Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008872.t1 | XP_013446149.1 | 73.5 | 490 | 85 | 3 | 1 | 445 | 1 | 490 | 6.90E-175 | 623.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008872.t1 | O22714 | 44.4 | 505 | 201 | 5 | 4 | 445 | 3 | 490 | 1.8e-107 | 391.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008872.t1 | A0A072TSI9 | 73.5 | 490 | 85 | 3 | 1 | 445 | 1 | 490 | 5.0e-175 | 623.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21232 | MS.gene008872 | PPI |
| MS.gene20867 | MS.gene008872 | PPI |
| MS.gene07314 | MS.gene008872 | PPI |
| MS.gene008872 | MS.gene38571 | PPI |
| MS.gene008872 | MS.gene07338 | PPI |
| MS.gene008872 | MS.gene07318 | PPI |
| MS.gene008872 | MS.gene07313 | PPI |
| MS.gene21180 | MS.gene008872 | PPI |
| MS.gene20884 | MS.gene008872 | PPI |
| MS.gene013110 | MS.gene008872 | PPI |
| MS.gene008872 | MS.gene005505 | PPI |
| MS.gene005487 | MS.gene008872 | PPI |
| MS.gene008872 | MS.gene20868 | PPI |
| MS.gene008872 | MS.gene020461 | PPI |
| MS.gene008872 | MS.gene005504 | PPI |
| MS.gene07317 | MS.gene008872 | PPI |
| MS.gene008872 | MS.gene21177 | PPI |
| MS.gene008872 | MS.gene21234 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008872.t1 | MTR_8g069570 | 84.490 | 490 | 31 | 3 | 1 | 445 | 1 | 490 | 0.0 | 823 |
| MS.gene008872.t1 | MTR_1g086820 | 32.366 | 448 | 244 | 10 | 31 | 433 | 42 | 475 | 3.84e-56 | 193 |
| MS.gene008872.t1 | MTR_2g013450 | 28.477 | 453 | 273 | 7 | 24 | 429 | 29 | 477 | 2.48e-53 | 186 |
| MS.gene008872.t1 | MTR_1g072300 | 27.500 | 440 | 262 | 9 | 55 | 444 | 69 | 501 | 3.38e-53 | 186 |
| MS.gene008872.t1 | MTR_8g007375 | 27.078 | 373 | 224 | 5 | 89 | 416 | 11 | 380 | 1.15e-42 | 155 |
| MS.gene008872.t1 | MTR_2g047855 | 28.675 | 415 | 241 | 13 | 23 | 388 | 31 | 439 | 6.05e-40 | 150 |
| MS.gene008872.t1 | MTR_8g059115 | 24.297 | 391 | 246 | 7 | 89 | 433 | 10 | 396 | 7.04e-40 | 148 |
| MS.gene008872.t1 | MTR_8g465890 | 27.126 | 435 | 260 | 10 | 6 | 388 | 8 | 437 | 2.09e-38 | 145 |
| MS.gene008872.t1 | MTR_3g099753 | 22.494 | 449 | 297 | 7 | 43 | 443 | 57 | 502 | 3.32e-36 | 139 |
| MS.gene008872.t1 | MTR_3g099753 | 22.494 | 449 | 297 | 7 | 43 | 443 | 81 | 526 | 5.02e-36 | 139 |
| MS.gene008872.t1 | MTR_7g089770 | 25.107 | 466 | 300 | 10 | 15 | 439 | 150 | 607 | 3.18e-33 | 132 |
| MS.gene008872.t1 | MTR_1g050750 | 25.513 | 439 | 280 | 8 | 35 | 432 | 102 | 534 | 4.11e-33 | 131 |
| MS.gene008872.t1 | MTR_2g090290 | 26.667 | 420 | 249 | 11 | 28 | 393 | 37 | 451 | 7.86e-32 | 127 |
| MS.gene008872.t1 | MTR_1g022400 | 25.836 | 329 | 196 | 6 | 43 | 323 | 74 | 402 | 6.19e-26 | 109 |
| MS.gene008872.t1 | MTR_2g096880 | 22.266 | 503 | 322 | 12 | 7 | 445 | 12 | 509 | 5.36e-24 | 104 |
| MS.gene008872.t1 | MTR_3g105900 | 25.382 | 327 | 193 | 9 | 147 | 425 | 254 | 577 | 1.88e-14 | 76.3 |
| MS.gene008872.t1 | MTR_2g102210 | 22.078 | 308 | 204 | 4 | 142 | 420 | 197 | 497 | 2.21e-13 | 72.8 |
| MS.gene008872.t1 | MTR_7g017570 | 26.697 | 221 | 129 | 4 | 141 | 349 | 320 | 519 | 3.15e-13 | 72.4 |
| MS.gene008872.t1 | MTR_0014s0250 | 21.739 | 276 | 194 | 3 | 149 | 409 | 254 | 522 | 5.10e-13 | 71.2 |
| MS.gene008872.t1 | MTR_3g115270 | 22.300 | 287 | 201 | 3 | 149 | 420 | 302 | 581 | 3.28e-12 | 68.9 |
| MS.gene008872.t1 | MTR_1g033960 | 24.085 | 328 | 200 | 10 | 136 | 426 | 150 | 465 | 8.64e-12 | 67.8 |
| MS.gene008872.t1 | MTR_5g090210 | 19.802 | 303 | 213 | 4 | 151 | 434 | 401 | 692 | 3.74e-11 | 65.9 |
| MS.gene008872.t1 | MTR_8g031520 | 27.041 | 196 | 111 | 4 | 24 | 187 | 105 | 300 | 5.21e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008872.t1 | AT1G60770 | 57.172 | 488 | 163 | 4 | 4 | 445 | 3 | 490 | 0.0 | 573 |
| MS.gene008872.t1 | AT1G02370 | 34.934 | 458 | 244 | 6 | 33 | 442 | 84 | 535 | 1.84e-81 | 261 |
| MS.gene008872.t1 | AT4G01990 | 32.917 | 480 | 266 | 8 | 12 | 443 | 30 | 501 | 2.36e-71 | 234 |
| MS.gene008872.t1 | AT1G02150 | 30.839 | 441 | 254 | 7 | 2 | 394 | 46 | 483 | 1.80e-56 | 195 |
| MS.gene008872.t1 | AT4G02820 | 29.252 | 441 | 259 | 8 | 50 | 444 | 88 | 521 | 5.40e-56 | 194 |
| MS.gene008872.t1 | AT4G21705 | 27.292 | 469 | 288 | 8 | 24 | 443 | 26 | 490 | 5.66e-53 | 185 |
| MS.gene008872.t1 | AT5G27460 | 24.945 | 453 | 285 | 7 | 28 | 429 | 43 | 491 | 2.04e-40 | 151 |
| MS.gene008872.t1 | AT2G20710 | 24.773 | 440 | 274 | 11 | 23 | 414 | 38 | 468 | 1.23e-33 | 132 |
| MS.gene008872.t1 | AT1G80270 | 25.056 | 443 | 274 | 10 | 37 | 432 | 142 | 573 | 4.88e-33 | 132 |
| MS.gene008872.t1 | AT1G80270 | 25.056 | 443 | 274 | 10 | 37 | 432 | 142 | 573 | 4.88e-33 | 132 |
| MS.gene008872.t1 | AT1G80270 | 25.056 | 443 | 274 | 10 | 37 | 432 | 142 | 573 | 4.88e-33 | 132 |
| MS.gene008872.t1 | AT1G80270 | 25.056 | 443 | 274 | 10 | 37 | 432 | 142 | 573 | 4.88e-33 | 132 |
| MS.gene008872.t1 | AT1G80270 | 25.056 | 443 | 274 | 10 | 37 | 432 | 142 | 573 | 4.88e-33 | 132 |
| MS.gene008872.t1 | AT2G20710 | 26.724 | 348 | 203 | 9 | 91 | 391 | 12 | 354 | 1.31e-30 | 122 |
| MS.gene008872.t1 | AT1G15480 | 24.661 | 442 | 281 | 9 | 35 | 432 | 138 | 571 | 7.61e-29 | 119 |
| MS.gene008872.t1 | AT3G15590 | 24.945 | 453 | 284 | 9 | 31 | 433 | 141 | 587 | 4.62e-22 | 99.4 |
| MS.gene008872.t1 | AT3G15590 | 24.945 | 453 | 284 | 9 | 31 | 433 | 141 | 587 | 4.62e-22 | 99.4 |
| MS.gene008872.t1 | AT1G28020 | 25.404 | 433 | 261 | 11 | 43 | 416 | 56 | 485 | 9.71e-21 | 95.1 |
| MS.gene008872.t1 | AT5G09450 | 26.984 | 252 | 151 | 7 | 43 | 261 | 75 | 326 | 2.00e-20 | 93.2 |
| MS.gene008872.t1 | AT1G07590 | 22.511 | 462 | 295 | 9 | 37 | 444 | 79 | 531 | 1.40e-17 | 85.5 |
Find 87 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATATGATTCAGGTTT+TGG | 0.218361 | 8.1:+35587671 | MS.gene008872:CDS |
| GCAAAGTATACGAGGTTTAT+AGG | 0.245815 | 8.1:+35587598 | MS.gene008872:CDS |
| ATTACATTGTATGGGAAAAT+AGG | 0.247775 | 8.1:+35587576 | MS.gene008872:CDS |
| GCTGCAGTTAATGATATTTC+CGG | 0.253859 | 8.1:+35587375 | MS.gene008872:CDS |
| CAGTTTCTAATTACATTGTA+TGG | 0.283082 | 8.1:+35587567 | MS.gene008872:CDS |
| GTGGGAAGCGCGTTTATAAA+TGG | 0.289722 | 8.1:+35584399 | MS.gene008872:CDS |
| AAGCTATCTGAATATGATTC+AGG | 0.291296 | 8.1:+35587665 | MS.gene008872:CDS |
| CCAAGCTATACATATTGATT+TGG | 0.336982 | 8.1:+35587044 | MS.gene008872:CDS |
| CTTAATCAGTTTATTAAGAG+TGG | 0.365489 | 8.1:+35584380 | MS.gene008872:CDS |
| AGGAGCGTGCTCGGAGGAGG+GGG | 0.367351 | 8.1:+35587835 | MS.gene008872:CDS |
| ATTATATCAACCTGCTCTTA+AGG | 0.369801 | 8.1:+35584460 | MS.gene008872:CDS |
| ATATAGCCTCAAGCAACTTC+AGG | 0.377618 | 8.1:-35588205 | None:intergenic |
| TAAAATCTGCATTTCGCAAA+TGG | 0.388939 | 8.1:-35587899 | None:intergenic |
| TATTCGAGTTGCAAATGTTT+TGG | 0.390052 | 8.1:+35587764 | MS.gene008872:CDS |
| GTTGGCAATGGATTGTTTAT+CGG | 0.390754 | 8.1:+35587923 | MS.gene008872:CDS |
| CATACAATGTAATTAGAAAC+TGG | 0.399606 | 8.1:-35587566 | None:intergenic |
| AGTCTTTATCATATTCCTCT+TGG | 0.414359 | 8.1:-35587013 | None:intergenic |
| AGAAGGTGCACTTAAGGAAT+TGG | 0.419645 | 8.1:+35587509 | MS.gene008872:CDS |
| AAGAAATCTGTGGAATCTGC+AGG | 0.431533 | 8.1:+35588074 | MS.gene008872:CDS |
| CAAAGTATACGAGGTTTATA+GGG | 0.436615 | 8.1:+35587599 | MS.gene008872:CDS |
| CGCGTTTATAAATGGGAAGT+TGG | 0.445756 | 8.1:+35584407 | MS.gene008872:CDS |
| TAAAGGAGCGTGCTCGGAGG+AGG | 0.446366 | 8.1:+35587832 | MS.gene008872:CDS |
| ATAGGGTCTGGCGTTCTCCT+AGG | 0.446594 | 8.1:+35587616 | MS.gene008872:CDS |
| ATTCTTACACGTATAATGTA+TGG | 0.452805 | 8.1:+35587340 | MS.gene008872:CDS |
| ACATTATACGTGTAAGAATC+CGG | 0.466552 | 8.1:-35587336 | None:intergenic |
| AGCTTTCATTTCTTGCATGA+TGG | 0.470995 | 8.1:-35587301 | None:intergenic |
| AAGAGGGACGGACGAATCAC+TGG | 0.473387 | 8.1:+35587423 | MS.gene008872:CDS |
| AAAGGAGCGTGCTCGGAGGA+GGG | 0.478966 | 8.1:+35587833 | MS.gene008872:CDS |
| TATACGAGGTTTATAGGGTC+TGG | 0.480388 | 8.1:+35587604 | MS.gene008872:CDS |
| TGATATTTCCGGTGTTGAAA+GGG | 0.481939 | 8.1:+35587386 | MS.gene008872:CDS |
| GAAGGCAGAAGGTGCACTTA+AGG | 0.485117 | 8.1:+35587503 | MS.gene008872:CDS |
| GTACCTATTGTCTCAGATGA+TGG | 0.485727 | 8.1:-35587987 | None:intergenic |
| TGGGAAGCGCGTTTATAAAT+GGG | 0.485728 | 8.1:+35584400 | MS.gene008872:CDS |
| TGTGGAATCTGCAGGGGAAG+AGG | 0.492605 | 8.1:+35588082 | MS.gene008872:CDS |
| GTTCCATCATCTGAGACAAT+AGG | 0.495080 | 8.1:+35587984 | MS.gene008872:CDS |
| ATGATATTTCCGGTGTTGAA+AGG | 0.495451 | 8.1:+35587385 | MS.gene008872:CDS |
| TTATCGGAAGCAATGTCAAT+TGG | 0.499437 | 8.1:+35587939 | MS.gene008872:CDS |
| AGTTTCTAATTACATTGTAT+GGG | 0.504578 | 8.1:+35587568 | MS.gene008872:CDS |
| CCAAATCAATATGTATAGCT+TGG | 0.505400 | 8.1:-35587044 | None:intergenic |
| ATTAGAACTTATGCGGCTGC+TGG | 0.506012 | 8.1:+35588119 | MS.gene008872:CDS |
| GAGCAAGAGAAGGATGTTGA+TGG | 0.508667 | 8.1:+35588026 | MS.gene008872:CDS |
| AAGGAGCGTGCTCGGAGGAG+GGG | 0.512913 | 8.1:+35587834 | MS.gene008872:CDS |
| GTAGAGGGAACGGTGAAAAG+TGG | 0.515345 | 8.1:+35587961 | MS.gene008872:CDS |
| ACGGACGAATCACTGGAGAT+TGG | 0.517783 | 8.1:+35587430 | MS.gene008872:CDS |
| TATAGCCTCAAGCAACTTCA+GGG | 0.518335 | 8.1:-35588204 | None:intergenic |
| TTCATTTCTTGCATGATGGA+CGG | 0.522700 | 8.1:-35587297 | None:intergenic |
| CGCTTAAGAAGCTGAGACAA+CGG | 0.525030 | 8.1:+35584435 | MS.gene008872:CDS |
| ATGTCTCTGATGCAACGTTA+CGG | 0.528194 | 8.1:+35584254 | MS.gene008872:CDS |
| ATATGCAGAATTAGATATGC+TGG | 0.533822 | 8.1:+35587794 | MS.gene008872:CDS |
| GGAGAAGGCTGAAGAACTAA+AGG | 0.536610 | 8.1:+35587815 | MS.gene008872:CDS |
| AAGAACTAAAGGAGCGTGCT+CGG | 0.537452 | 8.1:+35587826 | MS.gene008872:CDS |
| GGGTTATTGATGAGATGAAG+AGG | 0.539631 | 8.1:+35587406 | MS.gene008872:CDS |
| ATCAATAACCCTTTCAACAC+CGG | 0.544306 | 8.1:-35587394 | None:intergenic |
| TTAATCAGTTTATTAAGAGT+GGG | 0.552756 | 8.1:+35584381 | MS.gene008872:CDS |
| CACTTAAGGAATTGGAAAAG+AGG | 0.555566 | 8.1:+35587517 | MS.gene008872:CDS |
| GAAGCAATGTCAATTGGTAG+AGG | 0.559094 | 8.1:+35587945 | MS.gene008872:CDS |
| GGTTATTGATGAGATGAAGA+GGG | 0.563994 | 8.1:+35587407 | MS.gene008872:CDS |
| ATCATTGATTAGAACTTATG+CGG | 0.564943 | 8.1:+35588112 | MS.gene008872:CDS |
| AAGGAATTGGAAAAGAGGAA+TGG | 0.570113 | 8.1:+35587522 | MS.gene008872:CDS |
| GGTCTGGCGTTCTCCTAGGT+TGG | 0.570656 | 8.1:+35587620 | MS.gene008872:CDS |
| GGAGCGTGCTCGGAGGAGGG+GGG | 0.575173 | 8.1:+35587836 | MS.gene008872:CDS |
| AGAATTAGATATGCTGGAGA+AGG | 0.575282 | 8.1:+35587800 | MS.gene008872:CDS |
| GAACTTATGCGGCTGCTGGT+AGG | 0.578729 | 8.1:+35588123 | MS.gene008872:CDS |
| TACTTGAAACTCTTCAAAGA+CGG | 0.580431 | 8.1:+35584329 | MS.gene008872:CDS |
| AACTTGTTTGAGAAGGCAGA+AGG | 0.582161 | 8.1:+35587492 | MS.gene008872:CDS |
| CGAAATCTTGAAGAAATCTG+TGG | 0.586042 | 8.1:+35588064 | MS.gene008872:CDS |
| TATGCAACGACGATTGAAGA+TGG | 0.587542 | 8.1:+35588157 | MS.gene008872:CDS |
| ATGTCAATTGGTAGAGGGAA+CGG | 0.588480 | 8.1:+35587951 | MS.gene008872:CDS |
| GAAAGCTAGCAATATCATGC+CGG | 0.596625 | 8.1:+35587317 | MS.gene008872:CDS |
| AATTTACATGAATCACTCCT+CGG | 0.599378 | 8.1:-35588228 | None:intergenic |
| CATCAACATAAATAGATGCA+AGG | 0.609623 | 8.1:-35587467 | None:intergenic |
| AGAAATCTGTGGAATCTGCA+GGG | 0.614011 | 8.1:+35588075 | MS.gene008872:CDS |
| TAGAGGGAACGGTGAAAAGT+GGG | 0.618228 | 8.1:+35587962 | MS.gene008872:CDS |
| TTGAAACTCTTCAAAGACGG+TGG | 0.620058 | 8.1:+35584332 | MS.gene008872:CDS |
| AGATTCCCTGAAGTTGCTTG+AGG | 0.620494 | 8.1:+35588199 | MS.gene008872:CDS |
| AAGCAATGTCAATTGGTAGA+GGG | 0.624857 | 8.1:+35587946 | MS.gene008872:CDS |
| GATTTGGATGCAAAAGCTAG+AGG | 0.625939 | 8.1:+35587060 | MS.gene008872:CDS |
| GAAGCACTACGAGCAAGAGA+AGG | 0.634627 | 8.1:+35588016 | MS.gene008872:CDS |
| TGATGCTAACTTGTTTGAGA+AGG | 0.634964 | 8.1:+35587485 | MS.gene008872:CDS |
| TTATAAGACAGTGAACTCAA+AGG | 0.644951 | 8.1:-35587230 | None:intergenic |
| ATTGATGAGATGAAGAGGGA+CGG | 0.662413 | 8.1:+35587411 | MS.gene008872:CDS |
| GAAATCTGTGGAATCTGCAG+GGG | 0.667214 | 8.1:+35588076 | MS.gene008872:CDS |
| TATCAGAAACAACGGCCAAG+AGG | 0.668391 | 8.1:+35586998 | MS.gene008872:CDS |
| GTTGCTTGAGGCTATATCCG+AGG | 0.680098 | 8.1:+35588211 | MS.gene008872:CDS |
| GTTGCAGTTATCAGAAACAA+CGG | 0.684228 | 8.1:+35586990 | MS.gene008872:intron |
| AACTAAAGGAGCGTGCTCGG+AGG | 0.698646 | 8.1:+35587829 | MS.gene008872:CDS |
| GAAAATAGGCAAAGTATACG+AGG | 0.724011 | 8.1:+35587590 | MS.gene008872:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTATTATTTAAATTGAA+AGG | - | chr8.1:35586838-35586857 | None:intergenic | 10.0% |
| !! | TGAAAAATAAGATTATATAT+TGG | + | chr8.1:35584547-35584566 | MS.gene008872:intron | 10.0% |
| !! | AATATAATGATATATTAGCT+TGG | + | chr8.1:35585454-35585473 | MS.gene008872:intron | 15.0% |
| !! | CATATAAACTTATCATATAA+GGG | + | chr8.1:35585068-35585087 | MS.gene008872:intron | 15.0% |
| !!! | AAAAACTAACTTTATTTAAC+CGG | - | chr8.1:35585984-35586003 | None:intergenic | 15.0% |
| !!! | AATTGTTTTTACAAAACTTA+TGG | + | chr8.1:35584776-35584795 | MS.gene008872:intron | 15.0% |
| !!! | ATATAATGATATATTAGCTT+GGG | + | chr8.1:35585455-35585474 | MS.gene008872:intron | 15.0% |
| !!! | ATTTTCAACTTATTTTCATA+AGG | - | chr8.1:35585184-35585203 | None:intergenic | 15.0% |
| !!! | TAAATAAAGTTAGTTTTTTC+TGG | + | chr8.1:35585986-35586005 | MS.gene008872:intron | 15.0% |
| !! | AAATGCTTATGATAAGAATT+TGG | + | chr8.1:35584959-35584978 | MS.gene008872:intron | 20.0% |
| !! | AGTTTCTAATTACATTGTAT+GGG | + | chr8.1:35587568-35587587 | MS.gene008872:CDS | 20.0% |
| !! | CATATGTATAATATTACGTA+AGG | + | chr8.1:35584722-35584741 | MS.gene008872:intron | 20.0% |
| !! | GAATGAAGTTATTTATATCA+TGG | + | chr8.1:35585482-35585501 | MS.gene008872:intron | 20.0% |
| !! | GCATATAAACTTATCATATA+AGG | + | chr8.1:35585067-35585086 | MS.gene008872:intron | 20.0% |
| !! | GCCAAAAAAAAAAAATTAAC+TGG | - | chr8.1:35585590-35585609 | None:intergenic | 20.0% |
| !! | TACTTCAAAAACTCATTATA+TGG | - | chr8.1:35586623-35586642 | None:intergenic | 20.0% |
| !! | TTAATCAGTTTATTAAGAGT+GGG | + | chr8.1:35584381-35584400 | MS.gene008872:CDS | 20.0% |
| !! | TTCTTTATGAATTATGAATG+TGG | + | chr8.1:35586698-35586717 | MS.gene008872:intron | 20.0% |
| !! | TTGTCCATGAATATAAATTA+TGG | - | chr8.1:35586955-35586974 | None:intergenic | 20.0% |
| !!! | AAAAACTTGGGAAATATTTT+TGG | + | chr8.1:35587872-35587891 | MS.gene008872:CDS | 20.0% |
| !!! | AAAGTCAATTGTTTTAATGT+AGG | + | chr8.1:35585127-35585146 | MS.gene008872:intron | 20.0% |
| !!! | AATAAGATTATATATTGGCT+TGG | + | chr8.1:35584552-35584571 | MS.gene008872:intron | 20.0% |
| !!! | CATCAATTAATTTTTTGACA+TGG | - | chr8.1:35586546-35586565 | None:intergenic | 20.0% |
| !!! | GCCAGTTAATTTTTTTTTTT+TGG | + | chr8.1:35585586-35585605 | MS.gene008872:intron | 20.0% |
| !!! | TAATTTTTTTTTTTTGGCTG+TGG | + | chr8.1:35585592-35585611 | MS.gene008872:intron | 20.0% |
| ! | AAGTTAATGAAGAATGTCAT+AGG | + | chr8.1:35584814-35584833 | MS.gene008872:intron | 25.0% |
| ! | AATTTAATAAAACGACTCAC+AGG | - | chr8.1:35586520-35586539 | None:intergenic | 25.0% |
| ! | ATTACATTGTATGGGAAAAT+AGG | + | chr8.1:35587576-35587595 | MS.gene008872:CDS | 25.0% |
| ! | ATTCTTACACGTATAATGTA+TGG | + | chr8.1:35587340-35587359 | MS.gene008872:CDS | 25.0% |
| ! | CAGTTTCTAATTACATTGTA+TGG | + | chr8.1:35587567-35587586 | MS.gene008872:CDS | 25.0% |
| ! | CATACAATGTAATTAGAAAC+TGG | - | chr8.1:35587569-35587588 | None:intergenic | 25.0% |
| ! | CCTAGAAAATACTAGTAATT+TGG | - | chr8.1:35585400-35585419 | None:intergenic | 25.0% |
| ! | CGTTCCATAATTTATATTCA+TGG | + | chr8.1:35586948-35586967 | MS.gene008872:intron | 25.0% |
| ! | CTTAATCAGTTTATTAAGAG+TGG | + | chr8.1:35584380-35584399 | MS.gene008872:CDS | 25.0% |
| ! | GCTATATCTATATGTTTCTT+AGG | + | chr8.1:35585007-35585026 | MS.gene008872:intron | 25.0% |
| ! | TATCATGGAATCATAAAATG+AGG | + | chr8.1:35585497-35585516 | MS.gene008872:intron | 25.0% |
| !! | ATCATTGATTAGAACTTATG+CGG | + | chr8.1:35588112-35588131 | MS.gene008872:CDS | 25.0% |
| !! | CCAAATTACTAGTATTTTCT+AGG | + | chr8.1:35585397-35585416 | MS.gene008872:intron | 25.0% |
| !! | GAAGAGAAAATAATTAGCTT+TGG | + | chr8.1:35586259-35586278 | MS.gene008872:intron | 25.0% |
| !! | TATTAGTTTCAACCTTTGTT+AGG | + | chr8.1:35585528-35585547 | MS.gene008872:intron | 25.0% |
| !!! | AGTCTTGGTTATTTTTCTTT+GGG | + | chr8.1:35586461-35586480 | MS.gene008872:intron | 25.0% |
| !!! | GTTAGTGTTGTTATTGATTT+AGG | + | chr8.1:35584637-35584656 | MS.gene008872:intron | 25.0% |
| !!! | TTATTGATTTAGGTTCTGTT+TGG | + | chr8.1:35584647-35584666 | MS.gene008872:intron | 25.0% |
| !!! | TTGTTACTACTTGTTTTTTC+TGG | + | chr8.1:35584594-35584613 | MS.gene008872:intron | 25.0% |
| AAGCTATCTGAATATGATTC+AGG | + | chr8.1:35587665-35587684 | MS.gene008872:CDS | 30.0% | |
| ACATTATACGTGTAAGAATC+CGG | - | chr8.1:35587339-35587358 | None:intergenic | 30.0% | |
| AGCCTTTGGTTATTAATATC+AGG | + | chr8.1:35585618-35585637 | MS.gene008872:intron | 30.0% | |
| AGTCTTTATCATATTCCTCT+TGG | - | chr8.1:35587016-35587035 | None:intergenic | 30.0% | |
| ATATGCAGAATTAGATATGC+TGG | + | chr8.1:35587794-35587813 | MS.gene008872:CDS | 30.0% | |
| ATTATATCAACCTGCTCTTA+AGG | + | chr8.1:35584460-35584479 | MS.gene008872:CDS | 30.0% | |
| ATTTAGAGATTATACGTAGC+AGG | + | chr8.1:35586920-35586939 | MS.gene008872:intron | 30.0% | |
| CAAAGTATACGAGGTTTATA+GGG | + | chr8.1:35587599-35587618 | MS.gene008872:CDS | 30.0% | |
| CACCTGATATTAATAACCAA+AGG | - | chr8.1:35585623-35585642 | None:intergenic | 30.0% | |
| CATAAACTACAACTCACTAA+GGG | - | chr8.1:35584918-35584937 | None:intergenic | 30.0% | |
| CATCAACATAAATAGATGCA+AGG | - | chr8.1:35587470-35587489 | None:intergenic | 30.0% | |
| CCAAATCAATATGTATAGCT+TGG | - | chr8.1:35587047-35587066 | None:intergenic | 30.0% | |
| CTTTGGTTATTAATATCAGG+TGG | + | chr8.1:35585621-35585640 | MS.gene008872:intron | 30.0% | |
| GAGTTTATAGAAATCGCTTA+TGG | - | chr8.1:35585221-35585240 | None:intergenic | 30.0% | |
| TAAAATCTGCATTTCGCAAA+TGG | - | chr8.1:35587902-35587921 | None:intergenic | 30.0% | |
| TACTTGAAACTCTTCAAAGA+CGG | + | chr8.1:35584329-35584348 | MS.gene008872:CDS | 30.0% | |
| TCAAATGCAGTGGTTTATAA+AGG | + | chr8.1:35586726-35586745 | MS.gene008872:intron | 30.0% | |
| TCATAAACTACAACTCACTA+AGG | - | chr8.1:35584919-35584938 | None:intergenic | 30.0% | |
| TTATAAGACAGTGAACTCAA+AGG | - | chr8.1:35587233-35587252 | None:intergenic | 30.0% | |
| TTGTGACTCTATACTAAAGT+AGG | + | chr8.1:35587258-35587277 | MS.gene008872:intron | 30.0% | |
| ! | ATGATATATTAGCTTGGGTT+TGG | + | chr8.1:35585460-35585479 | MS.gene008872:intron | 30.0% |
| ! | ATTTCCCAAGTTTTTGCATT+AGG | - | chr8.1:35587867-35587886 | None:intergenic | 30.0% |
| ! | CCAAGCTATACATATTGATT+TGG | + | chr8.1:35587044-35587063 | MS.gene008872:CDS | 30.0% |
| ! | TAGCTTATGTTTGCAGTTTT+AGG | - | chr8.1:35587651-35587670 | None:intergenic | 30.0% |
| ! | TCTTTTGCAATTGGTATAGT+GGG | + | chr8.1:35585658-35585677 | MS.gene008872:intron | 30.0% |
| ! | TGTTGATGTTGTTGACTATA+TGG | + | chr8.1:35586866-35586885 | MS.gene008872:intron | 30.0% |
| !! | GGTGTCATTGAAAAAAATGA+AGG | + | chr8.1:35587196-35587215 | MS.gene008872:CDS | 30.0% |
| !! | GTTTTGTTGTCTTTTGCAAT+TGG | + | chr8.1:35585649-35585668 | MS.gene008872:intron | 30.0% |
| !! | TATATCTACTCTAGAGTTAC+TGG | - | chr8.1:35586114-35586133 | None:intergenic | 30.0% |
| !! | TCTGAATATGATTCAGGTTT+TGG | + | chr8.1:35587671-35587690 | MS.gene008872:CDS | 30.0% |
| !!! | GAGTCTTGGTTATTTTTCTT+TGG | + | chr8.1:35586460-35586479 | MS.gene008872:intron | 30.0% |
| !!! | GTTATTTTTCTTTGGGTTCA+TGG | + | chr8.1:35586468-35586487 | MS.gene008872:intron | 30.0% |
| !!! | TATTCGAGTTGCAAATGTTT+TGG | + | chr8.1:35587764-35587783 | MS.gene008872:CDS | 30.0% |
| !!! | TTTTTTCTGGATGTGAAACT+GGG | + | chr8.1:35584607-35584626 | MS.gene008872:intron | 30.0% |
| AACGTATTCTGTAGATCTTG+AGG | + | chr8.1:35585829-35585848 | MS.gene008872:intron | 35.0% | |
| AAGCAATGTCAATTGGTAGA+GGG | + | chr8.1:35587946-35587965 | MS.gene008872:CDS | 35.0% | |
| AAGGAATTGGAAAAGAGGAA+TGG | + | chr8.1:35587522-35587541 | MS.gene008872:CDS | 35.0% | |
| AGAATTAGATATGCTGGAGA+AGG | + | chr8.1:35587800-35587819 | MS.gene008872:CDS | 35.0% | |
| AGCTTTCATTTCTTGCATGA+TGG | - | chr8.1:35587304-35587323 | None:intergenic | 35.0% | |
| ATCAATAACCCTTTCAACAC+CGG | - | chr8.1:35587397-35587416 | None:intergenic | 35.0% | |
| CAAGCCTAATGCAAAAACTT+GGG | + | chr8.1:35587860-35587879 | MS.gene008872:CDS | 35.0% | |
| CACTTAAGGAATTGGAAAAG+AGG | + | chr8.1:35587517-35587536 | MS.gene008872:CDS | 35.0% | |
| CGAAATCTTGAAGAAATCTG+TGG | + | chr8.1:35588064-35588083 | MS.gene008872:CDS | 35.0% | |
| CTCTATTATTGTACCCTCAT+CGG | - | chr8.1:35586240-35586259 | None:intergenic | 35.0% | |
| CTGAAAAATCATCTGTGCTA+TGG | + | chr8.1:35587124-35587143 | MS.gene008872:intron | 35.0% | |
| GAAAATAGGCAAAGTATACG+AGG | + | chr8.1:35587590-35587609 | MS.gene008872:CDS | 35.0% | |
| GATATTTGCCATAGGTAACT+GGG | + | chr8.1:35585696-35585715 | MS.gene008872:intron | 35.0% | |
| GCAAAGTATACGAGGTTTAT+AGG | + | chr8.1:35587598-35587617 | MS.gene008872:CDS | 35.0% | |
| GCTGCAGTTAATGATATTTC+CGG | + | chr8.1:35587375-35587394 | MS.gene008872:CDS | 35.0% | |
| GGTTATTAATATCAGGTGGT+GGG | + | chr8.1:35585625-35585644 | MS.gene008872:intron | 35.0% | |
| GGTTATTGATGAGATGAAGA+GGG | + | chr8.1:35587407-35587426 | MS.gene008872:CDS | 35.0% | |
| GTTGCAGTTATCAGAAACAA+CGG | + | chr8.1:35586990-35587009 | MS.gene008872:intron | 35.0% | |
| TGCAAAAATACCTTAAGAGC+AGG | - | chr8.1:35584473-35584492 | None:intergenic | 35.0% | |
| TGGTTATTAATATCAGGTGG+TGG | + | chr8.1:35585624-35585643 | MS.gene008872:intron | 35.0% | |
| TGGTTTATAAAGGAGTGAGA+TGG | + | chr8.1:35586736-35586755 | MS.gene008872:intron | 35.0% | |
| TTATCGGAAGCAATGTCAAT+TGG | + | chr8.1:35587939-35587958 | MS.gene008872:CDS | 35.0% | |
| ! | ATGATATTTCCGGTGTTGAA+AGG | + | chr8.1:35587385-35587404 | MS.gene008872:CDS | 35.0% |
| ! | GGTTAACTTGAAAGATTTCC+CGG | + | chr8.1:35587692-35587711 | MS.gene008872:intron | 35.0% |
| ! | GTCTTTTGCAATTGGTATAG+TGG | + | chr8.1:35585657-35585676 | MS.gene008872:intron | 35.0% |
| ! | GTTAACTTGAAAGATTTCCC+GGG | + | chr8.1:35587693-35587712 | MS.gene008872:intron | 35.0% |
| ! | GTTTTTCTGCGTAATTTAGC+AGG | + | chr8.1:35585564-35585583 | MS.gene008872:intron | 35.0% |
| ! | TGATATTTCCGGTGTTGAAA+GGG | + | chr8.1:35587386-35587405 | MS.gene008872:CDS | 35.0% |
| ! | TTCATTTCTTGCATGATGGA+CGG | - | chr8.1:35587300-35587319 | None:intergenic | 35.0% |
| ! | TTGATGACTACTAAAGCTGA+AGG | + | chr8.1:35587175-35587194 | MS.gene008872:intron | 35.0% |
| ! | TTTTACATCCCCTTCATAAG+TGG | + | chr8.1:35585731-35585750 | MS.gene008872:intron | 35.0% |
| !! | ACAGATGATTTTTCAGACTC+GGG | - | chr8.1:35587120-35587139 | None:intergenic | 35.0% |
| !! | AGAAAAGTGTTTCCGTTAGT+GGG | + | chr8.1:35587719-35587738 | MS.gene008872:intron | 35.0% |
| !! | AGGCTATAAGCTGTTTTCAT+AGG | + | chr8.1:35585147-35585166 | MS.gene008872:intron | 35.0% |
| !! | CACAGATGATTTTTCAGACT+CGG | - | chr8.1:35587121-35587140 | None:intergenic | 35.0% |
| !! | GCGAAATGCAGATTTTAAGT+TGG | + | chr8.1:35587905-35587924 | MS.gene008872:CDS | 35.0% |
| !! | GTTGGCAATGGATTGTTTAT+CGG | + | chr8.1:35587923-35587942 | MS.gene008872:CDS | 35.0% |
| !! | TGATGCTAACTTGTTTGAGA+AGG | + | chr8.1:35587485-35587504 | MS.gene008872:CDS | 35.0% |
| !!! | AGTTGCAAATGTTTTGGTTG+GGG | + | chr8.1:35587770-35587789 | MS.gene008872:CDS | 35.0% |
| !!! | GAGTTGCAAATGTTTTGGTT+GGG | + | chr8.1:35587769-35587788 | MS.gene008872:CDS | 35.0% |
| !!! | GATTTGTGCTTGTTTTAAGG+AGG | + | chr8.1:35586359-35586378 | MS.gene008872:intron | 35.0% |
| !!! | GTGGATTTGTGCTTGTTTTA+AGG | + | chr8.1:35586356-35586375 | MS.gene008872:intron | 35.0% |
| !!! | GTTTTTTCTGGATGTGAAAC+TGG | + | chr8.1:35584606-35584625 | MS.gene008872:intron | 35.0% |
| !!! | TGCAGATTTTAAGTTGGCAA+TGG | + | chr8.1:35587911-35587930 | MS.gene008872:CDS | 35.0% |
| !!! | TGCATTTAAGCGCTTTTTCT+AGG | + | chr8.1:35584489-35584508 | MS.gene008872:intron | 35.0% |
| AAGAAATCTGTGGAATCTGC+AGG | + | chr8.1:35588074-35588093 | MS.gene008872:CDS | 40.0% | |
| AAGCGTAGGATATTTGCCAT+AGG | + | chr8.1:35585688-35585707 | MS.gene008872:intron | 40.0% | |
| AGAAATCTGTGGAATCTGCA+GGG | + | chr8.1:35588075-35588094 | MS.gene008872:CDS | 40.0% | |
| AGTGCATCCAATAAGATACC+AGG | - | chr8.1:35585889-35585908 | None:intergenic | 40.0% | |
| ATATAGCCTCAAGCAACTTC+AGG | - | chr8.1:35588208-35588227 | None:intergenic | 40.0% | |
| ATGTCAATTGGTAGAGGGAA+CGG | + | chr8.1:35587951-35587970 | MS.gene008872:CDS | 40.0% | |
| ATGTCTCTGATGCAACGTTA+CGG | + | chr8.1:35584254-35584273 | MS.gene008872:CDS | 40.0% | |
| ATTGATGAGATGAAGAGGGA+CGG | + | chr8.1:35587411-35587430 | MS.gene008872:CDS | 40.0% | |
| CCAAGCCTAATGCAAAAACT+TGG | + | chr8.1:35587859-35587878 | MS.gene008872:CDS | 40.0% | |
| CCTTCATAAGTGGTGTATGA+CGG | + | chr8.1:35585741-35585760 | MS.gene008872:intron | 40.0% | |
| CGCGTTTATAAATGGGAAGT+TGG | + | chr8.1:35584407-35584426 | MS.gene008872:CDS | 40.0% | |
| CGTCATACACCACTTATGAA+GGG | - | chr8.1:35585743-35585762 | None:intergenic | 40.0% | |
| CTCTAGCTACAAAGCCAAAT+CGG | - | chr8.1:35586434-35586453 | None:intergenic | 40.0% | |
| CTTGCCAAGTACAATAGCAA+CGG | - | chr8.1:35586020-35586039 | None:intergenic | 40.0% | |
| GAAAGCTAGCAATATCATGC+CGG | + | chr8.1:35587317-35587336 | MS.gene008872:CDS | 40.0% | |
| GAAGCAATGTCAATTGGTAG+AGG | + | chr8.1:35587945-35587964 | MS.gene008872:CDS | 40.0% | |
| GATTTGGATGCAAAAGCTAG+AGG | + | chr8.1:35587060-35587079 | MS.gene008872:CDS | 40.0% | |
| GGATATTTGCCATAGGTAAC+TGG | + | chr8.1:35585695-35585714 | MS.gene008872:intron | 40.0% | |
| GGGTTATTGATGAGATGAAG+AGG | + | chr8.1:35587406-35587425 | MS.gene008872:CDS | 40.0% | |
| GTACCTATTGTCTCAGATGA+TGG | - | chr8.1:35587990-35588009 | None:intergenic | 40.0% | |
| GTCATACACCACTTATGAAG+GGG | - | chr8.1:35585742-35585761 | None:intergenic | 40.0% | |
| GTCTTCTTAGTCTGCTTGAA+AGG | + | chr8.1:35586084-35586103 | MS.gene008872:intron | 40.0% | |
| TAGATCTTGAGGAAAGCAGA+CGG | + | chr8.1:35585840-35585859 | MS.gene008872:intron | 40.0% | |
| TATACGAGGTTTATAGGGTC+TGG | + | chr8.1:35587604-35587623 | MS.gene008872:CDS | 40.0% | |
| TATAGCCTCAAGCAACTTCA+GGG | - | chr8.1:35588207-35588226 | None:intergenic | 40.0% | |
| TATGCAACGACGATTGAAGA+TGG | + | chr8.1:35588157-35588176 | MS.gene008872:CDS | 40.0% | |
| TATTATCCTTCAGTCACTCC+AGG | + | chr8.1:35586298-35586317 | MS.gene008872:intron | 40.0% | |
| TCAAAGAAGCCAATCCAGAA+GGG | + | chr8.1:35584892-35584911 | MS.gene008872:intron | 40.0% | |
| TGGTATCTTATTGGATGCAC+TGG | + | chr8.1:35585888-35585907 | MS.gene008872:intron | 40.0% | |
| TTGAAACTCTTCAAAGACGG+TGG | + | chr8.1:35584332-35584351 | MS.gene008872:CDS | 40.0% | |
| ! | AACTTGTTTGAGAAGGCAGA+AGG | + | chr8.1:35587492-35587511 | MS.gene008872:CDS | 40.0% |
| ! | AGAAGGTGCACTTAAGGAAT+TGG | + | chr8.1:35587509-35587528 | MS.gene008872:CDS | 40.0% |
| ! | CCAAGTTTTTGCATTAGGCT+TGG | - | chr8.1:35587862-35587881 | None:intergenic | 40.0% |
| ! | CGCTTCGTCTAAGTACTTTT+TGG | - | chr8.1:35584306-35584325 | None:intergenic | 40.0% |
| ! | GAATCCGTTGCTATTGTACT+TGG | + | chr8.1:35586013-35586032 | MS.gene008872:intron | 40.0% |
| ! | GTTCCATCATCTGAGACAAT+AGG | + | chr8.1:35587984-35588003 | MS.gene008872:CDS | 40.0% |
| ! | TCTCTAAATCTAGAGCTGCA+TGG | - | chr8.1:35586909-35586928 | None:intergenic | 40.0% |
| ! | TGGGAAGCGCGTTTATAAAT+GGG | + | chr8.1:35584400-35584419 | MS.gene008872:CDS | 40.0% |
| ! | TTTGCAATTGGTATAGTGGG+TGG | + | chr8.1:35585661-35585680 | MS.gene008872:intron | 40.0% |
| !! | CAGAAAAGTGTTTCCGTTAG+TGG | + | chr8.1:35587718-35587737 | MS.gene008872:intron | 40.0% |
| !! | CAGATGATTTTTCAGACTCG+GGG | - | chr8.1:35587119-35587138 | None:intergenic | 40.0% |
| !! | TTGCAATTGGTATAGTGGGT+GGG | + | chr8.1:35585662-35585681 | MS.gene008872:intron | 40.0% |
| !!! | ATGATGGACGGAATCTTTTC+TGG | - | chr8.1:35587288-35587307 | None:intergenic | 40.0% |
| !!! | CGAGTTGCAAATGTTTTGGT+TGG | + | chr8.1:35587768-35587787 | MS.gene008872:CDS | 40.0% |
| !!! | GTTTTAGGAAATGCCAACCT+AGG | - | chr8.1:35587636-35587655 | None:intergenic | 40.0% |
| AAGCTCAAGCTCAAAGCTAC+TGG | - | chr8.1:35586163-35586182 | None:intergenic | 45.0% | |
| AAGTCAATCCCAAACCCACT+TGG | + | chr8.1:35585275-35585294 | MS.gene008872:intron | 45.0% | |
| ACTTCTCAACTGCTACTGCA+AGG | + | chr8.1:35587150-35587169 | MS.gene008872:intron | 45.0% | |
| AGATCTTGAGGAAAGCAGAC+GGG | + | chr8.1:35585841-35585860 | MS.gene008872:intron | 45.0% | |
| AGATTCCCTGAAGTTGCTTG+AGG | + | chr8.1:35588199-35588218 | MS.gene008872:CDS | 45.0% | |
| AGCTACGACTTCTTCCTTCT+GGG | - | chr8.1:35586047-35586066 | None:intergenic | 45.0% | |
| AGGAGTGAGATGGTGAACTT+AGG | + | chr8.1:35586746-35586765 | MS.gene008872:intron | 45.0% | |
| AGTCAATCCCAAACCCACTT+GGG | + | chr8.1:35585276-35585295 | MS.gene008872:intron | 45.0% | |
| ATTAGAACTTATGCGGCTGC+TGG | + | chr8.1:35588119-35588138 | MS.gene008872:CDS | 45.0% | |
| CAATCAATAAGCTTCCTGCC+TGG | + | chr8.1:35585868-35585887 | MS.gene008872:intron | 45.0% | |
| CAGTTTACCTCGCCTAACAA+AGG | - | chr8.1:35585543-35585562 | None:intergenic | 45.0% | |
| CATCCAATAAGATACCAGGC+AGG | - | chr8.1:35585885-35585904 | None:intergenic | 45.0% | |
| CCAAATTAGCCCACCGAAAT+TGG | - | chr8.1:35585352-35585371 | None:intergenic | 45.0% | |
| CCGTCATACACCACTTATGA+AGG | - | chr8.1:35585744-35585763 | None:intergenic | 45.0% | |
| CGCTTAAGAAGCTGAGACAA+CGG | + | chr8.1:35584435-35584454 | MS.gene008872:CDS | 45.0% | |
| CTCAAAGAAGCCAATCCAGA+AGG | + | chr8.1:35584891-35584910 | MS.gene008872:intron | 45.0% | |
| CTTCCTGCCTGGTATCTTAT+TGG | + | chr8.1:35585879-35585898 | MS.gene008872:intron | 45.0% | |
| GAAATCTGTGGAATCTGCAG+GGG | + | chr8.1:35588076-35588095 | MS.gene008872:CDS | 45.0% | |
| GAGCAAGAGAAGGATGTTGA+TGG | + | chr8.1:35588026-35588045 | MS.gene008872:CDS | 45.0% | |
| GGAGAAGGCTGAAGAACTAA+AGG | + | chr8.1:35587815-35587834 | MS.gene008872:CDS | 45.0% | |
| GGTTGAAAGTCCCATCCATA+TGG | - | chr8.1:35585780-35585799 | None:intergenic | 45.0% | |
| GTCTACCTGATTCAGTCTAC+TGG | - | chr8.1:35585944-35585963 | None:intergenic | 45.0% | |
| GTTTCAACCTTTGTTAGGCG+AGG | + | chr8.1:35585533-35585552 | MS.gene008872:intron | 45.0% | |
| TACCAGACTATGAGATAGCC+TGG | - | chr8.1:35585914-35585933 | None:intergenic | 45.0% | |
| TAGAGGGAACGGTGAAAAGT+GGG | + | chr8.1:35587962-35587981 | MS.gene008872:CDS | 45.0% | |
| TATCAGAAACAACGGCCAAG+AGG | + | chr8.1:35586998-35587017 | MS.gene008872:CDS | 45.0% | |
| TCCACATAACCACACTAGCA+CGG | - | chr8.1:35586341-35586360 | None:intergenic | 45.0% | |
| TGAAGGGGATGTAAAACACG+CGG | - | chr8.1:35585727-35585746 | None:intergenic | 45.0% | |
| TGCAGCTTGATTCCCACTAA+CGG | - | chr8.1:35587734-35587753 | None:intergenic | 45.0% | |
| TGTCGACACTCCATATGGAT+GGG | + | chr8.1:35585767-35585786 | MS.gene008872:intron | 45.0% | |
| TGTGGATGCTTCAAATGCAG+TGG | + | chr8.1:35586716-35586735 | MS.gene008872:intron | 45.0% | |
| TTATAGATGAGCCGTTCCAC+CGG | - | chr8.1:35585811-35585830 | None:intergenic | 45.0% | |
| TTTGGCTGTGGAATAGCCTT+TGG | + | chr8.1:35585604-35585623 | MS.gene008872:intron | 45.0% | |
| ! | AAGAACTAAAGGAGCGTGCT+CGG | + | chr8.1:35587826-35587845 | MS.gene008872:CDS | 45.0% |
| ! | GTGGGAAGCGCGTTTATAAA+TGG | + | chr8.1:35584399-35584418 | MS.gene008872:CDS | 45.0% |
| !! | AGCTAGAGTGTTGAGAGTCT+TGG | + | chr8.1:35586446-35586465 | MS.gene008872:intron | 45.0% |
| !! | CCAATTTCGGTGGGCTAATT+TGG | + | chr8.1:35585349-35585368 | MS.gene008872:intron | 45.0% |
| !! | TGCAATTGGTATAGTGGGTG+GGG | + | chr8.1:35585663-35585682 | MS.gene008872:intron | 45.0% |
| !!! | TGTCTGTTTTTGGCCTTTCG+TGG | + | chr8.1:35586405-35586424 | MS.gene008872:intron | 45.0% |
| AAAACAGACAACCACGCAGC+AGG | - | chr8.1:35586395-35586414 | None:intergenic | 50.0% | |
| AATCCCAAACCCACTTGGGT+TGG | + | chr8.1:35585280-35585299 | MS.gene008872:intron | 50.0% | |
| ACAGTCAGCTCTCTTACAGC+CGG | + | chr8.1:35585962-35585981 | MS.gene008872:intron | 50.0% | |
| ACGCGGATTCAATAGCAGCT+GGG | - | chr8.1:35586208-35586227 | None:intergenic | 50.0% | |
| ACGGACGAATCACTGGAGAT+TGG | + | chr8.1:35587430-35587449 | MS.gene008872:CDS | 50.0% | |
| ACTTGGCAAGTAAGCCCAGA+AGG | + | chr8.1:35586030-35586049 | MS.gene008872:intron | 50.0% | |
| AGTACCAAGCCAACCCAAGT+GGG | - | chr8.1:35585292-35585311 | None:intergenic | 50.0% | |
| CACTGCCAGTAGACTGAATC+AGG | + | chr8.1:35585936-35585955 | MS.gene008872:intron | 50.0% | |
| CAGCTACGACTTCTTCCTTC+TGG | - | chr8.1:35586048-35586067 | None:intergenic | 50.0% | |
| CGGGATAACCCAGTTACCTA+TGG | - | chr8.1:35585707-35585726 | None:intergenic | 50.0% | |
| CTGTCGACACTCCATATGGA+TGG | + | chr8.1:35585766-35585785 | MS.gene008872:intron | 50.0% | |
| GAAGGGGATGTAAAACACGC+GGG | - | chr8.1:35585726-35585745 | None:intergenic | 50.0% | |
| GACTTTCAACCAAACCGCTC+CGG | + | chr8.1:35585789-35585808 | MS.gene008872:intron | 50.0% | |
| GATCTTGAGGAAAGCAGACG+GGG | + | chr8.1:35585842-35585861 | MS.gene008872:intron | 50.0% | |
| GCCAAATCGGAAACCACGAA+AGG | - | chr8.1:35586421-35586440 | None:intergenic | 50.0% | |
| GCCTTTCGTGGTTTCCGATT+TGG | + | chr8.1:35586417-35586436 | MS.gene008872:intron | 50.0% | |
| GCTGCTATTGAATCCGCGTA+AGG | + | chr8.1:35586209-35586228 | MS.gene008872:intron | 50.0% | |
| GCTTGGTACTCCTCTTCTCA+AGG | + | chr8.1:35585302-35585321 | MS.gene008872:intron | 50.0% | |
| GGTTCTGTCGACACTCCATA+TGG | + | chr8.1:35585762-35585781 | MS.gene008872:intron | 50.0% | |
| GTAGAGGGAACGGTGAAAAG+TGG | + | chr8.1:35587961-35587980 | MS.gene008872:CDS | 50.0% | |
| GTCACTCCAGGTGAGAAGTT+CGG | + | chr8.1:35586310-35586329 | MS.gene008872:intron | 50.0% | |
| GTTGCTTGAGGCTATATCCG+AGG | + | chr8.1:35588211-35588230 | MS.gene008872:CDS | 50.0% | |
| TACGCGGATTCAATAGCAGC+TGG | - | chr8.1:35586209-35586228 | None:intergenic | 50.0% | |
| TTCTCACCTGGAGTGACTGA+AGG | - | chr8.1:35586307-35586326 | None:intergenic | 50.0% | |
| ! | AAGCCAACCCAAGTGGGTTT+GGG | - | chr8.1:35585286-35585305 | None:intergenic | 50.0% |
| ! | ATTCTCCCCGGTGCCAATTT+CGG | + | chr8.1:35585336-35585355 | MS.gene008872:intron | 50.0% |
| ! | CGGAAACACTTTTCTGCTCC+CGG | - | chr8.1:35587714-35587733 | None:intergenic | 50.0% |
| ! | GAAGCACTACGAGCAAGAGA+AGG | + | chr8.1:35588016-35588035 | MS.gene008872:CDS | 50.0% |
| ! | GAAGGCAGAAGGTGCACTTA+AGG | + | chr8.1:35587503-35587522 | MS.gene008872:CDS | 50.0% |
| ! | GCTGCGTGGTTGTCTGTTTT+TGG | + | chr8.1:35586395-35586414 | MS.gene008872:intron | 50.0% |
| ! | GGAAACACTTTTCTGCTCCC+GGG | - | chr8.1:35587713-35587732 | None:intergenic | 50.0% |
| ! | GTTTGATAGTTCCTGCTGCG+TGG | + | chr8.1:35586381-35586400 | MS.gene008872:intron | 50.0% |
| ! | TCTTATTGGATGCACTGGCC+AGG | + | chr8.1:35585893-35585912 | MS.gene008872:intron | 50.0% |
| AAGAGGGACGGACGAATCAC+TGG | + | chr8.1:35587423-35587442 | MS.gene008872:CDS | 55.0% | |
| ATAGGGTCTGGCGTTCTCCT+AGG | + | chr8.1:35587616-35587635 | MS.gene008872:CDS | 55.0% | |
| CAACTCACTAAGGGCCCTTC+TGG | - | chr8.1:35584909-35584928 | None:intergenic | 55.0% | |
| CACTAAGGGCCCTTCTGGAT+TGG | - | chr8.1:35584904-35584923 | None:intergenic | 55.0% | |
| CTAAGAAGACGCCCACGTAG+CGG | - | chr8.1:35586074-35586093 | None:intergenic | 55.0% | |
| CTCATCGGCATCTCCTTACG+CGG | - | chr8.1:35586225-35586244 | None:intergenic | 55.0% | |
| GAACTTATGCGGCTGCTGGT+AGG | + | chr8.1:35588123-35588142 | MS.gene008872:CDS | 55.0% | |
| GAGTACCAAGCCAACCCAAG+TGG | - | chr8.1:35585293-35585312 | None:intergenic | 55.0% | |
| GCACTCGAGACCTTGAGAAG+AGG | - | chr8.1:35585315-35585334 | None:intergenic | 55.0% | |
| GCCGTGCTAGTGTGGTTATG+TGG | + | chr8.1:35586337-35586356 | MS.gene008872:intron | 55.0% | |
| GCGTAAGGAGATGCCGATGA+GGG | + | chr8.1:35586224-35586243 | MS.gene008872:intron | 55.0% | |
| GCTTAGCCGAACTTCTCACC+TGG | - | chr8.1:35586319-35586338 | None:intergenic | 55.0% | |
| GGCCAGGCTATCTCATAGTC+TGG | + | chr8.1:35585909-35585928 | MS.gene008872:intron | 55.0% | |
| TAGCCCACCGAAATTGGCAC+CGG | - | chr8.1:35585346-35585365 | None:intergenic | 55.0% | |
| TGTGGAATCTGCAGGGGAAG+AGG | + | chr8.1:35588082-35588101 | MS.gene008872:CDS | 55.0% | |
| TTTCAACCAAACCGCTCCGG+TGG | + | chr8.1:35585792-35585811 | MS.gene008872:intron | 55.0% | |
| ! | AACTAAAGGAGCGTGCTCGG+AGG | + | chr8.1:35587829-35587848 | MS.gene008872:CDS | 55.0% |
| ! | CAAGCCAACCCAAGTGGGTT+TGG | - | chr8.1:35585287-35585306 | None:intergenic | 55.0% |
| !! | CAAACCCACTTGGGTTGGCT+TGG | + | chr8.1:35585285-35585304 | MS.gene008872:intron | 55.0% |
| ACCAAACCGCTCCGGTGGAA+CGG | + | chr8.1:35585797-35585816 | MS.gene008872:intron | 60.0% | |
| AGCCCACCGAAATTGGCACC+GGG | - | chr8.1:35585345-35585364 | None:intergenic | 60.0% | |
| CGCGTAAGGAGATGCCGATG+AGG | + | chr8.1:35586223-35586242 | MS.gene008872:intron | 60.0% | |
| CGTAGCTGCTACCGCTACGT+GGG | + | chr8.1:35586060-35586079 | MS.gene008872:intron | 60.0% | |
| GGTCTGGCGTTCTCCTAGGT+TGG | + | chr8.1:35587620-35587639 | MS.gene008872:CDS | 60.0% | |
| GTCTCGAGTGCGATTCTCCC+CGG | + | chr8.1:35585324-35585343 | MS.gene008872:intron | 60.0% | |
| TCGGCTAAGCCGTGCTAGTG+TGG | + | chr8.1:35586329-35586348 | MS.gene008872:intron | 60.0% | |
| TCGTAGCTGCTACCGCTACG+TGG | + | chr8.1:35586059-35586078 | MS.gene008872:intron | 60.0% | |
| ! | AAAGGAGCGTGCTCGGAGGA+GGG | + | chr8.1:35587833-35587852 | MS.gene008872:CDS | 60.0% |
| ! | TAAAGGAGCGTGCTCGGAGG+AGG | + | chr8.1:35587832-35587851 | MS.gene008872:CDS | 60.0% |
| ! | TAGTGGGTGGGGAGAAGCGT+AGG | + | chr8.1:35585674-35585693 | MS.gene008872:intron | 60.0% |
| ! | TCCCCGGTGCCAATTTCGGT+GGG | + | chr8.1:35585340-35585359 | MS.gene008872:intron | 60.0% |
| GATGAGCCGTTCCACCGGAG+CGG | - | chr8.1:35585806-35585825 | None:intergenic | 65.0% | |
| GCCCACCGAAATTGGCACCG+GGG | - | chr8.1:35585344-35585363 | None:intergenic | 65.0% | |
| ! | AAGGAGCGTGCTCGGAGGAG+GGG | + | chr8.1:35587834-35587853 | MS.gene008872:CDS | 65.0% |
| ! | CTCCCCGGTGCCAATTTCGG+TGG | + | chr8.1:35585339-35585358 | MS.gene008872:intron | 65.0% |
| GCCGTTCCACCGGAGCGGTT+TGG | - | chr8.1:35585801-35585820 | None:intergenic | 70.0% | |
| ! | AGGAGCGTGCTCGGAGGAGG+GGG | + | chr8.1:35587835-35587854 | MS.gene008872:CDS | 70.0% |
| GGAGCGTGCTCGGAGGAGGG+GGG | + | chr8.1:35587836-35587855 | MS.gene008872:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 35584254 | 35588238 | 35584254 | ID=MS.gene008872 |
| chr8.1 | mRNA | 35584254 | 35588238 | 35584254 | ID=MS.gene008872.t1;Parent=MS.gene008872 |
| chr8.1 | exon | 35584254 | 35584481 | 35584254 | ID=MS.gene008872.t1.exon1;Parent=MS.gene008872.t1 |
| chr8.1 | CDS | 35584254 | 35584481 | 35584254 | ID=cds.MS.gene008872.t1;Parent=MS.gene008872.t1 |
| chr8.1 | exon | 35586997 | 35587137 | 35586997 | ID=MS.gene008872.t1.exon2;Parent=MS.gene008872.t1 |
| chr8.1 | CDS | 35586997 | 35587137 | 35586997 | ID=cds.MS.gene008872.t1;Parent=MS.gene008872.t1 |
| chr8.1 | exon | 35587191 | 35587259 | 35587191 | ID=MS.gene008872.t1.exon3;Parent=MS.gene008872.t1 |
| chr8.1 | CDS | 35587191 | 35587259 | 35587191 | ID=cds.MS.gene008872.t1;Parent=MS.gene008872.t1 |
| chr8.1 | exon | 35587294 | 35587692 | 35587294 | ID=MS.gene008872.t1.exon4;Parent=MS.gene008872.t1 |
| chr8.1 | CDS | 35587294 | 35587692 | 35587294 | ID=cds.MS.gene008872.t1;Parent=MS.gene008872.t1 |
| chr8.1 | exon | 35587738 | 35588238 | 35587738 | ID=MS.gene008872.t1.exon5;Parent=MS.gene008872.t1 |
| chr8.1 | CDS | 35587738 | 35588238 | 35587738 | ID=cds.MS.gene008872.t1;Parent=MS.gene008872.t1 |
| Gene Sequence |
| Protein sequence |
