AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059563

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059563.t1 MTR_6g088665 98.824 340 4 0 1 340 1 340 0.0 697
MS.gene059563.t1 MTR_6g088665 98.534 341 4 1 1 340 1 341 0.0 693
MS.gene059563.t1 MTR_8g102600 73.964 338 77 2 1 338 1 327 0.0 528
MS.gene059563.t1 MTR_8g102600 77.778 279 60 1 60 338 1 277 3.16e-165 462
MS.gene059563.t1 MTR_4g100600 47.896 309 152 3 21 329 9 308 4.58e-106 313
MS.gene059563.t1 MTR_4g100590 46.885 305 148 4 21 325 9 299 4.97e-101 300
MS.gene059563.t1 MTR_4g100590 46.617 266 128 4 60 325 1 252 1.80e-84 256
MS.gene059563.t1 MTR_4g100600 46.087 230 115 3 21 250 9 229 9.08e-66 207
MS.gene059563.t1 MTR_4g087090 31.515 330 193 10 23 335 32 345 1.84e-38 140
MS.gene059563.t1 MTR_1g034060 31.250 320 201 10 25 338 40 346 8.17e-38 138
MS.gene059563.t1 MTR_1g034120 31.646 316 197 10 25 334 40 342 8.34e-38 138
MS.gene059563.t1 MTR_4g087110 31.646 316 191 11 29 334 40 340 2.05e-36 134
MS.gene059563.t1 MTR_4g087100 30.769 312 180 9 31 328 45 334 1.05e-35 132
MS.gene059563.t1 MTR_5g065010 33.000 300 170 9 27 321 50 323 1.01e-33 127
MS.gene059563.t1 MTR_4g087120 30.462 325 196 12 23 333 28 336 1.56e-33 127
MS.gene059563.t1 MTR_1g034140 29.787 329 207 9 4 324 10 322 1.57e-33 127
MS.gene059563.t1 MTR_3g092890 31.293 294 177 11 7 297 23 294 5.02e-32 122
MS.gene059563.t1 MTR_4g087140 30.719 306 181 11 31 324 45 331 7.49e-32 122
MS.gene059563.t1 MTR_3g070860 30.488 328 188 13 8 320 35 337 7.57e-32 122
MS.gene059563.t1 MTR_4g100610 35.470 234 103 7 21 230 9 218 1.97e-30 115
MS.gene059563.t1 MTR_8g074050 30.392 306 183 14 20 320 54 334 2.24e-30 118
MS.gene059563.t1 MTR_8g030880 27.812 320 188 9 21 327 10 299 2.44e-30 117
MS.gene059563.t1 MTR_5g082750 29.967 307 188 11 20 320 51 336 3.26e-30 118
MS.gene059563.t1 MTR_4g074130 30.035 283 166 9 20 297 42 297 3.30e-30 118
MS.gene059563.t1 MTR_2g437380 30.225 311 185 10 6 312 46 328 1.10e-28 114
MS.gene059563.t1 MTR_7g062570 28.963 328 195 11 16 332 53 353 3.14e-28 112
MS.gene059563.t1 MTR_1g011580 30.619 307 179 12 19 321 61 337 1.03e-27 111
MS.gene059563.t1 MTR_7g077670 27.915 283 184 6 46 327 36 299 1.12e-27 110
MS.gene059563.t1 MTR_8g024120 27.362 307 200 7 21 326 45 329 1.50e-27 110
MS.gene059563.t1 MTR_1g070120 30.968 310 184 9 23 326 40 325 2.11e-27 110
MS.gene059563.t1 MTR_4g015790 29.333 300 171 12 33 320 80 350 2.35e-27 110
MS.gene059563.t1 MTR_7g102820 28.435 313 181 6 17 312 66 352 2.40e-27 110
MS.gene059563.t1 MTR_8g009160 27.541 305 189 9 24 322 68 346 2.89e-27 110
MS.gene059563.t1 MTR_1g062110 29.412 306 181 6 17 312 65 345 3.14e-27 110
MS.gene059563.t1 MTR_2g069010 26.821 302 188 7 32 325 85 361 4.18e-27 110
MS.gene059563.t1 MTR_8g009170 28.261 322 190 9 21 331 65 356 6.08e-27 109
MS.gene059563.t1 MTR_2g102570 29.483 329 182 13 12 324 43 337 6.21e-27 109
MS.gene059563.t1 MTR_7g062580 28.659 328 196 12 16 332 53 353 9.72e-27 108
MS.gene059563.t1 MTR_8g074070 30.097 309 186 14 20 321 54 339 1.03e-26 108
MS.gene059563.t1 MTR_2g083030 27.937 315 182 12 21 328 42 318 1.21e-26 108
MS.gene059563.t1 MTR_8g009080 29.010 293 177 10 35 322 113 379 1.29e-26 109
MS.gene059563.t1 MTR_7g451860 27.795 331 188 14 11 329 34 325 1.70e-26 107
MS.gene059563.t1 MTR_7g047670 27.795 331 188 14 11 329 34 325 1.70e-26 107
MS.gene059563.t1 MTR_3g072810 30.519 308 188 10 23 326 42 327 1.77e-26 107
MS.gene059563.t1 MTR_3g088745 28.659 328 211 8 6 331 32 338 2.10e-26 107
MS.gene059563.t1 MTR_5g059130 29.755 326 202 9 7 326 28 332 2.28e-26 107
MS.gene059563.t1 MTR_3g083370 29.909 331 182 13 18 338 4 294 3.40e-26 106
MS.gene059563.t1 MTR_8g093930 26.014 296 201 7 37 331 69 347 8.68e-26 106
MS.gene059563.t1 MTR_4g093840 29.126 309 190 9 23 327 70 353 9.85e-26 106
MS.gene059563.t1 MTR_2g025120 28.254 315 181 10 18 321 4 284 1.31e-25 105
MS.gene059563.t1 MTR_7g068650 29.874 318 187 14 14 320 50 342 1.42e-25 105
MS.gene059563.t1 MTR_3g063180 29.193 322 199 12 13 325 36 337 2.36e-25 105
MS.gene059563.t1 MTR_7g062600 30.183 328 184 13 26 338 59 356 3.17e-25 104
MS.gene059563.t1 MTR_5g032880 29.697 330 190 12 12 326 367 669 3.51e-25 106
MS.gene059563.t1 MTR_5g032880 27.303 304 199 7 23 325 40 322 1.23e-22 99.4
MS.gene059563.t1 MTR_2g072890 29.210 291 180 12 38 325 73 340 3.85e-25 104
MS.gene059563.t1 MTR_3g088565 30.032 313 177 11 23 322 5 288 4.89e-25 103
MS.gene059563.t1 MTR_5g005570 29.907 321 174 13 21 329 37 318 5.11e-25 103
MS.gene059563.t1 MTR_7g062550 28.869 336 197 11 16 338 58 364 5.55e-25 104
MS.gene059563.t1 MTR_8g075890 30.108 279 172 8 21 297 44 301 6.94e-25 103
MS.gene059563.t1 MTR_3g117485 28.387 310 192 12 16 320 50 334 7.43e-25 103
MS.gene059563.t1 MTR_5g055680 28.173 323 186 11 12 320 38 328 8.92e-25 103
MS.gene059563.t1 MTR_1g070080 27.414 321 205 9 20 337 40 335 9.11e-25 103
MS.gene059563.t1 MTR_1g070135 27.941 340 207 11 11 336 23 338 9.68e-25 103
MS.gene059563.t1 MTR_6g015950 30.225 311 177 11 12 312 31 311 9.80e-25 102
MS.gene059563.t1 MTR_1g081840 30.195 308 185 11 32 331 70 355 1.10e-24 103
MS.gene059563.t1 MTR_1g102070 26.630 368 217 12 1 333 14 363 1.32e-24 103
MS.gene059563.t1 MTR_5g022020 28.990 307 193 11 24 327 47 331 1.87e-24 102
MS.gene059563.t1 MTR_2g068950 26.910 301 187 8 32 324 79 354 2.60e-24 102
MS.gene059563.t1 MTR_8g062600 26.426 333 192 11 12 323 56 356 2.84e-24 102
MS.gene059563.t1 MTR_1g093110 26.543 324 201 9 13 325 62 359 3.37e-24 102
MS.gene059563.t1 MTR_8g009090 27.869 305 188 10 24 322 68 346 3.78e-24 101
MS.gene059563.t1 MTR_1g033810 30.375 293 164 10 38 320 68 330 4.23e-24 101
MS.gene059563.t1 MTR_0032s0040 27.698 278 173 7 16 289 66 319 4.68e-24 101
MS.gene059563.t1 MTR_7g081710 29.747 316 190 12 12 321 43 332 5.25e-24 101
MS.gene059563.t1 MTR_8g028435 27.419 310 193 10 20 322 62 346 5.52e-24 101
MS.gene059563.t1 MTR_2g068960 26.910 301 187 8 32 324 79 354 6.62e-24 101
MS.gene059563.t1 MTR_5g055900 27.389 314 200 11 12 320 38 328 7.22e-24 100
MS.gene059563.t1 MTR_1g070085 28.182 330 200 11 20 339 39 341 7.33e-24 100
MS.gene059563.t1 MTR_1g070085 28.182 330 200 11 20 339 39 341 7.33e-24 100
MS.gene059563.t1 MTR_8g009110 27.961 304 190 10 24 322 68 347 8.55e-24 100
MS.gene059563.t1 MTR_5g032870 28.254 315 191 8 21 326 43 331 1.43e-23 99.8
MS.gene059563.t1 MTR_2g072910 28.912 294 177 12 38 325 72 339 1.43e-23 100
MS.gene059563.t1 MTR_4g087130 27.273 319 210 9 25 339 38 338 1.71e-23 99.8
MS.gene059563.t1 MTR_3g096500 28.859 298 190 9 23 313 68 350 3.18e-23 99.4
MS.gene059563.t1 MTR_3g058610 28.041 296 186 9 36 327 59 331 4.17e-23 98.6
MS.gene059563.t1 MTR_3g040410 28.247 308 181 10 30 329 22 297 4.33e-23 98.2
MS.gene059563.t1 MTR_2g019370 28.528 326 191 10 23 334 30 327 7.15e-23 97.8
MS.gene059563.t1 MTR_5g085330 29.305 331 188 15 18 338 5 299 7.31e-23 97.4
MS.gene059563.t1 MTR_3g072820 28.115 313 190 8 23 326 44 330 8.40e-23 97.4
MS.gene059563.t1 MTR_7g029655 26.724 348 206 13 11 339 55 372 1.28e-22 97.4
MS.gene059563.t1 MTR_2g070870 29.688 320 195 12 19 334 26 319 1.57e-22 96.7
MS.gene059563.t1 MTR_1g048940 26.019 319 195 8 16 321 40 330 1.58e-22 97.1
MS.gene059563.t1 MTR_7g016090 26.780 295 188 8 23 313 43 313 1.99e-22 96.7
MS.gene059563.t1 MTR_8g075830 28.464 267 168 8 33 297 56 301 2.28e-22 96.7
MS.gene059563.t1 MTR_7g016090 26.159 302 195 8 16 313 34 311 2.34e-22 96.3
MS.gene059563.t1 MTR_8g461330 28.197 305 162 10 23 300 29 303 2.38e-22 96.3
MS.gene059563.t1 MTR_2g083000 28.528 326 189 13 10 327 23 312 2.59e-22 95.9
MS.gene059563.t1 MTR_8g074070 29.450 309 169 14 20 321 54 320 3.09e-22 95.9
MS.gene059563.t1 MTR_5g048550 26.280 293 188 11 38 326 66 334 3.99e-22 95.9
MS.gene059563.t1 MTR_1g032140 28.213 319 177 10 24 326 69 351 4.49e-22 95.9
MS.gene059563.t1 MTR_0009s0480 27.215 316 202 11 12 322 37 329 6.99e-22 95.1
MS.gene059563.t1 MTR_3g091350 28.963 328 198 14 21 339 64 365 7.05e-22 95.5
MS.gene059563.t1 MTR_2g068840 28.435 313 197 11 24 329 58 350 7.25e-22 95.5
MS.gene059563.t1 MTR_3g117420 28.094 299 191 10 20 315 54 331 7.73e-22 95.1
MS.gene059563.t1 MTR_8g009120 28.025 314 175 10 20 322 62 335 8.18e-22 95.1
MS.gene059563.t1 MTR_2g069060 28.956 297 182 12 32 325 65 335 8.87e-22 94.7
MS.gene059563.t1 MTR_0328s0030 27.178 287 183 10 38 321 64 327 1.06e-21 94.7
MS.gene059563.t1 MTR_6g464620 28.169 284 184 9 33 313 82 348 1.07e-21 95.1
MS.gene059563.t1 MTR_8g008930 27.451 306 189 11 24 322 68 347 1.11e-21 94.7
MS.gene059563.t1 MTR_4g094900 31.224 237 125 9 18 232 5 225 1.68e-21 92.4
MS.gene059563.t1 MTR_1g093140 25.312 320 193 10 23 326 75 364 2.39e-21 94.0
MS.gene059563.t1 MTR_4g024660 28.165 316 184 12 23 323 69 356 2.48e-21 94.0
MS.gene059563.t1 MTR_5g055690 27.273 319 197 13 12 321 38 330 3.21e-21 93.6
MS.gene059563.t1 MTR_4g116010 29.304 273 166 11 23 291 52 301 3.35e-21 93.2
MS.gene059563.t1 MTR_0009s0050 26.730 318 197 11 12 320 38 328 4.77e-21 92.8
MS.gene059563.t1 MTR_0009s0050 26.730 318 197 11 12 320 38 328 4.78e-21 92.8
MS.gene059563.t1 MTR_5g055820 26.888 331 206 14 12 333 38 341 6.18e-21 92.4
MS.gene059563.t1 MTR_7g016080 27.244 312 183 11 23 326 43 318 7.00e-21 92.0
MS.gene059563.t1 MTR_5g048570 27.273 319 200 12 11 320 31 326 8.75e-21 92.0
MS.gene059563.t1 MTR_7g102720 25.868 317 194 8 23 329 39 324 9.00e-21 92.0
MS.gene059563.t1 MTR_8g064200 27.931 290 171 10 41 321 75 335 9.79e-21 92.0
MS.gene059563.t1 MTR_2g069190 26.586 331 201 10 3 322 54 353 1.06e-20 92.0
MS.gene059563.t1 MTR_8g064200 27.835 291 172 10 40 321 79 340 1.27e-20 91.7
MS.gene059563.t1 MTR_2g437380 30.385 260 148 12 60 312 1 234 1.32e-20 90.1
MS.gene059563.t1 MTR_4g117880 27.832 309 190 11 20 320 62 345 1.40e-20 91.7
MS.gene059563.t1 MTR_2g069090 26.235 324 188 11 20 325 67 357 1.76e-20 91.7
MS.gene059563.t1 MTR_3g043900 25.000 328 199 9 13 329 51 342 1.86e-20 91.3
MS.gene059563.t1 MTR_3g117485 27.899 276 169 12 50 320 12 262 2.69e-20 89.7
MS.gene059563.t1 MTR_4g123020 25.309 324 206 8 20 334 19 315 4.28e-20 89.7
MS.gene059563.t1 MTR_8g469400 28.213 319 185 12 21 323 53 343 5.87e-20 89.7
MS.gene059563.t1 MTR_8g033380 26.481 287 188 7 31 313 70 337 1.52e-19 89.0
MS.gene059563.t1 MTR_2g069210 26.518 313 194 11 20 322 63 349 2.04e-19 88.6
MS.gene059563.t1 MTR_1g070085 30.952 210 128 8 135 339 66 263 3.03e-19 86.3
MS.gene059563.t1 MTR_3g026150 30.314 287 170 15 11 292 52 313 3.04e-19 87.8
MS.gene059563.t1 MTR_8g093980 23.810 294 206 5 21 313 64 340 3.18e-19 87.8
MS.gene059563.t1 MTR_7g056347 27.245 323 176 12 23 322 69 355 3.69e-19 87.8
MS.gene059563.t1 MTR_5g048470 26.573 286 186 9 38 321 73 336 3.87e-19 87.4
MS.gene059563.t1 MTR_1g070110 37.324 142 80 3 189 326 84 220 4.03e-19 85.5
MS.gene059563.t1 MTR_5g048850 27.622 286 181 12 40 322 68 330 4.11e-19 87.4
MS.gene059563.t1 MTR_2g069300 26.433 314 194 12 20 322 53 340 4.52e-19 87.4
MS.gene059563.t1 MTR_1g070100 31.068 206 127 8 135 338 62 254 6.99e-19 85.1
MS.gene059563.t1 MTR_5g048740 27.469 324 192 13 12 322 36 329 9.60e-19 86.3
MS.gene059563.t1 MTR_1g093120 25.387 323 200 12 16 326 63 356 9.96e-19 86.7
MS.gene059563.t1 MTR_1g032220 27.010 311 189 8 24 325 76 357 1.03e-18 86.3
MS.gene059563.t1 MTR_8g041620 27.211 294 182 8 38 325 92 359 1.16e-18 86.3
MS.gene059563.t1 MTR_5g059140 26.667 315 196 7 7 310 26 316 1.33e-18 85.9
MS.gene059563.t1 MTR_7g063730 28.107 338 197 14 3 326 46 351 1.59e-18 85.9
MS.gene059563.t1 MTR_5g011250 26.855 283 180 9 38 314 70 331 1.92e-18 85.5
MS.gene059563.t1 MTR_2g069020 27.393 303 186 11 32 327 83 358 2.99e-18 85.1
MS.gene059563.t1 MTR_1g070185 26.897 290 184 9 35 322 86 349 3.13e-18 85.1
MS.gene059563.t1 MTR_2g069020 27.393 303 186 11 32 327 83 358 3.91e-18 85.1
MS.gene059563.t1 MTR_4g011720 25.962 312 191 9 18 321 14 293 4.24e-18 84.0
MS.gene059563.t1 MTR_4g021380 26.625 323 212 11 7 326 4 304 7.28e-18 83.2
MS.gene059563.t1 MTR_8g041600 27.551 294 181 8 38 325 92 359 7.32e-18 84.0
MS.gene059563.t1 MTR_7g105070 26.899 316 184 11 23 325 61 342 7.35e-18 84.0
MS.gene059563.t1 MTR_7g045650 30.888 259 149 12 20 274 62 294 8.47e-18 83.2
MS.gene059563.t1 MTR_8g009170 27.419 248 143 7 21 261 65 282 1.20e-17 82.4
MS.gene059563.t1 MTR_3g045230 35.484 124 74 3 208 329 224 343 1.38e-17 83.2
MS.gene059563.t1 MTR_5g027230 28.378 296 167 11 38 324 23 282 2.04e-17 82.0
MS.gene059563.t1 MTR_1g043775 28.660 321 186 14 3 312 41 329 2.38e-17 82.4
MS.gene059563.t1 MTR_3g091360 27.719 285 177 10 11 294 53 309 2.88e-17 82.0
MS.gene059563.t1 MTR_2g033270 26.994 326 194 13 21 332 19 314 4.45e-17 81.3
MS.gene059563.t1 MTR_3g464530 26.568 271 161 12 38 298 47 289 6.18e-17 80.9
MS.gene059563.t1 MTR_4g132770 39.200 125 64 5 201 321 39 155 7.76e-17 77.4
MS.gene059563.t1 MTR_1g043810 27.673 318 191 12 5 312 41 329 1.58e-16 80.1
MS.gene059563.t1 MTR_7g078010 28.274 336 194 13 8 327 56 360 2.86e-16 79.3
MS.gene059563.t1 MTR_4g021360 25.517 290 194 9 38 325 31 300 4.70e-16 78.2
MS.gene059563.t1 MTR_8g063070 24.468 282 174 9 23 294 69 321 4.84e-16 78.6
MS.gene059563.t1 MTR_1g032250 37.190 121 68 3 208 325 242 357 5.49e-16 78.6
MS.gene059563.t1 MTR_4g115990 27.393 303 174 12 39 335 59 321 6.38e-16 77.8
MS.gene059563.t1 MTR_3g083370 29.249 253 136 10 18 261 4 222 7.82e-16 76.3
MS.gene059563.t1 MTR_5g024940 27.419 310 171 9 24 329 9 268 1.29e-15 76.6
MS.gene059563.t1 MTR_1g043760 26.398 322 194 11 4 312 37 328 1.34e-15 77.4
MS.gene059563.t1 MTR_5g025090 26.452 310 189 11 23 326 7 283 1.88e-15 76.3
MS.gene059563.t1 MTR_7g062560 25.220 341 193 12 3 326 44 339 2.15e-15 76.6
MS.gene059563.t1 MTR_7g056353 31.313 198 119 6 136 325 144 332 2.98e-15 77.0
MS.gene059563.t1 MTR_5g025050 28.000 275 161 10 20 289 4 246 2.98e-15 75.5
MS.gene059563.t1 MTR_7g056393 27.647 340 185 15 9 325 57 358 3.47e-15 76.3
MS.gene059563.t1 MTR_1g043770 27.609 297 158 14 14 292 47 304 3.48e-15 75.9
MS.gene059563.t1 MTR_6g092620 26.871 294 166 11 23 301 5 264 4.63e-15 75.1
MS.gene059563.t1 MTR_8g006930 25.444 338 208 10 2 325 51 358 5.29e-15 75.5
MS.gene059563.t1 MTR_8g009180 29.187 209 116 8 136 322 78 276 5.94e-15 74.7
MS.gene059563.t1 MTR_2g069060 26.792 265 162 10 3 261 9 247 6.30e-15 73.9
MS.gene059563.t1 MTR_2g025120 26.877 253 142 8 18 261 4 222 6.63e-15 73.2
MS.gene059563.t1 MTR_3g108520 25.387 323 215 12 7 326 4 303 9.71e-15 74.3
MS.gene059563.t1 MTR_0009s0050 29.146 199 122 6 128 320 45 230 1.38e-14 73.2
MS.gene059563.t1 MTR_0009s0050 36.134 119 69 3 204 320 35 148 1.39e-14 71.2
MS.gene059563.t1 MTR_0009s0050 29.146 199 122 6 128 320 45 230 1.53e-14 72.8
MS.gene059563.t1 MTR_4g119410 28.125 320 186 11 20 325 69 358 6.71e-14 72.4
MS.gene059563.t1 MTR_0009s0480 27.559 254 157 10 12 261 37 267 7.85e-14 71.2
MS.gene059563.t1 MTR_0056s0160 27.723 202 123 9 132 326 34 219 8.12e-14 70.5
MS.gene059563.t1 MTR_2g072910 30.568 229 128 11 38 261 72 274 8.68e-14 70.9
MS.gene059563.t1 MTR_0009s0400 34.746 118 70 3 206 321 13 125 1.40e-13 67.8
MS.gene059563.t1 MTR_2g068800 25.581 258 149 8 24 276 58 277 2.89e-13 69.7
MS.gene059563.t1 MTR_3g026150 28.030 264 164 12 66 326 4 244 4.26e-13 68.6
MS.gene059563.t1 MTR_1g027290 23.411 299 191 8 34 321 48 319 1.10e-12 68.6
MS.gene059563.t1 MTR_8g041600 27.111 225 137 6 38 261 92 290 1.96e-12 67.4
MS.gene059563.t1 MTR_5g025060 28.272 191 116 6 139 324 83 257 2.16e-12 67.0
MS.gene059563.t1 MTR_5g048850 26.786 224 139 10 40 261 68 268 2.04e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059563.t1 AT1G35190 72.360 322 88 1 17 338 8 328 2.82e-175 489
MS.gene059563.t1 AT1G35190 68.944 322 76 2 17 338 8 305 6.20e-167 467
MS.gene059563.t1 AT3G46490 66.361 327 108 2 7 333 4 328 1.42e-164 462
MS.gene059563.t1 AT3G46500 61.424 337 118 4 1 337 1 325 2.14e-160 451
MS.gene059563.t1 AT3G46490 66.078 283 94 2 7 289 4 284 1.61e-138 395
MS.gene059563.t1 AT3G46480 57.567 337 91 4 1 337 1 285 1.47e-133 382
MS.gene059563.t1 AT3G46500 58.763 291 108 4 1 291 1 279 6.50e-128 368
MS.gene059563.t1 AT3G46500 62.934 259 88 3 79 337 1 251 1.01e-127 366
MS.gene059563.t1 AT3G46500 62.934 259 88 3 79 337 1 251 1.01e-127 366
MS.gene059563.t1 AT3G46500 57.915 259 77 3 79 337 1 227 3.18e-112 325
MS.gene059563.t1 AT3G46500 66.842 190 62 1 148 337 1 189 2.45e-99 291
MS.gene059563.t1 AT3G46500 59.624 213 78 3 79 291 1 205 2.52e-95 282
MS.gene059563.t1 AT4G16765 49.206 252 121 2 79 330 1 245 1.68e-85 258
MS.gene059563.t1 AT4G16765 49.206 252 121 2 79 330 1 245 1.68e-85 258
MS.gene059563.t1 AT4G16765 49.206 252 121 2 79 330 1 245 1.68e-85 258
MS.gene059563.t1 AT3G46500 58.639 191 71 3 79 269 1 183 1.12e-82 249
MS.gene059563.t1 AT4G16765 49.573 234 111 2 79 312 1 227 2.27e-78 239
MS.gene059563.t1 AT3G46500 63.448 145 52 1 147 291 31 174 1.58e-67 211
MS.gene059563.t1 AT3G46500 63.448 145 52 1 147 291 31 174 1.58e-67 211
MS.gene059563.t1 AT4G16770 43.697 238 121 3 21 255 22 249 8.30e-65 206
MS.gene059563.t1 AT4G16765 47.644 191 93 2 79 269 1 184 8.70e-57 182
MS.gene059563.t1 AT4G16765 57.258 124 53 0 207 330 76 199 2.02e-52 172
MS.gene059563.t1 AT3G50210 34.056 323 167 13 16 313 3 304 8.48e-43 151
MS.gene059563.t1 AT3G50210 34.056 323 167 13 16 313 3 304 8.48e-43 151
MS.gene059563.t1 AT3G50210 34.056 323 167 13 16 313 3 304 8.48e-43 151
MS.gene059563.t1 AT3G49630 33.333 318 165 12 19 313 7 300 6.57e-40 143
MS.gene059563.t1 AT3G49630 34.122 296 161 11 28 313 25 296 7.89e-40 143
MS.gene059563.t1 AT3G49620 31.715 309 169 11 19 304 32 321 4.06e-37 137
MS.gene059563.t1 AT3G19010 32.573 307 182 10 15 312 25 315 1.70e-35 132
MS.gene059563.t1 AT3G19010 32.573 307 182 10 15 312 25 315 1.70e-35 132
MS.gene059563.t1 AT5G24530 31.757 296 169 12 11 297 22 293 1.95e-33 126
MS.gene059563.t1 AT5G05600 32.404 287 168 11 38 320 85 349 8.26e-32 122
MS.gene059563.t1 AT3G11180 31.944 288 168 12 38 320 114 378 5.48e-30 118
MS.gene059563.t1 AT3G11180 32.292 288 167 12 38 320 114 378 6.36e-30 118
MS.gene059563.t1 AT4G21200 28.834 326 187 13 6 328 38 321 3.55e-29 115
MS.gene059563.t1 AT3G19010 30.293 307 159 11 15 312 25 285 5.90e-29 114
MS.gene059563.t1 AT5G08640 29.102 323 188 9 21 331 43 336 8.24e-29 114
MS.gene059563.t1 AT5G08640 29.102 323 188 9 21 331 43 336 8.24e-29 114
MS.gene059563.t1 AT3G21420 31.561 301 175 12 20 312 57 334 1.61e-28 114
MS.gene059563.t1 AT4G25420 31.119 286 166 9 23 297 63 328 2.29e-28 113
MS.gene059563.t1 AT2G38240 29.592 294 182 10 33 322 61 333 2.68e-27 110
MS.gene059563.t1 AT2G36690 29.934 304 177 8 17 312 60 335 3.74e-27 110
MS.gene059563.t1 AT2G36690 29.934 304 177 8 17 312 60 335 3.74e-27 110
MS.gene059563.t1 AT3G13610 28.617 311 194 11 23 329 64 350 6.05e-27 109
MS.gene059563.t1 AT1G12010 30.645 310 179 12 17 321 6 284 7.01e-27 108
MS.gene059563.t1 AT5G51810 29.682 283 172 9 23 298 65 327 1.22e-26 108
MS.gene059563.t1 AT1G05010 31.348 319 170 12 18 321 4 288 1.24e-26 107
MS.gene059563.t1 AT1G78550 29.333 300 179 12 1 297 44 313 3.64e-26 107
MS.gene059563.t1 AT3G50210 37.173 191 104 8 127 313 44 222 4.40e-26 104
MS.gene059563.t1 AT1G17020 32.453 265 155 11 27 288 63 306 6.78e-26 106
MS.gene059563.t1 AT4G25300 31.461 267 154 12 27 288 62 304 6.79e-26 106
MS.gene059563.t1 AT5G63600 29.276 304 188 5 23 324 35 313 9.37e-26 105
MS.gene059563.t1 AT5G43935 28.618 304 177 9 23 324 21 286 2.19e-25 103
MS.gene059563.t1 AT1G78440 28.529 333 206 12 11 334 7 316 3.18e-25 104
MS.gene059563.t1 AT3G55970 30.282 284 174 10 33 312 70 333 3.85e-25 104
MS.gene059563.t1 AT3G19000 30.742 283 172 10 38 312 54 320 4.05e-25 104
MS.gene059563.t1 AT5G63600 29.180 305 188 6 23 324 35 314 1.15e-24 102
MS.gene059563.t1 AT4G23340 28.662 314 192 9 21 327 10 298 2.43e-24 101
MS.gene059563.t1 AT1G17010 28.135 327 198 11 7 322 40 340 3.22e-24 102
MS.gene059563.t1 AT4G10490 28.808 302 174 10 11 297 25 300 3.62e-24 101
MS.gene059563.t1 AT1G55290 28.479 309 197 10 23 329 64 350 4.47e-24 101
MS.gene059563.t1 AT1G80340 26.462 325 202 12 21 336 50 346 5.32e-24 101
MS.gene059563.t1 AT5G20400 30.169 295 181 11 21 312 50 322 6.84e-24 100
MS.gene059563.t1 AT1G62380 28.889 315 178 12 17 321 6 284 7.16e-24 100
MS.gene059563.t1 AT1G30040 28.571 336 213 10 8 338 19 332 9.74e-24 100
MS.gene059563.t1 AT3G49630 31.301 246 137 10 76 313 6 227 1.38e-23 98.2
MS.gene059563.t1 AT4G21690 26.074 326 203 11 23 336 49 348 4.71e-23 98.6
MS.gene059563.t1 AT5G54000 29.934 304 186 11 17 315 45 326 5.31e-23 98.6
MS.gene059563.t1 AT1G15550 26.269 335 212 10 13 339 49 356 1.56e-22 97.1
MS.gene059563.t1 AT5G58660 25.000 272 189 4 37 298 46 312 4.74e-22 95.9
MS.gene059563.t1 AT1G77330 28.313 332 187 13 20 338 5 298 7.32e-22 94.4
MS.gene059563.t1 AT4G10500 27.273 286 171 7 20 297 46 302 1.10e-21 94.7
MS.gene059563.t1 AT1G06640 25.589 297 187 9 33 322 82 351 1.13e-21 95.1
MS.gene059563.t1 AT5G59530 26.710 307 187 10 24 320 66 344 1.23e-21 94.7
MS.gene059563.t1 AT3G47190 27.119 295 177 7 38 323 45 310 1.55e-21 94.0
MS.gene059563.t1 AT5G43450 27.500 320 194 12 15 322 51 344 1.69e-21 94.4
MS.gene059563.t1 AT1G49390 29.603 277 170 11 21 294 50 304 3.01e-21 93.6
MS.gene059563.t1 AT1G78550 29.297 256 155 11 45 297 3 235 3.28e-21 92.0
MS.gene059563.t1 AT5G63590 28.247 308 185 8 23 320 16 297 5.63e-21 92.0
MS.gene059563.t1 AT5G54000 30.224 268 162 10 51 315 1 246 5.90e-21 91.3
MS.gene059563.t1 AT4G22880 28.896 308 183 11 38 339 70 347 7.50e-21 92.4
MS.gene059563.t1 AT4G22880 28.896 308 183 11 38 339 70 347 7.50e-21 92.4
MS.gene059563.t1 AT4G22880 28.896 308 183 11 38 339 70 347 7.50e-21 92.4
MS.gene059563.t1 AT5G20550 30.035 283 170 13 38 315 67 326 7.65e-21 92.4
MS.gene059563.t1 AT3G12900 26.452 310 201 10 24 329 59 345 8.78e-21 92.4
MS.gene059563.t1 AT1G80330 26.984 315 191 15 23 325 51 338 1.07e-20 92.0
MS.gene059563.t1 AT1G60980 26.523 279 172 7 31 298 73 329 1.64e-20 91.7
MS.gene059563.t1 AT1G50960 25.387 323 186 11 21 328 40 322 2.49e-20 90.5
MS.gene059563.t1 AT5G59540 28.082 292 179 10 35 320 80 346 2.81e-20 90.9
MS.gene059563.t1 AT1G03410 27.336 289 174 7 46 334 87 339 5.92e-20 90.1
MS.gene059563.t1 AT1G49390 30.364 247 147 11 51 294 1 225 6.27e-20 88.6
MS.gene059563.t1 AT1G03410 27.336 289 174 7 46 334 124 376 6.54e-20 90.1
MS.gene059563.t1 AT3G51240 28.736 261 161 9 40 297 62 300 9.24e-20 89.4
MS.gene059563.t1 AT4G16330 25.649 308 197 12 24 326 70 350 1.14e-19 89.4
MS.gene059563.t1 AT3G19010 29.020 255 157 9 15 261 25 263 1.22e-19 88.2
MS.gene059563.t1 AT1G47990 27.483 302 177 10 23 311 17 289 2.14e-19 87.8
MS.gene059563.t1 AT5G51310 28.671 286 159 11 21 288 5 263 3.41e-19 87.4
MS.gene059563.t1 AT2G34555 28.832 274 172 9 20 291 26 278 3.67e-19 87.4
MS.gene059563.t1 AT4G25310 29.457 258 152 12 35 288 70 301 7.83e-19 86.7
MS.gene059563.t1 AT1G52820 25.305 328 207 10 21 335 12 314 1.36e-18 85.5
MS.gene059563.t1 AT5G07200 26.148 283 164 9 32 298 75 328 1.38e-18 86.3
MS.gene059563.t1 AT2G30840 28.197 305 166 11 35 323 78 345 2.18e-18 85.5
MS.gene059563.t1 AT1G06650 23.906 297 194 8 32 322 81 351 2.75e-18 85.1
MS.gene059563.t1 AT1G04380 25.338 296 187 8 35 326 61 326 3.70e-18 84.7
MS.gene059563.t1 AT1G06620 26.838 272 168 10 46 312 92 337 5.25e-18 84.3
MS.gene059563.t1 AT1G04350 25.857 321 202 11 9 320 47 340 1.57e-17 82.8
MS.gene059563.t1 AT5G05600 30.396 227 133 10 38 261 85 289 2.66e-17 81.3
MS.gene059563.t1 AT2G30830 28.391 317 158 13 38 328 77 350 3.01e-17 82.0
MS.gene059563.t1 AT5G63595 25.172 290 160 9 23 303 27 268 3.73e-17 80.9
MS.gene059563.t1 AT3G19000 27.706 231 144 8 38 261 54 268 7.42e-17 80.1
MS.gene059563.t1 AT2G19590 27.622 286 174 9 20 301 13 269 1.15e-16 79.7
MS.gene059563.t1 AT2G44800 24.695 328 206 12 16 328 50 351 1.18e-16 80.5
MS.gene059563.t1 AT3G61400 25.914 301 176 10 46 334 95 360 3.75e-16 79.0
MS.gene059563.t1 AT1G02400 25.155 322 191 9 23 326 26 315 5.78e-16 78.2
MS.gene059563.t1 AT2G30840 27.869 305 161 12 35 323 78 339 5.84e-16 78.2
MS.gene059563.t1 AT5G43450 26.667 255 153 10 15 261 51 279 1.28e-15 76.6
MS.gene059563.t1 AT3G55970 29.310 232 141 9 33 261 70 281 1.36e-15 76.6
MS.gene059563.t1 AT5G12270 25.625 320 196 10 23 329 58 348 1.68e-15 77.0
MS.gene059563.t1 AT4G25310 28.906 256 128 12 35 288 70 273 2.76e-15 75.9
MS.gene059563.t1 AT1G03400 25.704 284 161 10 15 286 50 295 9.96e-15 74.7
MS.gene059563.t1 AT4G16330 27.551 196 126 6 132 326 64 244 1.20e-14 73.2
MS.gene059563.t1 AT4G23340 33.884 121 75 2 208 327 64 180 2.01e-14 71.6
MS.gene059563.t1 AT3G51240 32.335 167 101 6 133 297 60 216 2.13e-14 72.8
MS.gene059563.t1 AT4G25300 36.242 149 81 6 144 288 72 210 2.23e-14 72.4
MS.gene059563.t1 AT1G06640 23.810 231 147 7 33 261 82 285 4.50e-14 72.4
MS.gene059563.t1 AT1G06640 23.581 229 146 7 33 259 82 283 1.37e-13 70.5
MS.gene059563.t1 AT2G25450 26.910 301 178 10 35 326 74 341 2.22e-13 70.9
MS.gene059563.t1 AT1G06645 23.529 306 179 12 33 322 95 361 1.30e-12 68.6
MS.gene059563.t1 AT1G52820 25.000 248 153 8 21 260 12 234 8.19e-12 65.1
MS.gene059563.t1 AT1G06650 22.078 231 153 6 32 261 81 285 2.61e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAAGGGTTTATCTGATTC+TGG 0.185968 6.4:+61803279 None:intergenic
TTTAAGGCATGTTTGGATTC+TGG 0.186194 6.4:-61803840 MS.gene059563:intron
CCATTTATTAGGCCCATAAA+AGG 0.223494 6.4:+61803263 None:intergenic
ATTGGTTCTCCCAGCATTTC+CGG 0.256490 6.4:+61802187 None:intergenic
TACAAAGAGGGGTATTATAT+TGG 0.274004 6.4:-61803324 MS.gene059563:CDS
TGGGTTAGTGTCTGATTTGC+AGG 0.293569 6.4:+61800116 None:intergenic
TGGTGTGTAGATACTCTTCC+AGG 0.296796 6.4:-61803127 MS.gene059563:intron
TTAACGGATTGGTTTATGTT+TGG 0.323726 6.4:+61803998 None:intergenic
ATCCGTTAATTTACTCAAAC+AGG 0.324872 6.4:-61803984 MS.gene059563:intron
CGATCATGTCTCTGGTCTTC+AGG 0.326775 6.4:-61801972 MS.gene059563:intron
TCCACACTGCACCGAGTTCT+AGG 0.336338 6.4:-61800433 MS.gene059563:CDS
CCTGGTGCAGGCCATTTATT+AGG 0.354989 6.4:+61803252 None:intergenic
AACCTGTTTGAGTAAATTAA+CGG 0.361508 6.4:+61803982 None:intergenic
TCCAGGGTGGAGGGAGACTA+TGG 0.363830 6.4:-61803110 MS.gene059563:CDS
GATCCTGAAAATCAACTTCA+TGG 0.371484 6.4:-61803660 MS.gene059563:intron
GATCCCTTGAAAGGTTTATT+CGG 0.373409 6.4:-61802040 MS.gene059563:CDS
GGGATGCTAAACCTCAGAAA+TGG 0.380576 6.4:-61801665 MS.gene059563:CDS
TTTCGATAAGCCGGAAATGC+TGG 0.406273 6.4:-61802197 MS.gene059563:CDS
TGGAATTAGTGAGGAATTCA+TGG 0.407317 6.4:-61803796 MS.gene059563:CDS
GCTGGAGCTCATACCGACTA+TGG 0.409650 6.4:-61802016 MS.gene059563:CDS
TTTAACTCTTTACCTGGTGC+AGG 0.428299 6.4:+61803240 None:intergenic
TCAAGTAACTCATCAAGAAC+AGG 0.432111 6.4:+61803681 None:intergenic
AGGTAGTCGCGGCATAAGAT+AGG 0.433152 6.4:+61799755 None:intergenic
ACTCTACGTTTGCTGCACTA+TGG 0.433278 6.4:-61802160 MS.gene059563:CDS
AAAAGGGTTTATCTGATTCT+GGG 0.434184 6.4:+61803280 None:intergenic
TTGAAAGGTTTATTCGGAGC+TGG 0.461864 6.4:-61802034 MS.gene059563:CDS
CTGCACCGAGTTCTAGGAAA+TGG 0.462191 6.4:-61800427 MS.gene059563:CDS
TATTGCAGATATGCAAGGAT+AGG 0.463971 6.4:-61801686 MS.gene059563:intron
AGCTCCGAATAAACCTTTCA+AGG 0.464837 6.4:+61802036 None:intergenic
AGGGCATTCGTAGTGAATCT+TGG 0.468286 6.4:-61801183 MS.gene059563:CDS
TTGAAAGATCGATGAGATTG+AGG 0.469498 6.4:+61804023 None:intergenic
TAGATACTCTTCCAGGGTGG+AGG 0.479050 6.4:-61803120 MS.gene059563:CDS
TTAGCAACCGATCATGTCTC+TGG 0.480639 6.4:-61801980 MS.gene059563:CDS
CAAGTAGGGGATTACAAAGA+GGG 0.487078 6.4:-61803336 MS.gene059563:intron
ATTGCAGATATGCAAGGATA+GGG 0.488243 6.4:-61801685 MS.gene059563:intron
GTTTGAGTAAATTAACGGAT+TGG 0.490107 6.4:+61803987 None:intergenic
AAATGGTCAAGAGAGATATT+CGG 0.495720 6.4:-61800410 MS.gene059563:intron
CCTAATAAATGGCCTGCACC+AGG 0.499540 6.4:-61803252 MS.gene059563:intron
ACCTCAGAAATGGGAGGATG+TGG 0.502188 6.4:-61801655 MS.gene059563:CDS
CATGAGTATCATTGTAGCGC+TGG 0.508781 6.4:+61799729 None:intergenic
TAGTGAGGAATTCATGGATG+AGG 0.509057 6.4:-61803790 MS.gene059563:CDS
GGATGCTAAACCTCAGAAAT+GGG 0.512864 6.4:-61801664 MS.gene059563:CDS
GCCACATCCTCCCATTTCTG+AGG 0.519372 6.4:+61801654 None:intergenic
TGAATTCCTCACTAATTCCA+TGG 0.519515 6.4:+61803799 None:intergenic
TTCGATAAGCCGGAAATGCT+GGG 0.521365 6.4:-61802196 MS.gene059563:CDS
CTTGACCATTTCCTAGAACT+CGG 0.522617 6.4:+61800422 None:intergenic
CATTTATTAGGCCCATAAAA+GGG 0.522621 6.4:+61803264 None:intergenic
TTTCTATGAAGGTCAAGTAT+CGG 0.527658 6.4:-61802062 MS.gene059563:intron
TCCATAGTCTCCCTCCACCC+TGG 0.530739 6.4:+61803109 None:intergenic
AGCAAACGTAGAGTCGCAAT+TGG 0.540643 6.4:+61802169 None:intergenic
CAAGTATCGGATCCCTTGAA+AGG 0.546295 6.4:-61802049 MS.gene059563:CDS
GAGGATGTGGCACCATTGAA+AGG 0.546910 6.4:-61801642 MS.gene059563:CDS
TATCATTGTAGCGCTGGCTG+AGG 0.552591 6.4:+61799735 None:intergenic
TTTGCGGAATCCAGAGAAGT+GGG 0.555217 6.4:-61802271 MS.gene059563:intron
AGAGAAGTGGGGAAAGCAGT+TGG 0.556302 6.4:-61802259 MS.gene059563:CDS
CAGCATCTAAATCAAGCGCA+AGG 0.561048 6.4:+61802224 None:intergenic
AGAAGGACTAACCCTTTCAA+TGG 0.563794 6.4:+61801630 None:intergenic
ATGCTTGAGCGTTGGAGCAA+CGG 0.565008 6.4:-61801156 MS.gene059563:CDS
TTGGTGACATGCTTGAGCGT+TGG 0.574643 6.4:-61801164 MS.gene059563:CDS
TTAGTGTCTGATTTGCAGGT+TGG 0.576527 6.4:+61800120 None:intergenic
TCAAGTAGGGGATTACAAAG+AGG 0.579771 6.4:-61803337 MS.gene059563:intron
GCCTAGTCATGATTGTCTCG+TGG 0.580777 6.4:-61800151 MS.gene059563:CDS
AGGATGTGGCACCATTGAAA+GGG 0.581832 6.4:-61801641 MS.gene059563:intron
ATTTGCGGAATCCAGAGAAG+TGG 0.586515 6.4:-61802272 MS.gene059563:intron
CAGCGTAATTAAACCATAGT+CGG 0.587832 6.4:+61802003 None:intergenic
CAAGTAACTCATCAAGAACA+GGG 0.589749 6.4:+61803682 None:intergenic
AGATACTCTTCCAGGGTGGA+GGG 0.601970 6.4:-61803119 MS.gene059563:CDS
GCTCCGAATAAACCTTTCAA+GGG 0.602244 6.4:+61802037 None:intergenic
TAGTCGCGGCATAAGATAGG+AGG 0.627608 6.4:+61799758 None:intergenic
AGCATCTAAATCAAGCGCAA+GGG 0.628457 6.4:+61802225 None:intergenic
CTACGTTTGCTGCACTATGG+AGG 0.629326 6.4:-61802157 MS.gene059563:intron
AGCGCTGGCTGAGGTAGTCG+CGG 0.640629 6.4:+61799744 None:intergenic
GGTGTGTAGATACTCTTCCA+GGG 0.651696 6.4:-61803126 MS.gene059563:intron
TCCACGAGACAATCATGACT+AGG 0.659102 6.4:+61800150 None:intergenic
TCCTAGAACTCGGTGCAGTG+TGG 0.660565 6.4:+61800432 None:intergenic
TGTAAACCATGGAATTAGTG+AGG 0.660905 6.4:-61803805 MS.gene059563:CDS
CTGAAGACCAGAGACATGAT+CGG 0.665054 6.4:+61801973 None:intergenic
AAGTAGGGGATTACAAAGAG+GGG 0.671792 6.4:-61803335 MS.gene059563:intron
TGCTAAACCTCAGAAATGGG+AGG 0.675789 6.4:-61801661 MS.gene059563:CDS
GTGTAGATACTCTTCCAGGG+TGG 0.678542 6.4:-61803123 MS.gene059563:intron
TTGCGGAATCCAGAGAAGTG+GGG 0.687234 6.4:-61802270 MS.gene059563:intron
AAGTAACTCATCAAGAACAG+GGG 0.720593 6.4:+61803683 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTGTGTTTTTTTTA+AGG - chr6.4:61799920-61799939 MS.gene059563:intron 10.0%
!!! TATGAAATTAGTATTTTATT+TGG - chr6.4:61800592-61800611 MS.gene059563:intron 10.0%
!! CAAATATCATTATCATTATT+AGG + chr6.4:61802852-61802871 None:intergenic 15.0%
!! TAAAAAAAATTACCTTTAAG+AGG - chr6.4:61800555-61800574 MS.gene059563:intron 15.0%
!! TAGTTTACTTAAAAATTTGT+CGG - chr6.4:61802949-61802968 MS.gene059563:intron 15.0%
!!! ATTAGTTTTACAATCAAATT+AGG + chr6.4:61803445-61803464 None:intergenic 15.0%
!!! TATTGTTAAGGTTTTTAAAA+TGG - chr6.4:61801147-61801166 MS.gene059563:CDS 15.0%
!!! TGATTAATATTTTAGTCTAA+AGG - chr6.4:61801425-61801444 MS.gene059563:intron 15.0%
!! AAATTCTATAACATAACTGA+TGG + chr6.4:61802930-61802949 None:intergenic 20.0%
!! AACTACTTACATTATTTAAC+TGG - chr6.4:61802557-61802576 MS.gene059563:intron 20.0%
!! AAGAAAAAAAATGTTCTTGA+AGG + chr6.4:61802276-61802295 None:intergenic 20.0%
!! AAGTTTCTTAACACAAATTA+AGG - chr6.4:61803496-61803515 MS.gene059563:intron 20.0%
!! ATATTCTTAACTATCTAGTA+CGG + chr6.4:61802062-61802081 None:intergenic 20.0%
!! GTTAAATAATGTAAGTAGTT+CGG + chr6.4:61802557-61802576 None:intergenic 20.0%
!! TAATTTCCTAATGCATAATA+CGG + chr6.4:61803722-61803741 None:intergenic 20.0%
!! TGTATACATACATAAAATGT+TGG - chr6.4:61803948-61803967 MS.gene059563:intron 20.0%
!! TTAAATAATGTAAGTAGTTC+GGG + chr6.4:61802556-61802575 None:intergenic 20.0%
!! TTTAAACACATCAAATAATG+CGG + chr6.4:61800249-61800268 None:intergenic 20.0%
!!! AAACTTTTTGTTATTTTGAC+TGG - chr6.4:61800412-61800431 MS.gene059563:CDS 20.0%
!!! ATATTGTTTTCAACGTAAAA+GGG + chr6.4:61801344-61801363 None:intergenic 20.0%
!!! ATTCCATTTTTGCAAATTAT+TGG - chr6.4:61800854-61800873 MS.gene059563:intron 20.0%
!!! ATTTTTTTTAACTCTTTACC+TGG + chr6.4:61800545-61800564 None:intergenic 20.0%
!!! GAATATTTGCTAGAATTATT+TGG - chr6.4:61803071-61803090 MS.gene059563:intron 20.0%
!!! GATCATTTGTTTTTTCAAAT+TGG - chr6.4:61800958-61800977 MS.gene059563:intron 20.0%
!!! TAATTTTTTCTGTACTTTGT+TGG - chr6.4:61800629-61800648 MS.gene059563:intron 20.0%
!!! TATATTGTTTTCAACGTAAA+AGG + chr6.4:61801345-61801364 None:intergenic 20.0%
!!! TGATTTTTGAAATTACTATG+TGG - chr6.4:61803848-61803867 MS.gene059563:intron 20.0%
!!! TGTAATTTTGATGAATTGTT+TGG + chr6.4:61802425-61802444 None:intergenic 20.0%
!!! TTCCATTTTTGCAAATTATT+GGG - chr6.4:61800855-61800874 MS.gene059563:intron 20.0%
!!! TTTGATTTGCATTTATTTTC+AGG - chr6.4:61803320-61803339 MS.gene059563:CDS 20.0%
! AACCTGTTTGAGTAAATTAA+CGG + chr6.4:61799797-61799816 None:intergenic 25.0%
! ACCAACTTATTGTACTTTAT+AGG - chr6.4:61800990-61801009 MS.gene059563:intron 25.0%
! ACTTGTCGATATTATTGTTA+AGG - chr6.4:61801135-61801154 MS.gene059563:intron 25.0%
! AGAAAAATTGCAATCAAATC+AGG + chr6.4:61801256-61801275 None:intergenic 25.0%
! CCAATAATAATTTGAGAGAA+TGG - chr6.4:61801948-61801967 MS.gene059563:intron 25.0%
! CCATTCTCTCAAATTATTAT+TGG + chr6.4:61801951-61801970 None:intergenic 25.0%
! GCTTCTTCATATTACTATTA+GGG - chr6.4:61801089-61801108 MS.gene059563:intron 25.0%
! TACTATTAGGGTTTGAAAAA+CGG - chr6.4:61801101-61801120 MS.gene059563:intron 25.0%
! TATAAATGTATGCATTAGTC+TGG + chr6.4:61802829-61802848 None:intergenic 25.0%
! TATTCTTAACTATCTAGTAC+GGG + chr6.4:61802061-61802080 None:intergenic 25.0%
! TCCTATAAAGTACAATAAGT+TGG + chr6.4:61800994-61801013 None:intergenic 25.0%
! TGCTTCTTCATATTACTATT+AGG - chr6.4:61801088-61801107 MS.gene059563:intron 25.0%
! TTACATAGCGAAATCTTAAT+CGG + chr6.4:61800373-61800392 None:intergenic 25.0%
! TTGAATGTAACTACATATGT+CGG - chr6.4:61801977-61801996 MS.gene059563:CDS 25.0%
! TTGAGAAATGAAAAACATAG+AGG - chr6.4:61800065-61800084 MS.gene059563:intron 25.0%
!! AAAAGTATGCAATCTGTAAA+AGG + chr6.4:61803601-61803620 None:intergenic 25.0%
!! AATCAGATAAACCCTTTTAT+GGG - chr6.4:61800501-61800520 MS.gene059563:intron 25.0%
!! AATCAGATTTTTCCTCTTAA+AGG + chr6.4:61800570-61800589 None:intergenic 25.0%
!! AATTTTTCTTGTACCAATCA+AGG - chr6.4:61801267-61801286 MS.gene059563:intron 25.0%
!! AGCTTTTATAGGTTACAAAA+AGG - chr6.4:61802177-61802196 MS.gene059563:CDS 25.0%
!! TTTACAGATTGCATACTTTT+TGG - chr6.4:61803601-61803620 MS.gene059563:intron 25.0%
!! TTTGTTCTTGTTTGTCATAA+AGG - chr6.4:61802868-61802887 MS.gene059563:intron 25.0%
!! TTTTTCTATGTTGTAAACCA+TGG - chr6.4:61799960-61799979 MS.gene059563:intron 25.0%
!!! ATTTAATTTGTATGCACTGT+AGG - chr6.4:61800185-61800204 MS.gene059563:intron 25.0%
!!! TCCATTTTTGCAAATTATTG+GGG - chr6.4:61800856-61800875 MS.gene059563:intron 25.0%
!!! TGTTTTTTTTAAGGCATGTT+TGG - chr6.4:61799929-61799948 MS.gene059563:intron 25.0%
AAAAGGGTTTATCTGATTCT+GGG + chr6.4:61800499-61800518 None:intergenic 30.0%
AAATGGTCAAGAGAGATATT+CGG - chr6.4:61803366-61803385 MS.gene059563:intron 30.0%
AAATTATCCCTGTTAATCGT+TGG - chr6.4:61803557-61803576 MS.gene059563:intron 30.0%
AACAATAATATCGACAAGTG+TGG + chr6.4:61801134-61801153 None:intergenic 30.0%
AATCATTGTAACCAAACACA+TGG + chr6.4:61801039-61801058 None:intergenic 30.0%
AGTGCTTTATAACAACAATG+CGG + chr6.4:61802799-61802818 None:intergenic 30.0%
ATAAAAGCTACAAAGACAGA+AGG + chr6.4:61802166-61802185 None:intergenic 30.0%
ATAAACAATCCTTGAATGGA+AGG + chr6.4:61803766-61803785 None:intergenic 30.0%
ATCCGTTAATTTACTCAAAC+AGG - chr6.4:61799792-61799811 MS.gene059563:intron 30.0%
ATTGTAACCACATTGTGATT+TGG - chr6.4:61803885-61803904 MS.gene059563:intron 30.0%
CATTTATTAGGCCCATAAAA+GGG + chr6.4:61800515-61800534 None:intergenic 30.0%
CCAAATAAACAATCCTTGAA+TGG + chr6.4:61803770-61803789 None:intergenic 30.0%
CCATTCAAGGATTGTTTATT+TGG - chr6.4:61803767-61803786 MS.gene059563:CDS 30.0%
GACTAAAAAGTCAAAAGGTT+CGG + chr6.4:61802254-61802273 None:intergenic 30.0%
GATTCCGCAAATAAAACAAA+TGG + chr6.4:61801496-61801515 None:intergenic 30.0%
GCTATATTCATTCATTGATG+CGG - chr6.4:61800281-61800300 MS.gene059563:intron 30.0%
GTTTATTTGGTTAAGACACT+AGG - chr6.4:61803780-61803799 MS.gene059563:CDS 30.0%
TAAAAGGGTTTATCTGATTC+TGG + chr6.4:61800500-61800519 None:intergenic 30.0%
TGAAGGACTAAAAAGTCAAA+AGG + chr6.4:61802259-61802278 None:intergenic 30.0%
TGATTCCAAATGAACAATCA+AGG + chr6.4:61801386-61801405 None:intergenic 30.0%
TGTCGTACTTTGTACAATAA+AGG - chr6.4:61801662-61801681 MS.gene059563:CDS 30.0%
TGTTGGAAGTTACATTACTA+AGG - chr6.4:61803965-61803984 MS.gene059563:intron 30.0%
TTGTCTTATAAATTCCTCCA+AGG + chr6.4:61802715-61802734 None:intergenic 30.0%
TTTCTATGAAGGTCAAGTAT+CGG - chr6.4:61801714-61801733 MS.gene059563:intron 30.0%
! AAGAAATCTTTCTCACCTTT+TGG - chr6.4:61802654-61802673 MS.gene059563:intron 30.0%
! ACCCCAATAATTTGCAAAAA+TGG + chr6.4:61800860-61800879 None:intergenic 30.0%
! ACGCCTTTAATTTAAAGTGT+CGG + chr6.4:61800771-61800790 None:intergenic 30.0%
! ATCTTCATCTTTTCCTTCAA+AGG + chr6.4:61800044-61800063 None:intergenic 30.0%
! CTTGGCTCTTAATGATTTAA+TGG - chr6.4:61803018-61803037 MS.gene059563:intron 30.0%
! GAATCAGATAAACCCTTTTA+TGG - chr6.4:61800500-61800519 MS.gene059563:intron 30.0%
! GATTTTTCCAAATCACAATG+TGG + chr6.4:61803895-61803914 None:intergenic 30.0%
! GTTTGAGTAAATTAACGGAT+TGG + chr6.4:61799792-61799811 None:intergenic 30.0%
! TAAGTCTTGTGATTTCTTTC+TGG + chr6.4:61803220-61803239 None:intergenic 30.0%
! TCTGTCTTTGTAGCTTTTAT+AGG - chr6.4:61802166-61802185 MS.gene059563:CDS 30.0%
! TCTTTTATTGCAGATATGCA+AGG - chr6.4:61802085-61802104 MS.gene059563:intron 30.0%
! TGAGGATAGAGAATTTTGTT+GGG + chr6.4:61799738-61799757 None:intergenic 30.0%
! TTGAGGATAGAGAATTTTGT+TGG + chr6.4:61799739-61799758 None:intergenic 30.0%
!! TACAAAGAGGGGTATTATAT+TGG - chr6.4:61800452-61800471 MS.gene059563:intron 30.0%
!! TTAACGGATTGGTTTATGTT+TGG + chr6.4:61799781-61799800 None:intergenic 30.0%
!! TTACCATGAAGTTGATTTTC+AGG + chr6.4:61800122-61800141 None:intergenic 30.0%
!!! TTCGCCATTTGTTTTATTTG+CGG - chr6.4:61801489-61801508 MS.gene059563:intron 30.0%
!!! TTTGACTGGTTTTTCAAGTA+GGG - chr6.4:61800426-61800445 MS.gene059563:CDS 30.0%
!!! TTTTGACTGGTTTTTCAAGT+AGG - chr6.4:61800425-61800444 MS.gene059563:CDS 30.0%
AAAACAAAACATCGACGTCA+CGG + chr6.4:61801192-61801211 None:intergenic 35.0%
AACGACCTTGATTGTTCATT+TGG - chr6.4:61801378-61801397 MS.gene059563:intron 35.0%
AAGTAACTCATCAAGAACAG+GGG + chr6.4:61800096-61800115 None:intergenic 35.0%
AATGGAAATTTATGTGCCTC+TGG - chr6.4:61803036-61803055 MS.gene059563:intron 35.0%
ACTGACATAGACAAAGAACA+CGG - chr6.4:61801903-61801922 MS.gene059563:intron 35.0%
ATGGTTCATGTAAGACAGTT+AGG + chr6.4:61801020-61801039 None:intergenic 35.0%
ATTGCAGATATGCAAGGATA+GGG - chr6.4:61802091-61802110 MS.gene059563:intron 35.0%
CAAGTAACTCATCAAGAACA+GGG + chr6.4:61800097-61800116 None:intergenic 35.0%
CAGCGTAATTAAACCATAGT+CGG + chr6.4:61801776-61801795 None:intergenic 35.0%
CCATTTATTAGGCCCATAAA+AGG + chr6.4:61800516-61800535 None:intergenic 35.0%
GATCCCTTGAAAGGTTTATT+CGG - chr6.4:61801736-61801755 MS.gene059563:intron 35.0%
GATCCTGAAAATCAACTTCA+TGG - chr6.4:61800116-61800135 MS.gene059563:CDS 35.0%
GATTTCATTCCTTCCATTCA+AGG - chr6.4:61803754-61803773 MS.gene059563:CDS 35.0%
TAACATAACTGATGGAGTGA+TGG + chr6.4:61802922-61802941 None:intergenic 35.0%
TATTGCAGATATGCAAGGAT+AGG - chr6.4:61802090-61802109 MS.gene059563:intron 35.0%
TCAAGTAACTCATCAAGAAC+AGG + chr6.4:61800098-61800117 None:intergenic 35.0%
TCTTACATGAACCATGTGTT+TGG - chr6.4:61801025-61801044 MS.gene059563:intron 35.0%
TGAACCAGAAAAAAGATCCA+AGG + chr6.4:61803396-61803415 None:intergenic 35.0%
TGAATTCCTCACTAATTCCA+TGG + chr6.4:61799980-61799999 None:intergenic 35.0%
TGAGTAATACTGACATGTGT+CGG - chr6.4:61802007-61802026 MS.gene059563:CDS 35.0%
TGATGAATTGTTTGGTCCTA+TGG + chr6.4:61802417-61802436 None:intergenic 35.0%
TGGAATTAGTGAGGAATTCA+TGG - chr6.4:61799980-61799999 MS.gene059563:intron 35.0%
TGTAAACCATGGAATTAGTG+AGG - chr6.4:61799971-61799990 MS.gene059563:intron 35.0%
TTAGCACCGTATTATGCATT+AGG - chr6.4:61803713-61803732 MS.gene059563:CDS 35.0%
TTGAAAGATCGATGAGATTG+AGG + chr6.4:61799756-61799775 None:intergenic 35.0%
TTGTGATTCCAATACAGTTG+CGG + chr6.4:61801218-61801237 None:intergenic 35.0%
! AATTTTGTTGGGTCAGAAAC+AGG + chr6.4:61799727-61799746 None:intergenic 35.0%
! ATTTTGTTGGGTCAGAAACA+GGG + chr6.4:61799726-61799745 None:intergenic 35.0%
! ATTTTTCACCCTTCCTTTGA+AGG - chr6.4:61800028-61800047 MS.gene059563:intron 35.0%
! CATCTTTTCCTTCAAAGGAA+GGG + chr6.4:61800039-61800058 None:intergenic 35.0%
! CCTTTTATGGGCCTAATAAA+TGG - chr6.4:61800513-61800532 MS.gene059563:intron 35.0%
! CTTTAAATTAAAGGCGTGTC+TGG - chr6.4:61800774-61800793 MS.gene059563:intron 35.0%
! GCACCGACACTTTAAATTAA+AGG - chr6.4:61800765-61800784 MS.gene059563:intron 35.0%
! GTGCTCATCTTTTTCTATGA+AGG - chr6.4:61801703-61801722 MS.gene059563:intron 35.0%
! TCATCTTTTCCTTCAAAGGA+AGG + chr6.4:61800040-61800059 None:intergenic 35.0%
! TTGTGACCTACATTTTGTGT+CGG - chr6.4:61800895-61800914 MS.gene059563:intron 35.0%
! TTTAAGGCATGTTTGGATTC+TGG - chr6.4:61799936-61799955 MS.gene059563:intron 35.0%
! TTTTCAACGTAAAAGGGACT+GGG + chr6.4:61801338-61801357 None:intergenic 35.0%
!!! GTTTTTTTCCGCAACTGTAT+TGG - chr6.4:61801207-61801226 MS.gene059563:intron 35.0%
!!! TAAGCCTTGGATCTTTTTTC+TGG - chr6.4:61803389-61803408 MS.gene059563:intron 35.0%
!!! TGCTGATTTTTTCGATAAGC+CGG - chr6.4:61801570-61801589 MS.gene059563:intron 35.0%
!!! TTGACTGGTTTTTCAAGTAG+GGG - chr6.4:61800427-61800446 MS.gene059563:CDS 35.0%
AAGAGCCAAGTCTATCATCA+AGG + chr6.4:61803008-61803027 None:intergenic 40.0%
AAGTAGGGGATTACAAAGAG+GGG - chr6.4:61800441-61800460 MS.gene059563:intron 40.0%
ACCAATCAAGGATAGTGATG+TGG - chr6.4:61801279-61801298 MS.gene059563:intron 40.0%
AGAAGGACTAACCCTTTCAA+TGG + chr6.4:61802149-61802168 None:intergenic 40.0%
AGCATCTAAATCAAGCGCAA+GGG + chr6.4:61801554-61801573 None:intergenic 40.0%
AGCTCCGAATAAACCTTTCA+AGG + chr6.4:61801743-61801762 None:intergenic 40.0%
AGGCATATTTCTTTCCTTGG+AGG - chr6.4:61802698-61802717 MS.gene059563:intron 40.0%
ATGTAAGTAGTTCGGGAGAA+CGG + chr6.4:61802549-61802568 None:intergenic 40.0%
ATTCGAATTCGATCAACCAG+AGG + chr6.4:61803055-61803074 None:intergenic 40.0%
CAAGTAGGGGATTACAAAGA+GGG - chr6.4:61800440-61800459 MS.gene059563:intron 40.0%
CTTGACCATTTCCTAGAACT+CGG + chr6.4:61803357-61803376 None:intergenic 40.0%
GCTCCGAATAAACCTTTCAA+GGG + chr6.4:61801742-61801761 None:intergenic 40.0%
GGATGCTAAACCTCAGAAAT+GGG - chr6.4:61802112-61802131 MS.gene059563:intron 40.0%
GTCAACAATGTACGCAATTG+TGG - chr6.4:61803916-61803935 MS.gene059563:intron 40.0%
TAGTGAGGAATTCATGGATG+AGG - chr6.4:61799986-61800005 MS.gene059563:intron 40.0%
TCAAGTAGGGGATTACAAAG+AGG - chr6.4:61800439-61800458 MS.gene059563:intron 40.0%
TGCAACAGCGATTTAAACCT+TGG - chr6.4:61801303-61801322 MS.gene059563:intron 40.0%
TTGAAAGGTTTATTCGGAGC+TGG - chr6.4:61801742-61801761 MS.gene059563:intron 40.0%
TTTAACTCTTTACCTGGTGC+AGG + chr6.4:61800539-61800558 None:intergenic 40.0%
TTTACGTGACTGTCATAGCT+TGG - chr6.4:61802302-61802321 MS.gene059563:intron 40.0%
! AACTGGTTGCATTTGTTGCA+GGG - chr6.4:61802574-61802593 MS.gene059563:intron 40.0%
! AGAGTCCTTGATGATAGACT+TGG - chr6.4:61803000-61803019 MS.gene059563:intron 40.0%
! GGAAGGCATATTTCTTTCCT+TGG - chr6.4:61802695-61802714 MS.gene059563:intron 40.0%
! GTTTTCAACGTAAAAGGGAC+TGG + chr6.4:61801339-61801358 None:intergenic 40.0%
! TAACTGGTTGCATTTGTTGC+AGG - chr6.4:61802573-61802592 MS.gene059563:intron 40.0%
! TTAGTGTCTGATTTGCAGGT+TGG + chr6.4:61803659-61803678 None:intergenic 40.0%
! TTTTGTTGGGTCAGAAACAG+GGG + chr6.4:61799725-61799744 None:intergenic 40.0%
!! AAAGCACCGACACAAAATGT+AGG + chr6.4:61800904-61800923 None:intergenic 40.0%
!! GCAATCAAATCAGGTTGATG+TGG + chr6.4:61801247-61801266 None:intergenic 40.0%
ACAGCATCAAAGTGCACCAT+AGG - chr6.4:61802398-61802417 MS.gene059563:intron 45.0%
AGACACGCCAACGATTAACA+GGG + chr6.4:61803567-61803586 None:intergenic 45.0%
AGCAAACGTAGAGTCGCAAT+TGG + chr6.4:61801610-61801629 None:intergenic 45.0%
AGGATGTGGCACCATTGAAA+GGG - chr6.4:61802135-61802154 MS.gene059563:intron 45.0%
ATCGAGCGCAGAAAACCAAA+AGG + chr6.4:61802672-61802691 None:intergenic 45.0%
ATTTGCGGAATCCAGAGAAG+TGG - chr6.4:61801504-61801523 MS.gene059563:intron 45.0%
CAGCATCTAAATCAAGCGCA+AGG + chr6.4:61801555-61801574 None:intergenic 45.0%
CATGAGTATCATTGTAGCGC+TGG + chr6.4:61804050-61804069 None:intergenic 45.0%
CATGTGACAAGTCATACCGT+CGG - chr6.4:61802371-61802390 MS.gene059563:intron 45.0%
CTGAAGACCAGAGACATGAT+CGG + chr6.4:61801806-61801825 None:intergenic 45.0%
CTTTGATGCTGTTGAACCGA+CGG + chr6.4:61802390-61802409 None:intergenic 45.0%
GAGAGATATTCGGTAAGCCT+TGG - chr6.4:61803376-61803395 MS.gene059563:intron 45.0%
GCAAAACGAACACATGACAC+AGG + chr6.4:61801071-61801090 None:intergenic 45.0%
GCCACATCACTATCCTTGAT+TGG + chr6.4:61801283-61801302 None:intergenic 45.0%
GGGATGCTAAACCTCAGAAA+TGG - chr6.4:61802111-61802130 MS.gene059563:intron 45.0%
GGTGTGTAGATACTCTTCCA+GGG - chr6.4:61800650-61800669 MS.gene059563:intron 45.0%
TACTGACATGTGTCGGACAT+TGG - chr6.4:61802014-61802033 MS.gene059563:CDS 45.0%
TCCACGAGACAATCATGACT+AGG + chr6.4:61803629-61803648 None:intergenic 45.0%
TGCTAAACCTCAGAAATGGG+AGG - chr6.4:61802115-61802134 MS.gene059563:intron 45.0%
TGGTGTGTAGATACTCTTCC+AGG - chr6.4:61800649-61800668 MS.gene059563:intron 45.0%
TGTAAGTAGTTCGGGAGAAC+GGG + chr6.4:61802548-61802567 None:intergenic 45.0%
TGTCTGGTATCCACATGTGT+TGG - chr6.4:61800790-61800809 MS.gene059563:intron 45.0%
TTAGCAACCGATCATGTCTC+TGG - chr6.4:61801796-61801815 MS.gene059563:intron 45.0%
TTCGATAAGCCGGAAATGCT+GGG - chr6.4:61801580-61801599 MS.gene059563:intron 45.0%
TTGTGACTGCGATCATGTCA+TGG - chr6.4:61803811-61803830 MS.gene059563:CDS 45.0%
TTTCGATAAGCCGGAAATGC+TGG - chr6.4:61801579-61801598 MS.gene059563:intron 45.0%
TTTGCGGAATCCAGAGAAGT+GGG - chr6.4:61801505-61801524 MS.gene059563:intron 45.0%
TTTGTGTGATGCTCAGTCAC+TGG - chr6.4:61802761-61802780 MS.gene059563:intron 45.0%
! ACTCTACGTTTGCTGCACTA+TGG - chr6.4:61801616-61801635 MS.gene059563:intron 45.0%
! AGGGCATTCGTAGTGAATCT+TGG - chr6.4:61802593-61802612 MS.gene059563:intron 45.0%
! ATGTCTCTGGTCTTCAGGTA+AGG - chr6.4:61801809-61801828 MS.gene059563:intron 45.0%
! ATTGGTTCTCCCAGCATTTC+CGG + chr6.4:61801592-61801611 None:intergenic 45.0%
!! CAAGTATCGGATCCCTTGAA+AGG - chr6.4:61801727-61801746 MS.gene059563:intron 45.0%
!! TGGGTTAGTGTCTGATTTGC+AGG + chr6.4:61803663-61803682 None:intergenic 45.0%
AACTGCTTTCCCCACTTCTC+TGG + chr6.4:61801518-61801537 None:intergenic 50.0%
ACCTCAGAAATGGGAGGATG+TGG - chr6.4:61802121-61802140 MS.gene059563:intron 50.0%
AGAGAAGTGGGGAAAGCAGT+TGG - chr6.4:61801517-61801536 MS.gene059563:intron 50.0%
AGATACTCTTCCAGGGTGGA+GGG - chr6.4:61800657-61800676 MS.gene059563:intron 50.0%
AGGTAGTCGCGGCATAAGAT+AGG + chr6.4:61804024-61804043 None:intergenic 50.0%
CCTAATAAATGGCCTGCACC+AGG - chr6.4:61800524-61800543 MS.gene059563:intron 50.0%
CCTGGTGCAGGCCATTTATT+AGG + chr6.4:61800527-61800546 None:intergenic 50.0%
GAGACACGCCAACGATTAAC+AGG + chr6.4:61803568-61803587 None:intergenic 50.0%
GAGGATGTGGCACCATTGAA+AGG - chr6.4:61802134-61802153 MS.gene059563:intron 50.0%
GCCTAGTCATGATTGTCTCG+TGG - chr6.4:61803625-61803644 MS.gene059563:intron 50.0%
GGACTGGGAAGCAATATCCA+AGG + chr6.4:61801323-61801342 None:intergenic 50.0%
GTAAGTAGTTCGGGAGAACG+GGG + chr6.4:61802547-61802566 None:intergenic 50.0%
GTGTAGATACTCTTCCAGGG+TGG - chr6.4:61800653-61800672 MS.gene059563:intron 50.0%
TAAGTAGTTCGGGAGAACGG+GGG + chr6.4:61802546-61802565 None:intergenic 50.0%
TAGATACTCTTCCAGGGTGG+AGG - chr6.4:61800656-61800675 MS.gene059563:intron 50.0%
TAGTCGCGGCATAAGATAGG+AGG + chr6.4:61804021-61804040 None:intergenic 50.0%
TCGTTGGCGTGTCTCAATGT+TGG - chr6.4:61803573-61803592 MS.gene059563:intron 50.0%
TGTGATGCTCAGTCACTGGT+CGG - chr6.4:61802765-61802784 MS.gene059563:intron 50.0%
TTGCGGAATCCAGAGAAGTG+GGG - chr6.4:61801506-61801525 MS.gene059563:intron 50.0%
TTTCTGCGCTCGATTGAGGA+AGG - chr6.4:61802678-61802697 MS.gene059563:intron 50.0%
! CGATCATGTCTCTGGTCTTC+AGG - chr6.4:61801804-61801823 MS.gene059563:intron 50.0%
! CTACGTTTGCTGCACTATGG+AGG - chr6.4:61801619-61801638 MS.gene059563:intron 50.0%
! TGGTTTTCTGCGCTCGATTG+AGG - chr6.4:61802674-61802693 MS.gene059563:intron 50.0%
! TTGGTGACATGCTTGAGCGT+TGG - chr6.4:61802612-61802631 MS.gene059563:intron 50.0%
!! ATGCTTGAGCGTTGGAGCAA+CGG - chr6.4:61802620-61802639 MS.gene059563:intron 50.0%
!! CGGCGTTGACACTAACACAT+CGG - chr6.4:61801923-61801942 MS.gene059563:intron 50.0%
!! CTGCACCGAGTTCTAGGAAA+TGG - chr6.4:61803349-61803368 MS.gene059563:intron 50.0%
!! TATCATTGTAGCGCTGGCTG+AGG + chr6.4:61804044-61804063 None:intergenic 50.0%
GCCACATCCTCCCATTTCTG+AGG + chr6.4:61802125-61802144 None:intergenic 55.0%
GCGTCTGACACCAACACATG+TGG + chr6.4:61800803-61800822 None:intergenic 55.0%
TCCACACTGCACCGAGTTCT+AGG - chr6.4:61803343-61803362 MS.gene059563:intron 55.0%
! GCTGGAGCTCATACCGACTA+TGG - chr6.4:61801760-61801779 MS.gene059563:intron 55.0%
!! TCCTAGAACTCGGTGCAGTG+TGG + chr6.4:61803347-61803366 None:intergenic 55.0%
CGACGTCACGGCTACAAGTG+TGG + chr6.4:61801180-61801199 None:intergenic 60.0%
GATGCTCAGTCACTGGTCGG+TGG - chr6.4:61802768-61802787 MS.gene059563:intron 60.0%
TCCAGGGTGGAGGGAGACTA+TGG - chr6.4:61800666-61800685 MS.gene059563:intron 60.0%
TCCATAGTCTCCCTCCACCC+TGG + chr6.4:61800670-61800689 None:intergenic 60.0%
!! AGCGCTGGCTGAGGTAGTCG+CGG + chr6.4:61804035-61804054 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 61799694 61804104 61799694 ID=MS.gene059563
chr6.4 mRNA 61799694 61804104 61799694 ID=MS.gene059563.t1;Parent=MS.gene059563
chr6.4 exon 61803985 61804104 61803985 ID=MS.gene059563.t1.exon1;Parent=MS.gene059563.t1
chr6.4 CDS 61803985 61804104 61803985 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61803661 61803856 61803661 ID=MS.gene059563.t1.exon2;Parent=MS.gene059563.t1
chr6.4 CDS 61803661 61803856 61803661 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61803253 61803351 61803253 ID=MS.gene059563.t1.exon3;Parent=MS.gene059563.t1
chr6.4 CDS 61803253 61803351 61803253 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61803088 61803139 61803088 ID=MS.gene059563.t1.exon4;Parent=MS.gene059563.t1
chr6.4 CDS 61803088 61803139 61803088 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61802158 61802279 61802158 ID=MS.gene059563.t1.exon5;Parent=MS.gene059563.t1
chr6.4 CDS 61802158 61802279 61802158 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61801973 61802073 61801973 ID=MS.gene059563.t1.exon6;Parent=MS.gene059563.t1
chr6.4 CDS 61801973 61802073 61801973 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61801642 61801700 61801642 ID=MS.gene059563.t1.exon7;Parent=MS.gene059563.t1
chr6.4 CDS 61801642 61801700 61801642 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61801147 61801203 61801147 ID=MS.gene059563.t1.exon8;Parent=MS.gene059563.t1
chr6.4 CDS 61801147 61801203 61801147 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61800411 61800456 61800411 ID=MS.gene059563.t1.exon9;Parent=MS.gene059563.t1
chr6.4 CDS 61800411 61800456 61800411 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61800111 61800190 61800111 ID=MS.gene059563.t1.exon10;Parent=MS.gene059563.t1
chr6.4 CDS 61800111 61800190 61800111 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
chr6.4 exon 61799694 61799784 61799694 ID=MS.gene059563.t1.exon11;Parent=MS.gene059563.t1
chr6.4 CDS 61799694 61799784 61799694 ID=cds.MS.gene059563.t1;Parent=MS.gene059563.t1
Gene Sequence

>MS.gene059563

ATGGGAAAACAGAGCAAAGAAACAGAATCCCCTGTTTCTGACCCAACAAAATTCTCTATCCTCAATCTCATCGATCTTTCAAATCCAAACATAAACCAATCCGTTAATTTACTCAAACAGGTTTGTTTCAATCATACTTTTCGATATTTCATTCTTAAAAAACAACATGTTTCAATTAAATTTACTCTGTTTTTTACTCTGTTTTTTGTTTTGTTGTAATTAACATTAATTTTTGTGTTTTTTTTAAGGCATGTTTGGATTCTGGTTTTTTCTATGTTGTAAACCATGGAATTAGTGAGGAATTCATGGATGAGGTTTTTGAACAAAGTAAGAGATTTTTCACCCTTCCTTTGAAGGAAAAGATGAAGATTTTGAGAAATGAAAAACATAGAGGATATACCCCTGTTCTTGATGAGTTACTTGATCCTGAAAATCAACTTCATGGTAACACTCTTTTGATTTTATTGCATGTGTTTATCGAGATAGATTCAATTTAATTTGTATGCACTGTAGGTGTAAAATTGTTTTACACATGCATTTAACGATATGTTGCCGCATTATTTGATGTGTTTAAAAGCACATAAATTGCTATATTCATTCATTGATGCGGCAACACGTCATTGAACTAATGTGTAAATTAATTTTACACTGTCAGTGTATAAAAATTAAACTTTTACCGATTAAGATTTCGCTATGTAATTTTTTGAAAAATAATCTCAAACTTTTTGTTATTTTGACTGGTTTTTCAAGTAGGGGATTACAAAGAGGGGTATTATATTGGAGTTGAAGTAGATGAAGATGACCCAGAATCAGATAAACCCTTTTATGGGCCTAATAAATGGCCTGCACCAGGTAAAGAGTTAAAAAAAATTACCTTTAAGAGGAAAAATCTGATTTTTATGAAATTAGTATTTTATTTGGTTTTATTATTTTATTAATTTTTTCTGTACTTTGTTGGTGTGTAGATACTCTTCCAGGGTGGAGGGAGACTATGGAAAAGTTTCATAGAGAAGCATTGTAAGTACAAGTGATGTTATGTTTCTGTAATAAGATTATAAGATGCAGTATGTAGCACCGACACTTTAAATTAAAGGCGTGTCTGGTATCCACATGTGTTGGTGTCAGACGCGACAATGACACATGTGAGATGATATATTATTATTCCATTTTTGCAAATTATTGGGGTGACGACGTGTCAGTGTTGTGACCTACATTTTGTGTCGGTGCTTTCATAGAATGCAACATGCAACTTTGCTACTGTTTTGATCATTTGTTTTTTCAAATTGGAAATGTGTTACCAACTTATTGTACTTTATAGGAAAACCTAACTGTCTTACATGAACCATGTGTTTGGTTACAATGATTTCATTTGAGCCTGTGTCATGTGTTCGTTTTGCTTCTTCATATTACTATTAGGGTTTGAAAAACGGTTGACGACCACACTTGTCGATATTATTGTTAAGGTTTTTAAAATGGTCGAAGACCACACTTGTAGCCGTGACGTCGATGTTTTGTTTTTTTCCGCAACTGTATTGGAATCACAATAGCAGCCACATCAACCTGATTTGATTGCAATTTTTCTTGTACCAATCAAGGATAGTGATGTGGCTGCAACAGCGATTTAAACCTTGGATATTGCTTCCCAGTCCCTTTTACGTTGAAAACAATATATTGTATTTATTTTAACGACCTTGATTGTTCATTTGGAATCAACTTGTGCAGAGTGTATTATGATTAATATTTTAGTCTAAAGGAAAAGAACTTCACTTATTTGTCATATTTTCTGATTTTTATTTTCGCCATTTGTTTTATTTGCGGAATCCAGAGAAGTGGGGAAAGCAGTTGGAAAGATAATAGCCCTTGCGCTTGATTTAGATGCTGATTTTTTCGATAAGCCGGAAATGCTGGGAGAACCAATTGCGACTCTACGTTTGCTGCACTATGGAGGTATTGAGTCAGTGATCTTGTTGTCGTACTTTGTACAATAAAGGAAGATAGATTATATAGCTGTGCTCATCTTTTTCTATGAAGGTCAAGTATCGGATCCCTTGAAAGGTTTATTCGGAGCTGGAGCTCATACCGACTATGGTTTAATTACGCTGTTAGCAACCGATCATGTCTCTGGTCTTCAGGTAAGGATCTGTATGATATTTCATTTAAGATTATAAATATCTGCTGTAATTTCATTAAGAATCTCTCAAGCACTGACACTGACATAGACAAAGAACACGGCGTTGACACTAACACATCGGCACCAATAATAATTTGAGAGAATGGAAGTGATTGAATGTAACTACATATGTCGGTGTTGTGTGAGTAATACTGACATGTGTCGGACATTGGACTCGTCTTCAATGTGAAATGCCCGTACTAGATAGTTAAGAATATTTGTCTTTTATTGCAGATATGCAAGGATAGGGATGCTAAACCTCAGAAATGGGAGGATGTGGCACCATTGAAAGGGTTAGTCCTTCTGTCTTTGTAGCTTTTATAGGTTACAAAAAGGTGTTGCAGTATTGCATGCTAACAGTAATGAAAATGCTTCATTCATGTTCATCCGAACCTTTTGACTTTTTAGTCCTTCAAGAACATTTTTTTTCTTGATTTGTTTACGTGACTGTCATAGCTTGGCTTTTTAGTTTTCAATTGTCATTCATAAAAAACTATATTACGAGATCATGTGACAAGTCATACCGTCGGTTCAACAGCATCAAAGTGCACCATAGGACCAAACAATTCATCAAAATTACAATTTTCTGCATTAGCTAGTATATTTCTAAAACTTTAATTTTTTGTGAGCTTCATTATATAAAGTATGCTGCAACAACTTATAAGTTTTAGTTTTTTCACCCCCGTTCTCCCGAACTACTTACATTATTTAACTGGTTGCATTTGTTGCAGGGCATTCGTAGTGAATCTTGGTGACATGCTTGAGCGTTGGAGCAACGGTGTTTTCAAGTAAGAAATCTTTCTCACCTTTTGGTTTTCTGCGCTCGATTGAGGAAGGCATATTTCTTTCCTTGGAGGAATTTATAAGACAAATCAATAACTTTTAAAAAAAGATTGTTTTGTGTGATGCTCAGTCACTGGTCGGTGGTATCACCGCATTGTTGTTATAAAGCACTAAAACAACCAGACTAATGCATACATTTATACCTAATAATGATAATGATATTTGTTCTTGTTTGTCATAAAGGAAATATTGAAATTATTAAAGTAGTTATACCATCACTCCATCAGTTATGTTATAGAATTTAGTTTACTTAAAAATTTGTCGGTATTTTCTACTATACTAATTGCTGTGAGAGAGTCCTTGATGATAGACTTGGCTCTTAATGATTTAATGGAAATTTATGTGCCTCTGGTTGATCGAATTCGAATATTTGCTAGAATTATTTGGTATCTGTGTCTTCTCTAAGCTTCTAGAATTGAAATTGTAAGCTACAATTGAAGTAGAGAGTGTACTTATCATATTAGTATTTTCATGTGCTATTATGAGACTTTAGTTTCTATCATTGACATTCCAGAAAGAAATCACAAGACTTAAACTTGATAGATAAATACAAATATAAATACAACATGTGTATAATTTTTCATTTAAATTTTATATTTTGTGTAATCAACAATTTGATTTGCATTTATTTTCAGGTCCACACTGCACCGAGTTCTAGGAAATGGTCAAGAGAGATATTCGGTAAGCCTTGGATCTTTTTTCTGGTTCAACATTTTCGTCTTATCGATTTTGATTCCTAATTTGATTGTAAAACTAATACTCGCTTTGTTTCACATTAATTGTCGTTTTAAGTTTCTTAACACAAATTAAGGAAAACAATAAATAGCTTTATAAGTGTAACAACTTTAGTAAATTATCCCTGTTAATCGTTGGCGTGTCTCAATGTTGGTTCCTTTTACAGATTGCATACTTTTTGGAGCCTAGTCATGATTGTCTCGTGGAGTGCTTACCAACCTGCAAATCAGACACTAACCCACCCAAGTGAGTTAAAAATGACATTTAAACTTTAGCACCGTATTATGCATTAGGAAATTAATAGCTTAATCAGATTTCATTCCTTCCATTCAAGGATTGTTTATTTGGTTAAGACACTAGGTTTAAAAATTGTGACTGCGATCATGTCATGGTTACAATTACATTGTGATTTTTGAAATTACTATGTGGTCGATTTGAATGTAATTGTAACCACATTGTGATTTGGAAAAATCTGTCAACAATGTACGCAATTGTGGTTTGCATATTGTATACATACATAAAATGTTGGAAGTTACATTACTAAGGCATGTTTTATCTTTATGTTGTTGCAGATATCCTCCTATCTTATGCCGCGACTACCTCAGCCAGCGCTACAATGATACTCATGCTGATTTGAAAATTTACAAGAAACAACAATCATAA
Protein sequence

>MS.gene059563.t1

MGKQSKETESPVSDPTKFSILNLIDLSNPNINQSVNLLKQACLDSGFFYVVNHGISEEFMDEVFEQSKRFFTLPLKEKMKILRNEKHRGYTPVLDELLDPENQLHGDYKEGYYIGVEVDEDDPESDKPFYGPNKWPAPDTLPGWRETMEKFHREALEVGKAVGKIIALALDLDADFFDKPEMLGEPIATLRLLHYGGQVSDPLKGLFGAGAHTDYGLITLLATDHVSGLQICKDRDAKPQKWEDVAPLKGAFVVNLGDMLERWSNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDTNPPKYPPILCRDYLSQRYNDTHADLKIYKKQQS