AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005058


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005058.t1 MTR_1g079770 99.428 699 4 0 1 699 1 699 0.0 1429
MS.gene005058.t1 MTR_1g079770 99.309 579 4 0 1 579 1 579 0.0 1184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005058.t1 AT1G71270 83.090 686 115 1 14 699 23 707 0.0 1196
MS.gene005058.t1 AT1G71300 77.536 690 148 2 16 699 13 701 0.0 1120
MS.gene005058.t1 AT1G71300 73.234 736 144 5 16 699 13 747 0.0 1101

Find 129 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACACTTTGTTGAAGTATT+TGG 0.142382 1.2:-61914252 None:intergenic
AAACTCACTTGTACTTTAAA+AGG 0.194550 1.2:-61914273 None:intergenic
GCAACATCCTATGATTTAAT+TGG 0.226169 1.2:+61915647 MS.gene005058:CDS
AAGTATTTGGATATTTGTTT+TGG 0.230134 1.2:-61914239 None:intergenic
AGAAACACCGTTTGTAGTTT+TGG 0.244653 1.2:-61919219 None:intergenic
AACTCTGCTAAGTGGATTTC+AGG 0.248051 1.2:+61912190 MS.gene005058:CDS
ATCCACTTAAACTCTGAGTT+TGG 0.250844 1.2:+61919034 MS.gene005058:CDS
TATTATCACAATCATGAATT+TGG 0.261483 1.2:-61912151 None:intergenic
CTCATACATGATTGAAGATA+TGG 0.264600 1.2:-61920510 None:intergenic
GCAAGAGAAGTCTATGGATA+TGG 0.265601 1.2:+61912692 MS.gene005058:CDS
GCAACAGTTATAGGTTTATC+AGG 0.284406 1.2:-61920275 None:intergenic
CGCTTTATACTTACAGGCTT+TGG 0.287857 1.2:-61920127 None:intergenic
TCCACTTCCGCAACAGTTAT+AGG 0.293677 1.2:-61920284 None:intergenic
TTAGTATAATCTCTAAGTTT+TGG 0.301178 1.2:-61911851 None:intergenic
TCCACTTAAACTCTGAGTTT+GGG 0.308316 1.2:+61919035 MS.gene005058:CDS
AGTGGAGTTGGATTCAATTC+AGG 0.310032 1.2:+61911898 MS.gene005058:CDS
TTGCATTTCGCAAACTGTTC+AGG 0.341180 1.2:-61918934 None:intergenic
TTGGTTTATACAGGTCCTTT+TGG 0.364770 1.2:+61917339 MS.gene005058:intron
GAGCTTGCAGAAGCTGCTTA+TGG 0.365008 1.2:+61916509 MS.gene005058:CDS
CCTTCTAGTGCATTTGATCT+AGG 0.372542 1.2:+61910710 MS.gene005058:CDS
ATTGCAGCTTGAACTGAATC+TGG 0.380544 1.2:+61919137 MS.gene005058:intron
TTAAATCATTAAAATGCTCT+TGG 0.392587 1.2:-61920089 None:intergenic
TGATAATATCTTGTCACATA+TGG 0.393000 1.2:+61912166 MS.gene005058:CDS
CTCTGAGTTTGGGGATGGTC+AGG 0.393038 1.2:+61919045 MS.gene005058:CDS
ACCTATAACTGTTGCGGAAG+TGG 0.396596 1.2:+61920283 MS.gene005058:CDS
CTTCAATCATGTATGAGATT+AGG 0.397107 1.2:+61920516 MS.gene005058:CDS
TCGGAGGCGGATTCCATGCT+TGG 0.397429 1.2:+61917885 MS.gene005058:CDS
CCCACCAGGGATCCTCTTGA+TGG 0.398438 1.2:-61920462 None:intergenic
ATTTCAGGAAATTGATGAAC+CGG 0.399043 1.2:+61916425 MS.gene005058:intron
ATCCATATGAAGTTCTGTTC+AGG 0.405654 1.2:+61916487 MS.gene005058:CDS
TTTATTTACCAGGCTGAGAT+TGG 0.409163 1.2:+61912642 MS.gene005058:intron
AATTCTGCAAGAGAAGTCTA+TGG 0.414810 1.2:+61912686 MS.gene005058:CDS
TCGTATAGTAAAGTAGCAAT+TGG 0.417834 1.2:-61920427 None:intergenic
CCTATAGCATCATAGCAGTT+TGG 0.418595 1.2:-61917393 None:intergenic
ATTGTTAGATGGACTTCAAC+AGG 0.419031 1.2:+61910899 MS.gene005058:CDS
CTCCTGAACAGAACTTCATA+TGG 0.421045 1.2:-61916489 None:intergenic
CTCTACACCAATTAAATCAT+AGG 0.428333 1.2:-61915654 None:intergenic
TTCCACAAACTTAGCCAGCT+TGG 0.428764 1.2:-61913050 None:intergenic
ACCATTGAAGAAGATCTAAA+CGG 0.434766 1.2:+61910752 MS.gene005058:CDS
CCCCAAACTCAGAGTTTAAG+TGG 0.436616 1.2:-61919036 None:intergenic
CCCGTTTAGATCTTCTTCAA+TGG 0.437299 1.2:-61910753 None:intergenic
CAAAATTCAAATGCACTTTG+AGG 0.439404 1.2:+61919501 MS.gene005058:CDS
GAAACTGAAGTTTGTAGAAG+TGG 0.448325 1.2:+61913957 MS.gene005058:CDS
CCTAGATCAAATGCACTAGA+AGG 0.458119 1.2:-61910710 None:intergenic
CCAAACTGCTATGATGCTAT+AGG 0.459765 1.2:+61917393 MS.gene005058:CDS
TGATTTGCGCAAAGTGGAGT+TGG 0.463004 1.2:+61911886 MS.gene005058:CDS
TCAATATTTCCCTATGGCCT+CGG 0.467395 1.2:+61918888 MS.gene005058:CDS
AGCATTGGAGAAACTGCAAT+TGG 0.468009 1.2:+61915619 MS.gene005058:CDS
TGCTCATCCATGACACCAAA+AGG 0.473405 1.2:-61917354 None:intergenic
ATATGGATATTTAATAGAGC+TGG 0.474130 1.2:-61916472 None:intergenic
GGCAGGTCAATATTTCCCTA+TGG 0.475047 1.2:+61918882 MS.gene005058:intron
GTTTATCAGGACTCGATGTT+GGG 0.475291 1.2:-61920262 None:intergenic
CCGTGCTTACATACAAGCAT+TGG 0.475768 1.2:+61915604 MS.gene005058:CDS
GGTTTATCAGGACTCGATGT+TGG 0.478071 1.2:-61920263 None:intergenic
ATCCAAGCTGGCTAAGTTTG+TGG 0.479760 1.2:+61913048 MS.gene005058:CDS
AGTGATGATATATTGTTAGA+TGG 0.482400 1.2:+61910888 MS.gene005058:intron
CATTATTATCCCTCCGAGAA+TGG 0.482423 1.2:+61913075 MS.gene005058:CDS
CCTATGGCCTCGGTTTAAGA+TGG 0.482544 1.2:+61918898 MS.gene005058:CDS
TATATGTACCATTGTGTTTG+AGG 0.486517 1.2:-61910584 None:intergenic
GAGCAATACAGCATTATTTG+TGG 0.490021 1.2:+61919534 MS.gene005058:CDS
AACCTGAGCTTGAAAAGCTC+AGG 0.490108 1.2:+61914019 MS.gene005058:CDS
CCATTGAAGAAGATCTAAAC+GGG 0.498176 1.2:+61910753 MS.gene005058:CDS
ATGGTGGACATCCTTGTTGA+TGG 0.498798 1.2:+61913094 MS.gene005058:CDS
ACAAGGATGTCCACCATTCT+CGG 0.499451 1.2:-61913088 None:intergenic
AGCTCATTATGTCTCGGAGG+CGG 0.500639 1.2:+61917872 MS.gene005058:intron
TCGCATAATACACCAGCATC+AGG 0.502459 1.2:+61917431 MS.gene005058:CDS
CACAAAGCCAAAACTACAAA+CGG 0.504050 1.2:+61919212 MS.gene005058:CDS
CAGGAAGCAGGTCCTGAAGC+TGG 0.508420 1.2:+61919478 MS.gene005058:intron
CTTGATAAGTAAATCATCAA+TGG 0.510022 1.2:-61919175 None:intergenic
CAAGAGAAGTCTATGGATAT+GGG 0.510930 1.2:+61912693 MS.gene005058:CDS
AGTCTATGGATATGGGTTTG+AGG 0.513380 1.2:+61912700 MS.gene005058:CDS
ACAGCAGATCGATTCTTTAG+CGG 0.514662 1.2:-61915716 None:intergenic
TATTTCAGCTCATTATGTCT+CGG 0.517780 1.2:+61917866 MS.gene005058:intron
GGATAGGATTAATATATTGA+AGG 0.519305 1.2:+61915751 MS.gene005058:CDS
AAAACTTAGAGATTATACTA+AGG 0.519810 1.2:+61911853 MS.gene005058:CDS
GAATCTGGAACGACTTAGAA+TGG 0.521290 1.2:+61919152 MS.gene005058:CDS
GATTCCATCAAGAGGATCCC+TGG 0.522126 1.2:+61920458 MS.gene005058:CDS
GTTGCAAATATACTATCTAA+AGG 0.530234 1.2:+61911827 MS.gene005058:CDS
CATCTTAAACCGAGGCCATA+GGG 0.530347 1.2:-61918897 None:intergenic
TTGTTCAATGCAGACCCACC+AGG 0.531672 1.2:-61920476 None:intergenic
CGTATAGTAAAGTAGCAATT+GGG 0.531794 1.2:-61920426 None:intergenic
GAGCTGGCTTCAGCTATATG+AGG 0.536113 1.2:-61916456 None:intergenic
CCACTTAAACTCTGAGTTTG+GGG 0.538247 1.2:+61919036 MS.gene005058:CDS
CCATCTTAAACCGAGGCCAT+AGG 0.544335 1.2:-61918898 None:intergenic
CAGGCAGAAAGCAGTCTCAA+AGG 0.545719 1.2:+61914038 MS.gene005058:CDS
CATGCTTGATTCCAGGAAGC+AGG 0.549332 1.2:+61919466 MS.gene005058:intron
GACTCTCTGATTCCATCAAG+AGG 0.549335 1.2:+61920450 MS.gene005058:CDS
AAACTTAGAGATTATACTAA+GGG 0.553199 1.2:+61911854 MS.gene005058:CDS
TGAGAATGATTTGCGCAAAG+TGG 0.554547 1.2:+61911880 MS.gene005058:CDS
CTTGGATTCTTATTTAGACA+AGG 0.558627 1.2:+61917903 MS.gene005058:CDS
GGAAGTGGAGCCACTGGTGA+AGG 0.561875 1.2:+61920298 MS.gene005058:CDS
TAACGCCTCATGACATAATG+AGG 0.563593 1.2:-61918989 None:intergenic
GTATGTTGTTAACTTTCTCA+AGG 0.565046 1.2:+61914836 MS.gene005058:CDS
GTTAACTTTCTCAAGGAACA+TGG 0.568981 1.2:+61914843 MS.gene005058:CDS
TCTAAATAAGAATCCAAGCA+TGG 0.575363 1.2:-61917898 None:intergenic
TTAAACTCTGAGTTTGGGGA+TGG 0.578938 1.2:+61919040 MS.gene005058:CDS
CCAATGCTTGTATGTAAGCA+CGG 0.580622 1.2:-61915604 None:intergenic
TGATTTAATCAAGTTTGTCA+AGG 0.581810 1.2:+61920104 MS.gene005058:CDS
TGGTGGGTCTGCATTGAACA+AGG 0.583690 1.2:+61920478 MS.gene005058:CDS
GTCAGAATGTTACCTGATGC+TGG 0.583853 1.2:-61917443 None:intergenic
TGATAAACCTATAACTGTTG+CGG 0.590582 1.2:+61920277 MS.gene005058:CDS
CATATGGAAACTCTGCTAAG+TGG 0.592668 1.2:+61912182 MS.gene005058:CDS
GCTATATGAGGAATCAAAGC+CGG 0.605953 1.2:-61916444 None:intergenic
ATAGGTGGCTGAATCCAAGC+TGG 0.607893 1.2:+61913036 MS.gene005058:intron
TTCATCCTCATTATGTCATG+AGG 0.609555 1.2:+61918984 MS.gene005058:CDS
TGTTGCGGAAGTGGAGCCAC+TGG 0.613209 1.2:+61920292 MS.gene005058:CDS
ATGCAAATGTGAAGACATTG+TGG 0.614201 1.2:+61918951 MS.gene005058:CDS
TGGACTTCAACAGGAGCTTG+AGG 0.615166 1.2:+61910908 MS.gene005058:CDS
TTTGATCTAGGAGCATTCGT+TGG 0.622940 1.2:+61910722 MS.gene005058:CDS
TATTATCCCTCCGAGAATGG+TGG 0.631865 1.2:+61913078 MS.gene005058:CDS
TGCAAATGTGAAGACATTGT+GGG 0.634645 1.2:+61918952 MS.gene005058:CDS
TCGAATACCATCTTAAACCG+AGG 0.634683 1.2:-61918905 None:intergenic
GTTTGTAGAAGTGGACACAA+TGG 0.634918 1.2:+61913966 MS.gene005058:CDS
TTATGTCATGAGGCGTTATG+CGG 0.635931 1.2:+61918994 MS.gene005058:CDS
GGATGTCCACCATTCTCGGA+GGG 0.636579 1.2:-61913084 None:intergenic
TTTGAGGCTTAAGAATCGCA+AGG 0.639267 1.2:+61912716 MS.gene005058:CDS
TTCAGCTCATTATGTCTCGG+AGG 0.639985 1.2:+61917869 MS.gene005058:intron
CCATCAAGAGGATCCCTGGT+GGG 0.646372 1.2:+61920462 MS.gene005058:CDS
ATGAGATTAGGAAATATTCG+AGG 0.647688 1.2:+61920528 MS.gene005058:CDS
GGACATCCTTGTTGATGGAG+AGG 0.650934 1.2:+61913099 MS.gene005058:CDS
TCCATCAAGAGGATCCCTGG+TGG 0.661975 1.2:+61920461 MS.gene005058:CDS
CTTGCAAAATCCTTCACCAG+TGG 0.665825 1.2:-61920308 None:intergenic
TTATATTGATACAATGAACA+AGG 0.679968 1.2:+61914896 MS.gene005058:CDS
TGTTCAATGCAGACCCACCA+GGG 0.681342 1.2:-61920475 None:intergenic
ATAATACCTCTCCATCAACA+AGG 0.682669 1.2:-61913105 None:intergenic
TGATGTCGCCTCAAACACAA+TGG 0.699806 1.2:+61910576 MS.gene005058:CDS
AGGATGTCCACCATTCTCGG+AGG 0.702552 1.2:-61913085 None:intergenic
CTGCAGATATAATTTCTGTG+AGG 0.705047 1.2:+61916646 MS.gene005058:intron
GTAGAGACAAGAAGCAACAG+CGG 0.747225 1.2:+61915671 MS.gene005058:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.2 gene 61910571 61920559 61910571 ID=MS.gene005058
chr1.2 mRNA 61910571 61920559 61910571 ID=MS.gene005058.t1;Parent=MS.gene005058
chr1.2 exon 61910571 61910597 61910571 ID=MS.gene005058.t1.exon1;Parent=MS.gene005058.t1
chr1.2 CDS 61910571 61910597 61910571 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61910707 61910774 61910707 ID=MS.gene005058.t1.exon2;Parent=MS.gene005058.t1
chr1.2 CDS 61910707 61910774 61910707 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61910890 61910947 61910890 ID=MS.gene005058.t1.exon3;Parent=MS.gene005058.t1
chr1.2 CDS 61910890 61910947 61910890 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61911824 61911919 61911824 ID=MS.gene005058.t1.exon4;Parent=MS.gene005058.t1
chr1.2 CDS 61911824 61911919 61911824 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61912110 61912211 61912110 ID=MS.gene005058.t1.exon5;Parent=MS.gene005058.t1
chr1.2 CDS 61912110 61912211 61912110 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61912654 61912737 61912654 ID=MS.gene005058.t1.exon6;Parent=MS.gene005058.t1
chr1.2 CDS 61912654 61912737 61912654 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61913040 61913120 61913040 ID=MS.gene005058.t1.exon7;Parent=MS.gene005058.t1
chr1.2 CDS 61913040 61913120 61913040 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61913916 61914059 61913916 ID=MS.gene005058.t1.exon8;Parent=MS.gene005058.t1
chr1.2 CDS 61913916 61914059 61913916 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61914196 61914287 61914196 ID=MS.gene005058.t1.exon9;Parent=MS.gene005058.t1
chr1.2 CDS 61914196 61914287 61914196 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61914836 61914917 61914836 ID=MS.gene005058.t1.exon10;Parent=MS.gene005058.t1
chr1.2 CDS 61914836 61914917 61914836 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61915587 61915772 61915587 ID=MS.gene005058.t1.exon11;Parent=MS.gene005058.t1
chr1.2 CDS 61915587 61915772 61915587 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61916432 61916547 61916432 ID=MS.gene005058.t1.exon12;Parent=MS.gene005058.t1
chr1.2 CDS 61916432 61916547 61916432 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61916652 61916710 61916652 ID=MS.gene005058.t1.exon13;Parent=MS.gene005058.t1
chr1.2 CDS 61916652 61916710 61916652 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61917352 61917452 61917352 ID=MS.gene005058.t1.exon14;Parent=MS.gene005058.t1
chr1.2 CDS 61917352 61917452 61917352 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61917874 61917924 61917874 ID=MS.gene005058.t1.exon15;Parent=MS.gene005058.t1
chr1.2 CDS 61917874 61917924 61917874 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61918887 61919066 61918887 ID=MS.gene005058.t1.exon16;Parent=MS.gene005058.t1
chr1.2 CDS 61918887 61919066 61918887 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61919144 61919278 61919144 ID=MS.gene005058.t1.exon17;Parent=MS.gene005058.t1
chr1.2 CDS 61919144 61919278 61919144 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61919481 61919555 61919481 ID=MS.gene005058.t1.exon18;Parent=MS.gene005058.t1
chr1.2 CDS 61919481 61919555 61919481 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61920078 61920135 61920078 ID=MS.gene005058.t1.exon19;Parent=MS.gene005058.t1
chr1.2 CDS 61920078 61920135 61920078 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
chr1.2 exon 61920255 61920559 61920255 ID=MS.gene005058.t1.exon20;Parent=MS.gene005058.t1
chr1.2 CDS 61920255 61920559 61920255 ID=cds.MS.gene005058.t1;Parent=MS.gene005058.t1
Gene Sequence

>MS.gene005058

ATGGCTGATGTCGCCTCAAACACAATGGTACATATATCATACCATAACCGTTTTCTGTTACACTGAAATTGCTACTATCATCGACAAATTGCTGAATTCGCATTTCGAATTTCATTGAATATTTGTTTGTGTACAGAGTCCTTCTAGTGCATTTGATCTAGGAGCATTCGTTGGTGATTTAACCATTGAAGAAGATCTAAACGGGTTAATATACTCTCTTCTATTATTGCAGTTCCAAATTACAATCTGTTTTAGTTAATTGTTATCTATGCGATGAAGAATGTTAATTTTAGATGTTTTGCTTAAATTAATTTTGCAGTGATGATATATTGTTAGATGGACTTCAACAGGAGCTTGAGGAATGTAAGAATGATGAAGTGAGTTATTTAACTCAACTTAGTTCTTGTGTTGTAACACTGCTATTTTAGATTCTGATGAAATTGCATAGTTGATCTCAGCATAATGTTTTATATCAATATTTTCGGTTGTAGCTTTGTAAGGTTCCGATGTCTCTTACGAGTTGTGCGCGATTCTTAAGAAAAGGATTAGTTGTGTTGATTTCAACGGTAGAATGAGTTTTATTTACTAAAACTTCCTTATTAGTTGTAGTTAATAGAGAAGTTATGTGAGTTGAAATACAATGAATAAGAGTATATTAGTGGAAACAAATAATCAATGTTTCATTGGTATTAACCTGGTGGTGTTGGCTTGGGACCTTGGAGTGTGCTCCTACTCAAGGTGGCAGTTTAGCTTCTTCAAAAAAAAAAAAAAAATTCATTGGTATTCTGAAGTGGCAATTAACTTGGAGATAGAGAAATATTGCAAATGAGACACTTATAATGAGATGAGGGAGTACCTATTTACCAAAATGATTATTAACCGCGTATATGAGAACAATTCGATATAATCCAATAATCAATAGGAGACCTTGCTTGTCGGTTTTGTTTCTCAATTGAAGAGTTTGGTGTACTGGGCAACGATTTCAATACAAGTTATAAACACTCAAAATAATTCTTCAATTGGAGGCAATTGCACCAATTAATTTCACTTTAAGCATGTTTACTTTTTTTATATTCTTCTGATTGGCTTCATTTAAGGTTACATTTTATGAACAATTGTATGTTCTTTATGTGCATAGTCAAAGGTCACAAATCACATTCTCCATCTTTTTGTTGTCCCTGCCTTTCAATTATACTTCTAGCTAGAAATACACCACACATATGTAAGTTATTAAGTTGTTGTTCTCTGTGTAGGTTGTTGCAAATATACTATCTAAAGGTCCAAAACTTAGAGATTATACTAAGGGAGTTGAGAATGATTTGCGCAAAGTGGAGTTGGATTCAATTCAGGTTTGTTTATAATATTGTGAGCATTAAATAGCCACGCCATTTTGTTTCTTCTTTGCTAGATTTGATGACTAGTAAGCTTTTGTCTTTACTGTCTGCTTGTAGCGATGATCTTACATGTAGGCTTGCTTTTGTCGATCGTTGCTGACAATATGCTAATCAACTGATTTTACAACTCTGCCATTTATTGCAGGATTATATTAAAGAGAGTGATAATCTAGTCTCTCTTCATGACCAAATTCATGATTGTGATAATATCTTGTCACATATGGAAACTCTGCTAAGTGGATTTCAGGTATGTTGGTCTTTTGAGCAAATTGAAAAAGATTGCATTTATGAGCATCTGTACCGATCAAAAGCAGAACCACCCAACCAGTTCTTAGTTAGTCAATAATATCCTTTAAAAATGGTGGTAAATGTGTTTTCCTGATTTTCGGACAAGACAGATAATGAAAGTATTTTACATTTGGAGTGGCACCACAATCTCGACAATTTTTGTTTATTCTAAAGCTTGAATGTGACATTTCTGCTTTGTTTAGCTTTTAGAAGTATTATTTTCCCCTTGCAACAATGAAGTGTCTATTTACCACCTTTGAGGATCTGTTAGTATATGTCAAACAAATGCTACAATTATAGTTGTTTATTCGATCATTTGAAGGACTTCTCAAGCTATTTGAATTTCAGTTTCTATGTTGATTTTGAATATTAAATCACGAAATTTTAATTTTATTTACCAGGCTGAGATTGGTTCCATAAGTTCAGACATTAAAATTCTGCAAGAGAAGTCTATGGATATGGGTTTGAGGCTTAAGAATCGCAAGGTATTGCCATTTTATATAAACGATCTAAGAGTTCAAAGACATTCATAATTGTAGCACCTTTTGGCGTAATATTAATTGATTATCAGTTTGTTCTGGAAATCAAATTGCATCAAAAGGCTGTTTACATTTTGACAATTAGCTTAGTTCATTAATATTTCTTTAATGGTTGGACTTCTATTCATGTTTGGATGAGGGGTATATTAGTTTCCCCTGCTACCCAGCGAATTAAGTTTTTCTGTCTTTTGCCTGCATGTGTTATATGTAGTATGTAGTATAATTGGTCTTGTTTTTTCTCTCAATAGGTGGCTGAATCCAAGCTGGCTAAGTTTGTGGAAGACATTATTATCCCTCCGAGAATGGTGGACATCCTTGTTGATGGAGAGGTATTATGCTTTCTCTGTAATCTACTTCTATCCTCTCCAATAATGTTTTATTAATTTCTTTTTGTGGTAATGTGCAAAGCACATTTAATATTTCTAGTATTTGTTGAGATTTGAGAGTTCGGCATTGACTAGAGATAGGGCCTAGGTAGTACTTATAAGGTTTGGTCAATCTTCACCTTATAAGTCAGTTTTGTGGGTTGAGCTAGTCCCTAAGTCCTGAATTTAAGGTATTGTTTGCTTCTTATTTTCTACATTTTTGCCAGCTGTCCAGGCTTTGAAACAAGGGTCTGATCTGGTATCTCTAATATATATTTTCTAATACTTTGGTTTTTTAACTAATATTTGAAAATAGACATACATAACAAATATTGCAGTGCCGGTGTTGAGAAGGTCTGCAGCCTGCACACAACATTATAAACACTGGTCATTTATTATCTAAGATCATGGCATTTGTAAACTAGTGTCTTGGCTTGGGTCCTTAGAGAATCAACTAAAAGGAGTCTAGCTCTTCTGGTTTTGATCATGTTTTTTTCAGAAGTCTCTTGTTTGATTTTGTTTAGGCATAATAATAGTATGGTACTTAGATTGACAGTTTTATTGTTGCTGGTTTGATGTCTCTTCTTGGTCTTCTTTGGCATTTTAGGCTACAGTTGACATGCTTTTACATCGAGGTGTACTTTTCATACTTCATGTGCACCACCCAATACTTGACATGCATGCTGCTCTGCATTACTTCTCTCCTACTAGTATATTCCCTTCTAGTTAGATTTCTTTCTCACTTTGGATGCTTTTCAGGTCAATGAGGAATACATGAGAACTCTTGAGATTCTAAGTAAGAAACTGAAGTTTGTAGAAGTGGACACAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCTGAGCTTGAAAAGCTCAGGCAGAAAGCAGTCTCAAAGGTTGTCTACATCAATAACAGTATTAGTATGGAATTTTGTTTTCGTTTATAATTTAATGCAGAAATTTTCTTTTATTCTGGGAGCTGTTTATCAAAGAAACAAATATCCATATCATCTGTTATCCATCCATCTGCAGGTATTTGACTTCATTGTTCAGAAACTATATGCATTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTGAGTTTCTTAATTAATTTTTAGAATGCTATAGCTTGATGGATTGATATGCTATGAATTCTGAATTCCTATTGATAAGGTTCCTCTAGCAATTAGTTTTATCTACTAGACAACATGCCCATGTTTGCTGGTGTTGAGTTTTTTCAATATACATTTTTATAAATGTATTTCTCTTGAGTATTAAATTGTTTCATGCACAAATCTATTCATTGCTATTTTGACTGGATATTACTTTTTAAATATATTTTTAACAACATTGTATTGAGCCTTGAATGTACAATTTTATCTAAATCATCACAAATTGTGCTTATATACAGATCGATCTGTAGAATTTTGTTATTGAACTACTATTGAAGGATTTCTTATTTTAAATGTTTTATTTGTCATCATTTGCATTTGAGCTGCTAACAAGAGAACTAGTGAAGGATCTGACATGCACCATTGTATACCTCCTTGCGTTAACCACCTTTAAATTGTGAAAACGTTTTCGTTATTTTTGTAACTTTGGGTGCTTTATGAATCTAACAAATAGAAATGTAAAAGTGTAGGTATGTTGTTAACTTTCTCAAGGAACATGGCAAAGAAGTATATAATGAAGTTCGTGCAGCTTATATTGATACAATGAACAAGGTAAATGCTAAAAATCAGAATTTTCCATTAATATTTTTATTGATCAAAATGTTATCCTAAATAATGCTATGAGGATGGAAAATGTTTGTTTGTGTTCACATTTTGTTTAAATTTCTTGCTCGAAAGCATCTTTCTAGAAAATAAACTTCACATTAGCATCTCAGCCCATATGCCAGCAAAGTTGTTTTCAAAAAAAATATACGTTTACAATTTCAAAGAAGCTTAAGCTTACTATAAAAGACTTGGAGCCTGTTGACAAAAAGCTAGTTTTATATGATTATGTATTCAATCAAAGTGTAGGTTCAATATAGAAAAAATCCCCCACTAAAAATGCATTTCCCCCGAAGTGAAGTTTATAGCGAGGTGTGAATGGTAGCATTTTAAAATCTTTGGTAGCTTTGAGTTGGCCTGACTTACTTTCATTCTATGTTAATTTGCTGGCTTTCACGGTTAATGATGAACCACATGGAAGACTTCTATTTTCGTTGTAATATGTATGAGCTGAGTGGGCTGGGCCAATCACTGATCCATGTTACAATTATCAATTTTTAGCAACTATTCCAATATTTAGACATATAGATATTGAGTGAAATGGGTATAATGATTTTGCAGGGAAATGAATTTGAAAATTATTTGATGAAGTATCCTTATGCTCCTCTATATGTGCAGGTTCTTAGTGCTCATTTCCGTGCTTACATACAAGCATTGGAGAAACTGCAATTGGATATAGCAACATCCTATGATTTAATTGGTGTAGAGACAAGAAGCAACAGCGGTCTTTTTGCAACAGCATGGCAACCGCTAAAGAATCGATCTGCTGTTTTTGCTCTTGGGGATAGGATTAATATATTGAAGGTATGACTCAACCTAGGAAAAAGGGAAAAACTATGCATATTATCCTTTTGTTTTATAATACTATCTGAATTGACCGAGGAGTCCATGTATTTCTTTCCATTGGTGTCAGTAGTTCATTTTGAGCAGTGAAGGTTAGTCAAGACTAGGATAATAATTGTGTGATGAGAAAGAAAACTTTTTTTTTCAGCAGAATTATATTTCCTGCCCCTAGGGATCTGTTGCTGGTTTAAAAATTTATTTTATTTATGATACTTTGAATTATTTGCTTTAGGAAATAATTGAAATTTCTTAGAGAGCCTTTGCTATATACTTTTTATTTGTGAAAGTTATATTTTGTGGTCCTTGGTATTGTTAATGTGACTGGATTTGACTCCTCTAAAGAAAGAGATGCCCTTTAGAGGATAAAAGTTTAAATTATAAACGATGATTGATAGGTTAACAATTAAGATATCAACAATTTCATAATTTATTATATATGTGTATGTATTTTATATTTTATCACAATTTCAACTGTTGATTCTTCAATGGAAGGTTATTTTTACACTCTTTACTTGCGAGGAGCCAAACTCAATCAAAATTTATACAATCATGAGATGACTCTGATCTGCAGAGATTGTGTAGTCATTGGGTTATGGCCTTAAGATTTGACATTATTTCAGGAAATTGATGAACCGGCTTTGATTCCTCATATAGCTGAAGCCAGCTCTATTAAATATCCATATGAAGTTCTGTTCAGGAGCTTGCAGAAGCTGCTTATGGATACTGCTACTTCAGAGTACACTCCAGCTTGCTATGGCACTTAATATTGTCTTACAAAATCCTTCTGTGCATAAAAACCCTAGTTAAATACATGTTGACATTATTTCCTTGCATCTGCAGATATAATTTCTGTGAGGATTTTTATGGGGAACAACATATGTTCTATGAAATTTTTTCAGGTATTGTGATGGAGTTTTTAAATTTTGTGAAGTGTTTGCAGTCATTGTCCAATAGATTAAAGAATTTCTTTAGCTTATTGATATTTAAAATGAACTTTGTTAGATTCGGTTTTACATTGCTACTCTGTAGATTGCAAAATTTAAACTATGCCAACATGGGAACAAAAAATGGTAGAGTTGATTTGTTATAGATCATAGCTTATGTATGAAATTTGTAATTTTTGCACATATTTTGTTTTATTGCTGAACTAAATAAACGTTAGCATTTAATATAATCAATAATGGCATGGTAACAAAAGCCATTTTCAGCAATTTTTTATTGGGAAATGCTAATGAGTTCCCTAAGGGCACTCTTTAAGAGTTTGAAGTAGTGAGTTTTTATGAAAATATGCGTATTCAGTGCATTGGAAATTGAAATGTTTAACTTTTTAAATAAATGCATTGGAATAACTTATTTAGTATCCTTAAAGAGTGCCCTTAAGTGCCCTAAGGGCACTCGTTAGCAAGACCCTTTTTTATTTTTGTACCTTTTTGGTATATAAACAAACACCACTGTATCATTTTGTCTTTAAGTTTTTCATTTTCAGATATGGGTTCAGGTTTTGTATAGGTCAATTGATATGCCTTTTTGGTTTATACAGGTCCTTTTGGTGTCATGGATGAGCATTTCAGTACAATACTTCCAAACTGCTATGATGCTATAGGTCTAATGCTTATGATTCGCATAATACACCAGCATCAGGTAACATTCTGACTTGTAAGAGTGGTTTCAGTCTTCAGTAAGAAGGACAACATATCTAAGTAAACCACATTGATGCTATTGCGGCCTAAAGAAGGTGTAATGCAAACAAGTGTTTTTCAACAATCCCATCATCTTGTTCCAAGAATTTGATTCATAGCCACCCTCTTGAAATTCCAATGAAAACTGACCCGTTGGTTTTGGGATACAAACCATTTCTTGAGAAGCAATTACCAAATAATTGAATAATATAACACAAAACAGATTTCATTGCACAATTAGAATTTAAATAAGTTCCAATCTGCATTTTATGTTTCAGTTAAAGTTAAAACCAAACAGTAATGTGAATGTTGGCAAAGATTTGTGCATTTACAAATGTTTTACCTTTCAAACAATTTGAAACTGATATACTTACTTATTTCAGCTCATTATGTCTCGGAGGCGGATTCCATGCTTGGATTCTTATTTAGACAAGGTCAGCTTCCTGGGCAATGCGTTCTGCTTAAACAAGATTAGTTTTTCTTGACAGTGTGTTTATTGCTGGTAGATTCTGATATTATACTCAAATGAGCATAATTCATCTAGTCACAAGTAGCCCTACAATTCTTGTAGGGTTCTGAGTCTAGACAGTTATAACATTGAAATTTCTGGGGTATCGGTTAGAGAACTATTTGACTGCTTAGCTGGAACTAAAATCGATTTGAAATAATTGAATAATCTGAATGATTGTCTATATCATACAAAGAATCTGTACAACCAACATACATGGGAAACATAGTTAGAATCCTCAAGATTGGGAGCAGCTAGCAGATAATAAGTGATGTCTCGACCCTGCAACCAGCTAGGAGCTAGGTGAAGAAAGAATAGATTTTAGCACTTCATCACCATGAACTAGTGAATAAGCATCTGCTACTCGGTTCTCTTCATGATTAGCTCCGTATAGCTGCAGGACCCCAAAAATATCTCCTCATTTTGGTCATCAAATTCTGAAGCCGTTCCCTCTCCTTCCTCATTACGGGTTTCATTTTTCACCCAATATGACTAACCTCAACTTTTTATGAGAACATTGGCGAGGGGATTAATTTTTTCTTCACACTTAAAACATTGCCCTCGAGTCCTTCTTGCCATCAACACCTGACATGTTAAATGTCTAGTCCATTTTTGCTCCATGGAAATTCAACGTTTTCCCTCCGTTCTACCTATAGAAGTCATAGATGACTAGGCTCTTACATTTCCTAGACAAGACTTTCTAGATGGCGGGACTCTCTTGGCCTGGGTGTCTGAAGTTTTGTCATATACACTCTCAATTCTCTTACATTTCCCTTGGTCTAATATATTTTATTTACTGTGATATATGAAATCCTTCTATTGTTCAATGACGAAAATGGATAAAACTAGCCTTGAGTCATATTTAAAGCTAATTCATAACTTTGGCAGGTCAATATTTCCCTATGGCCTCGGTTTAAGATGGTATTCGACATGCACCTGAACAGTTTGCGAAATGCAAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCATTATGTCATGAGGCGTTATGCGGAGTTTACTGCTTCACTTATCCACTTAAACTCTGAGTTTGGGGATGGTCAGGTCAGTATAATAAACCTATCAATCATCCACTCCTTTTTGTAAATTTCTAATGCAATCCATCTGTTTACTAATTGCAGCTTGAACTGAATCTGGAACGACTTAGAATGGCCATTGATGATTTACTTATCAAGCTTGCCAAGAACTTCACAAAGCCAAAACTACAAACGGTGTTTCTTATAAACAATTATGATATGACAATCGCTGTTTTGAAGGTAAGAATCTGCAAGCTGGCTCTTTATTTTTATTTTTATTTTTATTTTGTAGAGCTATATATCTGCACCTAGAAAGTACTTGAACAAAACTCCATTTCAAATTGCTGGTGTGGTTCATGTCAAAATTGATTATCATAGCTTGCTCTATCAATTTTGGAATATCCAGGGTAACTTCAATTTTTGCTCGCATGCTTGATTCCAGGAAGCAGGTCCTGAAGCTGGCAAAATTCAAATGCACTTTGAGGAACTACTGAAGAGCAATACAGCATTATTTGTGGTAATTGCTTTCAATCCTTTCATACCTGGTTTTGTTGCAAATTAAAGTTCGTGTTTAATGGTGCATGCAAAGAGTATACGAGAACAAATTTTTTCAGTTGCTATTTCTTCACATTGTTGGTTAAGAAAAAGTGAAAAATGTTGCCACTTAGTCGAAATTTAGTTTCTGTTGCCAATTTGCGTTGTGATTGTCATTTAAGACTGAAACTCTTTTTCGGAAATTTTAGTGCTGTCGGTCCTGATCTGAAGGAAATGAATTAGAAATAAGACTAGCTGGCTTAGAGTTCTGTGTTAAATTAAGTGGGGGAGAACTCAAGATACCACTTGCTGATAACAAACTATTCAGAACTATGATCTCCATCTAAAGGAAACAAGTGAATGTGAACTTATGTAATTTTCAAAAAGAAGATGGGTCAGTGTATTCATTGATTATTTAGTGGTGTAACAGACAACTAATTGACTCTCTTGCTCTCATTTGCAATTGCAAAAGTCTTTACTTTTATTTTTCTTTCAATCCTTGCAGGAAGAACTTCTCCAAGAGCATTTTAATGATTTAATCAAGTTTGTCAAGGCCAAAGCCTGTAAGTATAAAGCGATGACACCACTTGTTAAAAAAAAAAAAAACGACAACACCAATGTCGCATCTTATTTACATTCAATATTTGCTAAACTATGGGCTTGATTGCATGAAATTTATCAGCTGAGGACCCAACATCGAGTCCTGATAAACCTATAACTGTTGCGGAAGTGGAGCCACTGGTGAAGGATTTTGCAAGTAGGTGGAAGGCGGCAATAGAGTTGATGCACAAAGATGTCATCACATCTTTCAGCAATTTTTTGTGCGGTATGGAGATCTTAAGAGCTGCATTGACCCAATTGCTACTTTACTATACGAGACTCTCTGATTCCATCAAGAGGATCCCTGGTGGGTCTGCATTGAACAAGGATCTTGTTTCCATATCTTCAATCATGTATGAGATTAGGAAATATTCGAGGACTTTCTAA

Protein sequence

>MS.gene005058.t1

MADVASNTMSPSSAFDLGAFVGDLTIEEDLNGDDILLDGLQQELEECKNDEVVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMETLLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALGDRINILKEIDEPALIPHIAEASSIKYPYEVLFRSLQKLLMDTATSEYNFCEDFYGEQHMFYEIFSGPFGVMDEHFSTILPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLIHLNSEFGDGQLELNLERLRMAIDDLLIKLAKNFTKPKLQTVFLINNYDMTIAVLKEAGPEAGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEIRKYSRTF