Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07608.t1 | XP_003590925.1 | 99.4 | 699 | 4 | 0 | 1 | 699 | 1 | 699 | 0.00E+00 | 1352 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07608.t1 | Q94KD3 | 83.2 | 685 | 114 | 1 | 15 | 699 | 24 | 707 | 0.0e+00 | 1135.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07608.t1 | G7I669 | 99.4 | 699 | 4 | 0 | 1 | 699 | 1 | 699 | 0.0e+00 | 1352.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene07608 | 0.822075 | 2.88E-53 | -1.69E-46 |
| MS.gene049166 | MS.gene07608 | 0.831535 | 1.58E-55 | -1.69E-46 |
| MS.gene049178 | MS.gene07608 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene049208 | MS.gene07608 | 0.835782 | 1.37E-56 | -1.69E-46 |
| MS.gene049786 | MS.gene07608 | 0.813199 | 2.89E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene07608 | 0.835308 | 1.81E-56 | -1.69E-46 |
| MS.gene050085 | MS.gene07608 | 0.803421 | 3.51E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene07608 | 0.85985 | 3.11E-63 | -1.69E-46 |
| MS.gene050317 | MS.gene07608 | 0.849375 | 3.37E-60 | -1.69E-46 |
| MS.gene050439 | MS.gene07608 | 0.82973 | 4.37E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene07608 | 0.868417 | 6.63E-66 | -1.69E-46 |
| MS.gene051003 | MS.gene07608 | 0.826366 | 2.82E-54 | -1.69E-46 |
| MS.gene051063 | MS.gene07608 | 0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene07608 | 0.808626 | 2.82E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene07608 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene07608 | 0.816267 | 6.04E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene07608 | 0.809772 | 1.60E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene07608 | 0.828741 | 7.59E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene07608 | 0.83039 | 3.02E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene07608 | 0.837087 | 6.39E-57 | -1.69E-46 |
| MS.gene051756 | MS.gene07608 | 0.838577 | 2.65E-57 | -1.69E-46 |
| MS.gene051757 | MS.gene07608 | 0.813611 | 2.34E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene07608 | 0.822826 | 1.92E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene07608 | 0.820158 | 7.95E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene07608 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene07608 | 0.83233 | 1.01E-55 | -1.69E-46 |
| MS.gene052335 | MS.gene07608 | 0.809534 | 1.80E-50 | -1.69E-46 |
| MS.gene052370 | MS.gene07608 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene052434 | MS.gene07608 | 0.839359 | 1.66E-57 | -1.69E-46 |
| MS.gene052527 | MS.gene07608 | 0.801555 | 8.52E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene07608 | 0.830607 | 2.67E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene07608 | 0.816327 | 5.86E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene07608 | 0.804299 | 2.31E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene07608 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene053381 | MS.gene07608 | 0.837932 | 3.88E-57 | -1.69E-46 |
| MS.gene053677 | MS.gene07608 | 0.819371 | 1.20E-52 | -1.69E-46 |
| MS.gene05380 | MS.gene07608 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene07608 | 0.824902 | 6.28E-54 | -1.69E-46 |
| MS.gene05469 | MS.gene07608 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene07608 | 0.829282 | 5.62E-55 | -1.69E-46 |
| MS.gene055313 | MS.gene07608 | 0.829833 | 4.13E-55 | -1.69E-46 |
| MS.gene055314 | MS.gene07608 | 0.831987 | 1.22E-55 | -1.69E-46 |
| MS.gene055424 | MS.gene07608 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene07608 | 0.82091 | 5.34E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene07608 | 0.852237 | 5.26E-61 | -1.69E-46 |
| MS.gene056181 | MS.gene07608 | 0.847915 | 8.55E-60 | -1.69E-46 |
| MS.gene056403 | MS.gene07608 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene056432 | MS.gene07608 | 0.82495 | 6.11E-54 | -1.69E-46 |
| MS.gene056638 | MS.gene07608 | 0.813819 | 2.11E-51 | -1.69E-46 |
| MS.gene056752 | MS.gene07608 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene056764 | MS.gene07608 | 0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene07608 | 0.847902 | 8.62E-60 | -1.69E-46 |
| MS.gene056901 | MS.gene07608 | 0.801711 | 7.91E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene07608 | 0.826569 | 2.52E-54 | -1.69E-46 |
| MS.gene057057 | MS.gene07608 | 0.81208 | 5.07E-51 | -1.69E-46 |
| MS.gene057094 | MS.gene07608 | 0.86221 | 5.95E-64 | -1.69E-46 |
| MS.gene057102 | MS.gene07608 | 0.813148 | 2.96E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene07608 | 0.802167 | 6.38E-49 | -1.69E-46 |
| MS.gene057234 | MS.gene07608 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene057360 | MS.gene07608 | 0.851433 | 8.90E-61 | -1.69E-46 |
| MS.gene057999 | MS.gene07608 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene058055 | MS.gene07608 | 0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene058074 | MS.gene07608 | 0.811922 | 5.50E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene07608 | 0.824588 | 7.44E-54 | -1.69E-46 |
| MS.gene058638 | MS.gene07608 | 0.833491 | 5.17E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene07608 | 0.850247 | 1.92E-60 | -1.69E-46 |
| MS.gene058654 | MS.gene07608 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene07608 | 0.839077 | 1.97E-57 | -1.69E-46 |
| MS.gene05880 | MS.gene07608 | 0.813121 | 3.01E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene07608 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene07608 | 0.810745 | 9.90E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene07608 | 0.820992 | 5.12E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene07608 | 0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene07608 | 0.860752 | 1.66E-63 | -1.69E-46 |
| MS.gene059227 | MS.gene07608 | 0.827821 | 1.27E-54 | -1.69E-46 |
| MS.gene059719 | MS.gene07608 | 0.811843 | 5.71E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene07608 | 0.80979 | 1.59E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene07608 | 0.813576 | 2.39E-51 | -1.69E-46 |
| MS.gene06010 | MS.gene07608 | 0.809517 | 1.82E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene07608 | 0.837146 | 6.17E-57 | -1.69E-46 |
| MS.gene060191 | MS.gene07608 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene07608 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene07608 | 0.834114 | 3.61E-56 | -1.69E-46 |
| MS.gene060869 | MS.gene07608 | 0.807399 | 5.15E-50 | -1.69E-46 |
| MS.gene060870 | MS.gene07608 | 0.800217 | 1.60E-48 | -1.69E-46 |
| MS.gene061055 | MS.gene07608 | 0.802821 | 4.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005058 | MS.gene07608 | PPI |
| MS.gene74900 | MS.gene07608 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07608.t1 | MTR_1g079770 | 99.428 | 699 | 4 | 0 | 1 | 699 | 1 | 699 | 0.0 | 1431 |
| MS.gene07608.t1 | MTR_1g079770 | 99.309 | 579 | 4 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07608.t1 | AT1G71270 | 83.090 | 686 | 115 | 1 | 14 | 699 | 23 | 707 | 0.0 | 1196 |
| MS.gene07608.t1 | AT1G71300 | 77.536 | 690 | 148 | 2 | 16 | 699 | 13 | 701 | 0.0 | 1120 |
| MS.gene07608.t1 | AT1G71300 | 73.234 | 736 | 144 | 5 | 16 | 699 | 13 | 747 | 0.0 | 1102 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACACTTTGTTGAAGTATT+TGG | 0.142382 | 1.3:-56486498 | None:intergenic |
| AAACTCACTTGTACTTTAAA+AGG | 0.194550 | 1.3:-56486519 | None:intergenic |
| GCAACATCCTATGATTTAAT+TGG | 0.226169 | 1.3:+56487892 | MS.gene07608:CDS |
| AAGTATTTGGATATTTGTTT+TGG | 0.230134 | 1.3:-56486485 | None:intergenic |
| TTCATTGTTCAGAAACTATA+TGG | 0.235200 | 1.3:+56486451 | MS.gene07608:CDS |
| AGAAACACCGTTTGTAGTTT+TGG | 0.244653 | 1.3:-56491465 | None:intergenic |
| AACTCTGCTAAGTGGATTTC+AGG | 0.248051 | 1.3:+56484435 | MS.gene07608:CDS |
| ATCCACTTAAACTCTGAGTT+TGG | 0.250844 | 1.3:+56491280 | MS.gene07608:CDS |
| TATTATCACAATCATGAATT+TGG | 0.261483 | 1.3:-56484396 | None:intergenic |
| CTCATACATGATTGAAGATA+TGG | 0.264600 | 1.3:-56492751 | None:intergenic |
| GCAAGAGAAGTCTATGGATA+TGG | 0.265601 | 1.3:+56484937 | MS.gene07608:CDS |
| GCAACAGTTATAGGTTTATC+AGG | 0.284406 | 1.3:-56492516 | None:intergenic |
| CGCTTTATACTTACAGGCTT+TGG | 0.287857 | 1.3:-56492367 | None:intergenic |
| TCCACTTCCGCAACAGTTAT+AGG | 0.293677 | 1.3:-56492525 | None:intergenic |
| TTAGTATAATCTCTAAGTTT+TGG | 0.301178 | 1.3:-56484096 | None:intergenic |
| TCCACTTAAACTCTGAGTTT+GGG | 0.308316 | 1.3:+56491281 | MS.gene07608:CDS |
| AGTGGAGTTGGATTCAATTC+AGG | 0.310032 | 1.3:+56484143 | MS.gene07608:CDS |
| TTGGTTTATACAGGTCCTTT+TGG | 0.364770 | 1.3:+56489584 | MS.gene07608:intron |
| GAGCTTGCAGAAGCTGCTTA+TGG | 0.365008 | 1.3:+56488754 | MS.gene07608:CDS |
| CCTTCTAGTGCATTTGATCT+AGG | 0.372542 | 1.3:+56482942 | MS.gene07608:CDS |
| ATTGCAGCTTGAACTGAATC+TGG | 0.380544 | 1.3:+56491383 | MS.gene07608:intron |
| TTAAATCATTAAAATGCTCT+TGG | 0.392587 | 1.3:-56492329 | None:intergenic |
| TGATAATATCTTGTCACATA+TGG | 0.393000 | 1.3:+56484411 | MS.gene07608:CDS |
| CTCTGAGTTTGGGGATGGTC+AGG | 0.393038 | 1.3:+56491291 | MS.gene07608:CDS |
| ACCTATAACTGTTGCGGAAG+TGG | 0.396596 | 1.3:+56492524 | MS.gene07608:CDS |
| CTTCAATCATGTATGAGATT+AGG | 0.397107 | 1.3:+56492757 | MS.gene07608:CDS |
| TCGGAGGCGGATTCCATGCT+TGG | 0.397429 | 1.3:+56490131 | MS.gene07608:CDS |
| CCCACCAGGGATCCTCTTGA+TGG | 0.398438 | 1.3:-56492703 | None:intergenic |
| ATTTCAGGAAATTGATGAAC+CGG | 0.399043 | 1.3:+56488670 | MS.gene07608:intron |
| ATCCATATGAAGTTCTGTTC+AGG | 0.405654 | 1.3:+56488732 | MS.gene07608:CDS |
| TTTATTTACCAGGCTGAGAT+TGG | 0.409163 | 1.3:+56484887 | MS.gene07608:intron |
| AATTCTGCAAGAGAAGTCTA+TGG | 0.414810 | 1.3:+56484931 | MS.gene07608:CDS |
| TCGTATAGTAAAGTAGCAAT+TGG | 0.417834 | 1.3:-56492668 | None:intergenic |
| ATCGTTAGATGGACTTCAAC+AGG | 0.417942 | 1.3:+56483131 | MS.gene07608:CDS |
| CCTATAGCATCATAGCAGTT+TGG | 0.418595 | 1.3:-56489638 | None:intergenic |
| CTCCTGAACAGAACTTCATA+TGG | 0.421045 | 1.3:-56488734 | None:intergenic |
| CTCTACACCAATTAAATCAT+AGG | 0.428333 | 1.3:-56487899 | None:intergenic |
| TTCCACAAACTTAGCCAGCT+TGG | 0.428764 | 1.3:-56485296 | None:intergenic |
| ACCATTGAAGAAGATCTAAA+CGG | 0.434766 | 1.3:+56482984 | MS.gene07608:CDS |
| CCCCAAACTCAGAGTTTAAG+TGG | 0.436616 | 1.3:-56491282 | None:intergenic |
| CCCGTTTAGATCTTCTTCAA+TGG | 0.437299 | 1.3:-56482985 | None:intergenic |
| CAAAATTCAAATGCACTTTG+AGG | 0.439404 | 1.3:+56491741 | MS.gene07608:CDS |
| GAAACTGAAGTTTGTAGAAG+TGG | 0.448325 | 1.3:+56486203 | MS.gene07608:CDS |
| CCTAGATCAAATGCACTAGA+AGG | 0.458119 | 1.3:-56482942 | None:intergenic |
| CCAAACTGCTATGATGCTAT+AGG | 0.459765 | 1.3:+56489638 | MS.gene07608:CDS |
| TGATTTGCGCAAAGTGGAGT+TGG | 0.463004 | 1.3:+56484131 | MS.gene07608:CDS |
| TCAATATTTCCCTATGGCCT+CGG | 0.467395 | 1.3:+56491134 | MS.gene07608:CDS |
| AGCATTGGAGAAACTGCAAT+TGG | 0.468009 | 1.3:+56487864 | MS.gene07608:CDS |
| TGCTCATCCATGACACCAAA+AGG | 0.473405 | 1.3:-56489599 | None:intergenic |
| ATATGGATATTTAATAGAGC+TGG | 0.474130 | 1.3:-56488717 | None:intergenic |
| GGCAGGTCAATATTTCCCTA+TGG | 0.475047 | 1.3:+56491128 | MS.gene07608:intron |
| GTTTATCAGGACTCGATGTT+GGG | 0.475291 | 1.3:-56492503 | None:intergenic |
| CCGTGCTTACATACAAGCAT+TGG | 0.475768 | 1.3:+56487849 | MS.gene07608:CDS |
| GGTTTATCAGGACTCGATGT+TGG | 0.478071 | 1.3:-56492504 | None:intergenic |
| ATCCAAGCTGGCTAAGTTTG+TGG | 0.479760 | 1.3:+56485294 | MS.gene07608:CDS |
| CATTATTATCCCTCCGAGAA+TGG | 0.482423 | 1.3:+56485321 | MS.gene07608:CDS |
| CCTATGGCCTCGGTTTAAGA+TGG | 0.482544 | 1.3:+56491144 | MS.gene07608:CDS |
| TATATGTACCATTGTGTTTG+AGG | 0.486517 | 1.3:-56482816 | None:intergenic |
| GAGCAATACAGCATTATTTG+TGG | 0.490021 | 1.3:+56491774 | MS.gene07608:CDS |
| AACCTGAGCTTGAAAAGCTC+AGG | 0.490108 | 1.3:+56486265 | MS.gene07608:CDS |
| CCATTGAAGAAGATCTAAAC+GGG | 0.498176 | 1.3:+56482985 | MS.gene07608:CDS |
| ATGGTGGACATCCTTGTTGA+TGG | 0.498798 | 1.3:+56485340 | MS.gene07608:CDS |
| AGTGATGATATATCGTTAGA+TGG | 0.498874 | 1.3:+56483120 | MS.gene07608:intron |
| ACAAGGATGTCCACCATTCT+CGG | 0.499451 | 1.3:-56485334 | None:intergenic |
| AGCTCATTATGTCTCGGAGG+CGG | 0.500639 | 1.3:+56490118 | MS.gene07608:intron |
| TCGCATAATACACCAGCATC+AGG | 0.502459 | 1.3:+56489676 | MS.gene07608:CDS |
| CACAAAGCCAAAACTACAAA+CGG | 0.504050 | 1.3:+56491458 | MS.gene07608:CDS |
| CAGGAAGCAGGTCCTGAAGC+TGG | 0.508420 | 1.3:+56491718 | MS.gene07608:intron |
| CTTGATAAGTAAATCATCAA+TGG | 0.510022 | 1.3:-56491421 | None:intergenic |
| CAAGAGAAGTCTATGGATAT+GGG | 0.510930 | 1.3:+56484938 | MS.gene07608:CDS |
| AGTCTATGGATATGGGTTTG+AGG | 0.513380 | 1.3:+56484945 | MS.gene07608:CDS |
| ACAGCAGATCGATTCTTTAG+CGG | 0.514662 | 1.3:-56487961 | None:intergenic |
| GGATAGGATTAATATATTGA+AGG | 0.519305 | 1.3:+56487996 | MS.gene07608:CDS |
| AAAACTTAGAGATTATACTA+AGG | 0.519810 | 1.3:+56484098 | MS.gene07608:CDS |
| GAATCTGGAACGACTTAGAA+TGG | 0.521290 | 1.3:+56491398 | MS.gene07608:CDS |
| GATTCCATCAAGAGGATCCC+TGG | 0.522126 | 1.3:+56492699 | MS.gene07608:CDS |
| GTTGCAAATATACTATCTAA+AGG | 0.530234 | 1.3:+56484072 | MS.gene07608:CDS |
| CATCTTAAACCGAGGCCATA+GGG | 0.530347 | 1.3:-56491143 | None:intergenic |
| TTGTTCAATGCAGACCCACC+AGG | 0.531672 | 1.3:-56492717 | None:intergenic |
| CGTATAGTAAAGTAGCAATT+GGG | 0.531794 | 1.3:-56492667 | None:intergenic |
| TATTTCAGCTCATTATGTCT+CGG | 0.532355 | 1.3:+56490112 | MS.gene07608:intron |
| GAGCTGGCTTCAGCTATATG+AGG | 0.536113 | 1.3:-56488701 | None:intergenic |
| CCACTTAAACTCTGAGTTTG+GGG | 0.538247 | 1.3:+56491282 | MS.gene07608:CDS |
| CCATCTTAAACCGAGGCCAT+AGG | 0.544335 | 1.3:-56491144 | None:intergenic |
| CAGGCAGAAAGCAGTCTCAA+AGG | 0.545719 | 1.3:+56486284 | MS.gene07608:CDS |
| CATGCTTGATTCCAGGAAGC+AGG | 0.549332 | 1.3:+56491706 | MS.gene07608:intron |
| GACTCTCTGATTCCATCAAG+AGG | 0.549335 | 1.3:+56492691 | MS.gene07608:CDS |
| AAACTTAGAGATTATACTAA+GGG | 0.553199 | 1.3:+56484099 | MS.gene07608:CDS |
| TGAGAATGATTTGCGCAAAG+TGG | 0.554547 | 1.3:+56484125 | MS.gene07608:CDS |
| TTGCATTTCGCAAACTGTTG+AGG | 0.557428 | 1.3:-56491180 | None:intergenic |
| CTTGGATTCTTATTTAGACA+AGG | 0.558627 | 1.3:+56490149 | MS.gene07608:CDS |
| GGAAGTGGAGCCACTGGTGA+AGG | 0.561875 | 1.3:+56492539 | MS.gene07608:CDS |
| TAACGCCTCATGACATAATG+AGG | 0.563593 | 1.3:-56491235 | None:intergenic |
| GTATGTTGTTAACTTTCTCA+AGG | 0.565046 | 1.3:+56487081 | MS.gene07608:CDS |
| GTTAACTTTCTCAAGGAACA+TGG | 0.568981 | 1.3:+56487088 | MS.gene07608:CDS |
| TCTAAATAAGAATCCAAGCA+TGG | 0.575363 | 1.3:-56490144 | None:intergenic |
| TTAAACTCTGAGTTTGGGGA+TGG | 0.578938 | 1.3:+56491286 | MS.gene07608:CDS |
| CCAATGCTTGTATGTAAGCA+CGG | 0.580622 | 1.3:-56487849 | None:intergenic |
| TGATTTAATCAAGTTTGTCA+AGG | 0.581810 | 1.3:+56492344 | MS.gene07608:CDS |
| TGGTGGGTCTGCATTGAACA+AGG | 0.583690 | 1.3:+56492719 | MS.gene07608:CDS |
| GTCAGAATGTTACCTGATGC+TGG | 0.583853 | 1.3:-56489688 | None:intergenic |
| TGATAAACCTATAACTGTTG+CGG | 0.590582 | 1.3:+56492518 | MS.gene07608:CDS |
| CATATGGAAACTCTGCTAAG+TGG | 0.592668 | 1.3:+56484427 | MS.gene07608:CDS |
| GCTATATGAGGAATCAATGC+CGG | 0.605953 | 1.3:-56488689 | None:intergenic |
| ATAGGTGGCTGAATCCAAGC+TGG | 0.607893 | 1.3:+56485282 | MS.gene07608:intron |
| TTCATCCTCATTATGTCATG+AGG | 0.609555 | 1.3:+56491230 | MS.gene07608:CDS |
| TGTTGCGGAAGTGGAGCCAC+TGG | 0.613209 | 1.3:+56492533 | MS.gene07608:CDS |
| ATGCAAATGTGAAGACATTG+TGG | 0.614201 | 1.3:+56491197 | MS.gene07608:CDS |
| TGGACTTCAACAGGAGCTTG+AGG | 0.615166 | 1.3:+56483140 | MS.gene07608:CDS |
| TTTGATCTAGGAGCATTCGT+TGG | 0.622940 | 1.3:+56482954 | MS.gene07608:CDS |
| TATTATCCCTCCGAGAATGG+TGG | 0.631865 | 1.3:+56485324 | MS.gene07608:CDS |
| TGCAAATGTGAAGACATTGT+GGG | 0.634645 | 1.3:+56491198 | MS.gene07608:CDS |
| TCGAATACCATCTTAAACCG+AGG | 0.634683 | 1.3:-56491151 | None:intergenic |
| GTTTGTAGAAGTGGACACAA+TGG | 0.634918 | 1.3:+56486212 | MS.gene07608:CDS |
| TTATGTCATGAGGCGTTATG+CGG | 0.635931 | 1.3:+56491240 | MS.gene07608:CDS |
| GGATGTCCACCATTCTCGGA+GGG | 0.636579 | 1.3:-56485330 | None:intergenic |
| TTTGAGGCTTAAGAATCGCA+AGG | 0.639267 | 1.3:+56484961 | MS.gene07608:CDS |
| TTCAGCTCATTATGTCTCGG+AGG | 0.639985 | 1.3:+56490115 | MS.gene07608:intron |
| CCATCAAGAGGATCCCTGGT+GGG | 0.646372 | 1.3:+56492703 | MS.gene07608:CDS |
| ATGAGATTAGGAAATATTCG+AGG | 0.647688 | 1.3:+56492769 | MS.gene07608:CDS |
| GGACATCCTTGTTGATGGAG+AGG | 0.650934 | 1.3:+56485345 | MS.gene07608:CDS |
| TCCATCAAGAGGATCCCTGG+TGG | 0.661975 | 1.3:+56492702 | MS.gene07608:CDS |
| CTTGCAAAATCCTTCACCAG+TGG | 0.665825 | 1.3:-56492549 | None:intergenic |
| TTATATTGATACAATGAACA+AGG | 0.679968 | 1.3:+56487141 | MS.gene07608:CDS |
| TGTTCAATGCAGACCCACCA+GGG | 0.681342 | 1.3:-56492716 | None:intergenic |
| ATAATACCTCTCCATCAACA+AGG | 0.682669 | 1.3:-56485351 | None:intergenic |
| TGATGTCGCCTCAAACACAA+TGG | 0.699806 | 1.3:+56482808 | MS.gene07608:CDS |
| AGGATGTCCACCATTCTCGG+AGG | 0.702552 | 1.3:-56485331 | None:intergenic |
| CTGCAGATATAATTTCTGTG+AGG | 0.705047 | 1.3:+56488891 | MS.gene07608:intron |
| GTAGAGACAAGAAGCAACAG+CGG | 0.747225 | 1.3:+56487916 | MS.gene07608:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 56482803 | 56492800 | 56482803 | ID=MS.gene07608 |
| chr1.3 | mRNA | 56482803 | 56492800 | 56482803 | ID=MS.gene07608.t1;Parent=MS.gene07608 |
| chr1.3 | exon | 56482803 | 56482829 | 56482803 | ID=MS.gene07608.t1.exon1;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56482803 | 56482829 | 56482803 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56482939 | 56483006 | 56482939 | ID=MS.gene07608.t1.exon2;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56482939 | 56483006 | 56482939 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56483122 | 56483179 | 56483122 | ID=MS.gene07608.t1.exon3;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56483122 | 56483179 | 56483122 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56484069 | 56484164 | 56484069 | ID=MS.gene07608.t1.exon4;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56484069 | 56484164 | 56484069 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56484355 | 56484456 | 56484355 | ID=MS.gene07608.t1.exon5;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56484355 | 56484456 | 56484355 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56484899 | 56484982 | 56484899 | ID=MS.gene07608.t1.exon6;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56484899 | 56484982 | 56484899 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56485286 | 56485366 | 56485286 | ID=MS.gene07608.t1.exon7;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56485286 | 56485366 | 56485286 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56486162 | 56486305 | 56486162 | ID=MS.gene07608.t1.exon8;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56486162 | 56486305 | 56486162 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56486442 | 56486533 | 56486442 | ID=MS.gene07608.t1.exon9;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56486442 | 56486533 | 56486442 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56487081 | 56487162 | 56487081 | ID=MS.gene07608.t1.exon10;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56487081 | 56487162 | 56487081 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56487832 | 56488017 | 56487832 | ID=MS.gene07608.t1.exon11;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56487832 | 56488017 | 56487832 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56488677 | 56488792 | 56488677 | ID=MS.gene07608.t1.exon12;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56488677 | 56488792 | 56488677 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56488897 | 56488955 | 56488897 | ID=MS.gene07608.t1.exon13;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56488897 | 56488955 | 56488897 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56489597 | 56489697 | 56489597 | ID=MS.gene07608.t1.exon14;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56489597 | 56489697 | 56489597 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56490120 | 56490170 | 56490120 | ID=MS.gene07608.t1.exon15;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56490120 | 56490170 | 56490120 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56491133 | 56491312 | 56491133 | ID=MS.gene07608.t1.exon16;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56491133 | 56491312 | 56491133 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56491390 | 56491524 | 56491390 | ID=MS.gene07608.t1.exon17;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56491390 | 56491524 | 56491390 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56491721 | 56491795 | 56491721 | ID=MS.gene07608.t1.exon18;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56491721 | 56491795 | 56491721 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56492318 | 56492375 | 56492318 | ID=MS.gene07608.t1.exon19;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56492318 | 56492375 | 56492318 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| chr1.3 | exon | 56492496 | 56492800 | 56492496 | ID=MS.gene07608.t1.exon20;Parent=MS.gene07608.t1 |
| chr1.3 | CDS | 56492496 | 56492800 | 56492496 | ID=cds.MS.gene07608.t1;Parent=MS.gene07608.t1 |
| Gene Sequence |
| Protein sequence |
