AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063300.t1 MTR_6g088665 98.529 340 5 0 1 340 1 340 0.0 697
MS.gene063300.t1 MTR_6g088665 98.240 341 5 1 1 340 1 341 0.0 693
MS.gene063300.t1 MTR_8g102600 73.669 338 78 2 1 338 1 327 0.0 528
MS.gene063300.t1 MTR_8g102600 77.419 279 61 1 60 338 1 277 3.98e-165 461
MS.gene063300.t1 MTR_4g100600 47.896 309 152 3 21 329 9 308 1.28e-106 315
MS.gene063300.t1 MTR_4g100590 46.557 305 149 4 21 325 9 299 3.70e-101 300
MS.gene063300.t1 MTR_4g100590 46.241 266 129 4 60 325 1 252 1.28e-84 257
MS.gene063300.t1 MTR_4g100600 46.087 230 115 3 21 250 9 229 8.06e-66 207
MS.gene063300.t1 MTR_4g087090 31.515 330 193 10 23 335 32 345 3.55e-38 139
MS.gene063300.t1 MTR_1g034060 31.111 315 200 9 25 334 40 342 8.25e-38 138
MS.gene063300.t1 MTR_1g034120 31.429 315 199 9 25 334 40 342 8.43e-38 138
MS.gene063300.t1 MTR_4g087110 31.646 316 191 11 29 334 40 340 2.37e-36 134
MS.gene063300.t1 MTR_4g087100 31.090 312 179 9 31 328 45 334 6.90e-36 133
MS.gene063300.t1 MTR_4g087120 30.462 325 196 12 23 333 28 336 8.91e-34 127
MS.gene063300.t1 MTR_5g065010 33.000 300 170 9 27 321 50 323 2.34e-33 126
MS.gene063300.t1 MTR_1g034140 29.483 329 208 9 4 324 10 322 5.00e-33 125
MS.gene063300.t1 MTR_3g092890 31.633 294 176 11 7 297 23 294 2.73e-32 123
MS.gene063300.t1 MTR_4g087140 31.046 306 180 11 31 324 45 331 4.13e-32 123
MS.gene063300.t1 MTR_3g070860 30.793 328 187 13 8 320 35 337 6.56e-32 122
MS.gene063300.t1 MTR_8g074050 31.046 306 181 14 20 320 54 334 2.16e-31 121
MS.gene063300.t1 MTR_5g082750 30.293 307 187 11 20 320 51 336 8.39e-31 120
MS.gene063300.t1 MTR_4g100610 35.470 234 103 7 21 230 9 218 9.10e-31 116
MS.gene063300.t1 MTR_8g030880 28.125 320 187 10 21 327 10 299 1.63e-30 118
MS.gene063300.t1 MTR_4g074130 29.682 283 167 9 20 297 42 297 1.69e-29 116
MS.gene063300.t1 MTR_7g077670 28.622 283 182 6 46 327 36 299 1.31e-28 113
MS.gene063300.t1 MTR_1g011580 30.945 307 178 12 19 321 61 337 5.29e-28 112
MS.gene063300.t1 MTR_7g062570 28.659 328 196 11 16 332 53 353 7.89e-28 111
MS.gene063300.t1 MTR_2g069010 27.152 302 187 7 32 325 85 361 8.24e-28 112
MS.gene063300.t1 MTR_2g437380 30.573 314 180 13 6 312 46 328 8.25e-28 112
MS.gene063300.t1 MTR_8g074070 30.744 309 184 14 20 321 54 339 8.99e-28 111
MS.gene063300.t1 MTR_7g102820 28.435 313 181 6 17 312 66 352 1.32e-27 111
MS.gene063300.t1 MTR_8g009160 27.961 304 189 9 24 322 68 346 1.77e-27 110
MS.gene063300.t1 MTR_4g015790 29.667 300 170 12 33 320 80 350 2.33e-27 110
MS.gene063300.t1 MTR_1g062110 29.412 306 181 6 17 312 65 345 2.39e-27 110
MS.gene063300.t1 MTR_8g024120 27.036 307 201 7 21 326 45 329 2.68e-27 110
MS.gene063300.t1 MTR_1g070120 30.968 310 184 9 23 326 40 325 8.17e-27 108
MS.gene063300.t1 MTR_8g009080 29.352 293 176 10 35 322 113 379 1.18e-26 109
MS.gene063300.t1 MTR_8g009170 27.848 316 199 10 21 331 65 356 1.19e-26 108
MS.gene063300.t1 MTR_5g059130 30.061 326 201 9 7 326 28 332 1.33e-26 108
MS.gene063300.t1 MTR_3g072810 30.844 308 187 10 23 326 42 327 1.54e-26 107
MS.gene063300.t1 MTR_2g083030 26.984 315 185 11 21 328 42 318 1.56e-26 107
MS.gene063300.t1 MTR_3g083370 29.909 331 182 13 18 338 4 294 1.64e-26 107
MS.gene063300.t1 MTR_2g102570 29.179 329 183 13 12 324 43 337 3.14e-26 107
MS.gene063300.t1 MTR_3g088745 28.659 328 211 8 6 331 32 338 3.57e-26 107
MS.gene063300.t1 MTR_7g062580 28.354 328 197 12 16 332 53 353 3.88e-26 107
MS.gene063300.t1 MTR_8g093930 26.667 300 194 7 37 331 69 347 5.70e-26 106
MS.gene063300.t1 MTR_2g025120 28.254 315 181 10 18 321 4 284 5.79e-26 105
MS.gene063300.t1 MTR_7g451860 27.492 331 189 14 11 329 34 325 7.61e-26 105
MS.gene063300.t1 MTR_7g047670 27.492 331 189 14 11 329 34 325 7.61e-26 105
MS.gene063300.t1 MTR_3g063180 29.193 322 199 12 13 325 36 337 9.89e-26 105
MS.gene063300.t1 MTR_5g055680 28.793 323 184 11 12 320 38 328 1.35e-25 105
MS.gene063300.t1 MTR_5g032880 28.788 330 193 11 12 326 367 669 1.49e-25 107
MS.gene063300.t1 MTR_5g032880 27.961 304 197 7 23 325 40 322 1.51e-23 102
MS.gene063300.t1 MTR_5g005570 29.154 319 179 12 21 329 37 318 1.91e-25 104
MS.gene063300.t1 MTR_7g068650 30.189 318 186 14 14 320 50 342 2.13e-25 105
MS.gene063300.t1 MTR_2g072890 29.553 291 179 12 38 325 73 340 2.29e-25 105
MS.gene063300.t1 MTR_3g117485 28.710 310 191 12 16 320 50 334 3.65e-25 104
MS.gene063300.t1 MTR_0032s0040 27.645 293 181 8 4 289 51 319 5.29e-25 104
MS.gene063300.t1 MTR_2g068950 27.243 301 186 8 32 324 79 354 6.35e-25 103
MS.gene063300.t1 MTR_4g093840 28.803 309 191 9 23 327 70 353 7.24e-25 103
MS.gene063300.t1 MTR_8g075890 30.108 279 172 8 21 297 44 301 8.98e-25 103
MS.gene063300.t1 MTR_8g028435 27.742 310 192 9 20 322 62 346 9.05e-25 103
MS.gene063300.t1 MTR_5g055900 28.481 316 194 11 12 320 38 328 1.12e-24 103
MS.gene063300.t1 MTR_7g062600 29.878 328 185 13 26 338 59 356 1.28e-24 103
MS.gene063300.t1 MTR_2g068960 27.243 301 186 8 32 324 79 354 1.34e-24 103
MS.gene063300.t1 MTR_7g062550 28.571 336 198 11 16 338 58 364 1.42e-24 103
MS.gene063300.t1 MTR_1g033810 30.717 293 163 10 38 320 68 330 1.43e-24 102
MS.gene063300.t1 MTR_3g088565 30.032 313 177 11 23 322 5 288 1.48e-24 102
MS.gene063300.t1 MTR_1g081840 30.519 308 184 11 32 331 70 355 1.55e-24 103
MS.gene063300.t1 MTR_1g102070 26.902 368 216 12 1 333 14 363 1.55e-24 103
MS.gene063300.t1 MTR_8g009090 27.869 305 188 9 24 322 68 346 2.02e-24 102
MS.gene063300.t1 MTR_1g093110 26.935 323 201 9 13 325 62 359 2.43e-24 102
MS.gene063300.t1 MTR_6g015950 30.225 311 177 11 12 312 31 311 2.56e-24 101
MS.gene063300.t1 MTR_1g070135 28.529 340 205 10 11 336 23 338 2.68e-24 101
MS.gene063300.t1 MTR_5g022020 28.990 307 193 11 24 327 47 331 2.72e-24 102
MS.gene063300.t1 MTR_8g062600 25.767 326 203 8 12 323 56 356 2.73e-24 102
MS.gene063300.t1 MTR_1g070080 27.414 321 205 9 20 337 40 335 3.02e-24 101
MS.gene063300.t1 MTR_5g032870 27.302 315 194 7 21 326 43 331 4.29e-24 101
MS.gene063300.t1 MTR_8g009110 28.289 304 189 10 24 322 68 347 5.47e-24 101
MS.gene063300.t1 MTR_2g072910 28.283 297 175 11 38 325 72 339 6.55e-24 100
MS.gene063300.t1 MTR_1g070085 28.182 330 200 11 20 339 39 341 8.26e-24 100
MS.gene063300.t1 MTR_1g070085 28.182 330 200 11 20 339 39 341 8.26e-24 100
MS.gene063300.t1 MTR_3g072820 28.754 313 188 8 23 326 44 330 2.28e-23 99.0
MS.gene063300.t1 MTR_4g087130 27.273 319 210 9 25 339 38 338 2.30e-23 99.4
MS.gene063300.t1 MTR_7g081710 29.206 315 193 11 12 321 43 332 3.43e-23 99.0
MS.gene063300.t1 MTR_5g085330 29.305 331 188 15 18 338 5 299 3.46e-23 98.2
MS.gene063300.t1 MTR_3g058610 28.283 297 184 10 36 327 59 331 4.79e-23 98.6
MS.gene063300.t1 MTR_3g096500 28.859 298 190 9 23 313 68 350 6.90e-23 98.6
MS.gene063300.t1 MTR_2g070870 29.688 320 195 12 19 334 26 319 7.43e-23 97.4
MS.gene063300.t1 MTR_8g074070 30.744 309 165 16 20 321 54 320 1.09e-22 97.4
MS.gene063300.t1 MTR_5g048550 26.962 293 186 11 38 326 66 334 1.10e-22 97.4
MS.gene063300.t1 MTR_3g040410 28.247 308 181 10 30 329 22 297 1.13e-22 97.1
MS.gene063300.t1 MTR_1g048940 26.019 319 195 8 16 321 40 330 1.15e-22 97.4
MS.gene063300.t1 MTR_0009s0480 27.848 316 200 11 12 322 37 329 1.68e-22 97.1
MS.gene063300.t1 MTR_2g083000 28.834 326 188 13 10 327 23 312 1.92e-22 96.3
MS.gene063300.t1 MTR_2g068840 28.754 313 196 11 24 329 58 350 2.05e-22 97.1
MS.gene063300.t1 MTR_0328s0030 27.875 287 181 10 38 321 64 327 2.14e-22 96.7
MS.gene063300.t1 MTR_8g461330 29.180 305 159 11 23 300 29 303 2.16e-22 96.3
MS.gene063300.t1 MTR_2g019370 27.301 326 195 8 23 334 30 327 2.17e-22 96.3
MS.gene063300.t1 MTR_1g032140 27.273 319 180 8 24 326 69 351 2.64e-22 96.7
MS.gene063300.t1 MTR_7g016090 27.986 293 187 11 23 313 43 313 2.73e-22 96.3
MS.gene063300.t1 MTR_8g075830 28.731 268 166 9 33 297 56 301 2.75e-22 96.7
MS.gene063300.t1 MTR_7g016090 27.333 300 194 11 16 313 34 311 2.91e-22 95.9
MS.gene063300.t1 MTR_7g029655 26.437 348 207 13 11 339 55 372 3.34e-22 96.3
MS.gene063300.t1 MTR_5g055690 26.875 320 197 11 12 321 38 330 3.49e-22 96.3
MS.gene063300.t1 MTR_2g069060 27.181 298 186 11 32 325 65 335 4.50e-22 95.9
MS.gene063300.t1 MTR_1g032250 28.339 307 190 8 24 325 76 357 5.90e-22 95.9
MS.gene063300.t1 MTR_0009s0050 27.358 318 195 11 12 320 38 328 6.60e-22 95.5
MS.gene063300.t1 MTR_0009s0050 27.358 318 195 11 12 320 38 328 7.42e-22 95.1
MS.gene063300.t1 MTR_3g117420 28.428 299 190 10 20 315 54 331 7.50e-22 95.1
MS.gene063300.t1 MTR_8g008930 27.541 305 190 11 24 322 68 347 9.01e-22 95.1
MS.gene063300.t1 MTR_6g464620 29.167 288 176 10 33 313 82 348 1.19e-21 95.1
MS.gene063300.t1 MTR_5g055820 26.807 332 205 13 12 333 38 341 1.41e-21 94.4
MS.gene063300.t1 MTR_8g009120 28.065 310 180 9 20 322 62 335 1.69e-21 94.4
MS.gene063300.t1 MTR_1g093140 25.552 317 196 10 23 326 75 364 1.82e-21 94.4
MS.gene063300.t1 MTR_4g024660 26.198 313 194 7 23 323 69 356 1.89e-21 94.4
MS.gene063300.t1 MTR_3g091350 28.963 328 198 14 21 339 64 365 2.11e-21 94.0
MS.gene063300.t1 MTR_4g094900 31.224 237 125 9 18 232 5 225 2.17e-21 92.0
MS.gene063300.t1 MTR_5g048570 27.273 319 200 12 11 320 31 326 3.19e-21 93.2
MS.gene063300.t1 MTR_8g064200 28.179 291 171 10 40 321 79 340 4.29e-21 93.2
MS.gene063300.t1 MTR_4g116010 29.670 273 165 11 23 291 52 301 4.36e-21 92.8
MS.gene063300.t1 MTR_8g064200 28.179 291 171 10 40 321 74 335 4.40e-21 93.2
MS.gene063300.t1 MTR_2g069190 26.586 331 201 10 3 322 54 353 9.76e-21 92.4
MS.gene063300.t1 MTR_4g117880 28.247 308 190 10 20 320 62 345 9.95e-21 92.0
MS.gene063300.t1 MTR_3g117485 28.261 276 168 12 50 320 12 262 1.30e-20 90.5
MS.gene063300.t1 MTR_7g016080 27.244 312 183 11 23 326 43 318 1.76e-20 90.9
MS.gene063300.t1 MTR_2g069090 26.235 324 188 11 20 325 67 357 1.80e-20 91.7
MS.gene063300.t1 MTR_3g043900 25.000 328 199 9 13 329 51 342 2.42e-20 90.9
MS.gene063300.t1 MTR_4g123020 25.309 324 206 8 20 334 19 315 4.41e-20 89.7
MS.gene063300.t1 MTR_7g102720 25.552 317 195 8 23 329 39 324 6.70e-20 89.4
MS.gene063300.t1 MTR_8g033380 28.620 297 169 12 31 313 70 337 6.91e-20 89.7
MS.gene063300.t1 MTR_5g048470 27.273 286 184 9 38 321 73 336 7.48e-20 89.7
MS.gene063300.t1 MTR_8g469400 28.213 319 185 13 21 323 53 343 8.24e-20 89.4
MS.gene063300.t1 MTR_2g437380 30.000 260 149 12 60 312 1 234 8.83e-20 87.8
MS.gene063300.t1 MTR_8g093980 23.810 294 206 5 21 313 64 340 1.08e-19 89.4
MS.gene063300.t1 MTR_7g056347 27.554 323 175 12 23 322 69 355 1.38e-19 89.0
MS.gene063300.t1 MTR_1g032220 27.362 307 193 8 24 325 76 357 1.40e-19 89.0
MS.gene063300.t1 MTR_3g026150 30.662 287 169 15 11 292 52 313 2.41e-19 88.2
MS.gene063300.t1 MTR_5g048850 27.972 286 180 12 40 322 68 330 2.93e-19 87.8
MS.gene063300.t1 MTR_2g069210 26.518 313 194 11 20 322 63 349 3.82e-19 87.8
MS.gene063300.t1 MTR_1g093120 25.466 322 201 10 16 326 63 356 4.40e-19 87.4
MS.gene063300.t1 MTR_5g048740 27.778 324 191 13 12 322 36 329 5.43e-19 87.0
MS.gene063300.t1 MTR_1g070110 37.324 142 80 3 189 326 84 220 6.19e-19 85.1
MS.gene063300.t1 MTR_1g070085 29.817 218 138 7 128 339 55 263 7.53e-19 85.1
MS.gene063300.t1 MTR_2g069300 26.433 314 194 12 20 322 53 340 7.61e-19 86.7
MS.gene063300.t1 MTR_2g069020 27.152 302 188 9 32 327 83 358 8.22e-19 86.7
MS.gene063300.t1 MTR_2g069020 27.152 302 188 9 32 327 83 358 1.36e-18 86.3
MS.gene063300.t1 MTR_8g041620 26.280 293 186 6 38 325 92 359 1.53e-18 85.9
MS.gene063300.t1 MTR_1g070100 29.907 214 137 7 128 338 51 254 1.56e-18 84.3
MS.gene063300.t1 MTR_1g070185 27.241 290 183 9 35 322 86 349 1.73e-18 85.9
MS.gene063300.t1 MTR_7g063730 28.107 338 197 14 3 326 46 351 2.40e-18 85.5
MS.gene063300.t1 MTR_5g059140 26.984 315 195 7 7 310 26 316 2.42e-18 85.1
MS.gene063300.t1 MTR_8g041600 27.551 294 181 8 38 325 92 359 2.93e-18 85.1
MS.gene063300.t1 MTR_8g009080 27.468 233 142 8 35 266 113 319 4.42e-18 84.0
MS.gene063300.t1 MTR_5g011250 26.855 283 180 9 38 314 70 331 4.92e-18 84.3
MS.gene063300.t1 MTR_4g021380 26.625 323 212 11 7 326 4 304 7.14e-18 83.6
MS.gene063300.t1 MTR_4g011720 25.962 312 191 9 18 321 14 293 7.89e-18 83.2
MS.gene063300.t1 MTR_7g105070 26.349 315 187 9 23 325 61 342 8.09e-18 84.0
MS.gene063300.t1 MTR_5g027230 28.716 296 166 11 38 324 23 282 1.09e-17 82.8
MS.gene063300.t1 MTR_3g045230 35.484 124 74 3 208 329 224 343 1.78e-17 82.8
MS.gene063300.t1 MTR_8g009170 26.860 242 152 8 21 261 65 282 2.25e-17 81.6
MS.gene063300.t1 MTR_7g045650 30.502 259 150 12 20 274 62 294 2.86e-17 81.6
MS.gene063300.t1 MTR_3g091360 28.070 285 176 10 11 294 53 309 3.79e-17 81.6
MS.gene063300.t1 MTR_1g043775 28.660 321 186 14 3 312 41 329 4.68e-17 81.6
MS.gene063300.t1 MTR_2g033270 26.994 326 194 13 21 332 19 314 5.93e-17 80.9
MS.gene063300.t1 MTR_4g132770 39.200 125 64 5 201 321 39 155 9.57e-17 77.0
MS.gene063300.t1 MTR_3g464530 26.937 271 160 12 38 298 47 289 1.07e-16 80.1
MS.gene063300.t1 MTR_8g009080 27.556 225 136 8 35 258 113 311 1.24e-16 80.1
MS.gene063300.t1 MTR_1g043810 27.358 318 192 11 5 312 41 329 1.82e-16 79.7
MS.gene063300.t1 MTR_4g021360 25.862 290 193 9 38 325 31 300 2.33e-16 79.0
MS.gene063300.t1 MTR_8g063070 24.715 263 172 9 33 294 84 321 2.55e-16 79.3
MS.gene063300.t1 MTR_4g115990 27.961 304 171 13 39 335 59 321 3.74e-16 78.6
MS.gene063300.t1 MTR_3g083370 29.249 253 136 10 18 261 4 222 4.26e-16 76.6
MS.gene063300.t1 MTR_7g078010 26.239 343 192 12 8 327 56 360 7.12e-16 78.2
MS.gene063300.t1 MTR_1g043760 26.087 322 195 10 4 312 37 328 7.19e-16 78.2
MS.gene063300.t1 MTR_6g092620 26.871 294 166 11 23 301 5 264 1.43e-15 76.6
MS.gene063300.t1 MTR_5g024940 27.419 310 171 9 24 329 9 268 2.01e-15 75.9
MS.gene063300.t1 MTR_0009s0050 30.151 199 120 6 128 320 45 230 2.28e-15 75.1
MS.gene063300.t1 MTR_0009s0050 30.151 199 120 6 128 320 45 230 2.30e-15 75.5
MS.gene063300.t1 MTR_2g069060 25.564 266 164 10 3 261 9 247 2.39e-15 75.1
MS.gene063300.t1 MTR_2g025120 26.877 253 142 8 18 261 4 222 2.40e-15 74.7
MS.gene063300.t1 MTR_7g062560 25.220 341 193 12 3 326 44 339 2.57e-15 76.3
MS.gene063300.t1 MTR_5g025050 28.364 275 160 10 20 289 4 246 2.77e-15 75.9
MS.gene063300.t1 MTR_8g006930 25.444 338 208 10 2 325 51 358 2.80e-15 76.3
MS.gene063300.t1 MTR_7g056393 27.647 340 185 15 9 325 57 358 3.96e-15 75.9
MS.gene063300.t1 MTR_1g043770 27.609 297 158 14 14 292 47 304 7.09e-15 75.1
MS.gene063300.t1 MTR_0009s0050 36.975 119 68 3 204 320 35 148 8.93e-15 72.0
MS.gene063300.t1 MTR_3g108520 25.387 323 215 12 7 326 4 303 9.26e-15 74.3
MS.gene063300.t1 MTR_8g009180 29.187 209 116 8 136 322 78 276 1.25e-14 73.6
MS.gene063300.t1 MTR_0056s0160 28.293 205 128 7 128 326 28 219 1.72e-14 72.4
MS.gene063300.t1 MTR_7g056353 30.808 198 120 6 136 325 144 332 2.36e-14 74.3
MS.gene063300.t1 MTR_0009s0480 27.953 254 156 10 12 261 37 267 2.61e-14 72.4
MS.gene063300.t1 MTR_4g119410 28.125 320 186 11 20 325 69 358 3.28e-14 73.2
MS.gene063300.t1 MTR_0009s0400 35.593 118 69 3 206 321 13 125 8.15e-14 68.6
MS.gene063300.t1 MTR_2g072910 29.310 232 127 10 38 261 72 274 8.35e-14 71.2
MS.gene063300.t1 MTR_2g068800 25.969 258 148 8 24 276 58 277 1.71e-13 70.1
MS.gene063300.t1 MTR_3g026150 28.409 264 163 12 66 326 4 244 3.48e-13 68.9
MS.gene063300.t1 MTR_8g041600 27.111 225 137 6 38 261 92 290 6.49e-13 68.9
MS.gene063300.t1 MTR_1g027290 24.415 299 188 9 34 321 48 319 1.22e-12 68.2
MS.gene063300.t1 MTR_5g048850 27.193 228 133 10 40 261 68 268 2.80e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063300.t1 AT1G35190 72.360 322 88 1 17 338 8 328 8.45e-176 491
MS.gene063300.t1 AT1G35190 68.944 322 76 2 17 338 8 305 2.26e-167 468
MS.gene063300.t1 AT3G46490 66.361 327 108 2 7 333 4 328 7.72e-165 463
MS.gene063300.t1 AT3G46500 61.721 337 117 4 1 337 1 325 6.21e-161 453
MS.gene063300.t1 AT3G46490 66.078 283 94 2 7 289 4 284 5.65e-139 397
MS.gene063300.t1 AT3G46480 57.864 337 90 4 1 337 1 285 4.19e-134 383
MS.gene063300.t1 AT3G46500 59.107 291 107 4 1 291 1 279 1.38e-128 370
MS.gene063300.t1 AT3G46500 63.320 259 87 3 79 337 1 251 2.82e-128 367
MS.gene063300.t1 AT3G46500 63.320 259 87 3 79 337 1 251 2.82e-128 367
MS.gene063300.t1 AT3G46500 58.301 259 76 3 79 337 1 227 7.45e-113 327
MS.gene063300.t1 AT3G46500 67.368 190 61 1 148 337 1 189 1.45e-99 292
MS.gene063300.t1 AT3G46500 60.094 213 77 3 79 291 1 205 5.77e-96 284
MS.gene063300.t1 AT4G16765 50.000 252 119 2 79 330 1 245 8.63e-87 261
MS.gene063300.t1 AT4G16765 50.000 252 119 2 79 330 1 245 8.63e-87 261
MS.gene063300.t1 AT4G16765 50.000 252 119 2 79 330 1 245 8.63e-87 261
MS.gene063300.t1 AT3G46500 59.162 191 70 3 79 269 1 183 3.14e-83 250
MS.gene063300.t1 AT4G16765 50.427 234 109 2 79 312 1 227 1.11e-79 243
MS.gene063300.t1 AT3G46500 64.138 145 51 1 147 291 31 174 7.64e-68 211
MS.gene063300.t1 AT3G46500 64.138 145 51 1 147 291 31 174 7.64e-68 211
MS.gene063300.t1 AT4G16770 44.118 238 120 3 21 255 22 249 1.49e-65 207
MS.gene063300.t1 AT4G16765 48.691 191 91 2 79 269 1 184 4.82e-58 186
MS.gene063300.t1 AT4G16765 57.258 124 53 0 207 330 76 199 1.56e-52 172
MS.gene063300.t1 AT3G50210 34.056 323 167 13 16 313 3 304 1.77e-42 150
MS.gene063300.t1 AT3G50210 34.056 323 167 13 16 313 3 304 1.77e-42 150
MS.gene063300.t1 AT3G50210 34.056 323 167 13 16 313 3 304 1.77e-42 150
MS.gene063300.t1 AT3G49630 34.122 296 161 11 28 313 25 296 1.25e-39 142
MS.gene063300.t1 AT3G49630 33.333 318 165 12 19 313 7 300 1.27e-39 142
MS.gene063300.t1 AT3G49620 31.715 309 169 11 19 304 32 321 2.88e-37 137
MS.gene063300.t1 AT3G19010 32.468 308 181 11 15 312 25 315 1.62e-34 129
MS.gene063300.t1 AT3G19010 32.468 308 181 11 15 312 25 315 1.62e-34 129
MS.gene063300.t1 AT5G24530 31.081 296 171 12 11 297 22 293 1.26e-32 124
MS.gene063300.t1 AT5G05600 32.168 286 170 10 38 320 85 349 5.21e-32 123
MS.gene063300.t1 AT3G11180 32.639 288 166 12 38 320 114 378 2.92e-30 119
MS.gene063300.t1 AT3G11180 32.639 288 166 12 38 320 114 378 3.24e-30 119
MS.gene063300.t1 AT4G21200 28.221 326 189 12 6 328 38 321 4.22e-29 115
MS.gene063300.t1 AT3G21420 32.890 301 171 13 20 312 57 334 1.01e-28 114
MS.gene063300.t1 AT4G25420 31.119 286 166 9 23 297 63 328 2.86e-28 113
MS.gene063300.t1 AT5G08640 29.102 323 188 9 21 331 43 336 2.94e-28 112
MS.gene063300.t1 AT5G08640 29.102 323 188 9 21 331 43 336 2.94e-28 112
MS.gene063300.t1 AT3G19010 30.195 308 158 12 15 312 25 285 5.09e-28 111
MS.gene063300.t1 AT3G13610 29.582 311 191 13 23 329 64 350 6.58e-28 112
MS.gene063300.t1 AT2G38240 29.932 294 181 10 33 322 61 333 1.10e-27 111
MS.gene063300.t1 AT2G36690 30.263 304 176 8 17 312 60 335 1.94e-27 110
MS.gene063300.t1 AT2G36690 30.263 304 176 8 17 312 60 335 1.94e-27 110
MS.gene063300.t1 AT1G12010 30.968 310 178 12 17 321 6 284 2.72e-27 109
MS.gene063300.t1 AT1G05010 31.348 319 170 12 18 321 4 288 7.08e-27 108
MS.gene063300.t1 AT5G51810 29.682 283 172 9 23 298 65 327 3.11e-26 107
MS.gene063300.t1 AT1G78550 29.333 300 179 12 1 297 44 313 3.64e-26 107
MS.gene063300.t1 AT4G25300 31.461 267 154 12 27 288 62 304 7.21e-26 106
MS.gene063300.t1 AT1G17020 32.453 265 155 11 27 288 63 306 7.88e-26 106
MS.gene063300.t1 AT3G50210 37.173 191 104 8 127 313 44 222 1.02e-25 103
MS.gene063300.t1 AT3G55970 30.986 284 172 10 33 312 70 333 1.39e-25 105
MS.gene063300.t1 AT5G63600 29.605 304 187 5 23 324 35 313 1.62e-25 105
MS.gene063300.t1 AT1G30040 29.167 336 211 10 8 338 19 332 8.51e-25 103
MS.gene063300.t1 AT1G80340 26.769 325 201 12 21 336 50 346 1.26e-24 102
MS.gene063300.t1 AT4G10490 28.808 302 174 10 11 297 25 300 1.31e-24 102
MS.gene063300.t1 AT4G23340 27.987 318 189 9 21 327 10 298 1.44e-24 102
MS.gene063300.t1 AT1G62380 29.206 315 177 12 17 321 6 284 1.64e-24 102
MS.gene063300.t1 AT1G78440 28.228 333 207 12 11 334 7 316 1.69e-24 102
MS.gene063300.t1 AT5G20400 30.201 298 183 11 21 315 50 325 1.77e-24 102
MS.gene063300.t1 AT5G63600 29.508 305 187 6 23 324 35 314 1.97e-24 102
MS.gene063300.t1 AT5G43935 28.289 304 178 9 23 324 21 286 2.57e-24 100
MS.gene063300.t1 AT1G17010 28.135 327 198 11 7 322 40 340 3.63e-24 101
MS.gene063300.t1 AT3G19000 30.389 283 173 10 38 312 54 320 3.98e-24 101
MS.gene063300.t1 AT1G55290 28.155 309 198 9 23 329 64 350 6.99e-24 100
MS.gene063300.t1 AT3G49630 31.301 246 137 10 76 313 6 227 2.24e-23 97.8
MS.gene063300.t1 AT1G15550 26.567 335 211 10 13 339 49 356 2.39e-23 99.4
MS.gene063300.t1 AT4G21690 26.380 326 202 11 23 336 49 348 4.44e-23 98.6
MS.gene063300.t1 AT5G54000 30.263 304 185 11 17 315 45 326 8.53e-23 97.8
MS.gene063300.t1 AT1G06640 25.676 296 188 9 33 322 82 351 2.76e-22 96.7
MS.gene063300.t1 AT5G58660 25.965 285 170 7 37 298 46 312 3.85e-22 95.9
MS.gene063300.t1 AT4G10500 27.273 286 171 7 20 297 46 302 4.31e-22 95.9
MS.gene063300.t1 AT1G77330 27.844 334 186 13 20 338 5 298 9.49e-22 94.4
MS.gene063300.t1 AT1G49390 29.964 277 169 11 21 294 50 304 9.64e-22 94.7
MS.gene063300.t1 AT3G47190 27.458 295 176 7 38 323 45 310 1.03e-21 94.4
MS.gene063300.t1 AT5G43450 26.959 319 197 9 15 322 51 344 1.25e-21 94.7
MS.gene063300.t1 AT5G59530 27.036 307 186 10 24 320 66 344 1.38e-21 94.7
MS.gene063300.t1 AT5G20550 30.389 283 169 13 38 315 67 326 2.36e-21 93.6
MS.gene063300.t1 AT1G78550 29.297 256 155 11 45 297 3 235 3.84e-21 92.0
MS.gene063300.t1 AT1G60980 26.882 279 171 7 31 298 73 329 5.08e-21 93.2
MS.gene063300.t1 AT5G54000 30.597 268 161 10 51 315 1 246 8.98e-21 90.9
MS.gene063300.t1 AT3G12900 27.097 310 199 10 24 329 59 345 1.12e-20 92.0
MS.gene063300.t1 AT1G80330 26.984 315 191 15 23 325 51 338 1.16e-20 92.0
MS.gene063300.t1 AT1G03410 27.682 289 173 7 46 334 87 339 1.46e-20 91.7
MS.gene063300.t1 AT1G03410 27.682 289 173 7 46 334 124 376 1.55e-20 92.0
MS.gene063300.t1 AT4G22880 28.896 308 183 11 38 339 70 347 1.89e-20 91.3
MS.gene063300.t1 AT4G22880 28.896 308 183 11 38 339 70 347 1.89e-20 91.3
MS.gene063300.t1 AT4G22880 28.896 308 183 11 38 339 70 347 1.89e-20 91.3
MS.gene063300.t1 AT1G49390 30.769 247 146 11 51 294 1 225 1.90e-20 89.7
MS.gene063300.t1 AT5G63590 28.247 308 185 8 23 320 16 297 1.92e-20 90.5
MS.gene063300.t1 AT5G59540 28.425 292 178 10 35 320 80 346 3.58e-20 90.5
MS.gene063300.t1 AT1G50960 24.843 318 194 9 21 328 40 322 4.85e-20 89.7
MS.gene063300.t1 AT4G16330 26.214 309 194 13 24 326 70 350 5.37e-20 90.1
MS.gene063300.t1 AT3G51240 28.736 261 161 9 40 297 62 300 1.30e-19 89.0
MS.gene063300.t1 AT5G51310 29.021 286 158 11 21 288 5 263 1.76e-19 88.2
MS.gene063300.t1 AT1G52820 25.915 328 205 10 21 335 12 314 1.83e-19 87.8
MS.gene063300.t1 AT2G34555 29.348 276 168 10 20 291 26 278 2.01e-19 88.2
MS.gene063300.t1 AT2G30840 28.431 306 164 13 35 323 78 345 3.61e-19 87.8
MS.gene063300.t1 AT4G25310 29.457 258 152 12 35 288 70 301 9.31e-19 86.3
MS.gene063300.t1 AT3G19010 28.906 256 156 10 15 261 25 263 9.33e-19 85.5
MS.gene063300.t1 AT1G04380 25.676 296 186 8 35 326 61 326 9.58e-19 86.3
MS.gene063300.t1 AT1G47990 27.152 302 178 10 23 311 17 289 1.03e-18 85.9
MS.gene063300.t1 AT5G07200 25.442 283 166 7 32 298 75 328 1.08e-18 86.7
MS.gene063300.t1 AT1G06650 23.986 296 195 8 32 322 81 351 2.12e-18 85.5
MS.gene063300.t1 AT1G06620 27.206 272 167 10 46 312 92 337 5.50e-18 84.3
MS.gene063300.t1 AT1G04350 25.472 318 203 10 11 320 49 340 6.58e-18 84.0
MS.gene063300.t1 AT2G30830 28.707 317 157 13 38 328 77 350 6.66e-18 84.0
MS.gene063300.t1 AT5G05600 30.088 226 135 9 38 261 85 289 1.54e-17 82.0
MS.gene063300.t1 AT2G19590 27.972 286 173 9 20 301 13 269 3.06e-17 81.6
MS.gene063300.t1 AT5G63595 25.517 290 159 9 23 303 27 268 5.56e-17 80.5
MS.gene063300.t1 AT2G44800 25.305 328 204 12 16 328 50 351 8.11e-17 80.9
MS.gene063300.t1 AT2G30840 28.105 306 159 14 35 323 78 339 9.02e-17 80.9
MS.gene063300.t1 AT3G61400 26.246 301 175 10 46 334 95 360 1.01e-16 80.9
MS.gene063300.t1 AT1G30040 28.906 256 158 8 8 261 19 252 2.99e-16 78.2
MS.gene063300.t1 AT3G19000 27.273 231 145 8 38 261 54 268 4.57e-16 77.8
MS.gene063300.t1 AT3G55970 29.741 232 140 9 33 261 70 281 6.42e-16 77.4
MS.gene063300.t1 AT1G02400 25.155 322 191 9 23 326 26 315 8.46e-16 77.4
MS.gene063300.t1 AT5G43450 25.984 254 156 7 15 261 51 279 9.38e-16 77.0
MS.gene063300.t1 AT5G12270 25.705 319 197 10 23 329 58 348 1.30e-15 77.4
MS.gene063300.t1 AT4G25310 28.794 257 127 12 35 288 70 273 3.40e-15 75.9
MS.gene063300.t1 AT1G03400 25.704 284 161 9 15 286 50 295 6.17e-15 75.1
MS.gene063300.t1 AT4G16330 28.426 197 123 7 132 326 64 244 6.27e-15 73.9
MS.gene063300.t1 AT4G25300 36.242 149 81 6 144 288 72 210 2.39e-14 72.4
MS.gene063300.t1 AT4G23340 33.884 121 75 2 208 327 64 180 2.40e-14 71.2
MS.gene063300.t1 AT3G51240 32.335 167 101 6 133 297 60 216 2.81e-14 72.4
MS.gene063300.t1 AT1G06640 23.684 228 147 7 33 259 82 283 3.51e-14 72.4
MS.gene063300.t1 AT2G25450 26.645 304 175 10 35 326 74 341 5.73e-14 72.4
MS.gene063300.t1 AT1G06645 23.529 306 179 12 33 322 95 361 4.38e-13 70.1
MS.gene063300.t1 AT1G06650 22.034 236 159 6 32 267 81 291 1.26e-11 65.1

Find 89 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAAGGGTTTATCTGATTC+TGG 0.185968 6.1:+78091137 None:intergenic
TTTAAGGCATGTTTGGATTC+TGG 0.186194 6.1:-78091698 MS.gene063300:intron
CCATTTATTAGGCCCATAAA+AGG 0.223494 6.1:+78091121 None:intergenic
TACAAAGAGGGGTATTATAT+TGG 0.274004 6.1:-78091182 MS.gene063300:CDS
ATTGGCTCTCCCAGCATTTC+CGG 0.297940 6.1:+78089995 None:intergenic
AGGGTTAGTGTCTGATTTGC+AGG 0.318804 6.1:+78087860 None:intergenic
TTAACGGATTGGTTTATGTT+TGG 0.323726 6.1:+78091857 None:intergenic
ATCCGTTAATTTACTCAAAC+AGG 0.324872 6.1:-78091843 MS.gene063300:intron
TGGTGTGTAGATATTCTTCC+AGG 0.326423 6.1:-78090985 MS.gene063300:intron
CGATCATGTCTCTGGTCTTC+AGG 0.326775 6.1:-78089772 MS.gene063300:intron
TCCACACTGCACCGAGTTCT+AGG 0.336338 6.1:-78088144 MS.gene063300:CDS
CCTGGTGCAGGCCATTTATT+AGG 0.354989 6.1:+78091110 None:intergenic
AACCTGTTTGAGTAAATTAA+CGG 0.361508 6.1:+78091841 None:intergenic
GATCCTGAAAATCAACTTCA+TGG 0.371484 6.1:-78091518 MS.gene063300:intron
GGGATGCTAAACCTCAGAAA+TGG 0.380576 6.1:-78089453 MS.gene063300:CDS
GATCCCTTGAAAGGATTATT+CGG 0.402016 6.1:-78089840 MS.gene063300:CDS
TTTCGATAAGCCGGAAATGC+TGG 0.406273 6.1:-78090005 MS.gene063300:CDS
TGGAATTAGTGAGGAATTCA+TGG 0.407317 6.1:-78091654 MS.gene063300:CDS
GCTGGAGCTCATACCGACTA+TGG 0.409650 6.1:-78089816 MS.gene063300:CDS
TTTAACTCTTTACCTGGTGC+AGG 0.428299 6.1:+78091098 None:intergenic
TCAAGTAACTCATCAAGAAC+AGG 0.432111 6.1:+78091539 None:intergenic
AGGTAGTCGCGGCATAAGAT+AGG 0.433152 6.1:+78087503 None:intergenic
ACTCTACGTTTGCTGCACTA+TGG 0.433278 6.1:-78089968 MS.gene063300:CDS
AAAAGGGTTTATCTGATTCT+GGG 0.434184 6.1:+78091138 None:intergenic
GGATTGGTTTATGTTTGGAT+TGG 0.438713 6.1:+78091862 None:intergenic
TGGAAAGGTCGATGAGATTG+AGG 0.452388 6.1:+78091882 None:intergenic
CTGCACCGAGTTCTAGGAAA+TGG 0.462191 6.1:-78088138 MS.gene063300:CDS
TATTGCAGATATGCAAGGAT+AGG 0.463971 6.1:-78089474 MS.gene063300:intron
TAGATATTCTTCCAGGGTGG+AGG 0.466651 6.1:-78090978 MS.gene063300:CDS
AGGGCATTCGTAGTGAATCT+TGG 0.468286 6.1:-78088922 MS.gene063300:CDS
TTAGCAACCGATCATGTCTC+TGG 0.480639 6.1:-78089780 MS.gene063300:CDS
CAAGTAGGGGATTACAAAGA+GGG 0.487078 6.1:-78091194 MS.gene063300:intron
ATTGCAGATATGCAAGGATA+GGG 0.488243 6.1:-78089473 MS.gene063300:intron
GTTTGAGTAAATTAACGGAT+TGG 0.490107 6.1:+78091846 None:intergenic
AGCTCCGAATAATCCTTTCA+AGG 0.494313 6.1:+78089836 None:intergenic
TTGAAAGGATTATTCGGAGC+TGG 0.495160 6.1:-78089834 MS.gene063300:CDS
AAATGGTCAAGAGAGATATT+CGG 0.495720 6.1:-78088121 MS.gene063300:intron
AATGGAAAAGTTTCATAAAG+AGG 0.496962 6.1:-78090950 MS.gene063300:CDS
CCTAATAAATGGCCTGCACC+AGG 0.499540 6.1:-78091110 MS.gene063300:intron
ACCTCAGAAATGGGAGGATG+TGG 0.502188 6.1:-78089443 MS.gene063300:CDS
TGTCTGATTTGCAGGTTGGT+AGG 0.504730 6.1:+78087868 None:intergenic
CATGAGTATCATTGTAGCGC+TGG 0.508781 6.1:+78087477 None:intergenic
TAGTGAGGAATTCATGGATG+AGG 0.509057 6.1:-78091648 MS.gene063300:CDS
TCCATTGTCTCCCTCCACCC+TGG 0.510106 6.1:+78090967 None:intergenic
GGATGCTAAACCTCAGAAAT+GGG 0.512864 6.1:-78089452 MS.gene063300:CDS
GCCACATCCTCCCATTTCTG+AGG 0.519372 6.1:+78089442 None:intergenic
TGAATTCCTCACTAATTCCA+TGG 0.519515 6.1:+78091657 None:intergenic
TTCGATAAGCCGGAAATGCT+GGG 0.521365 6.1:-78090004 MS.gene063300:CDS
CTTGACCATTTCCTAGAACT+CGG 0.522617 6.1:+78088133 None:intergenic
CATTTATTAGGCCCATAAAA+GGG 0.522621 6.1:+78091122 None:intergenic
ATGCTTGAGCGTTGGAGCAA+CGG 0.525764 6.1:-78088895 MS.gene063300:CDS
TTTGTTTGAAGGTCAAGTAT+CGG 0.528121 6.1:-78089862 MS.gene063300:intron
AGCAAACGTAGAGTCGCAAT+TGG 0.532175 6.1:+78089977 None:intergenic
TTTGTGGAATCCAGAGAAGT+GGG 0.533512 6.1:-78090079 MS.gene063300:intron
GGTTTATGTTTGGATTGGAA+AGG 0.536060 6.1:+78091867 None:intergenic
CATTATTAACTCACTTGGGA+GGG 0.543347 6.1:+78087841 None:intergenic
GAGGATGTGGCACCATTGAA+AGG 0.546910 6.1:-78089430 MS.gene063300:CDS
TATCATTGTAGCGCTGGCTG+AGG 0.552591 6.1:+78087483 None:intergenic
TTAGTGTCTGATTTGCAGGT+TGG 0.554222 6.1:+78087864 None:intergenic
ATTTGTGGAATCCAGAGAAG+TGG 0.555603 6.1:-78090080 MS.gene063300:intron
AGAGAAGTGGGGAAAGCGGT+TGG 0.556302 6.1:-78090067 MS.gene063300:CDS
CAGCATCTAAATCAAGTGCA+AGG 0.561459 6.1:+78090032 None:intergenic
AGAAGGACTAACCCTTTCAA+TGG 0.563794 6.1:+78089418 None:intergenic
CAAGTATCGGATCCCTTGAA+AGG 0.568389 6.1:-78089849 MS.gene063300:CDS
TCCAGGGTGGAGGGAGACAA+TGG 0.573434 6.1:-78090968 MS.gene063300:CDS
TTGGTGACATGCTTGAGCGT+TGG 0.574643 6.1:-78088903 MS.gene063300:CDS
TCATTATTAACTCACTTGGG+AGG 0.577937 6.1:+78087840 None:intergenic
GCTCCGAATAATCCTTTCAA+GGG 0.578265 6.1:+78089837 None:intergenic
TCAAGTAGGGGATTACAAAG+AGG 0.579771 6.1:-78091195 MS.gene063300:intron
GCCTAGTCATGATTGTCTCG+TGG 0.580777 6.1:-78087895 MS.gene063300:CDS
AGGATGTGGCACCATTGAAA+GGG 0.581832 6.1:-78089429 MS.gene063300:intron
CAGCGTAATTAAACCATAGT+CGG 0.587832 6.1:+78089803 None:intergenic
CAAGTAACTCATCAAGAACA+GGG 0.589749 6.1:+78091540 None:intergenic
AGATATTCTTCCAGGGTGGA+GGG 0.604453 6.1:-78090977 MS.gene063300:CDS
AGCATCTAAATCAAGTGCAA+GGG 0.606532 6.1:+78090033 None:intergenic
GGTGTGTAGATATTCTTCCA+GGG 0.624659 6.1:-78090984 MS.gene063300:intron
TAGTCGCGGCATAAGATAGG+AGG 0.627608 6.1:+78087506 None:intergenic
ATCCAGAGAAGTGGGGAAAG+CGG 0.628017 6.1:-78090071 MS.gene063300:intron
CTACGTTTGCTGCACTATGG+AGG 0.629326 6.1:-78089965 MS.gene063300:intron
AGCGCTGGCTGAGGTAGTCG+CGG 0.640629 6.1:+78087492 None:intergenic
GTGTAGATATTCTTCCAGGG+TGG 0.654160 6.1:-78090981 MS.gene063300:intron
TCCACGAGACAATCATGACT+AGG 0.659102 6.1:+78087894 None:intergenic
TCCTAGAACTCGGTGCAGTG+TGG 0.660565 6.1:+78088143 None:intergenic
TGTAAACCATGGAATTAGTG+AGG 0.660905 6.1:-78091663 MS.gene063300:CDS
CTGAAGACCAGAGACATGAT+CGG 0.665054 6.1:+78089773 None:intergenic
TTGTGGAATCCAGAGAAGTG+GGG 0.667401 6.1:-78090078 MS.gene063300:intron
AAGTAGGGGATTACAAAGAG+GGG 0.671792 6.1:-78091193 MS.gene063300:intron
TGCTAAACCTCAGAAATGGG+AGG 0.675789 6.1:-78089449 MS.gene063300:CDS
AAGTAACTCATCAAGAACAG+GGG 0.720593 6.1:+78091541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CACAAAATATAAAATTTAAA+TGG + chr6.1:78091186-78091205 None:intergenic 10.0%
!! TTCATAAAAAAATATATTAC+GGG - chr6.1:78090213-78090232 MS.gene063300:intron 10.0%
!!! AATCAATAACTTTTAAAAAA+AGG - chr6.1:78090602-78090621 MS.gene063300:intron 10.0%
!! AACATGACAAAAATAAAAAT+CGG + chr6.1:78089254-78089273 None:intergenic 15.0%
!! CAAATATCATTATCATTATT+AGG + chr6.1:78090720-78090739 None:intergenic 15.0%
!! TATGAAATTAGTATTCTATT+TGG - chr6.1:78088341-78088360 MS.gene063300:intron 15.0%
!! TCATAAAAAAATATATTACG+GGG - chr6.1:78090214-78090233 MS.gene063300:intron 15.0%
!! TTTAAACACATTAAATAATG+CGG + chr6.1:78087998-78088017 None:intergenic 15.0%
!!! TATTGTTAAGGTTTTTAAAA+CGG - chr6.1:78088901-78088920 MS.gene063300:CDS 15.0%
!!! TGATTAATATTTTAGTCTAA+AGG - chr6.1:78089199-78089218 MS.gene063300:intron 15.0%
!!! TGATTTTTTGTGTTTTTTTA+AGG - chr6.1:78087669-78087688 MS.gene063300:intron 15.0%
!!! TTTGATTTGCATTTATTTTT+AGG - chr6.1:78091216-78091235 MS.gene063300:intron 15.0%
!! ACTTGTCAATATTATTGTTA+AGG - chr6.1:78088889-78088908 MS.gene063300:CDS 20.0%
!! TTACATAGTGAAATCTTAAT+CGG + chr6.1:78088122-78088141 None:intergenic 20.0%
!!! AAACTTTTTGTTATTTTGAC+TGG - chr6.1:78088161-78088180 MS.gene063300:intron 20.0%
!!! AATCAGATTTTTACTCTTAA+AGG + chr6.1:78088319-78088338 None:intergenic 20.0%
!!! ATTCCATTTTTGCAAATTAT+TGG - chr6.1:78088601-78088620 MS.gene063300:intron 20.0%
!!! CTATCAAAACATTGTTTTTT+CGG - chr6.1:78091631-78091650 MS.gene063300:CDS 20.0%
!!! TAATTTTTTCTGTACTTTGT+TGG - chr6.1:78088378-78088397 MS.gene063300:intron 20.0%
!!! TATTTTTTTAACTCTTTACC+TGG + chr6.1:78088294-78088313 None:intergenic 20.0%
!!! TGTAATTTTGATGAATTGTT+TGG + chr6.1:78090292-78090311 None:intergenic 20.0%
!!! TTAAAGTTCTAGAAATATAC+TGG + chr6.1:78090329-78090348 None:intergenic 20.0%
!!! TTCCATTTTTGCAAATTATT+GGG - chr6.1:78088602-78088621 MS.gene063300:intron 20.0%
!!! TTTTATGTATATGACAATTG+CGG + chr6.1:78091805-78091824 None:intergenic 20.0%
! AAATTCTATAGCATAACTGA+TGG + chr6.1:78090790-78090809 None:intergenic 25.0%
! AACAATAATATTGACAAGTG+TGG + chr6.1:78088888-78088907 None:intergenic 25.0%
! AACCTGTTTGAGTAAATTAA+CGG + chr6.1:78087545-78087564 None:intergenic 25.0%
! AAGAACTTGGATCAATTATT+TGG - chr6.1:78090955-78090974 MS.gene063300:CDS 25.0%
! AATAGTAATATGAAGCACAA+TGG + chr6.1:78088842-78088861 None:intergenic 25.0%
! AATGGAAAAGTTTCATAAAG+AGG - chr6.1:78088433-78088452 MS.gene063300:intron 25.0%
! ACCAACTTATTGATCTTTAT+AGG - chr6.1:78088735-78088754 MS.gene063300:intron 25.0%
! AGAAAAATTGCAATCAAATC+AGG + chr6.1:78089008-78089027 None:intergenic 25.0%
! AGCTACTTACATTATTTAAC+TGG - chr6.1:78090425-78090444 MS.gene063300:intron 25.0%
! AGTACTTTGTACAGTTATAA+AGG - chr6.1:78089469-78089488 MS.gene063300:CDS 25.0%
! ATCGAATTCGAATATTTATG+AGG - chr6.1:78090920-78090939 MS.gene063300:intron 25.0%
! ATGTCATTATTAACTCACTT+GGG + chr6.1:78091549-78091568 None:intergenic 25.0%
! ATTTAATCTGTATGCACTTT+AGG - chr6.1:78087934-78087953 MS.gene063300:intron 25.0%
! CCAATAATAATTTGAGAGAA+TGG - chr6.1:78089737-78089756 MS.gene063300:intron 25.0%
! CCATTCTCTCAAATTATTAT+TGG + chr6.1:78089740-78089759 None:intergenic 25.0%
! GACAAGTATTCTTAATTATC+TGG + chr6.1:78089860-78089879 None:intergenic 25.0%
! GTATTCTTAATTATCTGGTA+TGG + chr6.1:78089855-78089874 None:intergenic 25.0%
! GTTAAATAATGTAAGTAGCT+CGG + chr6.1:78090425-78090444 None:intergenic 25.0%
! GTTATATTCATTCATTGATG+CGG - chr6.1:78088030-78088049 MS.gene063300:intron 25.0%
! TAAAAATTTACGTGAGCATA+TGG - chr6.1:78090894-78090913 MS.gene063300:intron 25.0%
! TAACTTCATGGCATATAATA+GGG + chr6.1:78091585-78091604 None:intergenic 25.0%
! TACTATTAGGGTTTGAAAAA+GGG - chr6.1:78088855-78088874 MS.gene063300:intron 25.0%
! TATTAAATACTGACACATGT+CGG - chr6.1:78089800-78089819 MS.gene063300:CDS 25.0%
! TCATTCTCAAAAAACAACAT+GGG - chr6.1:78087590-78087609 MS.gene063300:intron 25.0%
! TCCTATAAAGATCAATAAGT+TGG + chr6.1:78088739-78088758 None:intergenic 25.0%
! TCGAATTCGAATATTTATGA+GGG - chr6.1:78090921-78090940 MS.gene063300:intron 25.0%
! TGTGCTTCATATTACTATTA+GGG - chr6.1:78088843-78088862 MS.gene063300:intron 25.0%
! TTAAATAATGTAAGTAGCTC+GGG + chr6.1:78090424-78090443 None:intergenic 25.0%
! TTAACTTCATGGCATATAAT+AGG + chr6.1:78091586-78091605 None:intergenic 25.0%
! TTAAGAATCAAAATCGAAAG+AGG + chr6.1:78091322-78091341 None:intergenic 25.0%
! TTACTATTAGGGTTTGAAAA+AGG - chr6.1:78088854-78088873 MS.gene063300:intron 25.0%
! TTCAAACAAAAAGATGAACA+TGG + chr6.1:78089511-78089530 None:intergenic 25.0%
! TTCATTCTCAAAAAACAACA+TGG - chr6.1:78087589-78087608 MS.gene063300:intron 25.0%
! TTGAATGTAACTACATATGT+CGG - chr6.1:78089766-78089785 MS.gene063300:intron 25.0%
! TTGAGAAATGAAAAACATAG+AGG - chr6.1:78087814-78087833 MS.gene063300:intron 25.0%
! TTGTGCTTCATATTACTATT+AGG - chr6.1:78088842-78088861 MS.gene063300:intron 25.0%
!! AAAAGTATGCAATCTGTAAA+AGG + chr6.1:78091464-78091483 None:intergenic 25.0%
!! AATCAGATAAACCCTTTTAT+GGG - chr6.1:78088250-78088269 MS.gene063300:intron 25.0%
!! AATTTTTCTTGTACCAATCA+AGG - chr6.1:78089019-78089038 MS.gene063300:intron 25.0%
!! ACACCTTTAATTTAAAGTGT+CGG + chr6.1:78088520-78088539 None:intergenic 25.0%
!! AGCTTTTATAGGTTACAAAT+AGG - chr6.1:78089996-78090015 MS.gene063300:CDS 25.0%
!! TGATGTTATGTTTCTGTAAT+AGG - chr6.1:78088471-78088490 MS.gene063300:intron 25.0%
!! TTTACAGATTGCATACTTTT+TGG - chr6.1:78091464-78091483 MS.gene063300:intron 25.0%
!! TTTTTCTATGTTGTAAACCA+TGG - chr6.1:78087709-78087728 MS.gene063300:intron 25.0%
!!! AAAACAATGTTTTGATAGCA+AGG + chr6.1:78091629-78091648 None:intergenic 25.0%
!!! ATGTTCATCTTTTTGTTTGA+AGG - chr6.1:78089510-78089529 MS.gene063300:intron 25.0%
!!! GATTTTTCAAAATCACAATG+CGG + chr6.1:78091761-78091780 None:intergenic 25.0%
!!! TCCATTTTTGCAAATTATTG+GGG - chr6.1:78088603-78088622 MS.gene063300:intron 25.0%
!!! TTCGCTATTTGTTTTATTTG+TGG - chr6.1:78089288-78089307 MS.gene063300:intron 25.0%
AAAAGGGTTTATCTGATTCT+GGG + chr6.1:78088248-78088267 None:intergenic 30.0%
AAACAACTTGTGTAGTGTAT+TGG - chr6.1:78089154-78089173 MS.gene063300:intron 30.0%
AAATGGTCAAGAGAGATATT+CGG - chr6.1:78091262-78091281 MS.gene063300:intron 30.0%
AAATGTTCTTGAAGGAACAT+CGG + chr6.1:78090135-78090154 None:intergenic 30.0%
AAGAAATCTTTCTCACCTTA+TGG - chr6.1:78090522-78090541 MS.gene063300:intron 30.0%
AGTGCTTTATAACAACAATG+CGG + chr6.1:78090667-78090686 None:intergenic 30.0%
ATAAAAGCTACAAAGACAGA+AGG + chr6.1:78089985-78090004 None:intergenic 30.0%
ATCCGTTAATTTACTCAAAC+AGG - chr6.1:78087540-78087559 MS.gene063300:intron 30.0%
ATGGTTTATGTAAGACAATC+AGG + chr6.1:78088765-78088784 None:intergenic 30.0%
CATTTATTAGGCCCATAAAA+GGG + chr6.1:78088264-78088283 None:intergenic 30.0%
CGATCATTTGTGTTTCAAAT+TGG - chr6.1:78088703-78088722 MS.gene063300:intron 30.0%
GAGGAAAAAAATGTTCTTGA+AGG + chr6.1:78090143-78090162 None:intergenic 30.0%
GATGTCATTATTAACTCACT+TGG + chr6.1:78091550-78091569 None:intergenic 30.0%
TAAAAGGGTTTATCTGATTC+TGG + chr6.1:78088249-78088268 None:intergenic 30.0%
TGTAAATGTAAGCATTAGTC+AGG + chr6.1:78090697-78090716 None:intergenic 30.0%
TGTTTCCAAATGAACAATCA+AGG + chr6.1:78089139-78089158 None:intergenic 30.0%
TTGTCTTATAAATTCCTCCA+AGG + chr6.1:78090583-78090602 None:intergenic 30.0%
TTTACGTTACTGTCATAGTT+TGG - chr6.1:78090169-78090188 MS.gene063300:intron 30.0%
TTTGTTTGAAGGTCAAGTAT+CGG - chr6.1:78089521-78089540 MS.gene063300:intron 30.0%
! ACCCCAATAATTTGCAAAAA+TGG + chr6.1:78088607-78088626 None:intergenic 30.0%
! ATCTTCATCTTTTCCTTCAA+AGG + chr6.1:78087793-78087812 None:intergenic 30.0%
! CTTTAAATTAAAGGTGTGTC+TGG - chr6.1:78088523-78088542 MS.gene063300:intron 30.0%
! GAATCAGATAAACCCTTTTA+TGG - chr6.1:78088249-78088268 MS.gene063300:intron 30.0%
! GTTTGAGTAAATTAACGGAT+TGG + chr6.1:78087540-78087559 None:intergenic 30.0%
! TCTGTCTTTGTAGCTTTTAT+AGG - chr6.1:78089985-78090004 MS.gene063300:CDS 30.0%
! TCTTTTATTGCAGATATGCA+AGG - chr6.1:78089904-78089923 MS.gene063300:intron 30.0%
! TGACTAAGGTATTAACTTCA+TGG + chr6.1:78091597-78091616 None:intergenic 30.0%
! TGAGGATAGAGAATTTTGTT+GGG + chr6.1:78087486-78087505 None:intergenic 30.0%
! TTGAGGATAGAGAATTTTGT+TGG + chr6.1:78087487-78087506 None:intergenic 30.0%
! TTTGTTCTTGTTTGTCACAA+AGG - chr6.1:78090736-78090755 MS.gene063300:intron 30.0%
!! TAAGTCTTGTGATTTGTTTC+TGG + chr6.1:78091118-78091137 None:intergenic 30.0%
!! TACAAAGAGGGGTATTATAT+TGG - chr6.1:78088201-78088220 MS.gene063300:intron 30.0%
!! TTAACGGATTGGTTTATGTT+TGG + chr6.1:78087529-78087548 None:intergenic 30.0%
!! TTACCATGAAGTTGATTTTC+AGG + chr6.1:78087871-78087890 None:intergenic 30.0%
!!! CATTGTTTTTTCGGTTAAGA+CGG - chr6.1:78091640-78091659 MS.gene063300:CDS 30.0%
!!! GTGTTTTTTTAAGGCATGTT+TGG - chr6.1:78087678-78087697 MS.gene063300:intron 30.0%
!!! TTTGACTGGTTTTTCAAGTA+GGG - chr6.1:78088175-78088194 MS.gene063300:intron 30.0%
!!! TTTTGACTGGTTTTTCAAGT+AGG - chr6.1:78088174-78088193 MS.gene063300:intron 30.0%
AACCACCTTGATTGTTCATT+TGG - chr6.1:78089131-78089150 MS.gene063300:intron 35.0%
AAGTAACTCATCAAGAACAG+GGG + chr6.1:78087845-78087864 None:intergenic 35.0%
ACAGTAACGTAAACAAATCG+AGG + chr6.1:78090162-78090181 None:intergenic 35.0%
AGCATCTAAATCAAGTGCAA+GGG + chr6.1:78089353-78089372 None:intergenic 35.0%
ATTGCAGATATGCAAGGATA+GGG - chr6.1:78089910-78089929 MS.gene063300:intron 35.0%
CAAAGTTCAAATCGTTGTTG+CGG + chr6.1:78089058-78089077 None:intergenic 35.0%
CAAGGAATGAAATCTGACTA+AGG + chr6.1:78091611-78091630 None:intergenic 35.0%
CAAGTAACTCATCAAGAACA+GGG + chr6.1:78087846-78087865 None:intergenic 35.0%
CAGCGTAATTAAACCATAGT+CGG + chr6.1:78089583-78089602 None:intergenic 35.0%
CATTATTAACTCACTTGGGA+GGG + chr6.1:78091545-78091564 None:intergenic 35.0%
CCATTTATTAGGCCCATAAA+AGG + chr6.1:78088265-78088284 None:intergenic 35.0%
GATCCCTTGAAAGGATTATT+CGG - chr6.1:78089543-78089562 MS.gene063300:intron 35.0%
GATCCTGAAAATCAACTTCA+TGG - chr6.1:78087865-78087884 MS.gene063300:CDS 35.0%
TAGCAGCTTAAAGAAGACAT+AGG + chr6.1:78090983-78091002 None:intergenic 35.0%
TATTGCAGATATGCAAGGAT+AGG - chr6.1:78089909-78089928 MS.gene063300:intron 35.0%
TCAAGTAACTCATCAAGAAC+AGG + chr6.1:78087847-78087866 None:intergenic 35.0%
TCATTATTAACTCACTTGGG+AGG + chr6.1:78091546-78091565 None:intergenic 35.0%
TGAACCAGAAAAAAGATCTG+AGG + chr6.1:78091292-78091311 None:intergenic 35.0%
TGAATTCCTCACTAATTCCA+TGG + chr6.1:78087729-78087748 None:intergenic 35.0%
TGATGAATTGTTTGGTCCTA+TGG + chr6.1:78090284-78090303 None:intergenic 35.0%
TGGAATTAGTGAGGAATTCA+TGG - chr6.1:78087729-78087748 MS.gene063300:intron 35.0%
TGTAAACCATGGAATTAGTG+AGG - chr6.1:78087720-78087739 MS.gene063300:intron 35.0%
TTCCAAATGAACAATCAAGG+TGG + chr6.1:78089136-78089155 None:intergenic 35.0%
TTGTATGTTTGCAAGTGCAT+TGG - chr6.1:78088959-78088978 MS.gene063300:intron 35.0%
TTGTGATTGCAGTCATATCA+TGG - chr6.1:78091675-78091694 MS.gene063300:CDS 35.0%
! AATTTTGTTGGGTCAGAAAC+AGG + chr6.1:78087475-78087494 None:intergenic 35.0%
! AGTCCCTTTTACGTTGAAAA+CGG - chr6.1:78089091-78089110 MS.gene063300:intron 35.0%
! ATGAGACTTTAGTTTCTCTG+TGG - chr6.1:78091071-78091090 MS.gene063300:intron 35.0%
! ATTTTGTTGGGTCAGAAACA+GGG + chr6.1:78087474-78087493 None:intergenic 35.0%
! ATTTTTCACCCTTCCTTTGA+AGG - chr6.1:78087777-78087796 MS.gene063300:intron 35.0%
! CATCTTTTCCTTCAAAGGAA+GGG + chr6.1:78087788-78087807 None:intergenic 35.0%
! CCTTTTATGGGCCTAATAAA+TGG - chr6.1:78088262-78088281 MS.gene063300:intron 35.0%
! GCACCGACACTTTAAATTAA+AGG - chr6.1:78088514-78088533 MS.gene063300:intron 35.0%
! GGTTTATGTTTGGATTGGAA+AGG + chr6.1:78087519-78087538 None:intergenic 35.0%
! TCATCTTTTCCTTCAAAGGA+AGG + chr6.1:78087789-78087808 None:intergenic 35.0%
! TTGTGACCTACATTTTGTGT+CGG - chr6.1:78088642-78088661 MS.gene063300:intron 35.0%
! TTTAAGGCATGTTTGGATTC+TGG - chr6.1:78087685-78087704 MS.gene063300:intron 35.0%
! TTTTCAACGTAAAAGGGACT+AGG + chr6.1:78089091-78089110 None:intergenic 35.0%
!! AGGTATTGAATCAGTGATCT+TGG - chr6.1:78089438-78089457 MS.gene063300:CDS 35.0%
!! GGATTGGTTTATGTTTGGAT+TGG + chr6.1:78087524-78087543 None:intergenic 35.0%
!!! ATGCCGTTTTCAACGTAAAA+GGG + chr6.1:78089097-78089116 None:intergenic 35.0%
!!! TAAGCCTCAGATCTTTTTTC+TGG - chr6.1:78091285-78091304 MS.gene063300:intron 35.0%
!!! TATGCCGTTTTCAACGTAAA+AGG + chr6.1:78089098-78089117 None:intergenic 35.0%
!!! TGCTGATTTTTTCGATAAGC+CGG - chr6.1:78089369-78089388 MS.gene063300:intron 35.0%
!!! TTGACTGGTTTTTCAAGTAG+GGG - chr6.1:78088176-78088195 MS.gene063300:intron 35.0%
AAGTAGGGGATTACAAAGAG+GGG - chr6.1:78088190-78088209 MS.gene063300:intron 40.0%
ACAGCATCAAAGTACACCAT+AGG - chr6.1:78090265-78090284 MS.gene063300:intron 40.0%
ACTGACATAGACACAGAACA+CGG - chr6.1:78089692-78089711 MS.gene063300:intron 40.0%
AGAAGGACTAACCCTTTCAA+TGG + chr6.1:78089968-78089987 None:intergenic 40.0%
AGCTCCGAATAATCCTTTCA+AGG + chr6.1:78089550-78089569 None:intergenic 40.0%
AGGCATATTTCTTTCCTTGG+AGG - chr6.1:78090566-78090585 MS.gene063300:intron 40.0%
ATTTGTGGAATCCAGAGAAG+TGG - chr6.1:78089303-78089322 MS.gene063300:intron 40.0%
CAAGTAGGGGATTACAAAGA+GGG - chr6.1:78088189-78088208 MS.gene063300:intron 40.0%
CAGCATCTAAATCAAGTGCA+AGG + chr6.1:78089354-78089373 None:intergenic 40.0%
CATAAACCATACCATGTGCT+TGG - chr6.1:78088775-78088794 MS.gene063300:intron 40.0%
CATTAAGAGCCAAGTCATCA+AGG + chr6.1:78090868-78090887 None:intergenic 40.0%
CGCAACAACGATTTGAACTT+TGG - chr6.1:78089056-78089075 MS.gene063300:intron 40.0%
CTATGTTGAAACCAAGCACA+TGG + chr6.1:78088789-78088808 None:intergenic 40.0%
CTTGACCATTTCCTAGAACT+CGG + chr6.1:78091253-78091272 None:intergenic 40.0%
GACTCATGAGTCAAAAGGTT+CGG + chr6.1:78090073-78090092 None:intergenic 40.0%
GCTCCGAATAATCCTTTCAA+GGG + chr6.1:78089549-78089568 None:intergenic 40.0%
GGATGCTAAACCTCAGAAAT+GGG - chr6.1:78089931-78089950 MS.gene063300:intron 40.0%
GGCTTGTAGTCATAAGAACT+TGG - chr6.1:78090942-78090961 MS.gene063300:intron 40.0%
GGTGTGTAGATATTCTTCCA+GGG - chr6.1:78088399-78088418 MS.gene063300:intron 40.0%
GTCATGACTCATGAGTCAAA+AGG + chr6.1:78090078-78090097 None:intergenic 40.0%
TAGTGAGGAATTCATGGATG+AGG - chr6.1:78087735-78087754 MS.gene063300:intron 40.0%
TCAAGTAGGGGATTACAAAG+AGG - chr6.1:78088188-78088207 MS.gene063300:intron 40.0%
TGGTGTGTAGATATTCTTCC+AGG - chr6.1:78088398-78088417 MS.gene063300:intron 40.0%
TTGAAACCAAGCACATGGTA+TGG + chr6.1:78088784-78088803 None:intergenic 40.0%
TTGAAAGGATTATTCGGAGC+TGG - chr6.1:78089549-78089568 MS.gene063300:intron 40.0%
TTTAACTCTTTACCTGGTGC+AGG + chr6.1:78088288-78088307 None:intergenic 40.0%
TTTGTGGAATCCAGAGAAGT+GGG - chr6.1:78089304-78089323 MS.gene063300:intron 40.0%
! TGAGAGATTCCTTGATGACT+TGG - chr6.1:78090856-78090875 MS.gene063300:intron 40.0%
! TGTCTGGTATCCACGTATTT+TGG - chr6.1:78088539-78088558 MS.gene063300:intron 40.0%
! TTAGTGTCTGATTTGCAGGT+TGG + chr6.1:78091522-78091541 None:intergenic 40.0%
! TTTTGTTGGGTCAGAAACAG+GGG + chr6.1:78087473-78087492 None:intergenic 40.0%
!! ATTTTGTGTCGGTGCTTCAT+AGG - chr6.1:78088653-78088672 MS.gene063300:intron 40.0%
!! GCAATCAAATCAGGTTGATG+TGG + chr6.1:78088999-78089018 None:intergenic 40.0%
AGATATTCTTCCAGGGTGGA+GGG - chr6.1:78088406-78088425 MS.gene063300:intron 45.0%
AGCAAACGTAGAGTCGCAAT+TGG + chr6.1:78089409-78089428 None:intergenic 45.0%
AGCACAATGGTCACATGACA+AGG + chr6.1:78088829-78088848 None:intergenic 45.0%
AGGATGTGGCACCATTGAAA+GGG - chr6.1:78089954-78089973 MS.gene063300:intron 45.0%
ATCGAGCGCAGAAAACCATA+AGG + chr6.1:78090540-78090559 None:intergenic 45.0%
CAATTGCGGCTGCAACATTA+AGG + chr6.1:78091791-78091810 None:intergenic 45.0%
CATACAAAACCTCGACGTCA+CGG + chr6.1:78088946-78088965 None:intergenic 45.0%
CATGAGTATCATTGTAGCGC+TGG + chr6.1:78091909-78091928 None:intergenic 45.0%
CATGTGACAAGTCATACCGT+CGG - chr6.1:78090238-78090257 MS.gene063300:intron 45.0%
CCACATCACTAGTCCTTGAT+TGG + chr6.1:78089035-78089054 None:intergenic 45.0%
CTGAAGACCAGAGACATGAT+CGG + chr6.1:78089613-78089632 None:intergenic 45.0%
CTTTGATGCTGTTGAACCGA+CGG + chr6.1:78090257-78090276 None:intergenic 45.0%
GGCAGGCATATTTCTTTCCT+TGG - chr6.1:78090563-78090582 MS.gene063300:intron 45.0%
GGGATGCTAAACCTCAGAAA+TGG - chr6.1:78089930-78089949 MS.gene063300:intron 45.0%
GTGTAGATATTCTTCCAGGG+TGG - chr6.1:78088402-78088421 MS.gene063300:intron 45.0%
GTGTCTGACACCAAAATACG+TGG + chr6.1:78088552-78088571 None:intergenic 45.0%
TAGATATTCTTCCAGGGTGG+AGG - chr6.1:78088405-78088424 MS.gene063300:intron 45.0%
TCCACGAGACAATCATGACT+AGG + chr6.1:78091492-78091511 None:intergenic 45.0%
TGCTAAACCTCAGAAATGGG+AGG - chr6.1:78089934-78089953 MS.gene063300:intron 45.0%
TGGAAAGGTCGATGAGATTG+AGG + chr6.1:78087504-78087523 None:intergenic 45.0%
TTAGCAACCGATCATGTCTC+TGG - chr6.1:78089603-78089622 MS.gene063300:intron 45.0%
TTCGATAAGCCGGAAATGCT+GGG - chr6.1:78089379-78089398 MS.gene063300:intron 45.0%
TTGTGGAATCCAGAGAAGTG+GGG - chr6.1:78089305-78089324 MS.gene063300:intron 45.0%
TTTCGATAAGCCGGAAATGC+TGG - chr6.1:78089378-78089397 MS.gene063300:intron 45.0%
! AACTGGTTGCTTTCGTTGCA+GGG - chr6.1:78090442-78090461 MS.gene063300:intron 45.0%
! ACTCTACGTTTGCTGCACTA+TGG - chr6.1:78089415-78089434 MS.gene063300:intron 45.0%
! AGGGCATTCGTAGTGAATCT+TGG - chr6.1:78090461-78090480 MS.gene063300:intron 45.0%
! AGGGTTAGTGTCTGATTTGC+AGG + chr6.1:78091526-78091545 None:intergenic 45.0%
! ATGTCTCTGGTCTTCAGGTA+AGG - chr6.1:78089616-78089635 MS.gene063300:intron 45.0%
! CCAATCAAGGACTAGTGATG+TGG - chr6.1:78089032-78089051 MS.gene063300:intron 45.0%
! TAACTGGTTGCTTTCGTTGC+AGG - chr6.1:78090441-78090460 MS.gene063300:intron 45.0%
!! CAAGTATCGGATCCCTTGAA+AGG - chr6.1:78089534-78089553 MS.gene063300:intron 45.0%
!! CGGCATTGACACTAACACAT+CGG - chr6.1:78089712-78089731 MS.gene063300:intron 45.0%
!! GAAGCACCGACACAAAATGT+AGG + chr6.1:78088651-78088670 None:intergenic 45.0%
!! TGTCTGATTTGCAGGTTGGT+AGG + chr6.1:78091518-78091537 None:intergenic 45.0%
!! ATTCATAAAAAAATATATTA+CGG - chr6.1:78090212-78090231 MS.gene063300:intron 5.0%
ACCTCAGAAATGGGAGGATG+TGG - chr6.1:78089940-78089959 MS.gene063300:intron 50.0%
AGGTAGTCGCGGCATAAGAT+AGG + chr6.1:78091883-78091902 None:intergenic 50.0%
ATCCAGAGAAGTGGGGAAAG+CGG - chr6.1:78089312-78089331 MS.gene063300:intron 50.0%
CCTAATAAATGGCCTGCACC+AGG - chr6.1:78088273-78088292 MS.gene063300:intron 50.0%
CCTGGTGCAGGCCATTTATT+AGG + chr6.1:78088276-78088295 None:intergenic 50.0%
GAGGATGTGGCACCATTGAA+AGG - chr6.1:78089953-78089972 MS.gene063300:intron 50.0%
GCCTAGTCATGATTGTCTCG+TGG - chr6.1:78091488-78091507 MS.gene063300:intron 50.0%
GTAAGTAGCTCGGGAGAACA+GGG + chr6.1:78090415-78090434 None:intergenic 50.0%
TAGTCGCGGCATAAGATAGG+AGG + chr6.1:78091880-78091899 None:intergenic 50.0%
TGTAAGTAGCTCGGGAGAAC+AGG + chr6.1:78090416-78090435 None:intergenic 50.0%
TTGATGCGGCAACACGTCAT+TGG - chr6.1:78088044-78088063 MS.gene063300:intron 50.0%
TTTGTGTGATGCTCAGGCAC+CGG - chr6.1:78090629-78090648 MS.gene063300:intron 50.0%
! ATTGGCTCTCCCAGCATTTC+CGG + chr6.1:78089391-78089410 None:intergenic 50.0%
! CGATCATGTCTCTGGTCTTC+AGG - chr6.1:78089611-78089630 MS.gene063300:intron 50.0%
! CTACGTTTGCTGCACTATGG+AGG - chr6.1:78089418-78089437 MS.gene063300:intron 50.0%
! TGGTTTTCTGCGCTCGATTG+AGG - chr6.1:78090542-78090561 MS.gene063300:intron 50.0%
! TTGGTGACATGCTTGAGCGT+TGG - chr6.1:78090480-78090499 MS.gene063300:intron 50.0%
!! ATGCTTGAGCGTTGGAGCAA+CGG - chr6.1:78090488-78090507 MS.gene063300:intron 50.0%
!! CTGCACCGAGTTCTAGGAAA+TGG - chr6.1:78091245-78091264 MS.gene063300:intron 50.0%
!! GGTCGTTTTGTGTGATGCTC+AGG - chr6.1:78090623-78090642 MS.gene063300:intron 50.0%
!! TATCATTGTAGCGCTGGCTG+AGG + chr6.1:78091903-78091922 None:intergenic 50.0%
AACCGCTTTCCCCACTTCTC+TGG + chr6.1:78089317-78089336 None:intergenic 55.0%
AACTTGTAGCCGTGACGTCG+AGG - chr6.1:78088934-78088953 MS.gene063300:intron 55.0%
AGAGAAGTGGGGAAAGCGGT+TGG - chr6.1:78089316-78089335 MS.gene063300:intron 55.0%
CGACGTCACGGCTACAAGTT+TGG + chr6.1:78088934-78088953 None:intergenic 55.0%
GCCACATCCTCCCATTTCTG+AGG + chr6.1:78089944-78089963 None:intergenic 55.0%
TCCACACTGCACCGAGTTCT+AGG - chr6.1:78091239-78091258 MS.gene063300:intron 55.0%
TTTCTGCGCTCGATTGAGGC+AGG - chr6.1:78090546-78090565 MS.gene063300:intron 55.0%
! GCTGGAGCTCATACCGACTA+TGG - chr6.1:78089567-78089586 MS.gene063300:intron 55.0%
!! TCCTAGAACTCGGTGCAGTG+TGG + chr6.1:78091243-78091262 None:intergenic 55.0%
AATGCGGCGATACCACCGAC+CGG + chr6.1:78090651-78090670 None:intergenic 60.0%
TCCAGGGTGGAGGGAGACAA+TGG - chr6.1:78088415-78088434 MS.gene063300:intron 60.0%
TCCATTGTCTCCCTCCACCC+TGG + chr6.1:78088419-78088438 None:intergenic 60.0%
!! TGTGATGCTCAGGCACCGGT+CGG - chr6.1:78090633-78090652 MS.gene063300:intron 60.0%
!! AGCGCTGGCTGAGGTAGTCG+CGG + chr6.1:78091894-78091913 None:intergenic 65.0%
!! GATGCTCAGGCACCGGTCGG+TGG - chr6.1:78090636-78090655 MS.gene063300:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 78087442 78091963 78087442 ID=MS.gene063300
chr6.1 mRNA 78087442 78091963 78087442 ID=MS.gene063300.t1;Parent=MS.gene063300
chr6.1 exon 78091844 78091963 78091844 ID=MS.gene063300.t1.exon1;Parent=MS.gene063300.t1
chr6.1 CDS 78091844 78091963 78091844 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78091519 78091714 78091519 ID=MS.gene063300.t1.exon2;Parent=MS.gene063300.t1
chr6.1 CDS 78091519 78091714 78091519 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78091111 78091209 78091111 ID=MS.gene063300.t1.exon3;Parent=MS.gene063300.t1
chr6.1 CDS 78091111 78091209 78091111 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78090946 78090997 78090946 ID=MS.gene063300.t1.exon4;Parent=MS.gene063300.t1
chr6.1 CDS 78090946 78090997 78090946 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78089966 78090087 78089966 ID=MS.gene063300.t1.exon5;Parent=MS.gene063300.t1
chr6.1 CDS 78089966 78090087 78089966 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78089773 78089873 78089773 ID=MS.gene063300.t1.exon6;Parent=MS.gene063300.t1
chr6.1 CDS 78089773 78089873 78089773 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78089430 78089488 78089430 ID=MS.gene063300.t1.exon7;Parent=MS.gene063300.t1
chr6.1 CDS 78089430 78089488 78089430 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78088886 78088942 78088886 ID=MS.gene063300.t1.exon8;Parent=MS.gene063300.t1
chr6.1 CDS 78088886 78088942 78088886 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78088122 78088167 78088122 ID=MS.gene063300.t1.exon9;Parent=MS.gene063300.t1
chr6.1 CDS 78088122 78088167 78088122 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78087855 78087934 78087855 ID=MS.gene063300.t1.exon10;Parent=MS.gene063300.t1
chr6.1 CDS 78087855 78087934 78087855 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
chr6.1 exon 78087442 78087532 78087442 ID=MS.gene063300.t1.exon11;Parent=MS.gene063300.t1
chr6.1 CDS 78087442 78087532 78087442 ID=cds.MS.gene063300.t1;Parent=MS.gene063300.t1
Gene Sequence

>MS.gene063300

ATGGGAAAACAGAGCAAAGAAACAGAATCCCCTGTTTCTGACCCAACAAAATTCTCTATCCTCAATCTCATCGACCTTTCCAATCCAAACATAAACCAATCCGTTAATTTACTCAAACAGGTTTGTTTCAATCACACTTTTCAATATTTCATTCTCAAAAAACAACATGGGTCAATTAAATTTACTCTGTTTTTTACTCTGTTTTTTTCGTTTGTTGTAATTAACATTGATTTTTTGTGTTTTTTTAAGGCATGTTTGGATTCTGGTTTTTTCTATGTTGTAAACCATGGAATTAGTGAGGAATTCATGGATGAGGTTTTTGAACAAAGTAAGAGATTTTTCACCCTTCCTTTGAAGGAAAAGATGAAGATTTTGAGAAATGAAAAACATAGAGGATATACCCCTGTTCTTGATGAGTTACTTGATCCTGAAAATCAACTTCATGGTAACACTCTTTTGATTTTATTGCATGTGTTTATAGAGATAGATTCAATTTAATCTGTATGCACTTTAGGTGTAAAATTGTTTTACACATGCATTTAACGATATGTTGCCGCATTATTTAATGTGTTTAAAAGCACATAAATTGTTATATTCATTCATTGATGCGGCAACACGTCATTGGACTAATGTGTATATTAATTTTACACTGTCAGTGTATAAAAATTAAACTTTTACCGATTAAGATTTCACTATGTAATTTTTTGAAAAATAATCTCAAACTTTTTGTTATTTTGACTGGTTTTTCAAGTAGGGGATTACAAAGAGGGGTATTATATTGGAGTTGAAGTAGATGAAGATGACCCAGAATCAGATAAACCCTTTTATGGGCCTAATAAATGGCCTGCACCAGGTAAAGAGTTAAAAAAATATACCTTTAAGAGTAAAAATCTGATTTTTATGAAATTAGTATTCTATTTGGTTTTATTTTTTTATTAATTTTTTCTGTACTTTGTTGGTGTGTAGATATTCTTCCAGGGTGGAGGGAGACAATGGAAAAGTTTCATAAAGAGGCATTGTAAGTACAAGTGATGTTATGTTTCTGTAATAGGATTATAAGATGCAGTACGTAGCACCGACACTTTAAATTAAAGGTGTGTCTGGTATCCACGTATTTTGGTGTCAGACACGACAATGACACATGTGATTGTATATTATTATTCCATTTTTGCAAATTATTGGGGTGTCGACGTGTCAATGTTGTGACCTACATTTTGTGTCGGTGCTTCATAGGATGTAACATGCAACTTTGCTACTGTTTCGATCATTTGTGTTTCAAATTGGAAGTGTCTTACCAACTTATTGATCTTTATAGGAAAACCTGATTGTCTTACATAAACCATACCATGTGCTTGGTTTCAACATAGAATGATTTCATTTGAGTCCTTGTCATGTGACCATTGTGCTTCATATTACTATTAGGGTTTGAAAAAGGGTTGACGACCACACTTGTCAATATTATTGTTAAGGTTTTTAAAACGGTCGAAGACCAAACTTGTAGCCGTGACGTCGAGGTTTTGTATGTTTGCAAGTGCATTGGAATCACAATAGCAGCCACATCAACCTGATTTGATTGCAATTTTTCTTGTACCAATCAAGGACTAGTGATGTGGCCGCAACAACGATTTGAACTTTGGATATTGCTTCCTAGTCCCTTTTACGTTGAAAACGGCATATTGTATTTATTTTAACCACCTTGATTGTTCATTTGGAAACAACTTGTGTAGTGTATTGGAAACAACTTGTGTAGTGTATTATGATTAATATTTTAGTCTAAAGGAAATGAACTTCACATATTTGTCATGTTTTCCGATTTTTATTTTTGTCATGTTTTCTGATTTTTATTTTCGCTATTTGTTTTATTTGTGGAATCCAGAGAAGTGGGGAAAGCGGTTGGAAAGATAATAGCCCTTGCACTTGATTTAGATGCTGATTTTTTCGATAAGCCGGAAATGCTGGGAGAGCCAATTGCGACTCTACGTTTGCTGCACTATGGAGGTATTGAATCAGTGATCTTGGTGTTTTGTAGTACTTTGTACAGTTATAAAGGAAGATAAGTTATATAGCCATGTTCATCTTTTTGTTTGAAGGTCAAGTATCGGATCCCTTGAAAGGATTATTCGGAGCTGGAGCTCATACCGACTATGGTTTAATTACGCTGTTAGCAACCGATCATGTCTCTGGTCTTCAGGTAAGGATCTGTATGATGTTTCATTCAAGATTATAAATATCTGCTGTAATATCTCAAGCACTGACATAGACACAGAACACGGCATTGACACTAACACATCGGCACCAATAATAATTTGAGAGAATGGAAGTGATTGAATGTAACTACATATGTCGGTGTCGTGTCAGTATTAAATACTGACACATGTCGGACATTGAACTCGTCTTCAATGTGAAATGTCCATACCAGATAATTAAGAATACTTGTCTTTTTTTTGAAAAACGAATACTTGTCTTTTATTGCAGATATGCAAGGATAGGGATGCTAAACCTCAGAAATGGGAGGATGTGGCACCATTGAAAGGGTTAGTCCTTCTGTCTTTGTAGCTTTTATAGGTTACAAATAGGTGTTGCAGTATTGCATGCTAGCAGTAATGAAAATGCTTCATTTATGTTCATCCGAACCTTTTGACTCATGAGTCATGACTCATGAGCTCATTTTTAAAAAATCTCAAGACATGCCGATGTTCCTTCAAGAACATTTTTTTCCTCGATTTGTTTACGTTACTGTCATAGTTTGGCTTTTTTGTTTTCAATTGTTATTCATAAAAAAATATATTACGGGGTCATGTGACAAGTCATACCGTCGGTTCAACAGCATCAAAGTACACCATAGGACCAAACAATTCATCAAAATTACAATTATCTGCATAAGCCAGTATATTTCTAGAACTTTAATTTTTTGTGAGCTGCATTATATCAAGTATGCTGCTACTGTGCTACAACTTATAAGTTTTTTCACCCTGTTCTCCCGAGCTACTTACATTATTTAACTGGTTGCTTTCGTTGCAGGGCATTCGTAGTGAATCTTGGTGACATGCTTGAGCGTTGGAGCAACGGTATTTTCAAGTAAGAAATCTTTCTCACCTTATGGTTTTCTGCGCTCGATTGAGGCAGGCATATTTCTTTCCTTGGAGGAATTTATAAGACAAATCAATAACTTTTAAAAAAAGGTCGTTTTGTGTGATGCTCAGGCACCGGTCGGTGGTATCGCCGCATTGTTGTTATAAAGCACTAAAACAACCTGACTAATGCTTACATTTACACCTAATAATGATAATGATATTTGTTCTTGTTTGTCACAAAGGAAATATTGAAAATATTAAAGTAGTTATGCCATCAGTTATGCTATAGAATTTAGTTTACTTAAAAGTTTGTTAGTATTTTCTACTATACTAATTGTTGTGAGAGATTCCTTGATGACTTGGCTCTTAATGATTTAATAAAAATTTACGTGAGCATATGGTTGATCGAATTCGAATATTTATGAGGGCTTGTAGTCATAAGAACTTGGATCAATTATTTGGTACCTATGTCTTCTTTAAGCTGCTAGAATTAAAATTGTAAGTTACATTGAAGTGAAGAGTGTACTTATCATATTAGTATTTTCATGTGCTATTATGAGACTTTAGTTTCTCTGTGGTATTCTTCTATCATTGACATTCCAGAAACAAATCACAAGACTTAAATATGATAGATAAACAAAGCTAAGTACAACATGTGTATCTTTTTCCATTTAAATTTTATATTTTGTGTACTTAACAATTTGATTTGCATTTATTTTTAGGTCCACACTGCACCGAGTTCTAGGAAATGGTCAAGAGAGATATTCGGTAAGCCTCAGATCTTTTTTCTGGTTCAACATTTTCCTCTTTCGATTTTGATTCTTAATTTTCGTTTCACATTAATTGTCGTTTTAAGTTTCTTCACACAGATTAAGAAAAACAATAAATAGCTTTATAATTTAGTAAATTATCCCTATAAATCGTTGGCGTATCTCAATGTTGGTTCCTTTTACAGATTGCATACTTTTTGGAGCCTAGTCATGATTGTCTCGTGGAGTGCCTACCAACCTGCAAATCAGACACTAACCCTCCCAAGTGAGTTAATAATGACATCTAAAATTTAACACCCTATTATATGCCATGAAGTTAATACCTTAGTCAGATTTCATTCCTTGCTATCAAAACATTGTTTTTTCGGTTAAGACGGTATATTTAAAATTTGTGATTGCAGTCATATCATGGTTGCAATTACAGTGATTTCTGAAATTGCTATAAATGCAATCGACGTAAATGTAGTCTTAACCGCATTGTGATTTTGAAAAATCTTTGTAACCTTAATGTTGCAGCCGCAATTGTCATATACATAAAATGCGCGAAGTTACATTACTAAGACGAGTTTATCTTTATGTTGTTGCAGATATCCTCCTATCTTATGCCGCGACTACCTCAGCCAGCGCTACAATGATACTCATGCTGATTTGAAAATTTACAAGAAACAACAATCATAA
Protein sequence

>MS.gene063300.t1

MGKQSKETESPVSDPTKFSILNLIDLSNPNINQSVNLLKQACLDSGFFYVVNHGISEEFMDEVFEQSKRFFTLPLKEKMKILRNEKHRGYTPVLDELLDPENQLHGDYKEGYYIGVEVDEDDPESDKPFYGPNKWPAPDILPGWRETMEKFHKEALEVGKAVGKIIALALDLDADFFDKPEMLGEPIATLRLLHYGGQVSDPLKGLFGAGAHTDYGLITLLATDHVSGLQICKDRDAKPQKWEDVAPLKGAFVVNLGDMLERWSNGIFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDTNPPKYPPILCRDYLSQRYNDTHADLKIYKKQQS