Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005504.t1 | RHN81020.1 | 97.3 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 8.90E-269 | 935.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005504.t1 | Q9FZ24 | 47.0 | 451 | 229 | 5 | 29 | 469 | 69 | 519 | 4.5e-112 | 406.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005504.t1 | G7ICW4 | 97.3 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 6.4e-269 | 935.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005504 | MS.gene69362 | PPI |
| MS.gene068116 | MS.gene005504 | PPI |
| MS.gene005504 | MS.gene008863 | PPI |
| MS.gene005504 | MS.gene067938 | PPI |
| MS.gene005504 | MS.gene056432 | PPI |
| MS.gene005504 | MS.gene068108 | PPI |
| MS.gene005504 | MS.gene52807 | PPI |
| MS.gene005504 | MS.gene008871 | PPI |
| MS.gene014383 | MS.gene005504 | PPI |
| MS.gene005504 | MS.gene067932 | PPI |
| MS.gene008872 | MS.gene005504 | PPI |
| MS.gene005504 | MS.gene068115 | PPI |
| MS.gene005504 | MS.gene064795 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005504.t1 | MTR_1g086820 | 97.292 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 0.0 | 974 |
| MS.gene005504.t1 | MTR_8g069570 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 8.02e-93 | 290 |
| MS.gene005504.t1 | MTR_2g013450 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 9.25e-62 | 209 |
| MS.gene005504.t1 | MTR_8g007375 | 32.884 | 371 | 246 | 3 | 93 | 460 | 7 | 377 | 2.24e-59 | 201 |
| MS.gene005504.t1 | MTR_1g072300 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 1.12e-55 | 194 |
| MS.gene005504.t1 | MTR_2g047855 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 2.62e-55 | 192 |
| MS.gene005504.t1 | MTR_8g465890 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 1.62e-54 | 190 |
| MS.gene005504.t1 | MTR_3g099753 | 29.025 | 441 | 296 | 8 | 20 | 450 | 26 | 459 | 1.07e-49 | 177 |
| MS.gene005504.t1 | MTR_3g099753 | 29.025 | 441 | 296 | 8 | 20 | 450 | 50 | 483 | 1.64e-49 | 177 |
| MS.gene005504.t1 | MTR_8g059115 | 28.406 | 345 | 245 | 2 | 100 | 442 | 13 | 357 | 2.99e-46 | 166 |
| MS.gene005504.t1 | MTR_2g090290 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 9.63e-42 | 155 |
| MS.gene005504.t1 | MTR_1g022400 | 30.100 | 299 | 204 | 5 | 46 | 339 | 69 | 367 | 2.01e-41 | 152 |
| MS.gene005504.t1 | MTR_8g031520 | 37.129 | 202 | 123 | 3 | 27 | 224 | 99 | 300 | 2.83e-31 | 122 |
| MS.gene005504.t1 | MTR_7g089770 | 24.060 | 399 | 285 | 12 | 38 | 430 | 163 | 549 | 1.38e-25 | 110 |
| MS.gene005504.t1 | MTR_1g050750 | 23.404 | 423 | 304 | 12 | 29 | 445 | 90 | 498 | 3.57e-24 | 105 |
| MS.gene005504.t1 | MTR_2g096880 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 1.32e-17 | 85.9 |
| MS.gene005504.t1 | MTR_8g098755 | 23.125 | 320 | 232 | 8 | 82 | 392 | 334 | 648 | 1.50e-11 | 67.0 |
| MS.gene005504.t1 | MTR_7g017530 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 2.08e-11 | 67.0 |
| MS.gene005504.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 520 | 828 | 5.49e-11 | 65.5 |
| MS.gene005504.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 8.51e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005504.t1 | AT1G02370 | 42.967 | 519 | 246 | 6 | 1 | 469 | 1 | 519 | 7.15e-144 | 423 |
| MS.gene005504.t1 | AT4G01990 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.55e-128 | 382 |
| MS.gene005504.t1 | AT1G60770 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.68e-89 | 282 |
| MS.gene005504.t1 | AT1G02150 | 34.028 | 432 | 280 | 4 | 33 | 459 | 69 | 500 | 3.77e-76 | 248 |
| MS.gene005504.t1 | AT4G21705 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 2.26e-68 | 227 |
| MS.gene005504.t1 | AT2G20710 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 3.96e-57 | 197 |
| MS.gene005504.t1 | AT4G02820 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 1.50e-54 | 191 |
| MS.gene005504.t1 | AT5G27460 | 29.302 | 430 | 289 | 6 | 12 | 431 | 21 | 445 | 1.27e-53 | 187 |
| MS.gene005504.t1 | AT5G09450 | 31.889 | 323 | 212 | 6 | 25 | 340 | 49 | 370 | 2.40e-48 | 171 |
| MS.gene005504.t1 | AT2G20710 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 2.29e-46 | 166 |
| MS.gene005504.t1 | AT1G28020 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 9.96e-32 | 127 |
| MS.gene005504.t1 | AT1G80270 | 26.882 | 279 | 196 | 7 | 19 | 294 | 118 | 391 | 3.11e-25 | 109 |
| MS.gene005504.t1 | AT1G80270 | 26.882 | 279 | 196 | 7 | 19 | 294 | 118 | 391 | 3.11e-25 | 109 |
| MS.gene005504.t1 | AT1G80270 | 26.882 | 279 | 196 | 7 | 19 | 294 | 118 | 391 | 3.11e-25 | 109 |
| MS.gene005504.t1 | AT1G80270 | 26.882 | 279 | 196 | 7 | 19 | 294 | 118 | 391 | 3.11e-25 | 109 |
| MS.gene005504.t1 | AT1G80270 | 26.882 | 279 | 196 | 7 | 19 | 294 | 118 | 391 | 3.11e-25 | 109 |
| MS.gene005504.t1 | AT1G15480 | 24.451 | 364 | 265 | 7 | 43 | 402 | 138 | 495 | 4.15e-24 | 106 |
| MS.gene005504.t1 | AT3G15590 | 29.600 | 250 | 172 | 4 | 46 | 293 | 156 | 403 | 9.68e-24 | 105 |
| MS.gene005504.t1 | AT3G15590 | 29.600 | 250 | 172 | 4 | 46 | 293 | 156 | 403 | 9.68e-24 | 105 |
| MS.gene005504.t1 | AT1G07590 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 5.99e-19 | 90.1 |
| MS.gene005504.t1 | AT3G11380 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 9.00e-18 | 86.7 |
| MS.gene005504.t1 | AT3G11380 | 34.483 | 145 | 91 | 4 | 57 | 197 | 372 | 516 | 4.60e-12 | 68.6 |
| MS.gene005504.t1 | AT1G28000 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.23e-15 | 79.0 |
| MS.gene005504.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 7.14e-11 | 65.1 |
| MS.gene005504.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 7.14e-11 | 65.1 |
| MS.gene005504.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 7.14e-11 | 65.1 |
| MS.gene005504.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 7.14e-11 | 65.1 |
| MS.gene005504.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 7.14e-11 | 65.1 |
Find 117 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1.1:-64403475 | MS.gene005504:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1.1:-64405282 | MS.gene005504:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1.1:-64403981 | MS.gene005504:CDS |
| GGCATGTTAATTATGATTCT+AGG | 0.282172 | 1.1:-64403440 | MS.gene005504:CDS |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1.1:-64403140 | MS.gene005504:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1.1:+64403499 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1.1:-64403512 | MS.gene005504:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1.1:+64405130 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1.1:-64403335 | MS.gene005504:CDS |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1.1:-64403328 | MS.gene005504:CDS |
| TAAAGGTTTGCCTTCTTATT+CGG | 0.342655 | 1.1:+64405207 | None:intergenic |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1.1:-64403329 | MS.gene005504:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1.1:-64403316 | MS.gene005504:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1.1:-64403499 | MS.gene005504:CDS |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1.1:-64403615 | MS.gene005504:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1.1:+64403935 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1.1:-64403289 | MS.gene005504:CDS |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1.1:-64403370 | MS.gene005504:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1.1:-64403418 | MS.gene005504:CDS |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1.1:+64403019 | None:intergenic |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1.1:-64403168 | MS.gene005504:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1.1:-64403469 | MS.gene005504:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1.1:-64403461 | MS.gene005504:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1.1:-64403265 | MS.gene005504:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1.1:+64403604 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1.1:-64403886 | MS.gene005504:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1.1:-64403614 | MS.gene005504:CDS |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1.1:+64403538 | None:intergenic |
| AATTATGATTCTAGGTTGGT+TGG | 0.463994 | 1.1:-64403432 | MS.gene005504:CDS |
| TATGTGTACTTATTCTTAGC+AGG | 0.464585 | 1.1:+64404062 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1.1:+64403619 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1.1:-64403581 | MS.gene005504:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1.1:-64403932 | MS.gene005504:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1.1:+64405158 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1.1:+64405184 | None:intergenic |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1.1:+64403207 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1.1:-64403058 | MS.gene005504:CDS |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1.1:-64405272 | MS.gene005504:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1.1:-64405297 | None:intergenic |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1.1:-64403580 | MS.gene005504:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1.1:-64403609 | MS.gene005504:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1.1:-64405123 | MS.gene005504:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1.1:+64404115 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1.1:+64405076 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1.1:+64403554 | None:intergenic |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1.1:-64403813 | MS.gene005504:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1.1:+64403071 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1.1:-64405276 | MS.gene005504:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1.1:+64405263 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1.1:-64403545 | MS.gene005504:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1.1:-64405094 | MS.gene005504:CDS |
| TACTTATTCTTAGCAGGAGG+AGG | 0.504708 | 1.1:+64404068 | None:intergenic |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1.1:-64403714 | MS.gene005504:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1.1:+64405274 | None:intergenic |
| TGGTAAGTTTCGCGTTGGCG+TGG | 0.513906 | 1.1:+64403639 | None:intergenic |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1.1:+64405190 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1.1:-64403790 | MS.gene005504:CDS |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1.1:-64403755 | MS.gene005504:CDS |
| TGTTAATTATGATTCTAGGT+TGG | 0.526575 | 1.1:-64403436 | MS.gene005504:CDS |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1.1:-64403595 | MS.gene005504:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1.1:+64403537 | None:intergenic |
| TGATTCGGATGCAGTAATGC+AGG | 0.533996 | 1.1:+64403086 | None:intergenic |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1.1:+64403324 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1.1:-64403808 | MS.gene005504:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1.1:+64403553 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1.1:-64403285 | MS.gene005504:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1.1:+64403201 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1.1:-64403579 | MS.gene005504:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1.1:-64403348 | MS.gene005504:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1.1:-64404125 | MS.gene005504:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1.1:-64403078 | MS.gene005504:CDS |
| ACGACTATGCACAGCTGCAA+CGG | 0.554797 | 1.1:-64405241 | MS.gene005504:CDS |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1.1:+64403211 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1.1:-64403470 | MS.gene005504:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1.1:+64403060 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1.1:+64403013 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1.1:-64405135 | MS.gene005504:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1.1:-64404199 | MS.gene005504:intron |
| AGCTGAGCTGATGCTTAAGA+AGG | 0.568590 | 1.1:-64403679 | MS.gene005504:CDS |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1.1:+64403253 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1.1:-64403927 | MS.gene005504:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1.1:-64405055 | MS.gene005504:intron |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1.1:-64403379 | MS.gene005504:CDS |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1.1:+64405149 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1.1:-64403901 | MS.gene005504:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1.1:-64403496 | MS.gene005504:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1.1:-64403246 | MS.gene005504:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1.1:+64403900 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1.1:+64403530 | None:intergenic |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.585566 | 1.1:+64403634 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1.1:+64405049 | None:intergenic |
| GCTAAGAATAAGTACACATA+CGG | 0.590387 | 1.1:-64404059 | MS.gene005504:CDS |
| GGCTGAGCTTCCGAATAAGA+AGG | 0.593577 | 1.1:-64405217 | MS.gene005504:CDS |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1.1:-64403881 | MS.gene005504:CDS |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1.1:+64403888 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1.1:-64403495 | MS.gene005504:CDS |
| CTGATGCTTAAGAAGGTGGA+AGG | 0.606074 | 1.1:-64403672 | MS.gene005504:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1.1:-64404033 | MS.gene005504:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1.1:-64405279 | MS.gene005504:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1.1:-64403397 | MS.gene005504:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1.1:+64403014 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1.1:-64403391 | MS.gene005504:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1.1:-64403578 | MS.gene005504:CDS |
| GTGTACTTATTCTTAGCAGG+AGG | 0.627743 | 1.1:+64404065 | None:intergenic |
| TTGCAGCTGTGCATAGTCGT+CGG | 0.628508 | 1.1:+64405244 | None:intergenic |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1.1:-64405134 | MS.gene005504:CDS |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1.1:-64405177 | MS.gene005504:CDS |
| ACTATGCACAGCTGCAACGG+CGG | 0.641633 | 1.1:-64405238 | MS.gene005504:CDS |
| TGAGCTGATGCTTAAGAAGG+TGG | 0.650801 | 1.1:-64403676 | MS.gene005504:CDS |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1.1:-64404187 | MS.gene005504:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1.1:-64404015 | MS.gene005504:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1.1:-64403556 | MS.gene005504:CDS |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1.1:+64403242 | None:intergenic |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1.1:-64405174 | MS.gene005504:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1.1:-64404120 | MS.gene005504:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1.1:+64403796 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1.1:+64403539 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | chr1.1:64404088-64404107 | MS.gene005504:CDS | 15.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | chr1.1:64404836-64404855 | MS.gene005504:intron | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | chr1.1:64403936-64403955 | MS.gene005504:CDS | 20.0% |
| !! | GATAATAATTTGAGAAAGTA+AGG | + | chr1.1:64403430-64403449 | None:intergenic | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | chr1.1:64404835-64404854 | MS.gene005504:intron | 20.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | chr1.1:64403304-64403323 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | chr1.1:64403555-64403574 | MS.gene005504:CDS | 20.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | chr1.1:64403401-64403420 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | chr1.1:64403519-64403538 | MS.gene005504:CDS | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | chr1.1:64404373-64404392 | MS.gene005504:intron | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | chr1.1:64404373-64404392 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | chr1.1:64403305-64403324 | None:intergenic | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | chr1.1:64404830-64404849 | MS.gene005504:intron | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | chr1.1:64403968-64403987 | MS.gene005504:CDS | 25.0% |
| ! | TGTTAATTATGATTCTAGGT+TGG | - | chr1.1:64404869-64404888 | MS.gene005504:intron | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | chr1.1:64403620-64403639 | MS.gene005504:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | chr1.1:64404324-64404343 | MS.gene005504:intron | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | chr1.1:64403942-64403961 | MS.gene005504:CDS | 25.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | chr1.1:64403291-64403310 | None:intergenic | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | chr1.1:64404460-64404479 | MS.gene005504:intron | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | chr1.1:64404137-64404156 | MS.gene005504:CDS | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | chr1.1:64403941-64403960 | MS.gene005504:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | chr1.1:64404136-64404155 | MS.gene005504:CDS | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | chr1.1:64405001-64405020 | MS.gene005504:intron | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | chr1.1:64404314-64404333 | MS.gene005504:intron | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | chr1.1:64403778-64403797 | None:intergenic | 25.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | chr1.1:64404550-64404569 | MS.gene005504:intron | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | chr1.1:64403301-64403320 | None:intergenic | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr1.1:64403745-64403764 | MS.gene005504:CDS | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | chr1.1:64405165-64405184 | MS.gene005504:CDS | 30.0% | |
| GCTAAGAATAAGTACACATA+CGG | - | chr1.1:64404246-64404265 | MS.gene005504:intron | 30.0% | |
| GGCATGTTAATTATGATTCT+AGG | - | chr1.1:64404865-64404884 | MS.gene005504:intron | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | chr1.1:64404725-64404744 | MS.gene005504:intron | 30.0% | |
| TAAAGGTTTGCCTTCTTATT+CGG | + | chr1.1:64403101-64403120 | None:intergenic | 30.0% | |
| TATGTGTACTTATTCTTAGC+AGG | + | chr1.1:64404246-64404265 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | chr1.1:64404419-64404438 | MS.gene005504:intron | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | chr1.1:64403171-64403190 | MS.gene005504:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr1.1:64403746-64403765 | MS.gene005504:CDS | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | chr1.1:64403479-64403498 | None:intergenic | 30.0% | |
| TTAAAGAGGTTTATAGAGTG+TGG | - | chr1.1:64404724-64404743 | MS.gene005504:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | chr1.1:64404793-64404812 | MS.gene005504:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | chr1.1:64405248-64405267 | None:intergenic | 30.0% | |
| TTCATAACATTAACCAACTG+AGG | + | chr1.1:64404420-64404439 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | chr1.1:64403170-64403189 | MS.gene005504:CDS | 30.0% | |
| TTTATTGGAGAAAGGTCAAT+TGG | - | chr1.1:64405016-64405035 | MS.gene005504:intron | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | chr1.1:64404468-64404487 | MS.gene005504:intron | 30.0% |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | chr1.1:64403788-64403807 | MS.gene005504:CDS | 30.0% |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | chr1.1:64404590-64404609 | None:intergenic | 30.0% |
| ! | TGGTATTCATACAGTATTGA+AGG | - | chr1.1:64405247-64405266 | MS.gene005504:CDS | 30.0% |
| !! | AATTATGATTCTAGGTTGGT+TGG | - | chr1.1:64404873-64404892 | MS.gene005504:intron | 30.0% |
| !! | AGTAATGCAGGTTTTAATAG+AGG | + | chr1.1:64405210-64405229 | None:intergenic | 30.0% |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | chr1.1:64405008-64405027 | MS.gene005504:intron | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | chr1.1:64404101-64404120 | MS.gene005504:CDS | 30.0% |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | + | chr1.1:64403506-64403525 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | chr1.1:64403672-64403691 | None:intergenic | 30.0% |
| AAAGAGGTTTATAGAGTGTG+GGG | - | chr1.1:64404726-64404745 | MS.gene005504:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | chr1.1:64404810-64404829 | MS.gene005504:intron | 35.0% | |
| AGCACCTATCGTAAAAAAGA+TGG | - | chr1.1:64403771-64403790 | MS.gene005504:CDS | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | chr1.1:64403492-64403511 | MS.gene005504:CDS | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | chr1.1:64405237-64405256 | None:intergenic | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | chr1.1:64404378-64404397 | MS.gene005504:intron | 35.0% | |
| ATTTCCCGAATCCTAAAGAA+AGG | + | chr1.1:64404984-64405003 | None:intergenic | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | chr1.1:64404778-64404797 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | chr1.1:64404809-64404828 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | chr1.1:64404806-64404825 | MS.gene005504:intron | 35.0% | |
| CTTTCCCTTCGATTATATAC+TGG | + | chr1.1:64403178-64403197 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | chr1.1:64405137-64405156 | MS.gene005504:CDS | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | chr1.1:64404591-64404610 | MS.gene005504:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | chr1.1:64404809-64404828 | MS.gene005504:intron | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | chr1.1:64404272-64404291 | MS.gene005504:intron | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | chr1.1:64404424-64404443 | MS.gene005504:intron | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | chr1.1:64403563-64403582 | MS.gene005504:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | chr1.1:64404018-64404037 | None:intergenic | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | chr1.1:64403833-64403852 | MS.gene005504:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | chr1.1:64404118-64404137 | MS.gene005504:CDS | 35.0% |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | chr1.1:64403791-64403810 | MS.gene005504:CDS | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | chr1.1:64404106-64404125 | MS.gene005504:CDS | 35.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | chr1.1:64404727-64404746 | MS.gene005504:intron | 40.0% | |
| ACAAGATCGGTGATGTTGTA+TGG | - | chr1.1:64403633-64403652 | MS.gene005504:CDS | 40.0% | |
| AGAAATGGTAAGTTTCGCGT+TGG | + | chr1.1:64404674-64404693 | None:intergenic | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | chr1.1:64403182-64403201 | MS.gene005504:CDS | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | chr1.1:64404290-64404309 | MS.gene005504:intron | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | chr1.1:64404689-64404708 | None:intergenic | 40.0% | |
| CCAATTAGTGGGATAAGACT+TGG | - | chr1.1:64404016-64404035 | MS.gene005504:CDS | 40.0% | |
| CTCCGTACTACAAAATCTAC+AGG | + | chr1.1:64403838-64403857 | None:intergenic | 40.0% | |
| CTTATCCCACTAATTGGGAT+CGG | + | chr1.1:64404013-64404032 | None:intergenic | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | chr1.1:64404914-64404933 | MS.gene005504:intron | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | chr1.1:64404180-64404199 | MS.gene005504:CDS | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | chr1.1:64404908-64404927 | MS.gene005504:intron | 40.0% | |
| GTGTACTTATTCTTAGCAGG+AGG | + | chr1.1:64404243-64404262 | None:intergenic | 40.0% | |
| TACTTATTCTTAGCAGGAGG+AGG | + | chr1.1:64404240-64404259 | None:intergenic | 40.0% | |
| TAGATTCCATCATGCATTCG+AGG | - | chr1.1:64403250-64403269 | MS.gene005504:CDS | 40.0% | |
| TAGGATTCGGGAAATGTTCA+TGG | - | chr1.1:64404989-64405008 | MS.gene005504:intron | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | chr1.1:64404515-64404534 | MS.gene005504:intron | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | chr1.1:64403867-64403886 | None:intergenic | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | chr1.1:64404844-64404863 | MS.gene005504:intron | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | chr1.1:64404193-64404212 | None:intergenic | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | chr1.1:64405020-64405039 | MS.gene005504:intron | 40.0% | |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | chr1.1:64403593-64403612 | MS.gene005504:CDS | 40.0% |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | chr1.1:64403797-64403816 | MS.gene005504:CDS | 40.0% |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | chr1.1:64403023-64403042 | MS.gene005504:CDS | 40.0% |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | chr1.1:64404019-64404038 | None:intergenic | 40.0% |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | chr1.1:64403201-64403220 | None:intergenic | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | chr1.1:64403592-64403611 | MS.gene005504:CDS | 40.0% |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | chr1.1:64404710-64404729 | MS.gene005504:intron | 40.0% |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | chr1.1:64405107-64405126 | None:intergenic | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | chr1.1:64404977-64404996 | MS.gene005504:intron | 40.0% |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | chr1.1:64404976-64404995 | MS.gene005504:intron | 40.0% |
| AAACACGTTCAACCTCACCA+AGG | + | chr1.1:64404512-64404531 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | chr1.1:64403602-64403621 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | chr1.1:64404408-64404427 | None:intergenic | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | chr1.1:64404005-64404024 | None:intergenic | 45.0% | |
| AGCTGAGCTGATGCTTAAGA+AGG | - | chr1.1:64404626-64404645 | MS.gene005504:intron | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1.1:64403703-64403722 | MS.gene005504:CDS | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | chr1.1:64404004-64404023 | MS.gene005504:CDS | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | chr1.1:64404704-64404723 | None:intergenic | 45.0% | |
| CTGATGCTTAAGAAGGTGGA+AGG | - | chr1.1:64404633-64404652 | MS.gene005504:intron | 45.0% | |
| TACGATACTTTCGAAGCTCC+TGG | + | chr1.1:64403232-64403251 | None:intergenic | 45.0% | |
| TAGTCAAATCACTCGAGGCA+GGG | - | chr1.1:64403876-64403895 | MS.gene005504:CDS | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | chr1.1:64404691-64404710 | MS.gene005504:intron | 45.0% | |
| TGAGCTGATGCTTAAGAAGG+TGG | - | chr1.1:64404629-64404648 | MS.gene005504:intron | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | chr1.1:64404005-64404024 | MS.gene005504:CDS | 45.0% | |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | chr1.1:64404185-64404204 | MS.gene005504:CDS | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | chr1.1:64405097-64405116 | None:intergenic | 45.0% | |
| TTAGTCAAATCACTCGAGGC+AGG | - | chr1.1:64403875-64403894 | MS.gene005504:CDS | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | chr1.1:64404690-64404709 | MS.gene005504:intron | 45.0% | |
| ! | GAGGTTAGTCAAATCACTCG+AGG | - | chr1.1:64403871-64403890 | MS.gene005504:CDS | 45.0% |
| ! | TGATTCGGATGCAGTAATGC+AGG | + | chr1.1:64405222-64405241 | None:intergenic | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | chr1.1:64404497-64404516 | MS.gene005504:intron | 45.0% |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | chr1.1:64404492-64404511 | MS.gene005504:intron | 45.0% |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | chr1.1:64403124-64403143 | None:intergenic | 45.0% |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | chr1.1:64404404-64404423 | MS.gene005504:intron | 50.0% | |
| ACGACTATGCACAGCTGCAA+CGG | - | chr1.1:64403064-64403083 | MS.gene005504:CDS | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | chr1.1:64405227-64405246 | MS.gene005504:CDS | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | chr1.1:64403849-64403868 | MS.gene005504:CDS | 50.0% | |
| AGTCAAATCACTCGAGGCAG+GGG | - | chr1.1:64403877-64403896 | MS.gene005504:CDS | 50.0% | |
| CATGGACAAGGAAGCTGTGT+CGG | - | chr1.1:64404926-64404945 | MS.gene005504:intron | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | chr1.1:64403698-64403717 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | chr1.1:64403128-64403147 | MS.gene005504:CDS | 50.0% | |
| GCACTTACAGCTTGTGGTGA+AGG | + | chr1.1:64405101-64405120 | None:intergenic | 50.0% | |
| GCGATACCTCGAATGCATGA+TGG | + | chr1.1:64403259-64403278 | None:intergenic | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | chr1.1:64404970-64404989 | MS.gene005504:intron | 50.0% | |
| GGCTGAGCTTCCGAATAAGA+AGG | - | chr1.1:64403088-64403107 | MS.gene005504:CDS | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | chr1.1:64403388-64403407 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | chr1.1:64403034-64403053 | None:intergenic | 50.0% | |
| TTGCAGCTGTGCATAGTCGT+CGG | + | chr1.1:64403064-64403083 | None:intergenic | 50.0% | |
| ! | AAATAAGCGTTGCCGAGACG+AGG | - | chr1.1:64403683-64403702 | MS.gene005504:CDS | 50.0% |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | chr1.1:64404771-64404790 | None:intergenic | 50.0% |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | chr1.1:64403135-64403154 | None:intergenic | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1.1:64405066-64405085 | None:intergenic | 50.0% |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | chr1.1:64405040-64405059 | MS.gene005504:intron | 50.0% |
| ACGGAGAGTAGACCAGATGG+AGG | - | chr1.1:64403852-64403871 | MS.gene005504:CDS | 55.0% | |
| ACTATGCACAGCTGCAACGG+CGG | - | chr1.1:64403067-64403086 | MS.gene005504:CDS | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | chr1.1:64404760-64404779 | MS.gene005504:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | chr1.1:64404754-64404773 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | chr1.1:64403695-64403714 | MS.gene005504:CDS | 55.0% | |
| CTGAGCCTTTATGCTGGGAC+TGG | - | chr1.1:64404696-64404715 | MS.gene005504:intron | 55.0% | |
| CTGGTTCAACGTCTGCGACA+CGG | + | chr1.1:64403159-64403178 | None:intergenic | 55.0% | |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | chr1.1:64404957-64404976 | MS.gene005504:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | chr1.1:64404749-64404768 | MS.gene005504:intron | 55.0% | |
| GAGGCCGCACTTTCAGAAGT+CGG | - | chr1.1:64405059-64405078 | MS.gene005504:CDS | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | chr1.1:64403366-64403385 | MS.gene005504:CDS | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | chr1.1:64404755-64404774 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | chr1.1:64403211-64403230 | MS.gene005504:CDS | 55.0% | |
| TGTCAGACACCGGCAAGTGT+TGG | + | chr1.1:64403378-64403397 | None:intergenic | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | chr1.1:64404769-64404788 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | chr1.1:64403139-64403158 | None:intergenic | 55.0% |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | chr1.1:64405055-64405074 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | chr1.1:64404770-64404789 | None:intergenic | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | chr1.1:64404935-64404954 | MS.gene005504:intron | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | chr1.1:64403033-64403052 | MS.gene005504:CDS | 55.0% |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | chr1.1:64403026-64403045 | MS.gene005504:CDS | 55.0% |
| ! | TGGTAAGTTTCGCGTTGGCG+TGG | + | chr1.1:64404669-64404688 | None:intergenic | 55.0% |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | chr1.1:64403372-64403391 | None:intergenic | 55.0% |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | chr1.1:64403118-64403137 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | chr1.1:64404887-64404906 | MS.gene005504:intron | 55.0% |
| GCCGACCTAGAAAAGACCGG+AGG | - | chr1.1:64403131-64403150 | MS.gene005504:CDS | 60.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | chr1.1:64403150-64403169 | None:intergenic | 65.0% | |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | chr1.1:64403045-64403064 | None:intergenic | 65.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | chr1.1:64403029-64403048 | MS.gene005504:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 64403020 | 64405307 | 64403020 | ID=MS.gene005504 |
| chr1.1 | mRNA | 64403020 | 64405307 | 64403020 | ID=MS.gene005504.t1;Parent=MS.gene005504 |
| chr1.1 | exon | 64405056 | 64405307 | 64405056 | ID=MS.gene005504.t1.exon1;Parent=MS.gene005504.t1 |
| chr1.1 | CDS | 64405056 | 64405307 | 64405056 | ID=cds.MS.gene005504.t1;Parent=MS.gene005504.t1 |
| chr1.1 | exon | 64403020 | 64404210 | 64403020 | ID=MS.gene005504.t1.exon2;Parent=MS.gene005504.t1 |
| chr1.1 | CDS | 64403020 | 64404210 | 64403020 | ID=cds.MS.gene005504.t1;Parent=MS.gene005504.t1 |
| Gene Sequence |
| Protein sequence |
