AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005491

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005491.t1 MTR_1g086550 95.429 350 10 2 1 350 1 344 0.0 690
MS.gene005491.t1 MTR_4g123020 54.734 338 133 3 1 337 1 319 1.61e-127 368
MS.gene005491.t1 MTR_2g033270 55.030 338 129 4 1 337 1 316 5.34e-123 357
MS.gene005491.t1 MTR_2g019370 51.097 319 142 3 19 337 27 331 7.10e-110 324
MS.gene005491.t1 MTR_2g070870 48.916 323 143 4 15 337 23 323 8.17e-106 313
MS.gene005491.t1 MTR_4g096840 48.447 322 145 4 19 337 28 331 2.91e-103 307
MS.gene005491.t1 MTR_8g461330 48.986 345 154 6 1 337 1 331 1.15e-101 303
MS.gene005491.t1 MTR_4g087100 30.919 359 195 11 16 351 22 350 1.52e-41 149
MS.gene005491.t1 MTR_6g015950 32.154 311 180 8 20 324 39 324 1.81e-39 142
MS.gene005491.t1 MTR_7g068650 32.317 328 189 9 4 320 38 343 3.95e-39 142
MS.gene005491.t1 MTR_4g015790 32.166 314 180 8 18 320 60 351 2.89e-38 140
MS.gene005491.t1 MTR_1g034120 29.787 329 184 8 16 319 22 328 9.76e-38 138
MS.gene005491.t1 MTR_3g096500 30.408 319 170 10 21 317 67 355 1.49e-37 139
MS.gene005491.t1 MTR_4g087140 28.235 340 200 8 3 319 9 327 6.59e-37 136
MS.gene005491.t1 MTR_4g087110 28.412 359 204 9 16 351 22 350 1.34e-36 135
MS.gene005491.t1 MTR_1g034140 31.529 314 179 10 20 319 27 318 1.70e-36 135
MS.gene005491.t1 MTR_4g087090 28.011 357 211 8 3 338 13 344 2.52e-36 134
MS.gene005491.t1 MTR_1g034060 29.179 329 186 8 16 319 22 328 2.65e-36 134
MS.gene005491.t1 MTR_5g055690 29.191 346 209 11 8 343 35 354 6.84e-36 134
MS.gene005491.t1 MTR_8g024120 29.412 340 201 10 10 338 32 343 2.13e-35 132
MS.gene005491.t1 MTR_2g102570 30.312 320 188 8 8 319 41 333 3.47e-35 132
MS.gene005491.t1 MTR_1g102070 29.073 313 184 7 20 317 59 348 8.82e-35 131
MS.gene005491.t1 MTR_1g070135 28.664 307 187 6 20 319 38 319 1.67e-34 129
MS.gene005491.t1 MTR_4g087120 29.189 370 187 14 16 351 22 350 1.78e-34 130
MS.gene005491.t1 MTR_0328s0030 29.429 350 206 12 4 341 29 349 2.37e-34 129
MS.gene005491.t1 MTR_8g033380 30.255 314 184 8 39 342 80 368 4.34e-34 129
MS.gene005491.t1 MTR_5g032870 29.338 317 188 8 20 324 38 330 5.79e-34 128
MS.gene005491.t1 MTR_1g070120 28.213 319 196 8 20 331 38 330 1.05e-33 127
MS.gene005491.t1 MTR_7g062580 29.870 308 182 10 20 319 55 336 1.48e-33 127
MS.gene005491.t1 MTR_0009s0050 29.882 338 204 10 20 349 47 359 1.91e-33 127
MS.gene005491.t1 MTR_3g092890 28.242 347 205 10 6 336 16 334 1.98e-33 127
MS.gene005491.t1 MTR_2g072890 28.729 362 195 12 2 339 34 356 2.44e-33 127
MS.gene005491.t1 MTR_6g464620 27.326 344 211 7 18 345 62 382 4.00e-33 127
MS.gene005491.t1 MTR_0009s0050 30.303 330 197 10 20 341 47 351 4.17e-33 126
MS.gene005491.t1 MTR_5g048550 29.787 329 196 10 20 339 47 349 4.82e-33 126
MS.gene005491.t1 MTR_8g093930 28.049 328 199 8 5 319 33 336 5.05e-33 126
MS.gene005491.t1 MTR_7g016090 31.250 304 179 9 20 318 39 317 6.63e-33 125
MS.gene005491.t1 MTR_7g016090 31.250 304 179 9 20 318 41 319 6.75e-33 125
MS.gene005491.t1 MTR_1g070085 29.114 316 175 10 20 319 37 319 7.63e-33 125
MS.gene005491.t1 MTR_1g070085 29.114 316 175 10 20 319 37 319 7.63e-33 125
MS.gene005491.t1 MTR_3g063180 27.812 320 192 9 20 324 42 337 1.26e-32 125
MS.gene005491.t1 MTR_5g055900 29.878 328 199 9 20 340 47 350 1.52e-32 124
MS.gene005491.t1 MTR_7g062570 29.003 331 196 12 20 339 55 357 6.17e-32 123
MS.gene005491.t1 MTR_5g032880 28.037 321 183 8 19 325 37 323 1.14e-31 126
MS.gene005491.t1 MTR_5g032880 27.987 318 193 7 19 324 375 668 1.56e-30 122
MS.gene005491.t1 MTR_5g055680 28.701 331 205 9 20 343 47 353 1.52e-31 122
MS.gene005491.t1 MTR_3g058610 27.329 322 207 8 24 342 49 346 2.86e-31 121
MS.gene005491.t1 MTR_3g015110 41.489 188 87 6 1 169 1 184 3.10e-31 117
MS.gene005491.t1 MTR_3g015110 47.692 65 30 1 222 286 149 209 8.95e-12 64.3
MS.gene005491.t1 MTR_7g062550 29.091 330 201 10 20 341 60 364 4.13e-31 121
MS.gene005491.t1 MTR_7g063730 27.576 330 204 11 20 340 64 367 6.31e-31 120
MS.gene005491.t1 MTR_8g041620 29.143 350 186 14 18 342 66 378 7.38e-31 120
MS.gene005491.t1 MTR_5g048570 28.743 334 203 11 17 341 42 349 2.86e-30 118
MS.gene005491.t1 MTR_3g070860 27.439 328 204 9 4 320 34 338 1.12e-29 117
MS.gene005491.t1 MTR_5g048470 27.327 333 204 12 20 341 53 358 1.17e-29 117
MS.gene005491.t1 MTR_5g048740 27.666 347 213 11 4 339 29 348 1.36e-29 116
MS.gene005491.t1 MTR_0009s0480 27.042 355 208 11 4 341 30 350 1.39e-29 116
MS.gene005491.t1 MTR_3g088565 26.708 322 191 11 18 325 1 291 1.82e-29 115
MS.gene005491.t1 MTR_2g069010 27.035 344 201 9 18 342 67 379 1.90e-29 117
MS.gene005491.t1 MTR_8g064200 27.327 333 204 12 20 341 52 357 2.28e-29 116
MS.gene005491.t1 MTR_5g055820 28.247 308 196 6 39 343 69 354 2.41e-29 116
MS.gene005491.t1 MTR_8g064200 27.327 333 204 12 20 341 57 362 2.52e-29 116
MS.gene005491.t1 MTR_5g022020 27.832 309 189 9 17 318 41 322 2.96e-29 115
MS.gene005491.t1 MTR_2g069210 30.060 336 186 13 20 338 64 367 3.47e-29 115
MS.gene005491.t1 MTR_2g072910 29.641 334 192 14 20 339 51 355 6.43e-29 115
MS.gene005491.t1 MTR_2g069300 29.022 317 176 13 20 319 54 338 1.46e-28 114
MS.gene005491.t1 MTR_8g075890 27.245 323 206 8 24 342 49 346 1.84e-28 114
MS.gene005491.t1 MTR_1g081840 28.808 302 176 9 32 321 72 346 2.65e-28 113
MS.gene005491.t1 MTR_1g027290 28.446 341 191 11 20 338 29 338 6.69e-28 112
MS.gene005491.t1 MTR_8g093980 25.982 331 211 7 18 336 57 365 7.41e-28 112
MS.gene005491.t1 MTR_5g059130 28.571 308 187 9 20 319 44 326 8.04e-28 111
MS.gene005491.t1 MTR_7g451860 27.070 314 181 7 20 321 41 318 1.01e-27 111
MS.gene005491.t1 MTR_7g047670 27.070 314 181 7 20 321 41 318 1.01e-27 111
MS.gene005491.t1 MTR_3g072810 29.560 318 196 7 12 324 32 326 1.34e-27 110
MS.gene005491.t1 MTR_5g065010 27.711 332 199 9 20 338 39 342 1.46e-27 110
MS.gene005491.t1 MTR_5g005570 27.742 310 181 9 20 321 37 311 1.61e-27 110
MS.gene005491.t1 MTR_7g062600 27.628 333 203 12 20 341 51 356 1.61e-27 111
MS.gene005491.t1 MTR_1g011580 30.070 286 163 8 20 298 63 318 1.74e-27 111
MS.gene005491.t1 MTR_8g041600 29.226 349 191 16 18 343 66 381 1.76e-27 111
MS.gene005491.t1 MTR_2g069190 28.955 335 191 10 20 338 68 371 1.80e-27 111
MS.gene005491.t1 MTR_2g069060 28.060 335 195 11 18 338 47 349 1.82e-27 110
MS.gene005491.t1 MTR_1g033810 30.031 323 184 11 10 319 37 330 1.89e-27 110
MS.gene005491.t1 MTR_8g075830 27.077 325 204 9 24 342 49 346 2.23e-27 110
MS.gene005491.t1 MTR_7g016080 28.115 313 181 11 20 324 41 317 2.46e-27 110
MS.gene005491.t1 MTR_2g437380 27.358 318 195 10 30 339 68 357 3.01e-27 110
MS.gene005491.t1 MTR_5g055800 28.000 350 206 12 4 339 31 348 5.16e-27 109
MS.gene005491.t1 MTR_7g077670 28.076 317 176 9 20 319 11 292 6.31e-27 108
MS.gene005491.t1 MTR_1g093120 26.781 351 196 12 11 338 58 370 6.66e-27 109
MS.gene005491.t1 MTR_2g083000 28.435 313 175 10 20 321 33 307 7.01e-27 108
MS.gene005491.t1 MTR_2g025120 26.582 316 198 10 20 328 4 292 8.68e-27 108
MS.gene005491.t1 MTR_3g091360 25.706 354 211 12 6 341 38 357 1.32e-26 108
MS.gene005491.t1 MTR_4g087130 28.852 357 200 12 16 349 22 347 2.31e-26 108
MS.gene005491.t1 MTR_1g062110 28.758 306 178 9 20 311 66 345 2.37e-26 108
MS.gene005491.t1 MTR_2g068840 25.731 342 191 8 10 326 45 348 2.51e-26 108
MS.gene005491.t1 MTR_5g048850 27.576 330 202 12 20 339 47 349 3.18e-26 107
MS.gene005491.t1 MTR_2g069090 28.783 337 190 12 20 338 68 372 3.35e-26 107
MS.gene005491.t1 MTR_1g093110 27.273 341 190 13 20 338 70 374 5.67e-26 107
MS.gene005491.t1 MTR_7g062560 25.817 306 187 10 20 319 62 333 1.02e-25 106
MS.gene005491.t1 MTR_7g056347 27.168 346 190 13 18 338 65 373 1.18e-25 106
MS.gene005491.t1 MTR_1g093140 25.424 354 205 12 8 338 61 378 1.30e-25 106
MS.gene005491.t1 MTR_0009s0050 34.091 176 94 4 176 349 24 179 1.84e-25 101
MS.gene005491.t1 MTR_8g009080 27.381 336 195 11 20 338 94 397 2.96e-25 105
MS.gene005491.t1 MTR_5g082750 28.662 314 186 13 20 320 49 337 3.81e-25 104
MS.gene005491.t1 MTR_3g091350 25.641 351 211 11 9 342 48 365 3.87e-25 104
MS.gene005491.t1 MTR_0032s0040 27.273 330 205 10 20 339 70 374 5.16e-25 104
MS.gene005491.t1 MTR_1g070085 32.804 189 102 5 132 319 77 241 5.60e-25 102
MS.gene005491.t1 MTR_7g102820 26.398 322 191 9 18 319 65 360 6.53e-25 104
MS.gene005491.t1 MTR_5g059140 27.358 318 198 9 1 308 21 315 7.46e-25 103
MS.gene005491.t1 MTR_1g032220 25.602 332 197 9 20 336 73 369 1.03e-24 103
MS.gene005491.t1 MTR_5g011250 27.554 323 193 11 13 319 40 337 1.08e-24 103
MS.gene005491.t1 MTR_3g088745 26.837 313 193 9 35 336 58 345 1.35e-24 103
MS.gene005491.t1 MTR_1g070100 32.979 188 101 5 132 318 73 236 1.43e-24 101
MS.gene005491.t1 MTR_8g028435 27.300 337 195 12 20 338 60 364 1.59e-24 103
MS.gene005491.t1 MTR_2g068960 26.074 349 190 8 18 338 61 369 1.92e-24 102
MS.gene005491.t1 MTR_0009s0050 34.091 176 94 4 176 349 106 261 3.16e-24 100
MS.gene005491.t1 MTR_3g040410 26.667 315 187 9 20 321 6 289 3.54e-24 101
MS.gene005491.t1 MTR_7g029655 27.114 343 191 12 20 340 67 372 4.88e-24 101
MS.gene005491.t1 MTR_4g074130 26.452 310 187 9 20 321 40 316 5.11e-24 101
MS.gene005491.t1 MTR_1g070080 25.776 322 204 9 20 333 38 332 6.41e-24 100
MS.gene005491.t1 MTR_8g009170 27.528 356 172 15 20 338 60 366 7.43e-24 101
MS.gene005491.t1 MTR_0009s0050 35.119 168 87 4 176 341 106 253 7.72e-24 99.0
MS.gene005491.t1 MTR_1g043760 26.506 332 183 12 12 319 42 336 1.16e-23 100
MS.gene005491.t1 MTR_3g083370 26.266 316 197 11 28 337 16 301 1.43e-23 99.4
MS.gene005491.t1 MTR_8g030880 27.010 311 192 9 18 319 8 292 1.71e-23 99.4
MS.gene005491.t1 MTR_2g068950 25.852 352 187 9 18 338 61 369 3.58e-23 99.4
MS.gene005491.t1 MTR_1g043810 26.235 324 181 10 12 312 42 330 4.04e-23 99.0
MS.gene005491.t1 MTR_5g085330 26.480 321 198 10 18 328 3 295 4.08e-23 98.2
MS.gene005491.t1 MTR_3g117485 26.871 294 181 9 26 312 63 329 7.44e-23 98.2
MS.gene005491.t1 MTR_4g024660 27.536 345 190 12 18 338 65 373 1.38e-22 97.8
MS.gene005491.t1 MTR_4g093840 26.549 339 195 11 20 338 62 366 5.60e-22 95.9
MS.gene005491.t1 MTR_1g043770 27.124 306 180 10 20 312 53 328 8.71e-22 95.1
MS.gene005491.t1 MTR_4g117880 26.377 345 190 14 20 338 60 366 9.21e-22 95.1
MS.gene005491.t1 MTR_8g009090 26.686 341 192 13 20 338 60 364 1.02e-21 95.1
MS.gene005491.t1 MTR_3g108520 24.484 339 200 6 16 336 14 314 1.21e-21 94.4
MS.gene005491.t1 MTR_0009s0400 36.232 138 85 3 206 341 11 147 1.49e-21 90.1
MS.gene005491.t1 MTR_8g009160 26.706 337 197 13 20 338 60 364 1.62e-21 94.7
MS.gene005491.t1 MTR_8g009110 26.531 294 175 10 36 319 83 345 1.68e-21 94.7
MS.gene005491.t1 MTR_2g083030 24.843 318 181 10 20 321 37 312 1.88e-21 94.0
MS.gene005491.t1 MTR_3g072820 25.143 350 191 13 6 325 19 327 1.98e-21 94.0
MS.gene005491.t1 MTR_2g069020 24.926 337 206 9 18 338 65 370 2.50e-21 94.0
MS.gene005491.t1 MTR_8g074050 26.061 330 206 11 20 338 52 354 3.13e-21 93.6
MS.gene005491.t1 MTR_2g069020 24.926 337 206 9 18 338 65 370 4.04e-21 94.0
MS.gene005491.t1 MTR_1g043775 25.240 313 178 9 20 312 54 330 5.07e-21 93.2
MS.gene005491.t1 MTR_3g117420 25.078 319 199 10 20 323 52 345 8.14e-21 92.4
MS.gene005491.t1 MTR_4g116010 28.239 301 185 10 18 312 48 323 9.66e-21 92.0
MS.gene005491.t1 MTR_3g117485 25.993 277 172 8 43 312 7 257 1.09e-20 90.9
MS.gene005491.t1 MTR_0056s0160 27.751 209 126 5 135 341 51 236 1.55e-20 89.4
MS.gene005491.t1 MTR_5g055690 28.626 262 152 10 8 260 35 270 2.31e-20 89.7
MS.gene005491.t1 MTR_4g021380 28.910 211 127 4 128 336 126 315 3.09e-20 90.1
MS.gene005491.t1 MTR_5g027230 26.101 318 188 10 20 327 6 286 4.96e-20 89.4
MS.gene005491.t1 MTR_8g062600 24.857 350 201 13 14 338 61 373 7.82e-20 89.7
MS.gene005491.t1 MTR_8g074070 25.836 329 208 10 20 338 52 354 8.69e-20 89.4
MS.gene005491.t1 MTR_2g068800 26.855 283 139 10 10 274 45 277 8.91e-20 88.2
MS.gene005491.t1 MTR_1g070135 29.032 248 144 6 20 260 38 260 1.33e-19 87.8
MS.gene005491.t1 MTR_1g032250 36.090 133 82 3 206 336 238 369 1.39e-19 89.0
MS.gene005491.t1 MTR_7g045650 29.210 291 168 12 20 300 60 322 2.39e-19 87.8
MS.gene005491.t1 MTR_8g469400 27.244 312 174 9 44 338 85 360 2.42e-19 88.2
MS.gene005491.t1 MTR_1g048940 24.784 347 220 11 14 348 39 356 3.02e-19 87.8
MS.gene005491.t1 MTR_4g021360 28.571 210 129 4 128 336 123 312 3.05e-19 87.4
MS.gene005491.t1 MTR_7g081710 25.526 333 204 12 20 338 49 351 6.34e-19 87.0
MS.gene005491.t1 MTR_5g025090 26.837 313 180 11 20 321 5 279 1.15e-18 85.5
MS.gene005491.t1 MTR_1g032140 39.474 114 66 3 208 319 233 345 1.41e-18 86.3
MS.gene005491.t1 MTR_3g026150 24.776 335 208 12 17 338 57 360 2.00e-18 85.5
MS.gene005491.t1 MTR_7g056393 27.666 347 187 15 18 338 65 373 2.23e-18 85.5
MS.gene005491.t1 MTR_1g027310 24.116 311 160 8 20 318 49 295 3.44e-18 84.3
MS.gene005491.t1 MTR_2g437380 24.828 290 183 9 58 339 1 263 3.47e-18 83.6
MS.gene005491.t1 MTR_4g119410 26.513 347 191 14 18 338 65 373 5.16e-18 84.7
MS.gene005491.t1 MTR_4g100600 25.826 333 208 10 15 332 4 312 6.82e-18 83.6
MS.gene005491.t1 MTR_4g100590 25.602 332 205 9 15 332 4 307 7.69e-18 83.6
MS.gene005491.t1 MTR_4g011720 26.207 290 178 8 36 319 33 292 1.23e-17 82.8
MS.gene005491.t1 MTR_8g006930 26.667 345 193 13 18 338 65 373 1.32e-17 83.6
MS.gene005491.t1 MTR_5g025050 23.975 317 209 7 20 333 5 292 2.38e-17 82.0
MS.gene005491.t1 MTR_8g008930 35.556 135 82 3 208 338 232 365 2.68e-17 82.4
MS.gene005491.t1 MTR_1g070110 33.333 123 80 2 211 333 107 227 6.85e-17 79.3
MS.gene005491.t1 MTR_8g009180 36.923 130 77 3 208 333 161 289 9.08e-17 80.1
MS.gene005491.t1 MTR_8g063070 25.076 327 200 11 18 329 65 361 1.12e-16 80.9
MS.gene005491.t1 MTR_5g024940 33.803 142 86 4 194 331 130 267 1.27e-16 79.3
MS.gene005491.t1 MTR_1g070185 24.516 310 193 7 20 319 69 347 2.60e-16 79.7
MS.gene005491.t1 MTR_4g011690 24.516 310 196 9 36 339 33 310 6.26e-16 77.8
MS.gene005491.t1 MTR_1g062110 28.235 255 143 9 20 260 66 294 8.75e-16 77.4
MS.gene005491.t1 MTR_7g078010 25.073 343 174 15 12 319 59 353 8.91e-16 78.2
MS.gene005491.t1 MTR_7g105070 33.813 139 82 5 208 339 228 363 1.76e-15 77.0
MS.gene005491.t1 MTR_7g102720 36.036 111 70 1 210 319 205 315 1.40e-14 74.3
MS.gene005491.t1 MTR_3g045230 34.234 111 72 1 210 319 224 334 1.57e-14 74.3
MS.gene005491.t1 MTR_8g074070 24.620 329 193 13 20 338 52 335 2.00e-14 73.6
MS.gene005491.t1 MTR_7g056353 27.189 217 128 6 128 337 153 346 3.63e-14 73.9
MS.gene005491.t1 MTR_5g048850 27.490 251 146 11 20 261 47 270 5.25e-14 72.0
MS.gene005491.t1 MTR_2g025120 24.696 247 153 9 20 260 4 223 7.26e-14 70.5
MS.gene005491.t1 MTR_7g090520 34.545 110 69 2 205 313 180 287 9.70e-14 71.6
MS.gene005491.t1 MTR_0009s0480 25.275 273 154 10 4 260 30 268 1.48e-13 70.5
MS.gene005491.t1 MTR_4g132770 33.333 120 76 3 210 326 43 161 2.14e-13 67.8
MS.gene005491.t1 MTR_3g043900 34.234 111 72 1 210 319 223 333 2.25e-13 70.9
MS.gene005491.t1 MTR_4g115990 24.324 296 186 6 18 312 44 302 4.78e-13 69.3
MS.gene005491.t1 MTR_3g026150 24.031 258 163 8 86 338 28 257 1.07e-12 67.8
MS.gene005491.t1 MTR_6g092620 21.739 322 209 11 18 330 1 288 1.31e-12 68.2
MS.gene005491.t1 MTR_8g009080 25.296 253 144 9 20 259 94 314 1.46e-12 68.2
MS.gene005491.t1 MTR_5g025060 31.250 128 85 3 208 333 142 268 1.50e-12 67.4
MS.gene005491.t1 MTR_8g041600 27.027 259 140 12 18 260 66 291 1.99e-12 67.4
MS.gene005491.t1 MTR_8g009120 34.646 127 73 4 208 329 220 341 5.27e-12 66.6
MS.gene005491.t1 MTR_2g069060 26.172 256 144 9 18 260 25 248 9.68e-12 64.7
MS.gene005491.t1 MTR_8g009080 25.200 250 142 10 20 256 94 311 1.69e-11 65.1
MS.gene005491.t1 MTR_1g043840 28.571 168 94 4 123 287 40 184 3.64e-11 63.9
MS.gene005491.t1 MTR_3g083370 24.895 237 145 9 28 260 16 223 4.11e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005491.t1 AT1G02400 55.977 343 129 4 1 337 1 327 4.18e-133 383
MS.gene005491.t1 AT1G47990 52.941 323 133 6 20 340 15 320 1.33e-110 325
MS.gene005491.t1 AT1G30040 44.699 349 165 4 1 339 2 332 3.29e-99 297
MS.gene005491.t1 AT1G02400 52.313 281 113 3 1 276 1 265 2.79e-97 289
MS.gene005491.t1 AT2G34555 45.679 324 157 2 14 337 21 325 3.64e-96 289
MS.gene005491.t1 AT1G78440 46.226 318 156 3 20 337 18 320 4.40e-95 286
MS.gene005491.t1 AT1G30040 42.222 270 128 4 1 260 2 253 9.76e-66 209
MS.gene005491.t1 AT5G24530 31.761 318 182 9 20 328 38 329 3.43e-36 134
MS.gene005491.t1 AT3G19010 27.114 343 205 10 20 339 28 348 4.57e-36 134
MS.gene005491.t1 AT3G19010 27.114 343 205 10 20 339 28 348 4.57e-36 134
MS.gene005491.t1 AT3G19000 28.947 342 197 10 20 337 32 351 7.04e-36 134
MS.gene005491.t1 AT2G38240 31.111 315 189 8 12 320 40 332 9.10e-36 133
MS.gene005491.t1 AT1G80330 28.834 326 201 9 20 338 49 350 9.57e-36 133
MS.gene005491.t1 AT5G05600 31.429 315 182 10 17 320 59 350 3.18e-35 132
MS.gene005491.t1 AT3G55970 31.046 306 181 9 22 321 62 343 4.07e-34 129
MS.gene005491.t1 AT4G16330 28.527 319 186 11 17 325 64 350 4.10e-34 129
MS.gene005491.t1 AT4G25420 28.707 317 187 9 18 319 59 351 1.44e-33 128
MS.gene005491.t1 AT5G08640 28.875 329 196 8 6 319 20 325 3.85e-33 126
MS.gene005491.t1 AT5G08640 28.875 329 196 8 6 319 20 325 3.85e-33 126
MS.gene005491.t1 AT3G19010 26.706 337 184 10 20 339 28 318 4.28e-33 125
MS.gene005491.t1 AT5G51810 29.712 313 185 9 18 319 61 349 4.62e-33 126
MS.gene005491.t1 AT5G07200 29.446 343 190 12 20 338 58 372 2.79e-32 124
MS.gene005491.t1 AT4G10490 29.532 342 190 14 14 337 36 344 3.11e-32 124
MS.gene005491.t1 AT1G15550 29.085 306 186 6 20 319 57 337 3.25e-31 121
MS.gene005491.t1 AT5G63600 29.508 305 188 7 17 319 30 309 8.63e-31 119
MS.gene005491.t1 AT1G80340 30.592 304 184 6 20 319 50 330 9.40e-31 119
MS.gene005491.t1 AT1G78550 29.394 330 196 11 20 338 53 356 1.24e-30 119
MS.gene005491.t1 AT4G10500 26.888 331 202 11 19 337 43 345 2.87e-30 118
MS.gene005491.t1 AT5G59530 29.213 356 200 11 3 338 41 364 4.05e-30 118
MS.gene005491.t1 AT5G63600 29.739 306 187 8 17 319 30 310 7.10e-30 117
MS.gene005491.t1 AT1G17020 27.190 331 208 9 18 338 51 358 1.18e-29 117
MS.gene005491.t1 AT1G55290 30.645 310 175 12 20 319 62 341 2.10e-29 116
MS.gene005491.t1 AT2G36690 29.448 326 187 9 2 311 37 335 2.98e-29 116
MS.gene005491.t1 AT2G36690 29.448 326 187 9 2 311 37 335 2.98e-29 116
MS.gene005491.t1 AT3G21420 30.205 341 183 14 20 338 55 362 4.99e-29 115
MS.gene005491.t1 AT1G60980 28.182 330 185 12 12 319 49 348 5.71e-29 115
MS.gene005491.t1 AT1G04380 26.087 345 213 10 6 338 31 345 6.13e-28 112
MS.gene005491.t1 AT3G11180 28.308 325 201 10 4 320 79 379 8.32e-28 112
MS.gene005491.t1 AT3G51240 26.506 332 210 10 24 350 48 350 8.85e-28 112
MS.gene005491.t1 AT3G11180 28.308 325 201 10 4 320 79 379 1.02e-27 112
MS.gene005491.t1 AT4G21200 27.928 333 178 13 6 321 28 315 1.22e-27 111
MS.gene005491.t1 AT3G13610 27.419 310 187 8 19 319 61 341 2.18e-27 110
MS.gene005491.t1 AT1G50960 28.261 322 186 9 12 323 32 318 2.61e-27 110
MS.gene005491.t1 AT1G06620 27.864 323 175 10 20 321 62 347 5.16e-27 110
MS.gene005491.t1 AT1G44090 26.946 334 203 11 20 336 63 372 6.21e-27 110
MS.gene005491.t1 AT3G61400 25.369 339 205 8 20 338 60 370 3.03e-26 107
MS.gene005491.t1 AT4G21690 28.086 324 189 11 14 322 41 335 4.22e-26 107
MS.gene005491.t1 AT4G22880 27.744 328 194 13 9 319 36 337 4.23e-26 107
MS.gene005491.t1 AT4G22880 27.744 328 194 13 9 319 36 337 4.23e-26 107
MS.gene005491.t1 AT4G22880 27.744 328 194 13 9 319 36 337 4.23e-26 107
MS.gene005491.t1 AT3G12900 28.105 306 183 8 23 319 59 336 4.33e-26 107
MS.gene005491.t1 AT1G62380 27.160 324 191 12 16 328 3 292 5.67e-26 106
MS.gene005491.t1 AT1G12010 27.673 318 193 11 18 328 5 292 7.08e-26 105
MS.gene005491.t1 AT5G43440 25.210 357 214 12 3 338 41 365 7.83e-26 106
MS.gene005491.t1 AT5G43450 26.625 323 185 12 20 325 61 348 1.01e-25 106
MS.gene005491.t1 AT5G63590 27.500 320 202 9 8 320 2 298 2.02e-25 104
MS.gene005491.t1 AT4G25300 28.571 329 201 11 20 338 52 356 2.79e-25 105
MS.gene005491.t1 AT2G30840 27.729 339 192 11 20 338 57 362 3.35e-25 105
MS.gene005491.t1 AT1G17010 26.190 336 202 11 20 339 54 359 8.59e-25 103
MS.gene005491.t1 AT5G59540 28.235 340 189 11 20 338 61 366 1.09e-24 103
MS.gene005491.t1 AT1G78550 27.759 299 186 9 45 338 5 278 1.27e-24 101
MS.gene005491.t1 AT2G30830 28.190 337 206 10 13 338 47 358 1.88e-24 102
MS.gene005491.t1 AT5G43935 28.105 306 172 9 20 319 19 282 5.19e-24 100
MS.gene005491.t1 AT1G77330 26.332 319 184 11 18 319 1 285 5.54e-24 100
MS.gene005491.t1 AT1G03400 25.444 338 199 10 16 338 52 351 1.83e-23 100
MS.gene005491.t1 AT3G19000 28.195 266 150 9 20 266 32 275 4.69e-23 97.4
MS.gene005491.t1 AT4G25310 28.013 307 185 11 39 338 76 353 5.15e-23 98.6
MS.gene005491.t1 AT2G25450 26.611 357 197 12 4 338 46 359 6.83e-23 98.6
MS.gene005491.t1 AT2G44800 27.586 319 186 9 15 319 47 334 1.76e-22 97.4
MS.gene005491.t1 AT1G06645 27.976 336 192 13 20 338 77 379 2.17e-22 97.4
MS.gene005491.t1 AT1G03410 24.793 363 203 14 6 338 39 361 2.27e-22 97.1
MS.gene005491.t1 AT1G52820 26.510 298 179 8 36 325 36 301 2.89e-22 95.9
MS.gene005491.t1 AT1G03410 24.793 363 203 14 6 338 76 398 3.94e-22 96.7
MS.gene005491.t1 AT1G05010 25.806 310 192 10 28 328 16 296 4.33e-22 95.5
MS.gene005491.t1 AT4G25420 29.457 258 143 9 18 260 59 292 5.77e-22 94.7
MS.gene005491.t1 AT5G51810 29.572 257 146 9 18 263 61 293 6.13e-22 94.7
MS.gene005491.t1 AT3G60290 26.349 315 195 9 15 319 47 334 7.61e-22 95.5
MS.gene005491.t1 AT1G14130 28.387 310 175 12 17 315 6 279 1.54e-21 94.0
MS.gene005491.t1 AT1G04350 25.723 346 197 13 15 338 53 360 2.13e-21 94.4
MS.gene005491.t1 AT5G63595 25.890 309 172 8 6 309 11 267 2.89e-21 92.4
MS.gene005491.t1 AT2G30840 27.139 339 188 12 20 338 57 356 4.04e-21 93.6
MS.gene005491.t1 AT3G50210 26.667 285 174 8 30 299 32 296 6.32e-21 92.4
MS.gene005491.t1 AT3G50210 26.667 285 174 8 30 299 32 296 6.32e-21 92.4
MS.gene005491.t1 AT3G50210 26.667 285 174 8 30 299 32 296 6.32e-21 92.4
MS.gene005491.t1 AT3G49630 25.566 309 176 9 20 299 9 292 8.57e-21 92.0
MS.gene005491.t1 AT3G49620 25.316 316 182 8 20 306 34 324 8.89e-21 92.4
MS.gene005491.t1 AT4G16330 25.818 275 163 10 61 325 1 244 1.62e-20 90.1
MS.gene005491.t1 AT3G49630 25.862 290 172 8 28 299 24 288 1.78e-20 91.3
MS.gene005491.t1 AT1G06640 26.050 357 202 14 4 338 53 369 1.80e-20 91.7
MS.gene005491.t1 AT1G06650 27.324 355 200 15 4 338 53 369 2.73e-20 91.3
MS.gene005491.t1 AT5G51310 26.045 311 164 11 20 305 5 274 4.35e-20 90.1
MS.gene005491.t1 AT5G20400 26.974 304 186 10 20 312 45 323 8.47e-20 89.4
MS.gene005491.t1 AT2G19590 26.286 350 196 16 14 345 5 310 1.22e-19 88.6
MS.gene005491.t1 AT3G51240 28.829 222 129 8 131 350 72 266 3.07e-19 86.7
MS.gene005491.t1 AT3G19010 26.336 262 153 9 20 263 28 267 3.65e-19 87.0
MS.gene005491.t1 AT1G49390 26.471 306 191 9 20 315 45 326 4.38e-19 87.4
MS.gene005491.t1 AT4G03070 24.924 329 212 7 20 336 14 319 7.57e-19 86.3
MS.gene005491.t1 AT5G20550 27.778 306 184 11 20 313 45 325 1.42e-18 85.9
MS.gene005491.t1 AT3G55970 29.388 245 143 9 22 260 62 282 1.89e-18 85.1
MS.gene005491.t1 AT4G25300 36.296 135 83 3 206 338 129 262 2.18e-18 84.0
MS.gene005491.t1 AT5G63580 31.349 252 138 9 17 260 16 240 2.27e-17 80.9
MS.gene005491.t1 AT1G14120 26.490 302 185 8 20 315 8 278 4.39e-17 81.3
MS.gene005491.t1 AT1G14120 26.490 302 185 8 20 315 8 278 4.39e-17 81.3
MS.gene005491.t1 AT1G14120 26.490 302 185 8 20 315 8 278 4.39e-17 81.3
MS.gene005491.t1 AT5G63580 31.200 250 137 9 17 258 16 238 5.88e-17 79.7
MS.gene005491.t1 AT4G23340 23.871 310 204 9 17 319 7 291 7.47e-17 80.9
MS.gene005491.t1 AT4G25310 25.490 306 166 11 39 338 76 325 1.26e-16 80.1
MS.gene005491.t1 AT1G49390 26.199 271 172 8 49 315 1 247 1.52e-16 79.0
MS.gene005491.t1 AT5G58660 24.925 333 195 12 16 325 30 330 2.04e-16 79.7
MS.gene005491.t1 AT1G28030 27.719 285 178 8 36 316 37 297 2.44e-16 79.3
MS.gene005491.t1 AT5G05600 29.020 255 147 10 17 260 59 290 2.89e-16 78.6
MS.gene005491.t1 AT4G03050 34.211 114 74 1 204 316 269 382 8.97e-15 75.5
MS.gene005491.t1 AT4G03050 34.211 114 74 1 204 316 269 382 8.97e-15 75.5
MS.gene005491.t1 AT5G54000 26.117 291 180 10 29 312 62 324 3.30e-14 73.2
MS.gene005491.t1 AT1G52790 25.574 305 191 8 20 314 5 283 5.69e-14 72.0
MS.gene005491.t1 AT2G19590 33.571 140 82 6 210 345 163 295 1.52e-13 70.9
MS.gene005491.t1 AT4G23340 31.818 110 75 0 210 319 64 173 1.63e-13 69.3
MS.gene005491.t1 AT3G47190 22.500 320 198 10 14 320 26 308 3.79e-13 70.1
MS.gene005491.t1 AT3G49630 34.021 97 63 1 204 299 123 219 6.37e-13 68.6
MS.gene005491.t1 AT4G22870 36.559 93 57 2 228 319 2 93 8.44e-13 64.7
MS.gene005491.t1 AT5G43450 25.197 254 141 11 20 259 61 279 8.84e-13 68.6
MS.gene005491.t1 AT5G43440 24.088 274 159 10 3 259 41 282 1.10e-12 68.2
MS.gene005491.t1 AT1G52800 23.548 310 198 7 16 314 6 287 1.10e-12 68.6
MS.gene005491.t1 AT1G80320 30.973 113 76 1 202 314 178 288 2.07e-12 67.8
MS.gene005491.t1 AT5G54000 25.092 271 169 9 49 312 1 244 6.14e-12 65.9
MS.gene005491.t1 AT4G22870 36.145 83 52 1 238 319 52 134 6.16e-12 63.5
MS.gene005491.t1 AT3G50210 32.323 99 66 1 202 299 116 214 3.32e-11 63.2
MS.gene005491.t1 AT5G58660 24.719 267 157 10 16 260 30 274 6.03e-11 62.8

Find 89 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTATTATTGGTATTT+TGG 0.091907 1.1:+64257784 None:intergenic
GAAATTAAGCAACGATAATT+TGG 0.177216 1.1:-64257820 MS.gene005491:CDS
AATAATAATACTATTGGTTT+TGG 0.205406 1.1:-64257762 MS.gene005491:CDS
GATCTCTCAGAGATTGAATT+AGG 0.224819 1.1:+64260129 None:intergenic
CATATGCTGCTTGTTTATAT+TGG 0.231164 1.1:+64257275 None:intergenic
GCTGGTACTTCTACTCCTTT+TGG 0.281710 1.1:-64260222 MS.gene005491:CDS
ATATGCTGCTTGTTTATATT+GGG 0.296422 1.1:+64257276 None:intergenic
AAAGTACATCATTGACATTC+TGG 0.322538 1.1:+64257387 None:intergenic
GTGAAAGCTTGCGAAGAATA+TGG 0.329647 1.1:-64260348 MS.gene005491:CDS
ATTGGTCCCAATGGTGATAA+AGG 0.344802 1.1:-64260183 MS.gene005491:CDS
AACCTTGAAATAACCTCCTT+TGG 0.350413 1.1:+64260297 None:intergenic
CATGGTTGGAGATGCCCTTC+AGG 0.361510 1.1:-64257619 MS.gene005491:intron
GCTTATACAGAGATGGGTTA+TGG 0.366168 1.1:+64257311 None:intergenic
TTGCAGCACCACCGTTGAAT+TGG 0.378378 1.1:-64257366 MS.gene005491:CDS
TTAGTTCTTATCATGGAAGT+TGG 0.398200 1.1:+64260441 None:intergenic
AACCATGACATAGAATTCAT+TGG 0.407705 1.1:+64257635 None:intergenic
TCATTGGGGTCAGGAGGGAC+AGG 0.413351 1.1:+64257651 None:intergenic
CTTATACAGAGATGGGTTAT+GGG 0.418310 1.1:+64257312 None:intergenic
TTGAATTAGGATTGGTGTGT+AGG 0.418501 1.1:+64260142 None:intergenic
TTTATATTGGGCCCATGTAA+AGG 0.421234 1.1:+64257288 None:intergenic
AAGATCATTCTACCAAGTTC+AGG 0.426140 1.1:-64260092 MS.gene005491:intron
ACCATGACATAGAATTCATT+GGG 0.428603 1.1:+64257636 None:intergenic
AAGGTCACCTTTATCACCAT+TGG 0.430297 1.1:+64260176 None:intergenic
GTCAGAGTTGTCGGAATTAG+TGG 0.431588 1.1:-64260370 MS.gene005491:CDS
TTGCTTAGTGAGGACTTGTC+AGG 0.433510 1.1:+64257906 None:intergenic
TTATATTGGGCCCATGTAAA+GGG 0.438267 1.1:+64257289 None:intergenic
TTGCTTAATTTCTTCACCAC+TGG 0.441506 1.1:+64257831 None:intergenic
CAGCACCACCGTTGAATTGG+TGG 0.442817 1.1:-64257363 MS.gene005491:CDS
CTGAAGGCCACCTACGTTGT+TGG 0.445461 1.1:+64257701 None:intergenic
GCTGTCACCATCTTTGATAA+TGG 0.454282 1.1:+64257334 None:intergenic
ATTTCAAGGTTGGAAAATGA+AGG 0.459537 1.1:-64260285 MS.gene005491:CDS
TGTTGGACCGTAAGATGGTT+AGG 0.459968 1.1:+64257718 None:intergenic
AAAGGAGGTTATTTCAAGGT+TGG 0.461082 1.1:-64260295 MS.gene005491:CDS
CATGGAAAGGTCAGAGTTGT+CGG 0.463043 1.1:-64260379 MS.gene005491:CDS
CTCTGTATAAGCCCTTTACA+TGG 0.465843 1.1:-64257300 MS.gene005491:CDS
AAGTACATCATTGACATTCT+GGG 0.473047 1.1:+64257388 None:intergenic
CTTAATTTCTTCACCACTGG+AGG 0.473489 1.1:+64257834 None:intergenic
AGGTCACCTTTATCACCATT+GGG 0.474427 1.1:+64260177 None:intergenic
GCAGCATATGCTCTTCGATT+GGG 0.481007 1.1:-64257262 MS.gene005491:CDS
CTCAGAGATTGAATTAGGAT+TGG 0.483436 1.1:+64260134 None:intergenic
AACTAAGAAAACAAAGGCTG+TGG 0.487022 1.1:-64260424 MS.gene005491:CDS
GAGGGTAGTGATTGATCCTA+AGG 0.497490 1.1:+64257853 None:intergenic
CTCAGATCCTAACCATCTTA+CGG 0.499569 1.1:-64257725 MS.gene005491:CDS
CGACAACTCTGACCTTTCCA+TGG 0.502830 1.1:+64260380 None:intergenic
AGCTAGCAGCAGAAGGATTG+TGG 0.505422 1.1:-64257932 MS.gene005491:CDS
ACATAGAATTCATTGGGGTC+AGG 0.505645 1.1:+64257642 None:intergenic
TTTCAACTCAACACGGATTG+TGG 0.506381 1.1:-64257677 MS.gene005491:CDS
TACGTTGTTGGACCGTAAGA+TGG 0.520994 1.1:+64257713 None:intergenic
AATGAATTCTATGTCATGGT+TGG 0.521607 1.1:-64257633 MS.gene005491:CDS
TACCAAAGGAGGTTATTTCA+AGG 0.524646 1.1:-64260299 MS.gene005491:CDS
AGCAGCATATGCTCTTCGAT+TGG 0.527953 1.1:-64257263 MS.gene005491:CDS
TTCATAGTGACTCAGTCCTT+AGG 0.533667 1.1:-64257869 MS.gene005491:CDS
TAAAGGGCTTATACAGAGAT+GGG 0.538122 1.1:+64257305 None:intergenic
TTTGATAACTTTGCTTAGTG+AGG 0.543907 1.1:+64257896 None:intergenic
TCCGACGATTGACCTTTCCA+TGG 0.544793 1.1:-64260397 MS.gene005491:CDS
GTAAAGGGCTTATACAGAGA+TGG 0.547882 1.1:+64257304 None:intergenic
TTCAAATGTCATGGTGATGA+TGG 0.550871 1.1:+64257191 None:intergenic
GATCAGTCCATTATCAAAGA+TGG 0.554060 1.1:-64257341 MS.gene005491:CDS
GCTAGCAGCAGAAGGATTGT+GGG 0.554208 1.1:-64257931 MS.gene005491:CDS
CGATTGACCTTTCCATGGAA+AGG 0.558324 1.1:-64260392 MS.gene005491:CDS
TAATAGTGATTCAAATGTCA+TGG 0.559231 1.1:+64257182 None:intergenic
ACTGAATCAATACCTGAACT+TGG 0.561205 1.1:+64260080 None:intergenic
CGTAAGATGGTTAGGATCTG+AGG 0.566286 1.1:+64257726 None:intergenic
CGTGTTGAGTTGAAATCTGA+AGG 0.568746 1.1:+64257685 None:intergenic
ATTCTTGAGCTAGCAGCAGA+AGG 0.570873 1.1:-64257939 MS.gene005491:CDS
CTTCAGATTTCAACTCAACA+CGG 0.572393 1.1:-64257684 MS.gene005491:CDS
CTTATCATGGAAGTTGGAGA+AGG 0.576753 1.1:+64260447 None:intergenic
TAGAATTCATTGGGGTCAGG+AGG 0.581879 1.1:+64257645 None:intergenic
TGCTTAGTGAGGACTTGTCA+GGG 0.582733 1.1:+64257907 None:intergenic
TGTGTAGGAGAAGATATTCA+AGG 0.582909 1.1:+64260157 None:intergenic
CATTGGGGTCAGGAGGGACA+GGG 0.599597 1.1:+64257652 None:intergenic
ACTCTGACCTTTCCATGGAA+AGG 0.602052 1.1:+64260385 None:intergenic
GGACTGATCCACCAATTCAA+CGG 0.607807 1.1:+64257355 None:intergenic
AGAATTCATTGGGGTCAGGA+GGG 0.609175 1.1:+64257646 None:intergenic
ACTAAGAAAACAAAGGCTGT+GGG 0.611470 1.1:-64260423 MS.gene005491:CDS
TCTTCAGAGAAACTTCAAGC+TGG 0.611777 1.1:-64260240 MS.gene005491:CDS
GGTGAATCATGGTGTACCAA+AGG 0.617583 1.1:-64260313 MS.gene005491:CDS
GAATCATGGTGTACCAAAGG+AGG 0.626765 1.1:-64260310 MS.gene005491:CDS
TTAATTTCTTCACCACTGGA+GGG 0.630951 1.1:+64257835 None:intergenic
TCCATGGAAAGGTCAATCGT+CGG 0.635405 1.1:+64260396 None:intergenic
TCTGTATAAGCCCTTTACAT+GGG 0.636711 1.1:-64257299 MS.gene005491:CDS
TAGAAAGCAAGTAACCTGAA+GGG 0.637091 1.1:+64257605 None:intergenic
CCCCAATGAATTCTATGTCA+TGG 0.644997 1.1:-64257637 MS.gene005491:CDS
GATAAGAACTAAGAAAACAA+AGG 0.645933 1.1:-64260430 MS.gene005491:CDS
TTACGGTCCAACAACGTAGG+TGG 0.658172 1.1:-64257708 MS.gene005491:CDS
GATCAATCACTACCCTCCAG+TGG 0.695871 1.1:-64257847 MS.gene005491:CDS
CTGATCCACCAATTCAACGG+TGG 0.709914 1.1:+64257358 None:intergenic
ATCTTACGGTCCAACAACGT+AGG 0.710077 1.1:-64257711 MS.gene005491:CDS
CCATGACATAGAATTCATTG+GGG 0.740303 1.1:+64257637 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATTATTAT+TGG + chr1.1:64259312-64259293 None:intergenic 0.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr1.1:64257796-64257815 None:intergenic 10.0%
!! AATATATGAAGTAATATATA+GGG - chr1.1:64257981-64258000 MS.gene005491:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr1.1:64257797-64257816 None:intergenic 10.0%
!! TAATATATGAAGTAATATAT+AGG - chr1.1:64257980-64257999 MS.gene005491:CDS 10.0%
!!! TATTATTATTATTGGTATTT+TGG + chr1.1:64259867-64259886 None:intergenic 10.0%
!!! TTATTTTTCTTTGTTAATTA+AGG - chr1.1:64258783-64258802 MS.gene005491:intron 10.0%
!! AAACATTGATATTCTATATT+TGG - chr1.1:64258096-64258115 MS.gene005491:intron 15.0%
!! AACATTGATATTCTATATTT+GGG - chr1.1:64258097-64258116 MS.gene005491:intron 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr1.1:64257731-64257750 None:intergenic 15.0%
!! ATAACATAATGATAAAAAGT+GGG - chr1.1:64257898-64257917 MS.gene005491:CDS 15.0%
!! ATAATAAATTCAATTCAATC+AGG - chr1.1:64258821-64258840 MS.gene005491:intron 15.0%
!! ATCTTAAACTTAATTGAATA+TGG - chr1.1:64258869-64258888 MS.gene005491:intron 15.0%
!! GATGATATTTAATGATTTAA+TGG - chr1.1:64259118-64259137 MS.gene005491:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr1.1:64257732-64257751 None:intergenic 15.0%
!! TATAACATAATGATAAAAAG+TGG - chr1.1:64257897-64257916 MS.gene005491:CDS 15.0%
!! TATTGAAATGAAGAAAATAA+AGG + chr1.1:64259475-64259494 None:intergenic 15.0%
!!! AATAATAATACTATTGGTTT+TGG - chr1.1:64259886-64259905 MS.gene005491:intron 15.0%
!! AAAAGTGGAATATATTGAAT+TGG + chr1.1:64257773-64257792 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr1.1:64257772-64257791 None:intergenic 20.0%
!! AAATATCATCATATCTCATT+TGG + chr1.1:64259108-64259127 None:intergenic 20.0%
!! ACAATGAATTGAATTATGAA+TGG + chr1.1:64260076-64260095 None:intergenic 20.0%
!! GAGTTATATCTAATTGTATA+TGG + chr1.1:64259075-64259094 None:intergenic 20.0%
!! GATATTTAATGATTTAATGG+TGG - chr1.1:64259121-64259140 MS.gene005491:intron 20.0%
!! TAACATAATGATAAAAAGTG+GGG - chr1.1:64257899-64257918 MS.gene005491:CDS 20.0%
!! TTATATCTAATTGTATATGG+TGG + chr1.1:64259072-64259091 None:intergenic 20.0%
!!! CATTTTTTATTTCCATATTG+TGG - chr1.1:64258132-64258151 MS.gene005491:intron 20.0%
!!! TAAATTTTTCTGGTATGATT+TGG + chr1.1:64258285-64258304 None:intergenic 20.0%
!!! TATTTGAATCTTTTTAGAAG+AGG + chr1.1:64258740-64258759 None:intergenic 20.0%
!!! TTAACATAATGGATTCATTT+GGG - chr1.1:64258439-64258458 MS.gene005491:intron 20.0%
!!! TTGATTGGTTTAATTTCTTT+GGG + chr1.1:64259354-64259373 None:intergenic 20.0%
!!! TTTGATTGGTTTAATTTCTT+TGG + chr1.1:64259355-64259374 None:intergenic 20.0%
! AACATAATGATAAAAAGTGG+GGG - chr1.1:64257900-64257919 MS.gene005491:CDS 25.0%
! AATAAGATAGTGTTGTATCA+TGG + chr1.1:64259154-64259173 None:intergenic 25.0%
! ATAAATTCAATTCAATCAGG+AGG - chr1.1:64258824-64258843 MS.gene005491:intron 25.0%
! ATAAGATAGTGTTGTATCAT+GGG + chr1.1:64259153-64259172 None:intergenic 25.0%
! ATGAAGTAATATATAGGGTA+GGG - chr1.1:64257986-64258005 MS.gene005491:CDS 25.0%
! ATGATACAACACTATCTTAT+TGG - chr1.1:64259153-64259172 MS.gene005491:intron 25.0%
! ATTGATATTCTATATTTGGG+TGG - chr1.1:64258100-64258119 MS.gene005491:intron 25.0%
! CACAATCAAATCAAGAATAT+AGG - chr1.1:64259444-64259463 MS.gene005491:intron 25.0%
! CACTATTGAATTGAATTGAT+TGG + chr1.1:64259405-64259424 None:intergenic 25.0%
! GAAATTAAGCAACGATAATT+TGG - chr1.1:64259828-64259847 MS.gene005491:intron 25.0%
! GATAAGAACTAAGAAAACAA+AGG - chr1.1:64257218-64257237 MS.gene005491:CDS 25.0%
! GGAAAAAAAATGTTAGTAAC+AGG + chr1.1:64258604-64258623 None:intergenic 25.0%
! TATCTCATTTGGTCTAATAA+TGG + chr1.1:64259097-64259116 None:intergenic 25.0%
! TATGAAGTAATATATAGGGT+AGG - chr1.1:64257985-64258004 MS.gene005491:CDS 25.0%
! TATTGTGGTAACATTTCAAA+AGG - chr1.1:64258147-64258166 MS.gene005491:intron 25.0%
! TGTATAAATAAAGGGAAAAG+TGG + chr1.1:64257788-64257807 None:intergenic 25.0%
!! ATATGCTGCTTGTTTATATT+GGG + chr1.1:64260375-64260394 None:intergenic 25.0%
!! GCATAATTAAGCATTACTTT+TGG - chr1.1:64258991-64259010 MS.gene005491:intron 25.0%
!! TGGTATGATTTGGAATATAA+AGG + chr1.1:64258275-64258294 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + chr1.1:64257685-64257704 None:intergenic 25.0%
!! TTTGAAATGTTACCACAATA+TGG + chr1.1:64258147-64258166 None:intergenic 25.0%
!!! AGAATATGGTTTTTTTAAGG+TGG - chr1.1:64257314-64257333 MS.gene005491:CDS 25.0%
!!! ATGTGTTTTTTCTTTTGTGT+AGG - chr1.1:64260178-64260197 MS.gene005491:CDS 25.0%
!!! CGAAGAATATGGTTTTTTTA+AGG - chr1.1:64257311-64257330 MS.gene005491:CDS 25.0%
!!! GTTAACATAATGGATTCATT+TGG - chr1.1:64258438-64258457 MS.gene005491:intron 25.0%
!!! TATTTTGGGACACTTTTTTT+TGG + chr1.1:64257670-64257689 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + chr1.1:64257684-64257703 None:intergenic 25.0%
!!! TGATTGGTTTAATTTCTTTG+GGG + chr1.1:64259353-64259372 None:intergenic 25.0%
!!! TGGTATTTTGGAATTTTGAT+GGG + chr1.1:64259855-64259874 None:intergenic 25.0%
!!! TGTTTTCTTAGTTCTTATCA+TGG + chr1.1:64257217-64257236 None:intergenic 25.0%
!!! TTAGAAGAGGTATCTATATT+CGG + chr1.1:64258727-64258746 None:intergenic 25.0%
!!! TTGGTATTTTGGAATTTTGA+TGG + chr1.1:64259856-64259875 None:intergenic 25.0%
AAAAATAACCTAGCTCGATA+TGG + chr1.1:64259217-64259236 None:intergenic 30.0%
AAAGTACATCATTGACATTC+TGG + chr1.1:64260264-64260283 None:intergenic 30.0%
AACCATGACATAGAATTCAT+TGG + chr1.1:64260016-64260035 None:intergenic 30.0%
AAGTACATCATTGACATTCT+GGG + chr1.1:64260263-64260282 None:intergenic 30.0%
AATGAATTCTATGTCATGGT+TGG - chr1.1:64260015-64260034 MS.gene005491:intron 30.0%
ACCATGACATAGAATTCATT+GGG + chr1.1:64260015-64260034 None:intergenic 30.0%
ACTATAATAACGCAGATTGA+GGG - chr1.1:64257944-64257963 MS.gene005491:CDS 30.0%
ATTTCAAGGTTGGAAAATGA+AGG - chr1.1:64257363-64257382 MS.gene005491:CDS 30.0%
CCATTATGTTAACATCAGAA+TGG + chr1.1:64258431-64258450 None:intergenic 30.0%
CCATTCTGATGTTAACATAA+TGG - chr1.1:64258428-64258447 MS.gene005491:intron 30.0%
CTGTACATATTACATCAAGA+AGG + chr1.1:64258344-64258363 None:intergenic 30.0%
GATAACAAAAAGAACTGTGA+AGG - chr1.1:64258187-64258206 MS.gene005491:intron 30.0%
TACTATAATAACGCAGATTG+AGG - chr1.1:64257943-64257962 MS.gene005491:CDS 30.0%
TGTGAAAAATCAAACTGACT+CGG - chr1.1:64257822-64257841 MS.gene005491:CDS 30.0%
TTATGCTTGTATCCTAGATA+GGG - chr1.1:64258241-64258260 MS.gene005491:intron 30.0%
TTCTACACCTTTCAATTAGT+TGG - chr1.1:64258402-64258421 MS.gene005491:intron 30.0%
TTGGCATAATATCTTGCATA+TGG - chr1.1:64259235-64259254 MS.gene005491:intron 30.0%
TTTATGCTTGTATCCTAGAT+AGG - chr1.1:64258240-64258259 MS.gene005491:intron 30.0%
! AACACAAACCAATGTGATTT+TGG + chr1.1:64258539-64258558 None:intergenic 30.0%
! AGCCTAATGTCATAAGTTTT+GGG + chr1.1:64258914-64258933 None:intergenic 30.0%
! CATATGCTGCTTGTTTATAT+TGG + chr1.1:64260376-64260395 None:intergenic 30.0%
! CTTATAAGTACTGTTACTTC+TGG + chr1.1:64259023-64259042 None:intergenic 30.0%
! TTAGTTCTTATCATGGAAGT+TGG + chr1.1:64257210-64257229 None:intergenic 30.0%
! TTTGATAACTTTGCTTAGTG+AGG + chr1.1:64259755-64259774 None:intergenic 30.0%
!! ATATCGAGCTAGGTTATTTT+TGG - chr1.1:64259216-64259235 MS.gene005491:intron 30.0%
!! ATGATCTTTTGCTATGGTTT+TGG + chr1.1:64257544-64257563 None:intergenic 30.0%
!! TTGTGTAGGTTTTGACAAAT+GGG - chr1.1:64260192-64260211 MS.gene005491:CDS 30.0%
!! TTTGTGTAGGTTTTGACAAA+TGG - chr1.1:64260191-64260210 MS.gene005491:CDS 30.0%
!!! GGACACTTTTTTTTGGAAAT+AGG + chr1.1:64257663-64257682 None:intergenic 30.0%
!!! TTTTTTAAGGTGGTGAATCA+TGG - chr1.1:64257324-64257343 MS.gene005491:CDS 30.0%
AAAGTAATCCATATCGAGCT+AGG - chr1.1:64259206-64259225 MS.gene005491:intron 35.0%
AACCTTGAAATAACCTCCTT+TGG + chr1.1:64257354-64257373 None:intergenic 35.0%
AACTAAGAAAACAAAGGCTG+TGG - chr1.1:64257224-64257243 MS.gene005491:CDS 35.0%
AAGATCATTCTACCAAGTTC+AGG - chr1.1:64257556-64257575 MS.gene005491:intron 35.0%
AAGGAAAAATGTCCCTATCT+AGG + chr1.1:64258256-64258275 None:intergenic 35.0%
AATATATAGGGTAGGGAACA+AGG - chr1.1:64257993-64258012 MS.gene005491:intron 35.0%
AATTCAATTCAATCAGGAGG+AGG - chr1.1:64258827-64258846 MS.gene005491:intron 35.0%
ACAAAAAGAACTGTGAAGGA+AGG - chr1.1:64258191-64258210 MS.gene005491:intron 35.0%
ACTAAGAAAACAAAGGCTGT+GGG - chr1.1:64257225-64257244 MS.gene005491:CDS 35.0%
ACTGAATCAATACCTGAACT+TGG + chr1.1:64257571-64257590 None:intergenic 35.0%
ATGGTCTCCAACTAATTGAA+AGG + chr1.1:64258412-64258431 None:intergenic 35.0%
CAACGTTGCTAAATATTAGC+CGG + chr1.1:64259537-64259556 None:intergenic 35.0%
CACGCAATGAGTTATTTGAT+TGG + chr1.1:64259369-64259388 None:intergenic 35.0%
CACTTGTACCAAAATCACAT+TGG - chr1.1:64258528-64258547 MS.gene005491:intron 35.0%
CATATTACATCAAGAAGGTG+AGG + chr1.1:64258339-64258358 None:intergenic 35.0%
CCATGACATAGAATTCATTG+GGG + chr1.1:64260014-64260033 None:intergenic 35.0%
CTATAATAACGCAGATTGAG+GGG - chr1.1:64257945-64257964 MS.gene005491:CDS 35.0%
CTCAGAGATTGAATTAGGAT+TGG + chr1.1:64257517-64257536 None:intergenic 35.0%
CTTCAGATTTCAACTCAACA+CGG - chr1.1:64259964-64259983 MS.gene005491:intron 35.0%
GATCAGTCCATTATCAAAGA+TGG - chr1.1:64260307-64260326 MS.gene005491:CDS 35.0%
GATCTCTCAGAGATTGAATT+AGG + chr1.1:64257522-64257541 None:intergenic 35.0%
GGTTATGGCTGCAAAAATAT+TGG - chr1.1:64257447-64257466 MS.gene005491:CDS 35.0%
GTGGTAACATTTCAAAAGGT+TGG - chr1.1:64258151-64258170 MS.gene005491:intron 35.0%
TAAAGGGCTTATACAGAGAT+GGG + chr1.1:64260346-64260365 None:intergenic 35.0%
TACAAACAAAGTCAGAGACA+GGG + chr1.1:64258485-64258504 None:intergenic 35.0%
TAGAAAGCAAGTAACCTGAA+GGG + chr1.1:64260046-64260065 None:intergenic 35.0%
TCTGTATAAGCCCTTTACAT+GGG - chr1.1:64260349-64260368 MS.gene005491:CDS 35.0%
TGCAAAAATATTGGTCCCAA+TGG - chr1.1:64257456-64257475 MS.gene005491:intron 35.0%
TGGAAATAGGTCAGATATTC+CGG + chr1.1:64257650-64257669 None:intergenic 35.0%
TGGTGGTATATGTATCAACT+TGG - chr1.1:64258698-64258717 MS.gene005491:intron 35.0%
TGTGTAGGAGAAGATATTCA+AGG + chr1.1:64257494-64257513 None:intergenic 35.0%
TTAATTTCTTCACCACTGGA+GGG + chr1.1:64259816-64259835 None:intergenic 35.0%
TTAGAAAGCAAGTAACCTGA+AGG + chr1.1:64260047-64260066 None:intergenic 35.0%
TTATATTGGGCCCATGTAAA+GGG + chr1.1:64260362-64260381 None:intergenic 35.0%
TTGCTTAATTTCTTCACCAC+TGG + chr1.1:64259820-64259839 None:intergenic 35.0%
TTTATATTGGGCCCATGTAA+AGG + chr1.1:64260363-64260382 None:intergenic 35.0%
TTTGGTACAAGTGAGGATAA+TGG + chr1.1:64258521-64258540 None:intergenic 35.0%
! AAAGGAGGTTATTTCAAGGT+TGG - chr1.1:64257353-64257372 MS.gene005491:CDS 35.0%
! AGTACTGTTACTTCTGGATA+AGG + chr1.1:64259017-64259036 None:intergenic 35.0%
! CAGCCTAATGTCATAAGTTT+TGG + chr1.1:64258915-64258934 None:intergenic 35.0%
! GCCTAATGTCATAAGTTTTG+GGG + chr1.1:64258913-64258932 None:intergenic 35.0%
! GGTAGAATGATCTTTTGCTA+TGG + chr1.1:64257550-64257569 None:intergenic 35.0%
! TACCAAAGGAGGTTATTTCA+AGG - chr1.1:64257349-64257368 MS.gene005491:CDS 35.0%
! TTGAATTAGGATTGGTGTGT+AGG + chr1.1:64257509-64257528 None:intergenic 35.0%
! TTGTTTTCTCGTGGTTGATT+TGG - chr1.1:64258364-64258383 MS.gene005491:intron 35.0%
! TTTTTGCAGCCATAACCAAA+AGG + chr1.1:64257444-64257463 None:intergenic 35.0%
!! ACTTCTACTCCTTTTGGTTA+TGG - chr1.1:64257432-64257451 MS.gene005491:CDS 35.0%
!! ATGTGATTTTGGTACAAGTG+AGG + chr1.1:64258528-64258547 None:intergenic 35.0%
!! CCTAATGTCATAAGTTTTGG+GGG + chr1.1:64258912-64258931 None:intergenic 35.0%
!! CTTATACAGAGATGGGTTAT+GGG + chr1.1:64260339-64260358 None:intergenic 35.0%
!! TATGTACAGTTGTTTTCTCG+TGG - chr1.1:64258355-64258374 MS.gene005491:intron 35.0%
!!! GGCTATTGTCTTCTTGTTTT+TGG + chr1.1:64260439-64260458 None:intergenic 35.0%
AAAGTGGTGTATACCACGAA+TGG - chr1.1:64258678-64258697 MS.gene005491:intron 40.0%
AAGGTCACCTTTATCACCAT+TGG + chr1.1:64257475-64257494 None:intergenic 40.0%
ACACATGTCACATTTGTGTG+TGG - chr1.1:64258650-64258669 MS.gene005491:intron 40.0%
ACATAGAATTCATTGGGGTC+AGG + chr1.1:64260009-64260028 None:intergenic 40.0%
AGGTCACCTTTATCACCATT+GGG + chr1.1:64257474-64257493 None:intergenic 40.0%
ATTCAATCAGGAGGAGGTAA+CGG - chr1.1:64258833-64258852 MS.gene005491:intron 40.0%
ATTGGTCCCAATGGTGATAA+AGG - chr1.1:64257465-64257484 MS.gene005491:intron 40.0%
CCCCAATGAATTCTATGTCA+TGG - chr1.1:64260011-64260030 MS.gene005491:intron 40.0%
CCCCCAAAACTTATGACATT+AGG - chr1.1:64258909-64258928 MS.gene005491:intron 40.0%
CGATGCAACTGCAAGAAAAT+TGG + chr1.1:64259648-64259667 None:intergenic 40.0%
CTCAGATCCTAACCATCTTA+CGG - chr1.1:64259923-64259942 MS.gene005491:intron 40.0%
CTCTGTATAAGCCCTTTACA+TGG - chr1.1:64260348-64260367 MS.gene005491:CDS 40.0%
CTTAATTTCTTCACCACTGG+AGG + chr1.1:64259817-64259836 None:intergenic 40.0%
CTTATCATGGAAGTTGGAGA+AGG + chr1.1:64257204-64257223 None:intergenic 40.0%
GAGTACCAAGTAAGAGGTTA+CGG - chr1.1:64258571-64258590 MS.gene005491:intron 40.0%
GATACATATACCACCATTCG+TGG + chr1.1:64258694-64258713 None:intergenic 40.0%
GCAACTGCAAGAAAATTGGA+AGG + chr1.1:64259644-64259663 None:intergenic 40.0%
GCTGTCACCATCTTTGATAA+TGG + chr1.1:64260317-64260336 None:intergenic 40.0%
GGAAATAGGTCAGATATTCC+GGG + chr1.1:64257649-64257668 None:intergenic 40.0%
GTAAAGGGCTTATACAGAGA+TGG + chr1.1:64260347-64260366 None:intergenic 40.0%
GTACAAACAAAGTCAGAGAC+AGG + chr1.1:64258486-64258505 None:intergenic 40.0%
GTCGTATAGAACACGATGAT+AGG - chr1.1:64259042-64259061 MS.gene005491:intron 40.0%
GTGAAAGCTTGCGAAGAATA+TGG - chr1.1:64257300-64257319 MS.gene005491:CDS 40.0%
GTGTTTCTTAAGTGTCAAGC+AGG - chr1.1:64258030-64258049 MS.gene005491:intron 40.0%
TCTTCAGAGAAACTTCAAGC+TGG - chr1.1:64257408-64257427 MS.gene005491:CDS 40.0%
TTCATAGTGACTCAGTCCTT+AGG - chr1.1:64259779-64259798 MS.gene005491:intron 40.0%
TTTGTGTGTGGAGGTTAAAG+TGG - chr1.1:64258662-64258681 MS.gene005491:intron 40.0%
! TTTCAACTCAACACGGATTG+TGG - chr1.1:64259971-64259990 MS.gene005491:intron 40.0%
!! ACACATGGCTCTCTAAAGTT+CGG + chr1.1:64258628-64258647 None:intergenic 40.0%
!! CGTGTTGAGTTGAAATCTGA+AGG + chr1.1:64259966-64259985 None:intergenic 40.0%
!! GCTTATACAGAGATGGGTTA+TGG + chr1.1:64260340-64260359 None:intergenic 40.0%
!! TCACAAGAGTACCAAGTAAG+AGG - chr1.1:64258565-64258584 MS.gene005491:intron 40.0%
!! TGTAGGTTTTGACAAATGGG+AGG - chr1.1:64260195-64260214 MS.gene005491:CDS 40.0%
!! TTCTTTGGGGTCAAAGTGAA+TGG + chr1.1:64259340-64259359 None:intergenic 40.0%
ACTCTGACCTTTCCATGGAA+AGG + chr1.1:64257266-64257285 None:intergenic 45.0%
AGAATTCATTGGGGTCAGGA+GGG + chr1.1:64260005-64260024 None:intergenic 45.0%
AGCAGCATATGCTCTTCGAT+TGG - chr1.1:64260385-64260404 MS.gene005491:CDS 45.0%
ATAGGTCAGATATTCCGGGA+CGG + chr1.1:64257645-64257664 None:intergenic 45.0%
ATATAGGGTAGGGAACAAGG+TGG - chr1.1:64257996-64258015 MS.gene005491:intron 45.0%
ATCTTACGGTCCAACAACGT+AGG - chr1.1:64259937-64259956 MS.gene005491:intron 45.0%
ATGTGACATGTGTCCACACA+TGG + chr1.1:64258643-64258662 None:intergenic 45.0%
ATTCTTGAGCTAGCAGCAGA+AGG - chr1.1:64259709-64259728 MS.gene005491:intron 45.0%
CATGGAAAGGTCAGAGTTGT+CGG - chr1.1:64257269-64257288 MS.gene005491:CDS 45.0%
CATGTCACATTTGTGTGTGG+AGG - chr1.1:64258653-64258672 MS.gene005491:intron 45.0%
CGAATCCGTAACCTCTTACT+TGG + chr1.1:64258579-64258598 None:intergenic 45.0%
CGATTGACCTTTCCATGGAA+AGG - chr1.1:64257256-64257275 MS.gene005491:CDS 45.0%
CGTAAGATGGTTAGGATCTG+AGG + chr1.1:64259925-64259944 None:intergenic 45.0%
GAATCATGGTGTACCAAAGG+AGG - chr1.1:64257338-64257357 MS.gene005491:CDS 45.0%
GAGGGTAGTGATTGATCCTA+AGG + chr1.1:64259798-64259817 None:intergenic 45.0%
GCAGCATATGCTCTTCGATT+GGG - chr1.1:64260386-64260405 MS.gene005491:CDS 45.0%
GGACTGATCCACCAATTCAA+CGG + chr1.1:64260296-64260315 None:intergenic 45.0%
GGTGAATCATGGTGTACCAA+AGG - chr1.1:64257335-64257354 MS.gene005491:CDS 45.0%
GTCAGAGTTGTCGGAATTAG+TGG - chr1.1:64257278-64257297 MS.gene005491:CDS 45.0%
TACGTTGTTGGACCGTAAGA+TGG + chr1.1:64259938-64259957 None:intergenic 45.0%
TAGAATTCATTGGGGTCAGG+AGG + chr1.1:64260006-64260025 None:intergenic 45.0%
TCCATGGAAAGGTCAATCGT+CGG + chr1.1:64257255-64257274 None:intergenic 45.0%
TGCTTAGTGAGGACTTGTCA+GGG + chr1.1:64259744-64259763 None:intergenic 45.0%
TGTTGGACCGTAAGATGGTT+AGG + chr1.1:64259933-64259952 None:intergenic 45.0%
TTCAATCAGGAGGAGGTAAC+GGG - chr1.1:64258834-64258853 MS.gene005491:intron 45.0%
TTCTTAAGTGTCAAGCAGGC+TGG - chr1.1:64258034-64258053 MS.gene005491:intron 45.0%
TTGCTTAGTGAGGACTTGTC+AGG + chr1.1:64259745-64259764 None:intergenic 45.0%
! GAACTTTAGAGAGCCATGTG+TGG - chr1.1:64258627-64258646 MS.gene005491:intron 45.0%
! GCTGGTACTTCTACTCCTTT+TGG - chr1.1:64257426-64257445 MS.gene005491:CDS 45.0%
!! ACTGACTCGGATATACGAGA+CGG - chr1.1:64257835-64257854 MS.gene005491:CDS 45.0%
!!! TCATAAGTTTTGGGGGCTGA+TGG + chr1.1:64258905-64258924 None:intergenic 45.0%
!! AATAATAATAATAATACTAT+TGG - chr1.1:64259880-64259899 MS.gene005491:intron 5.0%
!! TAAATCAATATTAAATTAAT+TGG + chr1.1:64257879-64257898 None:intergenic 5.0%
!!! TTAATTAAAATAAATTTTTC+TGG + chr1.1:64258295-64258314 None:intergenic 5.0%
ACGCAGATTGAGGGGACTTT+AGG - chr1.1:64257953-64257972 MS.gene005491:CDS 50.0%
ACTCGGATATACGAGACGGA+GGG - chr1.1:64257839-64257858 MS.gene005491:CDS 50.0%
ACTCGTCAGAGTCTGTACTC+TGG + chr1.1:64258070-64258089 None:intergenic 50.0%
AGCTAGCAGCAGAAGGATTG+TGG - chr1.1:64259716-64259735 MS.gene005491:intron 50.0%
CGACAACTCTGACCTTTCCA+TGG + chr1.1:64257271-64257290 None:intergenic 50.0%
CTGATCCACCAATTCAACGG+TGG + chr1.1:64260293-64260312 None:intergenic 50.0%
GATCAATCACTACCCTCCAG+TGG - chr1.1:64259801-64259820 MS.gene005491:intron 50.0%
GCTAGCAGCAGAAGGATTGT+GGG - chr1.1:64259717-64259736 MS.gene005491:intron 50.0%
GTAATATACTCCCTCCGTCC+CGG - chr1.1:64257628-64257647 MS.gene005491:CDS 50.0%
GTGGTGTATACCACGAATGG+TGG - chr1.1:64258681-64258700 MS.gene005491:intron 50.0%
TAAGTGTCAAGCAGGCTGGT+GGG - chr1.1:64258038-64258057 MS.gene005491:intron 50.0%
TATTAGCCGGCAAAGACACG+TGG + chr1.1:64259524-64259543 None:intergenic 50.0%
TCAATCAGGAGGAGGTAACG+GGG - chr1.1:64258835-64258854 MS.gene005491:intron 50.0%
TCCGACGATTGACCTTTCCA+TGG - chr1.1:64257251-64257270 MS.gene005491:CDS 50.0%
TTAAGTGTCAAGCAGGCTGG+TGG - chr1.1:64258037-64258056 MS.gene005491:intron 50.0%
TTACGGTCCAACAACGTAGG+TGG - chr1.1:64259940-64259959 MS.gene005491:intron 50.0%
TTGCAGCACCACCGTTGAAT+TGG - chr1.1:64260282-64260301 MS.gene005491:CDS 50.0%
!! CATGGCTCTCTAAAGTTCGG+AGG + chr1.1:64258625-64258644 None:intergenic 50.0%
!!! AAGTTTTGGGGGCTGATGGT+TGG + chr1.1:64258901-64258920 None:intergenic 50.0%
AAGTGTCAAGCAGGCTGGTG+GGG - chr1.1:64258039-64258058 MS.gene005491:intron 55.0%
CAGCACCACCGTTGAATTGG+TGG - chr1.1:64260285-64260304 MS.gene005491:CDS 55.0%
CATGGTTGGAGATGCCCTTC+AGG - chr1.1:64260029-64260048 MS.gene005491:intron 55.0%
CTGAAGGCCACCTACGTTGT+TGG + chr1.1:64259950-64259969 None:intergenic 55.0%
GACTCGGATATACGAGACGG+AGG - chr1.1:64257838-64257857 MS.gene005491:CDS 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr1.1:64257641-64257660 None:intergenic 55.0%
TTTGGGGGCTGATGGTTGGT+GGG + chr1.1:64258897-64258916 None:intergenic 55.0%
!! TTTTGGGGGCTGATGGTTGG+TGG + chr1.1:64258898-64258917 None:intergenic 55.0%
AGTGTCAAGCAGGCTGGTGG+GGG - chr1.1:64258040-64258059 MS.gene005491:intron 60.0%
CATTGGGGTCAGGAGGGACA+GGG + chr1.1:64259999-64260018 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr1.1:64257642-64257661 None:intergenic 60.0%
TAGCCGGCAAAGACACGTGG+CGG + chr1.1:64259521-64259540 None:intergenic 60.0%
TCATTGGGGTCAGGAGGGAC+AGG + chr1.1:64260000-64260019 None:intergenic 60.0%
AGCCGGCAAAGACACGTGGC+GGG + chr1.1:64259520-64259539 None:intergenic 65.0%
GACCCGCCACGTGTCTTTGC+CGG - chr1.1:64259515-64259534 MS.gene005491:intron 65.0%
TCAAGCAGGCTGGTGGGGGA+TGG - chr1.1:64258044-64258063 MS.gene005491:intron 65.0%
!! CAGGAGGAGGTAACGGGGAG+TGG - chr1.1:64258840-64258859 MS.gene005491:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 64257192 64260478 64257192 ID=MS.gene005491
chr1.1 mRNA 64257192 64260478 64257192 ID=MS.gene005491.t1;Parent=MS.gene005491
chr1.1 exon 64260093 64260478 64260093 ID=MS.gene005491.t1.exon1;Parent=MS.gene005491.t1
chr1.1 CDS 64260093 64260478 64260093 ID=cds.MS.gene005491.t1;Parent=MS.gene005491.t1
chr1.1 exon 64257620 64258010 64257620 ID=MS.gene005491.t1.exon2;Parent=MS.gene005491.t1
chr1.1 CDS 64257620 64258010 64257620 ID=cds.MS.gene005491.t1;Parent=MS.gene005491.t1
chr1.1 exon 64257192 64257470 64257192 ID=MS.gene005491.t1.exon3;Parent=MS.gene005491.t1
chr1.1 CDS 64257192 64257470 64257192 ID=cds.MS.gene005491.t1;Parent=MS.gene005491.t1
Gene Sequence

>MS.gene005491

ATGGTAGTACCTTCTCCAACTTCCATGATAAGAACTAAGAAAACAAAGGCTGTGGGAATTCCGACGATTGACCTTTCCATGGAAAGGTCAGAGTTGTCGGAATTAGTGGTGAAAGCTTGCGAAGAATATGGTTTTTTTAAGGTGGTGAATCATGGTGTACCAAAGGAGGTTATTTCAAGGTTGGAAAATGAAGGAACAGAGTTTTTCTCAAAAAACTCTTCAGAGAAACTTCAAGCTGGTACTTCTACTCCTTTTGGTTATGGCTGCAAAAATATTGGTCCCAATGGTGATAAAGGTGACCTTGAATATCTTCTCCTACACACCAATCCTAATTCAATCTCTGAGAGATCCAAAACCATAGCAAAAGATCATTCTACCAAGTTCAGGTATTGATTCAGTCACTCATTAATTGTTTAATTAGATAAAATATTTGTCAGTAATATACTCCCTCCGTCCCGGAATATCTGACCTATTTCCAAAAAAAAGTGTCCCAAAATAACTGAGTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACTCTAATTAATACTACTTTCATCATTCCCAATTCAATATATTCCACTTTTCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAATCAAACTGACTCGGATATACGAGACGGAGGGAGTATTAAACATGACCAATTAATTTAATATTGATTTATAACATAATGATAAAAAGTGGGGGAAAAGTATAACATAATGTAATACTATAATAACGCAGATTGAGGGGACTTTAGGATTATAATATATGAAGTAATATATAGGGTAGGGAACAAGGTGGAGTATCAGTTAGTGTTTCTTAAGTGTCAAGCAGGCTGGTGGGGGATGGCCAGAGTACAGACTCTGACGAGTTTGACAAAACATTGATATTCTATATTTGGGTGGTTGATGTATCATTTTTTATTTCCATATTGTGGTAACATTTCAAAAGGTTGGAATGAAAAAAGTTGATAACAAAAAGAACTGTGAAGGAAGGACATAAGTATTTAATATTATCAATGCTTTATGCTTGTATCCTAGATAGGGACATTTTTCCTTTATATTCCAAATCATACCAGAAAAATTTATTTTAATTAATAGTTTAACAAATGCATTTTGCCTCACCTTCTTGATGTAATATGTACAGTTGTTTTCTCGTGGTTGATTTGGCTACGTGACTATGACTTCTACACCTTTCAATTAGTTGGAGACCATTCTGATGTTAACATAATGGATTCATTTGGGCTTCTATTCATGTTGATGAGCCCTGTCTCTGACTTTGTTTGTACAAAACTACATAACCATTATCCTCACTTGTACCAAAATCACATTGGTTTGTGTTGTAACATCACAAGAGTACCAAGTAAGAGGTTACGGATTCGATCCTGTTACTAACATTTTTTTTCCTCCGAACTTTAGAGAGCCATGTGTGGACACATGTCACATTTGTGTGTGGAGGTTAAAGTGGTGTATACCACGAATGGTGGTATATGTATCAACTTGGATACCGAATATAGATACCTCTTCTAAAAAGATTCAAATATTGATTCGTCTTGTTGTGTCAACTTATTTTTCTTTGTTAATTAAGGATTAAGATAAATATAATAATAAATTCAATTCAATCAGGAGGAGGTAACGGGGAGTGGCAATCAATCTTAAACTTAATTGAATATGGAACCCACCAACCATCAGCCCCCAAAACTTATGACATTAGGCTGTAATATGTATGATGCAAGTGCTAGAGAAACTTATCTTCATCAAGAAAAATTATCATGCATAATTAAGCATTACTTTTGGCCTTATCCAGAAGTAACAGTACTTATAAGTCGTATAGAACACGATGATAGGTGATCCACCATATACAATTAGATATAACTCCATTATTAGACCAAATGAGATATGATGATATTTAATGATTTAATGGTGGCACATTCCCATGATACAACACTATCTTATTGGTTATGAGTGAGCTGAAAAAACATATATAGCAAAGTAATCCATATCGAGCTAGGTTATTTTTGGCATAATATCTTGCATATGGATATTTGTTGTGACAGCATGATCTTCATTTTGCTAATTATTATTATTATTATTATTATTTTTATTTTTATAAAGATCTTCCATTCACTTTGACCCCAAAGAAATTAAACCAATCAAATAACTCATTGCGTGTCTCACTCGTGTTCCAATCAATTCAATTCAATAGTGTACTAGTAGTATTCATTAGCACAATCAAATCAAGAATATAGGAAAAACCTTTATTTTCTTCATTTCAATAATTATGAGTTTAAATGATTTGACCCGCCACGTGTCTTTGCCGGCTAATATTTAGCAACGTTGATAATAGAAAAGACGCATTGTTTTCACGAAGATACAAAAATAGTAGTGTTAGTTAATAGTTGTGACTATGTGTAACGTTTTTAGCCTTCCAATTTTCTTGCAGTTGCATCGTCACTGATTATATAGAAGCAGTTAAAGAATTAACGTGTGAGATTCTTGAGCTAGCAGCAGAAGGATTGTGGGTCCCTGACAAGTCCTCACTAAGCAAAGTTATCAAAGACGTTCATAGTGACTCAGTCCTTAGGATCAATCACTACCCTCCAGTGGTGAAGAAATTAAGCAACGATAATTTGGACCCATCAAAATTCCAAAATACCAATAATAATAATAATAATAATACTATTGGTTTTGGAGAGCATTCTGATCCTCAGATCCTAACCATCTTACGGTCCAACAACGTAGGTGGCCTTCAGATTTCAACTCAACACGGATTGTGGATCCCTGTCCCTCCTGACCCCAATGAATTCTATGTCATGGTTGGAGATGCCCTTCAGGTTACTTGCTTTCTAATCAACTCCATTCATAATTCAATTCATTGTACTACTACGATATTTTGTTACACATTAAAGTTTCGACAAAATCACAGTGTCACAATCATTTTTGCATAGTACTTATGTTGTTATGTGTTTTTTCTTTTGTGTAGGTTTTGACAAATGGGAGGTTTGTGAGTGTGAGACATAGAGTATTGACAAACACAACAAAGCCCAGAATGTCAATGATGTACTTTGCAGCACCACCGTTGAATTGGTGGATCAGTCCATTATCAAAGATGGTGACAGCCCATAACCCATCTCTGTATAAGCCCTTTACATGGGCCCAATATAAACAAGCAGCATATGCTCTTCGATTGGGAGATTCACGTCTTGATCAATTCAAGCTCCAAAAACAAGAAGACAATAGCCATCATCACCATGACATTTGA
Protein sequence

>MS.gene005491.t1

MVVPSPTSMIRTKKTKAVGIPTIDLSMERSELSELVVKACEEYGFFKVVNHGVPKEVISRLENEGTEFFSKNSSEKLQAGTSTPFGYGCKNIGPNGDKGDLEYLLLHTNPNSISERSKTIAKDHSTKFSCIVTDYIEAVKELTCEILELAAEGLWVPDKSSLSKVIKDVHSDSVLRINHYPPVVKKLSNDNLDPSKFQNTNNNNNNNTIGFGEHSDPQILTILRSNNVGGLQISTQHGLWIPVPPDPNEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWWISPLSKMVTAHNPSLYKPFTWAQYKQAAYALRLGDSRLDQFKLQKQEDNSHHHHDI