004225.t1
Gene Sequence

>MS.gene004225

ATGAGGCGTAGAGCAACAGATTTTCGAAGGCCAGTACGGAGAAGGGTTCCTGATGCATTGTGGTGGGCATTGTGCTGTGCAGTTGTTCTTCTATTTATCTATATTCTCACCAGAGGGACTCAAATTGAGTCTAGACCGCCTTTGTCCAAGGTATTTATTGCTTTTTCCAGATCTCTTGCTCAAAAATTTGTATGAAAACCTATGTAGTAATTTCATTTCTATTTGGAAGGGAAAATTGACTAGACTAAACAACTAGATTATATTCTCACTTCAACTCAATAAGTTAGGTTGGGATGTTTCTATTTCGATATAGACATTAAAGAGCTGAAACATAAGTTCTGTAGTGTAGAGTTTATAGTATGCTGAGATAAGCTTTATAAAATATCATTCAATTGTCCTTCCTGATGTGATGATGTTGGAAATTCATTTTTCATTTATCGGGTGTCCTCGTATGTTAGTTGTTAATGGGCTCATGCTGTTGATGCATTCCTGAATAACCTTTATTGGAGAGAAACAACTGGATGGATTTGTGTGTGAGATATGAGATTGAGGAACATTCACTCTTCTGTTTCTCTATCTTTTTATTTATTTTTTATATGGAATTCTACATCAGATAAAAACATTAAAATATTTCCAAAGGGTTTTGAAAACTCAGTATCCGATCCAAAGACCGACTAATCCGTGAGGACCAATCCTTATTGTGGGGGAGCCCATTTATAGCCAGAGCAAAGCTCTGTATAGACTTGCCCACCGAAATTGGCACCAGGGGGAATCGAACCTAAAACCTTTAGAGGAGCACACTCCAAGATCCCAAGCCAACCACTAGGCCAACCCCACAGTTACATTTTTCAAGCAGTCAACATATAGTAATGAAGTATACTTCACATGATCTTTGGATTTGAATCCATGCAATTATATTACTCTGTGCTCACATTGTTATATTTTGTTTAAAATTACTACAATTATATGAAGAGCGTATCGGTAAATGTTTTCAATAGGCGGAACAGTGATACTTTCATGTTTCTCTTGTCACAAGTTATGTCAGGCGCATTTCTTTTCCGTACTATAGAGAAAAACTAGTTTTTCTTCATAATTTCATTTATAGTATTGGAACTCTAACAGAATAATGCGTAGATCATAACAGTACTTAAACTTGCTTAAGTAATTGGAACATAGCTTGCATGGCATGCTTAGATTTTTATTTCAAAACTAGAATATTGTATGTTCATTATTTTTGGGGGATAGAGGTGGGGGGATGGTGAGCTTGGGTCCTTGTTTAGCTTATAACTTCCTGTATCGTGTTGTGCAGAGAACTTACAAAAATGATAGGATTATGGAAGGCCTTAATATTACCGAAGAGATGTTAAGTTCCGATTCGGTGACCAGACAACTTAATGATCAGATATCCCTAGCTAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAACTAAGTGCTCAGATCCGCAATTCGCAGATTATTCTCTCAAATGCTGCCACTAGGCGTTCTCCTTTAACAACCAGAGAATCAGACAGTGCTATCCGAGATATGGCTTTATTGTTATACCAGGCTCAGCAGCTCCATTATGACAGTGCAACTATGATCATGAGATTCAAAGCCAAAATCCAAGCTCTTGAAGAACAGATGAATTCTGTAAGTGAAAAGAGTTCAAAATATGGACAAATAGCGGCTGAAGAAGTACCAAAAAGCTTATACTGTCTGGGTGTCCGGTTGACAACTGAATGGTTCAAAAACCTCAATTTGCAAAAGAAATTGAAGGACAAGAGGCAAGTGGAGATGAAGATTAAGGATAAAAATCTTTACCACTTTTGTGTGTTCTCTGATAACATCATTGCAACTTCAGTCGTGGTCAATTCAACTGCAAAAAATTCTAAAAATCCCAATATGGTTGTTTTTCACCTTGTCACTGATGAAATAAATTATGCTTCGATGAAGGCGTGGTTTGCCATGAATGACTTTCGTGGGGTGACTGTGGAAGTTCAGAAGTATGAAGACTTCTCATGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAACTTCAAGACTCAGAAATACAAAGCTACTATTTTTCCGGAAACAGTGATGGTGGAAAGACACCTATCAAGTTTCGTAACCCTAAATATCTGTCCATGCTTAACCACTTGAGGTTCTATATCCCTGAAGTTTTTCCTGCCCTGAAGAAGATCGTGTTCCTGGACGATGACGTCGTGGTTCAGAAGGATCTTTCTGATCTTTTTTCAATTGATTTGAATGGGAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATACTTGAACTATTCTCATCCTCTTATAAGAGCTCATTTTGATCCCGATGCATGCGGATGGGCATTTGGGATGAATGTTTTTGATTTGGTTGAATGGAGGAAAAAGAATGTAACTGGCATCTACCACTATTGGCAGGAAAAGAATGTAGATCGGACATTGTGGAAACTCGGCACTTTGCCACCTGGATTATTAACATTTTATGGACTAACAGAACCCTTGGATCCATCGTGGCATGTACTGGGTTTTGGCTACACAAACGTTGATCCTCAGTTGATAGAAAGAGGGGCTGTACTGCACTTCAATGGGAACTCCAAACCTTGGTTGAAGATTGGGATTGAAAAATACAAGCCCCTATGGGAAAAACATATTGATTACTCGCATACCTTATTGCAGCAATGCAACTTTCATTGA
Protein sequence

>MS.gene004225.t1

MRRRATDFRRPVRRRVPDALWWALCCAVVLLFIYILTRGTQIESRPPLSKRTYKNDRIMEGLNITEEMLSSDSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQIILSNAATRRSPLTTRESDSAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQKKLKDKRQVEMKIKDKNLYHFCVFSDNIIATSVVVNSTAKNSKNPNMVVFHLVTDEINYASMKAWFAMNDFRGVTVEVQKYEDFSWLNASYVPVLKQLQDSEIQSYYFSGNSDGGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHTLLQQCNFH