Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00454.t1 | XP_024639006.1 | 90.7 | 483 | 26 | 2 | 1 | 464 | 1 | 483 | 1.50E-244 | 855.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00454.t1 | Q94IB8 | 71.4 | 479 | 118 | 2 | 1 | 460 | 1 | 479 | 1.2e-199 | 697.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00454.t1 | A0A1S2Y419 | 88.8 | 482 | 35 | 2 | 1 | 463 | 2 | 483 | 4.9e-242 | 846.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022257 | MS.gene00454 | PPI |
MS.gene00454 | MS.gene70587 | PPI |
MS.gene00454 | MS.gene074392 | PPI |
MS.gene00454 | MS.gene25914 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00454.t1 | MTR_3g054030 | 87.265 | 479 | 42 | 2 | 1 | 460 | 2 | 480 | 0.0 | 835 |
MS.gene00454.t1 | MTR_5g072020 | 87.056 | 479 | 43 | 2 | 1 | 460 | 2 | 480 | 0.0 | 833 |
MS.gene00454.t1 | MTR_1g018970 | 83.382 | 343 | 44 | 1 | 1 | 330 | 1 | 343 | 0.0 | 546 |
MS.gene00454.t1 | MTR_1g019030 | 94.737 | 95 | 5 | 0 | 370 | 464 | 33 | 127 | 5.75e-56 | 182 |
MS.gene00454.t1 | MTR_2g090820 | 72.951 | 122 | 15 | 1 | 327 | 430 | 15 | 136 | 4.48e-51 | 169 |
MS.gene00454.t1 | MTR_1g019000 | 90.541 | 74 | 7 | 0 | 291 | 364 | 21 | 94 | 8.46e-41 | 141 |
MS.gene00454.t1 | MTR_6g033290 | 24.868 | 378 | 245 | 7 | 110 | 459 | 101 | 467 | 9.40e-31 | 124 |
MS.gene00454.t1 | MTR_3g008020 | 22.835 | 381 | 230 | 14 | 109 | 452 | 100 | 453 | 3.85e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00454.t1 | AT4G36480 | 71.399 | 479 | 118 | 2 | 1 | 460 | 1 | 479 | 0.0 | 719 |
MS.gene00454.t1 | AT4G36480 | 71.399 | 479 | 118 | 2 | 1 | 460 | 1 | 479 | 0.0 | 719 |
MS.gene00454.t1 | AT4G36480 | 72.537 | 335 | 79 | 1 | 1 | 322 | 1 | 335 | 0.0 | 521 |
MS.gene00454.t1 | AT3G48780 | 26.260 | 377 | 239 | 8 | 110 | 458 | 101 | 466 | 6.09e-32 | 127 |
MS.gene00454.t1 | AT3G48780 | 26.260 | 377 | 239 | 8 | 110 | 458 | 101 | 466 | 6.09e-32 | 127 |
MS.gene00454.t1 | AT5G23670 | 25.729 | 377 | 241 | 8 | 110 | 458 | 101 | 466 | 7.32e-32 | 127 |
MS.gene00454.t1 | AT5G23670 | 25.729 | 377 | 241 | 8 | 110 | 458 | 101 | 466 | 7.32e-32 | 127 |
MS.gene00454.t1 | AT3G48790 | 26.727 | 333 | 216 | 7 | 138 | 458 | 7 | 323 | 5.20e-25 | 105 |
MS.gene00454.t1 | AT3G48790 | 26.471 | 306 | 197 | 7 | 165 | 458 | 2 | 291 | 1.10e-18 | 87.0 |
MS.gene00454.t1 | AT5G04620 | 23.096 | 407 | 246 | 12 | 82 | 447 | 70 | 450 | 5.91e-15 | 77.4 |
MS.gene00454.t1 | AT5G04620 | 21.649 | 291 | 184 | 6 | 82 | 336 | 70 | 352 | 3.47e-14 | 74.7 |
MS.gene00454.t1 | AT5G04620 | 23.684 | 342 | 209 | 11 | 132 | 447 | 2 | 317 | 7.65e-13 | 70.1 |
Find 95 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTCAATTCTGTACTCTTA+TGG | 0.150808 | 1.3:-4394563 | MS.gene00454:CDS |
CTTGTCCAATGTTGATCTTC+TGG | 0.236546 | 1.3:+4392182 | None:intergenic |
GAACATTACTTCCAAATATA+AGG | 0.240090 | 1.3:-4394025 | MS.gene00454:CDS |
CAATTCAATGATCTCATCTA+AGG | 0.245444 | 1.3:+4393324 | None:intergenic |
CTTCATTAAGAGAAGGAATA+AGG | 0.245598 | 1.3:+4395835 | None:intergenic |
GCAAACTATCTTGGGCTTAT+AGG | 0.246504 | 1.3:-4394873 | MS.gene00454:intron |
TTTGGTGTGCTTGGAAGTTC+TGG | 0.252911 | 1.3:-4393256 | MS.gene00454:CDS |
ATTCAATTCTGTACTCTTAT+GGG | 0.273197 | 1.3:-4394562 | MS.gene00454:CDS |
AGATCTTATAACTGCTTCTA+TGG | 0.281324 | 1.3:-4393104 | MS.gene00454:CDS |
CGTGAACACTACTATAGATT+TGG | 0.297627 | 1.3:-4397095 | MS.gene00454:CDS |
CTCAAATTTGTTAACAGATT+GGG | 0.307471 | 1.3:+4392653 | None:intergenic |
TCTCATCTAAGGGTGCTATT+TGG | 0.316042 | 1.3:+4393335 | None:intergenic |
ATCTACAACTCTTGCACTTC+CGG | 0.317386 | 1.3:+4393048 | None:intergenic |
AACTTCTTTACCATTAACTA+TGG | 0.324145 | 1.3:+4394911 | None:intergenic |
TTTGCTTCAGCAAACTATCT+TGG | 0.327119 | 1.3:-4394882 | MS.gene00454:CDS |
TCGTCTGCTTTAGAGAAATA+TGG | 0.340008 | 1.3:-4394753 | MS.gene00454:intron |
GTTCTCTAAAGTTTCTCTTA+AGG | 0.340162 | 1.3:+4394044 | None:intergenic |
GGGCCACATACCATAGTTAA+TGG | 0.344158 | 1.3:-4394921 | MS.gene00454:CDS |
CCTCAAATTTGTTAACAGAT+TGG | 0.355331 | 1.3:+4392652 | None:intergenic |
TTTAATTTCAAATAAACAAT+TGG | 0.366490 | 1.3:+4392395 | None:intergenic |
TTCATTAAGAGAAGGAATAA+GGG | 0.368868 | 1.3:+4395836 | None:intergenic |
AACATTACTTCCAAATATAA+GGG | 0.378447 | 1.3:-4394024 | MS.gene00454:CDS |
TTGCTTCAGCAAACTATCTT+GGG | 0.384774 | 1.3:-4394881 | MS.gene00454:CDS |
GGAACAACATTGCTGTGTTA+TGG | 0.388623 | 1.3:-4392631 | MS.gene00454:CDS |
AGATGAGATCATTGAATTGA+AGG | 0.398282 | 1.3:-4393320 | MS.gene00454:CDS |
ATGGCAGCGCTTGCAAGATA+TGG | 0.398789 | 1.3:+4392704 | None:intergenic |
ATTAGATTATTTGTTTCTGC+AGG | 0.402211 | 1.3:-4392141 | MS.gene00454:CDS |
CTGGATGAGAGCAACTCATT+TGG | 0.408220 | 1.3:-4393274 | MS.gene00454:CDS |
AGCAACTCATTTGGTGTGCT+TGG | 0.418751 | 1.3:-4393265 | MS.gene00454:CDS |
GAAAGAAGATTCTGTATTTG+TGG | 0.419300 | 1.3:-4392211 | MS.gene00454:CDS |
CCAATCTGTTAACAAATTTG+AGG | 0.421013 | 1.3:-4392652 | MS.gene00454:CDS |
CTGTGCTTCTAGAAAGATAA+AGG | 0.428167 | 1.3:+4394097 | None:intergenic |
GTTGCGGCATTAGTCCTTGA+TGG | 0.432516 | 1.3:-4392072 | MS.gene00454:CDS |
TGTTTCTTATGCAGTGCTGT+TGG | 0.439961 | 1.3:-4394942 | MS.gene00454:intron |
AAATAAACAATTGGTGACTC+TGG | 0.449523 | 1.3:+4392404 | None:intergenic |
GTTTCTTATGCAGTGCTGTT+GGG | 0.450878 | 1.3:-4394941 | MS.gene00454:intron |
TAAGAGTACAGAATTGAATC+AGG | 0.459771 | 1.3:+4394566 | None:intergenic |
CAGGGATGAGGGAGTCCACT+GGG | 0.462856 | 1.3:-4394133 | MS.gene00454:CDS |
AAGGACATCAATAGCTGTAA+TGG | 0.466767 | 1.3:+4392685 | None:intergenic |
ACAAATAATCTAATTCCTAC+AGG | 0.471070 | 1.3:+4392150 | None:intergenic |
TTGATGAACTATGTGATGAA+TGG | 0.477203 | 1.3:-4395869 | MS.gene00454:CDS |
AGAGGTGTCACTGAACACTA+TGG | 0.483049 | 1.3:-4393232 | MS.gene00454:CDS |
TGCTTCTATGGGACATGCAT+TGG | 0.488113 | 1.3:-4393092 | MS.gene00454:CDS |
AGAGAAGGAATAAGGGGTTG+TGG | 0.488349 | 1.3:+4395843 | None:intergenic |
TTTGAAATTAAAGAAGTCTA+CGG | 0.489519 | 1.3:-4392384 | MS.gene00454:CDS |
TTACCATTAACTATGGTATG+TGG | 0.491128 | 1.3:+4394918 | None:intergenic |
TTGAAATTAAAGAAGTCTAC+GGG | 0.495926 | 1.3:-4392383 | MS.gene00454:CDS |
GACTGCATTTCTTACACGCT+CGG | 0.496128 | 1.3:+4392322 | None:intergenic |
TTGCAGCGGTTGAGTAGCTC+TGG | 0.503674 | 1.3:-4392752 | MS.gene00454:intron |
ACAGGGATGAGGGAGTCCAC+TGG | 0.504900 | 1.3:-4394134 | MS.gene00454:intron |
TGATGAACTATGTGATGAAT+GGG | 0.517879 | 1.3:-4395868 | MS.gene00454:CDS |
TTCTCGCTTCACAGTCAAGA+TGG | 0.524313 | 1.3:+4394609 | None:intergenic |
GATCTTATAACTGCTTCTAT+GGG | 0.526348 | 1.3:-4393103 | MS.gene00454:CDS |
GCTTTAGAGAAATATGGTGT+TGG | 0.529087 | 1.3:-4394747 | MS.gene00454:intron |
GGCGTCTGAGTCATTGCAAA+GGG | 0.530572 | 1.3:-4392094 | MS.gene00454:CDS |
TGAGTCATTGCAAAGGGTTG+CGG | 0.541711 | 1.3:-4392088 | MS.gene00454:CDS |
TGTAATTACCTCTCTAGCAC+TGG | 0.543434 | 1.3:+4395795 | None:intergenic |
TTGGTTCCTGTGGTCCCCGT+GGG | 0.553198 | 1.3:-4394728 | MS.gene00454:CDS |
ATAAAACCCACGGGGACCAC+AGG | 0.555797 | 1.3:+4394722 | None:intergenic |
AAAACTACAGCTCGTGCAGA+AGG | 0.556151 | 1.3:+4397052 | None:intergenic |
CAATTGTTCCATAAAACCCA+CGG | 0.560580 | 1.3:+4394712 | None:intergenic |
TAAAAGACCCTTGTCAAACA+AGG | 0.561710 | 1.3:-4396811 | MS.gene00454:intron |
AACATTGCTGTGTTATGGAA+AGG | 0.565817 | 1.3:-4392626 | MS.gene00454:intron |
TTAGATTATTTGTTTCTGCA+GGG | 0.571207 | 1.3:-4392140 | MS.gene00454:CDS |
GGGTTCATTTATGACCATCA+AGG | 0.574762 | 1.3:+4392058 | None:intergenic |
GTGCTTGGAAGTTCTGGAAG+AGG | 0.575580 | 1.3:-4393250 | MS.gene00454:CDS |
TGTCATTGAAGCTCTCTACC+AGG | 0.576630 | 1.3:-4393977 | MS.gene00454:intron |
AATTCAATGATCTCATCTAA+GGG | 0.581827 | 1.3:+4393325 | None:intergenic |
AGCAGGGATAGCACTGAACA+TGG | 0.585997 | 1.3:+4394532 | None:intergenic |
CATGCATTGGCCACAGAAGG+AGG | 0.588651 | 1.3:-4393079 | MS.gene00454:CDS |
AATTGTTCCATAAAACCCAC+GGG | 0.590052 | 1.3:+4394713 | None:intergenic |
GGACATGCATTGGCCACAGA+AGG | 0.590206 | 1.3:-4393082 | MS.gene00454:CDS |
GTCCACTGGGGAATACAGAA+TGG | 0.593062 | 1.3:-4394120 | MS.gene00454:CDS |
ATGAACCGCCAGTGCTAGAG+AGG | 0.602412 | 1.3:-4395803 | MS.gene00454:intron |
GCAACAAACCTTGTTTGACA+AGG | 0.602533 | 1.3:+4396803 | None:intergenic |
ACAGAAGGAGGATTCTGCAC+CGG | 0.604655 | 1.3:-4393067 | MS.gene00454:CDS |
TGTGACTCTTCATTAAGAGA+AGG | 0.608867 | 1.3:+4395828 | None:intergenic |
GGTGCAGAATCCTCCTTCTG+TGG | 0.610091 | 1.3:+4393069 | None:intergenic |
AAATATGGTGTTGGTTCCTG+TGG | 0.610886 | 1.3:-4394738 | MS.gene00454:CDS |
TCATTAAGAGAAGGAATAAG+GGG | 0.615684 | 1.3:+4395837 | None:intergenic |
GTTGGTTCCTGTGGTCCCCG+TGG | 0.621440 | 1.3:-4394729 | MS.gene00454:CDS |
AGGCGTCTGAGTCATTGCAA+AGG | 0.621561 | 1.3:-4392095 | MS.gene00454:CDS |
GGCTTCCAGAAGATCAACAT+TGG | 0.624427 | 1.3:-4392187 | MS.gene00454:CDS |
CAACAAACCTTGTTTGACAA+GGG | 0.631045 | 1.3:+4396804 | None:intergenic |
AGAAGATTCTGTATTTGTGG+CGG | 0.636151 | 1.3:-4392208 | MS.gene00454:CDS |
GCAGCGCTTGCAAGATATGG+AGG | 0.640184 | 1.3:+4392707 | None:intergenic |
ACATTACTTCCAAATATAAG+GGG | 0.660136 | 1.3:-4394023 | MS.gene00454:CDS |
GACAAGTGTCGATTACCTGT+AGG | 0.662221 | 1.3:-4392165 | MS.gene00454:CDS |
TTCAGAGTCTGATCTACACA+AGG | 0.672146 | 1.3:-4392115 | MS.gene00454:CDS |
AATTACCTCTCTAGCACTGG+CGG | 0.685088 | 1.3:+4395798 | None:intergenic |
GGCCATTCTGTATTCCCCAG+TGG | 0.696448 | 1.3:+4394118 | None:intergenic |
AGGGATGAGGGAGTCCACTG+GGG | 0.708870 | 1.3:-4394132 | MS.gene00454:CDS |
TTATCTTTCTAGAAGCACAG+TGG | 0.725983 | 1.3:-4394094 | MS.gene00454:CDS |
AGGGATAGCACTGAACATGG+TGG | 0.741093 | 1.3:+4394535 | None:intergenic |
ATTGTTCCATAAAACCCACG+GGG | 0.815269 | 1.3:+4394714 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTCAATATGTATTTATAA+AGG | - | chr1.3:4395565-4395584 | MS.gene00454:intron | 10.0% |
!! | CAAAAAATTTAAGAATTTAA+AGG | + | chr1.3:4393886-4393905 | None:intergenic | 10.0% |
!!! | ATAAATTTATATCTTTTAAC+AGG | - | chr1.3:4395028-4395047 | MS.gene00454:intron | 10.0% |
!!! | ATAATTTTTGTTAAACTATA+GGG | - | chr1.3:4393689-4393708 | MS.gene00454:intron | 10.0% |
!!! | TAAAAATTTTCATGTTTTAA+GGG | + | chr1.3:4393732-4393751 | None:intergenic | 10.0% |
!!! | TAAATTTATATCTTTTAACA+GGG | - | chr1.3:4395029-4395048 | MS.gene00454:intron | 10.0% |
!!! | TTAAAACATGAAAATTTTTA+GGG | - | chr1.3:4393732-4393751 | MS.gene00454:intron | 10.0% |
!!! | TTTAATTTCAAATAAACAAT+TGG | + | chr1.3:4396788-4396807 | None:intergenic | 10.0% |
!! | AAATAACTATTACAACTTAA+TGG | + | chr1.3:4395693-4395712 | None:intergenic | 15.0% |
!! | ATTTGCTTATTTAATCAAAA+TGG | - | chr1.3:4392599-4392618 | MS.gene00454:intron | 15.0% |
!! | TAAAATGAGAAAAATATATG+AGG | + | chr1.3:4393430-4393449 | None:intergenic | 15.0% |
!! | TTATGTGAAAATAATAAAGT+TGG | - | chr1.3:4392526-4392545 | MS.gene00454:intron | 15.0% |
!! | TTGTAATATCTTAACATTAA+TGG | + | chr1.3:4392690-4392709 | None:intergenic | 15.0% |
!!! | ATTTTAATGATTTATATCAC+TGG | - | chr1.3:4394848-4394867 | MS.gene00454:intron | 15.0% |
!!! | CATAATTTTTGTTAAACTAT+AGG | - | chr1.3:4393688-4393707 | MS.gene00454:intron | 15.0% |
!!! | CTAAAAATTTTCATGTTTTA+AGG | + | chr1.3:4393733-4393752 | None:intergenic | 15.0% |
!!! | CTATATTTTGAAATATAAAG+TGG | + | chr1.3:4394924-4394943 | None:intergenic | 15.0% |
!!! | CTTAAAACATGAAAATTTTT+AGG | - | chr1.3:4393731-4393750 | MS.gene00454:intron | 15.0% |
!!! | GTTATCTTTTATCATATTTT+GGG | - | chr1.3:4394011-4394030 | MS.gene00454:CDS | 15.0% |
!!! | TGTTATCTTTTATCATATTT+TGG | - | chr1.3:4394010-4394029 | MS.gene00454:CDS | 15.0% |
!! | AAATTTAAGAATTTAAAGGG+TGG | + | chr1.3:4393882-4393901 | None:intergenic | 20.0% |
!! | AACATTACTTCCAAATATAA+GGG | - | chr1.3:4395156-4395175 | MS.gene00454:intron | 20.0% |
!! | CCCAAAAAAAAAAATGATAT+GGG | + | chr1.3:4394362-4394381 | None:intergenic | 20.0% |
!! | TATGATAAAAGATAACAGTT+AGG | + | chr1.3:4394007-4394026 | None:intergenic | 20.0% |
!! | TCCAACTAAGTAATAAAAAT+AGG | - | chr1.3:4396276-4396295 | MS.gene00454:intron | 20.0% |
!! | TCTGAAGAAAAAAAAAATCA+AGG | + | chr1.3:4395818-4395837 | None:intergenic | 20.0% |
!!! | ATTTCTTATTTCAGTTTTGT+TGG | - | chr1.3:4396918-4396937 | MS.gene00454:intron | 20.0% |
!!! | ATTTTGAAATATAAAGTGGA+TGG | + | chr1.3:4394920-4394939 | None:intergenic | 20.0% |
!!! | CCCATATCATTTTTTTTTTT+GGG | - | chr1.3:4394359-4394378 | MS.gene00454:intron | 20.0% |
!!! | CTGTTATTTATTATGATTTG+TGG | - | chr1.3:4396029-4396048 | MS.gene00454:intron | 20.0% |
!!! | CTTTTTAAAAAATTACTGTC+TGG | - | chr1.3:4393175-4393194 | MS.gene00454:intron | 20.0% |
!!! | GATCTTTGAATTTTTTATGT+TGG | - | chr1.3:4393138-4393157 | MS.gene00454:intron | 20.0% |
!!! | GCATTTGTTATATTATCAAT+GGG | - | chr1.3:4392548-4392567 | MS.gene00454:intron | 20.0% |
!!! | GGTTTTACTTCTTATTAAAA+TGG | - | chr1.3:4394869-4394888 | MS.gene00454:intron | 20.0% |
!!! | GTTCAAAAAAAAATTTTCCT+CGG | - | chr1.3:4394770-4394789 | MS.gene00454:intron | 20.0% |
!!! | TAAATTTGGAATTTTGGATT+GGG | + | chr1.3:4392932-4392951 | None:intergenic | 20.0% |
!!! | TATAGAAGTTTTACTTTTAG+TGG | - | chr1.3:4392306-4392325 | MS.gene00454:intron | 20.0% |
!!! | TCCCATATCATTTTTTTTTT+TGG | - | chr1.3:4394358-4394377 | MS.gene00454:intron | 20.0% |
!!! | TCCTATTTTTATTACTTAGT+TGG | + | chr1.3:4396280-4396299 | None:intergenic | 20.0% |
!!! | TTAAATTTGGAATTTTGGAT+TGG | + | chr1.3:4392933-4392952 | None:intergenic | 20.0% |
!!! | TTTGAAATTAAAGAAGTCTA+CGG | - | chr1.3:4396796-4396815 | MS.gene00454:intron | 20.0% |
!!! | TTTTTTTTTCTTCAGAATTC+TGG | - | chr1.3:4395822-4395841 | MS.gene00454:CDS | 20.0% |
! | AACCACATAAGGTAATATTA+AGG | + | chr1.3:4393537-4393556 | None:intergenic | 25.0% |
! | AACTTCTTTACCATTAACTA+TGG | + | chr1.3:4394272-4394291 | None:intergenic | 25.0% |
! | AATATAATAGCAACACAAAC+AGG | + | chr1.3:4395611-4395630 | None:intergenic | 25.0% |
! | AATTCAATGATCTCATCTAA+GGG | + | chr1.3:4395858-4395877 | None:intergenic | 25.0% |
! | ACAAATAATCTAATTCCTAC+AGG | + | chr1.3:4397033-4397052 | None:intergenic | 25.0% |
! | ACATAAGGTAATATTAAGGA+AGG | + | chr1.3:4393533-4393552 | None:intergenic | 25.0% |
! | ACATTACTTCCAAATATAAG+GGG | - | chr1.3:4395157-4395176 | MS.gene00454:intron | 25.0% |
! | ACATTTCCTTGTCTTAAAAA+GGG | - | chr1.3:4393598-4393617 | MS.gene00454:intron | 25.0% |
! | ACTTTGATTCTTAGATACAT+TGG | - | chr1.3:4396713-4396732 | MS.gene00454:intron | 25.0% |
! | ATCATCAAGTATAATGTCAT+CGG | + | chr1.3:4394805-4394824 | None:intergenic | 25.0% |
! | ATTCAATTCTGTACTCTTAT+GGG | - | chr1.3:4394618-4394637 | MS.gene00454:intron | 25.0% |
! | GAACATTACTTCCAAATATA+AGG | - | chr1.3:4395155-4395174 | MS.gene00454:intron | 25.0% |
! | GCCCAAAAAAAAAAATGATA+TGG | + | chr1.3:4394363-4394382 | None:intergenic | 25.0% |
! | TAATGTACATTTGTCTATTG+TGG | - | chr1.3:4392739-4392758 | MS.gene00454:CDS | 25.0% |
! | TACATTTCCTTGTCTTAAAA+AGG | - | chr1.3:4393597-4393616 | MS.gene00454:intron | 25.0% |
! | TATACTGAACATAAAATGAG+AGG | - | chr1.3:4396211-4396230 | MS.gene00454:intron | 25.0% |
! | TATATTATCAATGGGACTTT+AGG | - | chr1.3:4392556-4392575 | MS.gene00454:intron | 25.0% |
! | TATTTAATCAAAATGGTAGC+CGG | - | chr1.3:4392606-4392625 | MS.gene00454:intron | 25.0% |
! | TCAAAATATAAAGACAAGCT+AGG | + | chr1.3:4394712-4394731 | None:intergenic | 25.0% |
! | TTCATTAAGAGAAGGAATAA+GGG | + | chr1.3:4393347-4393366 | None:intergenic | 25.0% |
! | TTCCTTAATATTACCTTATG+TGG | - | chr1.3:4393532-4393551 | MS.gene00454:intron | 25.0% |
! | TTGAAATTAAAGAAGTCTAC+GGG | - | chr1.3:4396797-4396816 | MS.gene00454:intron | 25.0% |
!! | AAAAATTTTCCTCGGTTTTT+TGG | - | chr1.3:4394778-4394797 | MS.gene00454:intron | 25.0% |
!! | AATATAACGCCTCAAATTTT+TGG | + | chr1.3:4395184-4395203 | None:intergenic | 25.0% |
!! | AATCTTGTTCAATTTTTCCT+CGG | - | chr1.3:4394738-4394757 | MS.gene00454:CDS | 25.0% |
!! | ATATCGTTTTCGTATTTTAC+TGG | - | chr1.3:4395887-4395906 | MS.gene00454:intron | 25.0% |
!! | CAAAATTCCAAATTTAAGAC+TGG | - | chr1.3:4392936-4392955 | MS.gene00454:intron | 25.0% |
!! | CATTAAAATAGTTCTACATG+TGG | + | chr1.3:4394837-4394856 | None:intergenic | 25.0% |
!! | CATTTTATGTTCAGTATACA+TGG | + | chr1.3:4396209-4396228 | None:intergenic | 25.0% |
!! | TGTTTGTGTTGCTATTATAT+TGG | - | chr1.3:4395610-4395629 | MS.gene00454:intron | 25.0% |
!! | TTACGATGTTTTATAAAGCT+CGG | - | chr1.3:4392988-4393007 | MS.gene00454:intron | 25.0% |
!! | TTTTTGTTAAACTATAGGGT+TGG | - | chr1.3:4393693-4393712 | MS.gene00454:intron | 25.0% |
!!! | AAAATCCTTGTTTTAATTGC+AGG | + | chr1.3:4396682-4396701 | None:intergenic | 25.0% |
!!! | AATTTTCATGTTTTAAGGGT+CGG | + | chr1.3:4393728-4393747 | None:intergenic | 25.0% |
!!! | ATTAGATTATTTGTTTCTGC+AGG | - | chr1.3:4397039-4397058 | MS.gene00454:CDS | 25.0% |
!!! | CAGTCTTAAATTTGGAATTT+TGG | + | chr1.3:4392938-4392957 | None:intergenic | 25.0% |
!!! | CTCAAATTTGTTAACAGATT+GGG | + | chr1.3:4396530-4396549 | None:intergenic | 25.0% |
!!! | GCGAGAATATCAAATTTTTT+AGG | - | chr1.3:4394587-4394606 | MS.gene00454:CDS | 25.0% |
!!! | GGCATTTGTTATATTATCAA+TGG | - | chr1.3:4392547-4392566 | MS.gene00454:intron | 25.0% |
!!! | GTAGTTTTTGGATTCAATAT+TGG | - | chr1.3:4392143-4392162 | MS.gene00454:CDS | 25.0% |
!!! | GTTTTTACCTTATGTTTTGA+AGG | - | chr1.3:4392274-4392293 | MS.gene00454:intron | 25.0% |
!!! | TTAGATTATTTGTTTCTGCA+GGG | - | chr1.3:4397040-4397059 | MS.gene00454:CDS | 25.0% |
AAACATTGAGATATTAGAGC+AGG | + | chr1.3:4396402-4396421 | None:intergenic | 30.0% | |
AACATTGAGATATTAGAGCA+GGG | + | chr1.3:4396401-4396420 | None:intergenic | 30.0% | |
AAGATCCACAGTCTTAAATT+TGG | + | chr1.3:4393063-4393082 | None:intergenic | 30.0% | |
ACCAAGTATGGTATTGTTAT+GGG | - | chr1.3:4396156-4396175 | MS.gene00454:intron | 30.0% | |
ACTTAATGGTTGAAAAAACC+AGG | + | chr1.3:4395679-4395698 | None:intergenic | 30.0% | |
ACTTAATGTTCTGTATTCAC+AGG | - | chr1.3:4396942-4396961 | MS.gene00454:intron | 30.0% | |
ACTTGTGAACTTTGTTCTTA+TGG | - | chr1.3:4393561-4393580 | MS.gene00454:intron | 30.0% | |
AGATCTTATAACTGCTTCTA+TGG | - | chr1.3:4396076-4396095 | MS.gene00454:intron | 30.0% | |
AGATGAGATCATTGAATTGA+AGG | - | chr1.3:4395860-4395879 | MS.gene00454:CDS | 30.0% | |
ATATATGCAAGCTAAACAGT+AGG | - | chr1.3:4394165-4394184 | MS.gene00454:intron | 30.0% | |
ATGTGGTGTATATAAAGCTT+GGG | - | chr1.3:4392864-4392883 | MS.gene00454:intron | 30.0% | |
CAAATGTCCTTCAAAACATA+AGG | + | chr1.3:4392284-4392303 | None:intergenic | 30.0% | |
CAAGTAGCAAAAGTCATTTA+AGG | + | chr1.3:4395655-4395674 | None:intergenic | 30.0% | |
CAATTCAATGATCTCATCTA+AGG | + | chr1.3:4395859-4395878 | None:intergenic | 30.0% | |
CAGTAAATTGTGCTATATGA+CGG | - | chr1.3:4395362-4395381 | MS.gene00454:intron | 30.0% | |
CATAGTTCATCAATTTCCTA+CGG | + | chr1.3:4393304-4393323 | None:intergenic | 30.0% | |
CCAATCTGTTAACAAATTTG+AGG | - | chr1.3:4396528-4396547 | MS.gene00454:intron | 30.0% | |
CTAATTCAACCTTACAAAAC+CGG | + | chr1.3:4393033-4393052 | None:intergenic | 30.0% | |
CTTAATGGTTGAAAAAACCA+GGG | + | chr1.3:4395678-4395697 | None:intergenic | 30.0% | |
CTTCATTAAGAGAAGGAATA+AGG | + | chr1.3:4393348-4393367 | None:intergenic | 30.0% | |
CTTGTGAACTTTGTTCTTAT+GGG | - | chr1.3:4393562-4393581 | MS.gene00454:intron | 30.0% | |
GAAAGAAGATTCTGTATTTG+TGG | - | chr1.3:4396969-4396988 | MS.gene00454:intron | 30.0% | |
GATCTTATAACTGCTTCTAT+GGG | - | chr1.3:4396077-4396096 | MS.gene00454:intron | 30.0% | |
GATTCAATTCTGTACTCTTA+TGG | - | chr1.3:4394617-4394636 | MS.gene00454:intron | 30.0% | |
GTAAGATCCAGTCTTAAATT+TGG | + | chr1.3:4392946-4392965 | None:intergenic | 30.0% | |
GTATACATGGAAATCAAAGA+TGG | + | chr1.3:4396196-4396215 | None:intergenic | 30.0% | |
GTCATCAATTGTAAGTTGTA+AGG | - | chr1.3:4394329-4394348 | MS.gene00454:intron | 30.0% | |
TATGTGGTGTATATAAAGCT+TGG | - | chr1.3:4392863-4392882 | MS.gene00454:intron | 30.0% | |
TATTACTTAGTTGGAGTCTA+AGG | + | chr1.3:4396271-4396290 | None:intergenic | 30.0% | |
TCATTAAGAGAAGGAATAAG+GGG | + | chr1.3:4393346-4393365 | None:intergenic | 30.0% | |
TGATGAACTATGTGATGAAT+GGG | - | chr1.3:4393312-4393331 | MS.gene00454:CDS | 30.0% | |
TGTGACATTGAAAACAAGAA+GGG | + | chr1.3:4393978-4393997 | None:intergenic | 30.0% | |
TTACCATTAACTATGGTATG+TGG | + | chr1.3:4394265-4394284 | None:intergenic | 30.0% | |
TTGATGAACTATGTGATGAA+TGG | - | chr1.3:4393311-4393330 | MS.gene00454:CDS | 30.0% | |
! | AAATAAACAATTGGTGACTC+TGG | + | chr1.3:4396779-4396798 | None:intergenic | 30.0% |
! | AGAGGTAATTACATTTTCTC+TGG | - | chr1.3:4393395-4393414 | MS.gene00454:intron | 30.0% |
! | AGCTTTATATACACCACATA+AGG | + | chr1.3:4392863-4392882 | None:intergenic | 30.0% |
! | AGGCGTTGTTTATATAAATC+TGG | - | chr1.3:4394978-4394997 | MS.gene00454:intron | 30.0% |
! | ATATCTTTTAACAGGGATGA+GGG | - | chr1.3:4395036-4395055 | MS.gene00454:intron | 30.0% |
! | ATTTAAGACTGGATCTTACA+TGG | - | chr1.3:4392947-4392966 | MS.gene00454:intron | 30.0% |
! | GATCTTAAAGTTTGTTCTTG+AGG | - | chr1.3:4394500-4394519 | MS.gene00454:intron | 30.0% |
! | TAAGAGTACAGAATTGAATC+AGG | + | chr1.3:4394617-4394636 | None:intergenic | 30.0% |
! | TATATCTTTTAACAGGGATG+AGG | - | chr1.3:4395035-4395054 | MS.gene00454:intron | 30.0% |
! | TCAATCCAAATTTAAGACTG+TGG | - | chr1.3:4393055-4393074 | MS.gene00454:CDS | 30.0% |
! | TTTAAGACTGGATCTTACAT+GGG | - | chr1.3:4392948-4392967 | MS.gene00454:intron | 30.0% |
! | TTTTGAACAAGAAAAAACCG+AGG | + | chr1.3:4394758-4394777 | None:intergenic | 30.0% |
!! | AAGAACAAACTTTAAGATCG+AGG | + | chr1.3:4394499-4394518 | None:intergenic | 30.0% |
!! | CCTCAAATTTGTTAACAGAT+TGG | + | chr1.3:4396531-4396550 | None:intergenic | 30.0% |
!! | CTGATTGCTTTTAAACCTAA+AGG | + | chr1.3:4395304-4395323 | None:intergenic | 30.0% |
!! | GTTCTCTAAAGTTTCTCTTA+AGG | + | chr1.3:4395139-4395158 | None:intergenic | 30.0% |
!! | GTTTTTGGATTCAATATTGG+TGG | - | chr1.3:4392146-4392165 | MS.gene00454:CDS | 30.0% |
!! | TTTTTAGTAGTTCTGTGTGT+TGG | - | chr1.3:4392762-4392781 | MS.gene00454:intron | 30.0% |
!!! | ATTTTTGGTCCCCTTATATT+TGG | + | chr1.3:4395169-4395188 | None:intergenic | 30.0% |
!!! | CATTTTTTTTTTTGGGCACT+GGG | - | chr1.3:4394366-4394385 | MS.gene00454:intron | 30.0% |
!!! | TCATTTTTTTTTTTGGGCAC+TGG | - | chr1.3:4394365-4394384 | MS.gene00454:intron | 30.0% |
AAAAATTACTGTCTGGACTC+TGG | - | chr1.3:4393182-4393201 | MS.gene00454:intron | 35.0% | |
AACATTGCTGTGTTATGGAA+AGG | - | chr1.3:4396554-4396573 | MS.gene00454:intron | 35.0% | |
AAGACTGTGGATCTTACATA+GGG | - | chr1.3:4393068-4393087 | MS.gene00454:CDS | 35.0% | |
AAGCTCTCATGTGATTTCAT+AGG | - | chr1.3:4393940-4393959 | MS.gene00454:intron | 35.0% | |
AAGGACATCAATAGCTGTAA+TGG | + | chr1.3:4396498-4396517 | None:intergenic | 35.0% | |
AATTGTTCCATAAAACCCAC+GGG | + | chr1.3:4394470-4394489 | None:intergenic | 35.0% | |
AATTTGTGCTTAATGTCCGT+AGG | - | chr1.3:4393285-4393304 | MS.gene00454:CDS | 35.0% | |
AGAAGATTCTGTATTTGTGG+CGG | - | chr1.3:4396972-4396991 | MS.gene00454:intron | 35.0% | |
AGTCCTACAGACAGTAAATA+CGG | + | chr1.3:4394402-4394421 | None:intergenic | 35.0% | |
ATAAATCTGGTGTTTCAAGC+AGG | - | chr1.3:4394991-4395010 | MS.gene00454:intron | 35.0% | |
ATAAGGGGACCAAAAATTTG+AGG | - | chr1.3:4395172-4395191 | MS.gene00454:intron | 35.0% | |
CAATTGTTCCATAAAACCCA+CGG | + | chr1.3:4394471-4394490 | None:intergenic | 35.0% | |
CACAAGTACAAAACCACATA+AGG | + | chr1.3:4393548-4393567 | None:intergenic | 35.0% | |
CACCAAGTATGGTATTGTTA+TGG | - | chr1.3:4396155-4396174 | MS.gene00454:intron | 35.0% | |
CATCATGCAAGTGAAACATT+AGG | - | chr1.3:4394112-4394131 | MS.gene00454:CDS | 35.0% | |
CATCTATACAGTGTTTCCAA+TGG | - | chr1.3:4395267-4395286 | MS.gene00454:intron | 35.0% | |
CGTGAACACTACTATAGATT+TGG | - | chr1.3:4392085-4392104 | MS.gene00454:CDS | 35.0% | |
CTAAGTCAACCTTACAAAAC+CGG | + | chr1.3:4392908-4392927 | None:intergenic | 35.0% | |
CTTTGCCTGCAATTAAAACA+AGG | - | chr1.3:4396674-4396693 | MS.gene00454:intron | 35.0% | |
GAAAGTAACTGTCAGATCAA+AGG | + | chr1.3:4396583-4396602 | None:intergenic | 35.0% | |
GAATTGTACAAGAACCAACA+TGG | + | chr1.3:4393227-4393246 | None:intergenic | 35.0% | |
GAGAGGAAAGATTGTAAATG+TGG | - | chr1.3:4396228-4396247 | MS.gene00454:intron | 35.0% | |
GTGACATTGAAAACAAGAAG+GGG | + | chr1.3:4393977-4393996 | None:intergenic | 35.0% | |
GTGTGACATTGAAAACAAGA+AGG | + | chr1.3:4393979-4393998 | None:intergenic | 35.0% | |
TAAAAGACCCTTGTCAAACA+AGG | - | chr1.3:4392369-4392388 | MS.gene00454:CDS | 35.0% | |
TAAGACTGTGGATCTTACAT+AGG | - | chr1.3:4393067-4393086 | MS.gene00454:CDS | 35.0% | |
TAGGATTACAGTCTTGACTT+TGG | - | chr1.3:4394131-4394150 | MS.gene00454:CDS | 35.0% | |
TCCCATAACAATACCATACT+TGG | + | chr1.3:4396160-4396179 | None:intergenic | 35.0% | |
TGACATTGAAAACAAGAAGG+GGG | + | chr1.3:4393976-4393995 | None:intergenic | 35.0% | |
TGATCAACTTAACCCTGTTA+TGG | + | chr1.3:4393816-4393835 | None:intergenic | 35.0% | |
TGTGACTCTTCATTAAGAGA+AGG | + | chr1.3:4393355-4393374 | None:intergenic | 35.0% | |
TTAAGACTGGATCTTACATG+GGG | - | chr1.3:4392949-4392968 | MS.gene00454:intron | 35.0% | |
TTACTTAACATGTGCCCTTA+GGG | + | chr1.3:4396319-4396338 | None:intergenic | 35.0% | |
TTGCTTCAGCAAACTATCTT+GGG | - | chr1.3:4394299-4394318 | MS.gene00454:intron | 35.0% | |
TTGTCTTAAAAAGGGTCAGT+TGG | - | chr1.3:4393606-4393625 | MS.gene00454:intron | 35.0% | |
TTTGCTTCAGCAAACTATCT+TGG | - | chr1.3:4394298-4394317 | MS.gene00454:intron | 35.0% | |
! | AAAACCGGCTTATAAGGTAA+GGG | + | chr1.3:4393018-4393037 | None:intergenic | 35.0% |
! | ACAGAGTTTTCAGTACATAC+TGG | + | chr1.3:4395978-4395997 | None:intergenic | 35.0% |
! | ACAGATTGGGATTTTCATCA+AGG | + | chr1.3:4396517-4396536 | None:intergenic | 35.0% |
! | ATAGTTCTACATGTGGTATC+TGG | + | chr1.3:4394830-4394849 | None:intergenic | 35.0% |
! | ATCCCTGCTTTCTCTAAAAA+AGG | - | chr1.3:4394662-4394681 | MS.gene00454:intron | 35.0% |
! | CAACAAACCTTGTTTGACAA+GGG | + | chr1.3:4392379-4392398 | None:intergenic | 35.0% |
! | CTGTGCTTCTAGAAAGATAA+AGG | + | chr1.3:4395086-4395105 | None:intergenic | 35.0% |
! | GGTAATTACATTTTCTCTGG+AGG | - | chr1.3:4393398-4393417 | MS.gene00454:intron | 35.0% |
! | TAGCAAGAGCTACTCTTTTT+GGG | + | chr1.3:4396342-4396361 | None:intergenic | 35.0% |
! | TAGTTCTGTGTGTTGGAAAT+AGG | - | chr1.3:4392769-4392788 | MS.gene00454:intron | 35.0% |
! | TTATCTTTCTAGAAGCACAG+TGG | - | chr1.3:4395086-4395105 | MS.gene00454:intron | 35.0% |
! | TTGTTTGACAAGGGTCTTTT+AGG | + | chr1.3:4392370-4392389 | None:intergenic | 35.0% |
!! | ATGAATGTGTGTTACTTCTG+TGG | - | chr1.3:4392469-4392488 | MS.gene00454:intron | 35.0% |
!! | CGGTTTTGTAAGGTTGAATT+AGG | - | chr1.3:4393031-4393050 | MS.gene00454:intron | 35.0% |
!! | GCTTTAGAGAAATATGGTGT+TGG | - | chr1.3:4394433-4394452 | MS.gene00454:intron | 35.0% |
!! | TCGTCTGCTTTAGAGAAATA+TGG | - | chr1.3:4394427-4394446 | MS.gene00454:intron | 35.0% |
!!! | AACTGACCCTTTTTAAGACA+AGG | + | chr1.3:4393607-4393626 | None:intergenic | 35.0% |
!!! | AATTTTAGTTTGCATGCAGC+AGG | + | chr1.3:4395766-4395785 | None:intergenic | 35.0% |
!!! | CTCCTTTTTTAGAGAAAGCA+GGG | + | chr1.3:4394667-4394686 | None:intergenic | 35.0% |
!!! | CTTGTTTTAATTGCAGGCAA+AGG | + | chr1.3:4396676-4396695 | None:intergenic | 35.0% |
!!! | TCTCCTTTTTTAGAGAAAGC+AGG | + | chr1.3:4394668-4394687 | None:intergenic | 35.0% |
AACAAGACTCCCATTGTAGT+GGG | + | chr1.3:4393852-4393871 | None:intergenic | 40.0% | |
ACAACCCTTACCTTATAAGC+CGG | - | chr1.3:4393011-4393030 | MS.gene00454:intron | 40.0% | |
ACCACATAAGGCATATCTCA+AGG | + | chr1.3:4392851-4392870 | None:intergenic | 40.0% | |
ACTTTGTTCTTATGGGCTTG+TGG | - | chr1.3:4393569-4393588 | MS.gene00454:intron | 40.0% | |
AGAACCAACATGGAACGATA+TGG | + | chr1.3:4393217-4393236 | None:intergenic | 40.0% | |
ATAGTAGCCATCATCAACCA+AGG | + | chr1.3:4396365-4396384 | None:intergenic | 40.0% | |
ATCTACAACTCTTGCACTTC+CGG | + | chr1.3:4396135-4396154 | None:intergenic | 40.0% | |
ATGCAAACTAGAGGAAAAGC+CGG | + | chr1.3:4392628-4392647 | None:intergenic | 40.0% | |
ATTATGCCACGCTCATCATT+TGG | - | chr1.3:4393632-4393651 | MS.gene00454:intron | 40.0% | |
ATTGTTCCATAAAACCCACG+GGG | + | chr1.3:4394469-4394488 | None:intergenic | 40.0% | |
CATGAAAGACAAGATCTACC+TGG | + | chr1.3:4395224-4395243 | None:intergenic | 40.0% | |
CTAACCATATCGTTCCATGT+TGG | - | chr1.3:4393210-4393229 | MS.gene00454:intron | 40.0% | |
CTGATGACTATCAAGGCATA+TGG | - | chr1.3:4393661-4393680 | MS.gene00454:intron | 40.0% | |
CTTGTCCAATGTTGATCTTC+TGG | + | chr1.3:4397001-4397020 | None:intergenic | 40.0% | |
GAAAAGCAACATGAGGGAAA+GGG | + | chr1.3:4394537-4394556 | None:intergenic | 40.0% | |
GAGATATTAGAGCAGGGAAA+TGG | + | chr1.3:4396395-4396414 | None:intergenic | 40.0% | |
GAGTTGTAGATCACCAAGTA+TGG | - | chr1.3:4396144-4396163 | MS.gene00454:intron | 40.0% | |
GCAAACTATCTTGGGCTTAT+AGG | - | chr1.3:4394307-4394326 | MS.gene00454:intron | 40.0% | |
GGAACAACATTGCTGTGTTA+TGG | - | chr1.3:4396549-4396568 | MS.gene00454:intron | 40.0% | |
GTTACTTAACATGTGCCCTT+AGG | + | chr1.3:4396320-4396339 | None:intergenic | 40.0% | |
GTTGGAAATAGGCTTCATTG+CGG | - | chr1.3:4392780-4392799 | MS.gene00454:intron | 40.0% | |
TAACTTCGCATGCAAACTAG+AGG | + | chr1.3:4392637-4392656 | None:intergenic | 40.0% | |
TATGTTGTGCGGTTGAAAAG+TGG | - | chr1.3:4392658-4392677 | MS.gene00454:CDS | 40.0% | |
TGAAAACTCTGTTCTAGCGT+GGG | - | chr1.3:4395986-4396005 | MS.gene00454:intron | 40.0% | |
TGCGAAGTTAGTATGTTGTG+CGG | - | chr1.3:4392647-4392666 | MS.gene00454:CDS | 40.0% | |
TGTAATTACCTCTCTAGCAC+TGG | + | chr1.3:4393388-4393407 | None:intergenic | 40.0% | |
TGTTTCTTATGCAGTGCTGT+TGG | - | chr1.3:4394238-4394257 | MS.gene00454:intron | 40.0% | |
TTAAATCAGTATCCAGCCCA+AGG | + | chr1.3:4395486-4395505 | None:intergenic | 40.0% | |
TTACAGTCTTGACTTTGGAC+AGG | - | chr1.3:4394136-4394155 | MS.gene00454:intron | 40.0% | |
TTCAGAGTCTGATCTACACA+AGG | - | chr1.3:4397065-4397084 | MS.gene00454:CDS | 40.0% | |
TTGCAGTAGTGTCCATGATT+TGG | - | chr1.3:4396618-4396637 | MS.gene00454:intron | 40.0% | |
TTTGTGCACAAGCCAAATCA+TGG | + | chr1.3:4396633-4396652 | None:intergenic | 40.0% | |
! | AAAACCGGCTTATAAGGTGA+GGG | + | chr1.3:4392893-4392912 | None:intergenic | 40.0% |
! | CAAAACCGGCTTATAAGGTA+AGG | + | chr1.3:4393019-4393038 | None:intergenic | 40.0% |
! | CAATGTTTTCAACCTTGCAG+CGG | - | chr1.3:4396414-4396433 | MS.gene00454:intron | 40.0% |
! | CCTTACAAAACCGGCTTATA+AGG | + | chr1.3:4392899-4392918 | None:intergenic | 40.0% |
! | CTGACAGTTACTTTCGTTGA+TGG | - | chr1.3:4396588-4396607 | MS.gene00454:intron | 40.0% |
! | GCAACAAACCTTGTTTGACA+AGG | + | chr1.3:4392380-4392399 | None:intergenic | 40.0% |
! | GTAGCAAGAGCTACTCTTTT+TGG | + | chr1.3:4396343-4396362 | None:intergenic | 40.0% |
! | GTTTCTTATGCAGTGCTGTT+GGG | - | chr1.3:4394239-4394258 | MS.gene00454:intron | 40.0% |
! | TGTGTTTACTGCTGATAACG+AGG | - | chr1.3:4394215-4394234 | MS.gene00454:intron | 40.0% |
! | TTTGACAAGGGTCTTTTAGG+AGG | + | chr1.3:4392367-4392386 | None:intergenic | 40.0% |
!! | AAATATGGTGTTGGTTCCTG+TGG | - | chr1.3:4394442-4394461 | MS.gene00454:intron | 40.0% |
!! | AGCTTTGCTCTGGCTTTAAT+TGG | - | chr1.3:4395414-4395433 | MS.gene00454:intron | 40.0% |
!! | CCTTATAAGCCGGTTTTGTA+AGG | - | chr1.3:4392896-4392915 | MS.gene00454:intron | 40.0% |
!! | CGGTTTTGTAAGGTTGACTT+AGG | - | chr1.3:4392906-4392925 | MS.gene00454:intron | 40.0% |
!! | CGTGGGTTTTATGGAACAAT+TGG | - | chr1.3:4394469-4394488 | MS.gene00454:intron | 40.0% |
!! | GCTTTGCTCTGGCTTTAATT+GGG | - | chr1.3:4395415-4395434 | MS.gene00454:intron | 40.0% |
!! | TAAGTTGATCAGACTCTACC+TGG | - | chr1.3:4393825-4393844 | MS.gene00454:intron | 40.0% |
!! | TCTCATCTAAGGGTGCTATT+TGG | + | chr1.3:4395848-4395867 | None:intergenic | 40.0% |
AAAACTACAGCTCGTGCAGA+AGG | + | chr1.3:4392131-4392150 | None:intergenic | 45.0% | |
AAGAGTAGCTCTTGCTACCT+TGG | - | chr1.3:4396345-4396364 | MS.gene00454:intron | 45.0% | |
ACCAATCCCACCATCCATTA+GGG | + | chr1.3:4395446-4395465 | None:intergenic | 45.0% | |
AGAGAAGGAATAAGGGGTTG+TGG | + | chr1.3:4393340-4393359 | None:intergenic | 45.0% | |
AGCCAGAGCAAAGCTCTATA+TGG | + | chr1.3:4395409-4395428 | None:intergenic | 45.0% | |
CACAGTCAAGATGGACATCT+GGG | + | chr1.3:4394565-4394584 | None:intergenic | 45.0% | |
CACTTGTACCAGCTGATCAA+TGG | - | chr1.3:4394955-4394974 | MS.gene00454:intron | 45.0% | |
CCGCAAGTTGCAAGAAAAAG+CGG | + | chr1.3:4395339-4395358 | None:intergenic | 45.0% | |
CTGAAAACTCTGTTCTAGCG+TGG | - | chr1.3:4395985-4396004 | MS.gene00454:intron | 45.0% | |
CTGGATGAGAGCAACTCATT+TGG | - | chr1.3:4395906-4395925 | MS.gene00454:intron | 45.0% | |
GAACAAGACTCCCATTGTAG+TGG | + | chr1.3:4393853-4393872 | None:intergenic | 45.0% | |
GACTGCATTTCTTACACGCT+CGG | + | chr1.3:4396861-4396880 | None:intergenic | 45.0% | |
GCAGAGGAAAAGCAACATGA+GGG | + | chr1.3:4394543-4394562 | None:intergenic | 45.0% | |
GCCTTGAGATATGCCTTATG+TGG | - | chr1.3:4392847-4392866 | MS.gene00454:intron | 45.0% | |
GGAAAAGCAACATGAGGGAA+AGG | + | chr1.3:4394538-4394557 | None:intergenic | 45.0% | |
GGCATATCTCAAGGCAATGA+AGG | + | chr1.3:4392842-4392861 | None:intergenic | 45.0% | |
GGCTTCCAGAAGATCAACAT+TGG | - | chr1.3:4396993-4397012 | MS.gene00454:intron | 45.0% | |
GGGCCACATACCATAGTTAA+TGG | - | chr1.3:4394259-4394278 | MS.gene00454:intron | 45.0% | |
GTCCATATAGAGCTTTGCTC+TGG | - | chr1.3:4395404-4395423 | MS.gene00454:intron | 45.0% | |
TCACAGTCAAGATGGACATC+TGG | + | chr1.3:4394566-4394585 | None:intergenic | 45.0% | |
TGAGTCATTGCAAAGGGTTG+CGG | - | chr1.3:4397092-4397111 | MS.gene00454:CDS | 45.0% | |
TGCTTCTATGGGACATGCAT+TGG | - | chr1.3:4396088-4396107 | MS.gene00454:intron | 45.0% | |
TGGCCGTATTTACTGTCTGT+AGG | - | chr1.3:4394396-4394415 | MS.gene00454:intron | 45.0% | |
TGGTAGTCATGGCCATAACA+GGG | - | chr1.3:4393801-4393820 | MS.gene00454:intron | 45.0% | |
TGTCATTGAAGCTCTCTACC+AGG | - | chr1.3:4395203-4395222 | MS.gene00454:intron | 45.0% | |
TTAATTGGGATCCCCCCTAA+TGG | - | chr1.3:4395429-4395448 | MS.gene00454:intron | 45.0% | |
TTCTCGCTTCACAGTCAAGA+TGG | + | chr1.3:4394574-4394593 | None:intergenic | 45.0% | |
TTGTACCAGCTGATCAATGG+AGG | - | chr1.3:4394958-4394977 | MS.gene00454:intron | 45.0% | |
! | AAGTTTTCTACCTCGTGACC+TGG | - | chr1.3:4393781-4393800 | MS.gene00454:intron | 45.0% |
! | AATTACCTCTCTAGCACTGG+CGG | + | chr1.3:4393385-4393404 | None:intergenic | 45.0% |
! | ATGACGGTGCCAATTTCTGT+GGG | - | chr1.3:4395378-4395397 | MS.gene00454:intron | 45.0% |
! | CAAAACCGGCTTATAAGGTG+AGG | + | chr1.3:4392894-4392913 | None:intergenic | 45.0% |
! | CTTGCTAACTTGTGCCCTAA+GGG | - | chr1.3:4396302-4396321 | MS.gene00454:intron | 45.0% |
! | TACAATGTGCCACTATGCCA+GGG | + | chr1.3:4393762-4393781 | None:intergenic | 45.0% |
! | TATGACGGTGCCAATTTCTG+TGG | - | chr1.3:4395377-4395396 | MS.gene00454:intron | 45.0% |
! | TCTGCACGAGCTGTAGTTTT+TGG | - | chr1.3:4392131-4392150 | MS.gene00454:CDS | 45.0% |
! | TGACTTGCAATTGTGAAGCC+TGG | + | chr1.3:4396755-4396774 | None:intergenic | 45.0% |
! | TTACAATGTGCCACTATGCC+AGG | + | chr1.3:4393763-4393782 | None:intergenic | 45.0% |
! | TTTGGTGTGCTTGGAAGTTC+TGG | - | chr1.3:4395924-4395943 | MS.gene00454:intron | 45.0% |
!! | AGAGGTGTCACTGAACACTA+TGG | - | chr1.3:4395948-4395967 | MS.gene00454:intron | 45.0% |
!! | AGCAACTCATTTGGTGTGCT+TGG | - | chr1.3:4395915-4395934 | MS.gene00454:intron | 45.0% |
!! | ATGACTTTTGCTACTTGCCC+TGG | - | chr1.3:4395658-4395677 | MS.gene00454:intron | 45.0% |
!! | ATGGACTAGCCCACAGAAAT+TGG | + | chr1.3:4395390-4395409 | None:intergenic | 45.0% |
!! | CTTGCTACCTTGGTTGATGA+TGG | - | chr1.3:4396355-4396374 | MS.gene00454:intron | 45.0% |
!! | GACAAGTGTCGATTACCTGT+AGG | - | chr1.3:4397015-4397034 | MS.gene00454:intron | 45.0% |
!! | GTGAGTGCTGATGACTATCA+AGG | - | chr1.3:4393654-4393673 | MS.gene00454:intron | 45.0% |
!! | TGTGTGTTACTTCTGTGGAG+TGG | - | chr1.3:4392474-4392493 | MS.gene00454:intron | 45.0% |
!!! | AAAATTTTTAGGGCGAGCCC+TGG | - | chr1.3:4393742-4393761 | MS.gene00454:intron | 45.0% |
!!! | CCGCTTTTTCTTGCAACTTG+CGG | - | chr1.3:4395336-4395355 | MS.gene00454:intron | 45.0% |
!! | AAAAAATTTAAGAATTTAAA+GGG | + | chr1.3:4393885-4393904 | None:intergenic | 5.0% |
AAAGGTTGTGAGCGCTCCAT+TGG | + | chr1.3:4395286-4395305 | None:intergenic | 50.0% | |
AATCCCACCATCCATTAGGG+GGG | + | chr1.3:4395443-4395462 | None:intergenic | 50.0% | |
AATGCCGCAATTAGGCTGCT+AGG | + | chr1.3:4392812-4392831 | None:intergenic | 50.0% | |
ACAGAAGGAGGATTCTGCAC+CGG | - | chr1.3:4396113-4396132 | MS.gene00454:intron | 50.0% | |
AGCAGCCTAATTGCGGCATT+TGG | - | chr1.3:4392812-4392831 | MS.gene00454:intron | 50.0% | |
AGGCGTCTGAGTCATTGCAA+AGG | - | chr1.3:4397085-4397104 | MS.gene00454:CDS | 50.0% | |
ATGCCGCAATTAGGCTGCTA+GGG | + | chr1.3:4392811-4392830 | None:intergenic | 50.0% | |
ATGGCAGCGCTTGCAAGATA+TGG | + | chr1.3:4396479-4396498 | None:intergenic | 50.0% | |
CAACATGAGGGAAAGGGAAC+GGG | + | chr1.3:4394531-4394550 | None:intergenic | 50.0% | |
CAATCCCACCATCCATTAGG+GGG | + | chr1.3:4395444-4395463 | None:intergenic | 50.0% | |
CACTCACCAAATGATGAGCG+TGG | + | chr1.3:4393641-4393660 | None:intergenic | 50.0% | |
CCAATCCCACCATCCATTAG+GGG | + | chr1.3:4395445-4395464 | None:intergenic | 50.0% | |
CCTTAGGGCACAAGTTAGCA+AGG | + | chr1.3:4396304-4396323 | None:intergenic | 50.0% | |
CTACCTGGACCCACTACAAT+GGG | - | chr1.3:4393840-4393859 | MS.gene00454:intron | 50.0% | |
CTGGTAGTCATGGCCATAAC+AGG | - | chr1.3:4393800-4393819 | MS.gene00454:intron | 50.0% | |
CTGTGGAGTGGAGCTGTATA+AGG | - | chr1.3:4392486-4392505 | MS.gene00454:intron | 50.0% | |
CTGTTATGGCCATGACTACC+AGG | + | chr1.3:4393802-4393821 | None:intergenic | 50.0% | |
GACCAATCCCACCATCCATT+AGG | + | chr1.3:4395447-4395466 | None:intergenic | 50.0% | |
GCAACATGAGGGAAAGGGAA+CGG | + | chr1.3:4394532-4394551 | None:intergenic | 50.0% | |
GCAACCCAAATGCCGCAATT+AGG | + | chr1.3:4392820-4392839 | None:intergenic | 50.0% | |
GCAGCCTAATTGCGGCATTT+GGG | - | chr1.3:4392813-4392832 | MS.gene00454:intron | 50.0% | |
GGCAGAGGAAAAGCAACATG+AGG | + | chr1.3:4394544-4394563 | None:intergenic | 50.0% | |
GGCGTCTGAGTCATTGCAAA+GGG | - | chr1.3:4397086-4397105 | MS.gene00454:CDS | 50.0% | |
GGCTACTGCACGAAAATACC+AGG | - | chr1.3:4396734-4396753 | MS.gene00454:intron | 50.0% | |
GTCATCGGACCAAAAAACCG+AGG | + | chr1.3:4394790-4394809 | None:intergenic | 50.0% | |
GTCCACTGGGGAATACAGAA+TGG | - | chr1.3:4395060-4395079 | MS.gene00454:intron | 50.0% | |
GTTGCGGCATTAGTCCTTGA+TGG | - | chr1.3:4397108-4397127 | MS.gene00454:CDS | 50.0% | |
TCTACCTGGACCCACTACAA+TGG | - | chr1.3:4393839-4393858 | MS.gene00454:intron | 50.0% | |
! | AGCAGGGATAGCACTGAACA+TGG | + | chr1.3:4394651-4394670 | None:intergenic | 50.0% |
! | AGGGATAGCACTGAACATGG+TGG | + | chr1.3:4394648-4394667 | None:intergenic | 50.0% |
! | ATGGAGCGCTCACAACCTTT+AGG | - | chr1.3:4395286-4395305 | MS.gene00454:intron | 50.0% |
! | CCTTGCTAACTTGTGCCCTA+AGG | - | chr1.3:4396301-4396320 | MS.gene00454:intron | 50.0% |
!! | GTGCTTGGAAGTTCTGGAAG+AGG | - | chr1.3:4395930-4395949 | MS.gene00454:intron | 50.0% |
!!! | TTTTTTGGGCACTGGGCTGA+TGG | - | chr1.3:4394373-4394392 | MS.gene00454:intron | 50.0% |
ACCTCGTGACCTGGTAGTCA+TGG | - | chr1.3:4393790-4393809 | MS.gene00454:intron | 55.0% | |
AGAGCTACTCAACCGCTGCA+AGG | + | chr1.3:4396429-4396448 | None:intergenic | 55.0% | |
AGCCCAAGGACCGACTAATC+CGG | + | chr1.3:4395472-4395491 | None:intergenic | 55.0% | |
ATAAAACCCACGGGGACCAC+AGG | + | chr1.3:4394461-4394480 | None:intergenic | 55.0% | |
ATGAACCGCCAGTGCTAGAG+AGG | - | chr1.3:4393377-4393396 | MS.gene00454:intron | 55.0% | |
CAACGCCTCCATTGATCAGC+TGG | + | chr1.3:4394966-4394985 | None:intergenic | 55.0% | |
CAAGATGGACATCTGGGCAG+AGG | + | chr1.3:4394559-4394578 | None:intergenic | 55.0% | |
GCAGCCCTCACCTTATAAGC+CGG | - | chr1.3:4392886-4392905 | MS.gene00454:intron | 55.0% | |
GCAGCGCTTGCAAGATATGG+AGG | + | chr1.3:4396476-4396495 | None:intergenic | 55.0% | |
GGCCATTCTGTATTCCCCAG+TGG | + | chr1.3:4395065-4395084 | None:intergenic | 55.0% | |
GGTGCAGAATCCTCCTTCTG+TGG | + | chr1.3:4396114-4396133 | None:intergenic | 55.0% | |
TGCCGCAATTAGGCTGCTAG+GGG | + | chr1.3:4392810-4392829 | None:intergenic | 55.0% | |
TTGCAGCGGTTGAGTAGCTC+TGG | - | chr1.3:4396428-4396447 | MS.gene00454:intron | 55.0% | |
TTGGGATCCCCCCTAATGGA+TGG | - | chr1.3:4395433-4395452 | MS.gene00454:intron | 55.0% | |
! | CATGCATTGGCCACAGAAGG+AGG | - | chr1.3:4396101-4396120 | MS.gene00454:intron | 55.0% |
! | GATCCCCCCTAATGGATGGT+GGG | - | chr1.3:4395437-4395456 | MS.gene00454:intron | 55.0% |
! | GGACATGCATTGGCCACAGA+AGG | - | chr1.3:4396098-4396117 | MS.gene00454:intron | 55.0% |
! | TGTGGTCCCCGTGGGTTTTA+TGG | - | chr1.3:4394460-4394479 | MS.gene00454:intron | 55.0% |
!! | ACTCCCATTGTAGTGGGTCC+AGG | + | chr1.3:4393846-4393865 | None:intergenic | 55.0% |
!! | CCCCTAATGGATGGTGGGAT+TGG | - | chr1.3:4395442-4395461 | MS.gene00454:intron | 55.0% |
!! | GATTGGTCCCCCGGATTAGT+CGG | - | chr1.3:4395459-4395478 | MS.gene00454:intron | 55.0% |
ACAGGGATGAGGGAGTCCAC+TGG | - | chr1.3:4395046-4395065 | MS.gene00454:intron | 60.0% | |
AGGGATGAGGGAGTCCACTG+GGG | - | chr1.3:4395048-4395067 | MS.gene00454:intron | 60.0% | |
CAGGGATGAGGGAGTCCACT+GGG | - | chr1.3:4395047-4395066 | MS.gene00454:intron | 60.0% | |
CCAAGGACCGACTAATCCGG+GGG | + | chr1.3:4395469-4395488 | None:intergenic | 60.0% | |
CCCAAGGACCGACTAATCCG+GGG | + | chr1.3:4395470-4395489 | None:intergenic | 60.0% | |
CGCAATTAGGCTGCTAGGGG+CGG | + | chr1.3:4392807-4392826 | None:intergenic | 60.0% | |
CGCCCCTAGCAGCCTAATTG+CGG | - | chr1.3:4392805-4392824 | MS.gene00454:intron | 60.0% | |
GCCATGACTACCAGGTCACG+AGG | + | chr1.3:4393794-4393813 | None:intergenic | 60.0% | |
GCCCAAGGACCGACTAATCC+GGG | + | chr1.3:4395471-4395490 | None:intergenic | 60.0% | |
TTGGTTCCTGTGGTCCCCGT+GGG | - | chr1.3:4394452-4394471 | MS.gene00454:intron | 60.0% | |
! | GGATCCCCCCTAATGGATGG+TGG | - | chr1.3:4395436-4395455 | MS.gene00454:intron | 60.0% |
!! | CCCCGGATTAGTCGGTCCTT+GGG | - | chr1.3:4395467-4395486 | MS.gene00454:intron | 60.0% |
!! | GGATTAGTCGGTCCTTGGGC+TGG | - | chr1.3:4395471-4395490 | MS.gene00454:intron | 60.0% |
!! | TTTGGGCACTGGGCTGATGG+TGG | - | chr1.3:4394376-4394395 | MS.gene00454:intron | 60.0% |
TAGGGCGAGCCCTGGCATAG+TGG | - | chr1.3:4393750-4393769 | MS.gene00454:intron | 65.0% | |
! | GTTGGTTCCTGTGGTCCCCG+TGG | - | chr1.3:4394451-4394470 | MS.gene00454:intron | 65.0% |
!! | CCCCCGGATTAGTCGGTCCT+TGG | - | chr1.3:4395466-4395485 | MS.gene00454:intron | 65.0% |
!! | GGATGGTGGGATTGGTCCCC+CGG | - | chr1.3:4395450-4395469 | MS.gene00454:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 4392062 | 4397140 | 4392062 | ID=MS.gene00454 |
chr1.3 | mRNA | 4392062 | 4397140 | 4392062 | ID=MS.gene00454.t1;Parent=MS.gene00454 |
chr1.3 | exon | 4397035 | 4397140 | 4397035 | ID=MS.gene00454.t1.exon1;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4397035 | 4397140 | 4397035 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4396812 | 4396906 | 4396812 | ID=MS.gene00454.t1.exon2;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4396812 | 4396906 | 4396812 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4395804 | 4395895 | 4395804 | ID=MS.gene00454.t1.exon3;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4395804 | 4395895 | 4395804 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4394874 | 4394950 | 4394874 | ID=MS.gene00454.t1.exon4;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4394874 | 4394950 | 4394874 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4394712 | 4394762 | 4394712 | ID=MS.gene00454.t1.exon5;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4394712 | 4394762 | 4394712 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4394503 | 4394635 | 4394503 | ID=MS.gene00454.t1.exon6;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4394503 | 4394635 | 4394503 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4393978 | 4394152 | 4393978 | ID=MS.gene00454.t1.exon7;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4393978 | 4394152 | 4393978 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4393225 | 4393365 | 4393225 | ID=MS.gene00454.t1.exon8;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4393225 | 4393365 | 4393225 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4393042 | 4393137 | 4393042 | ID=MS.gene00454.t1.exon9;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4393042 | 4393137 | 4393042 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4392627 | 4392768 | 4392627 | ID=MS.gene00454.t1.exon10;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4392627 | 4392768 | 4392627 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4392337 | 4392446 | 4392337 | ID=MS.gene00454.t1.exon11;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4392337 | 4392446 | 4392337 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
chr1.3 | exon | 4392062 | 4392238 | 4392062 | ID=MS.gene00454.t1.exon12;Parent=MS.gene00454.t1 |
chr1.3 | CDS | 4392062 | 4392238 | 4392062 | ID=cds.MS.gene00454.t1;Parent=MS.gene00454.t1 |
Gene Sequence |
Protein sequence |