Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008871.t1 | XP_013446149.1 | 73.9 | 490 | 72 | 2 | 1 | 434 | 1 | 490 | 1.40E-188 | 669.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008871.t1 | O22714 | 47.1 | 495 | 191 | 4 | 4 | 434 | 3 | 490 | 1.2e-119 | 431.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008871.t1 | A0A072TSI9 | 73.9 | 490 | 72 | 2 | 1 | 434 | 1 | 490 | 1.0e-188 | 669.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07314 | MS.gene008871 | PPI |
| MS.gene20884 | MS.gene008871 | PPI |
| MS.gene21177 | MS.gene008871 | PPI |
| MS.gene20868 | MS.gene008871 | PPI |
| MS.gene21180 | MS.gene008871 | PPI |
| MS.gene013110 | MS.gene008871 | PPI |
| MS.gene07313 | MS.gene008871 | PPI |
| MS.gene020461 | MS.gene008871 | PPI |
| MS.gene005487 | MS.gene008871 | PPI |
| MS.gene07317 | MS.gene008871 | PPI |
| MS.gene38571 | MS.gene008871 | PPI |
| MS.gene005504 | MS.gene008871 | PPI |
| MS.gene21232 | MS.gene008871 | PPI |
| MS.gene07318 | MS.gene008871 | PPI |
| MS.gene005505 | MS.gene008871 | PPI |
| MS.gene07338 | MS.gene008871 | PPI |
| MS.gene20867 | MS.gene008871 | PPI |
| MS.gene21234 | MS.gene008871 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008871.t1 | MTR_8g069570 | 84.490 | 490 | 20 | 2 | 1 | 434 | 1 | 490 | 0.0 | 827 |
| MS.gene008871.t1 | MTR_1g086820 | 32.965 | 452 | 236 | 7 | 31 | 428 | 42 | 480 | 1.59e-66 | 220 |
| MS.gene008871.t1 | MTR_1g072300 | 28.636 | 440 | 246 | 8 | 55 | 433 | 69 | 501 | 1.75e-57 | 197 |
| MS.gene008871.t1 | MTR_2g013450 | 26.490 | 453 | 273 | 5 | 24 | 419 | 29 | 478 | 7.96e-50 | 176 |
| MS.gene008871.t1 | MTR_8g465890 | 28.111 | 434 | 246 | 7 | 6 | 377 | 8 | 437 | 6.38e-47 | 168 |
| MS.gene008871.t1 | MTR_2g047855 | 29.227 | 414 | 229 | 9 | 23 | 377 | 31 | 439 | 7.11e-47 | 168 |
| MS.gene008871.t1 | MTR_8g007375 | 26.263 | 396 | 229 | 5 | 89 | 428 | 11 | 399 | 1.65e-42 | 154 |
| MS.gene008871.t1 | MTR_8g059115 | 25.683 | 366 | 215 | 4 | 89 | 399 | 10 | 373 | 1.90e-42 | 154 |
| MS.gene008871.t1 | MTR_3g099753 | 25.210 | 476 | 289 | 9 | 17 | 432 | 34 | 502 | 1.20e-39 | 149 |
| MS.gene008871.t1 | MTR_3g099753 | 25.210 | 476 | 289 | 9 | 17 | 432 | 58 | 526 | 1.87e-39 | 149 |
| MS.gene008871.t1 | MTR_2g090290 | 25.776 | 419 | 243 | 8 | 28 | 382 | 37 | 451 | 6.31e-33 | 130 |
| MS.gene008871.t1 | MTR_1g022400 | 33.054 | 239 | 130 | 3 | 43 | 251 | 74 | 312 | 2.12e-29 | 119 |
| MS.gene008871.t1 | MTR_7g089770 | 22.747 | 466 | 300 | 9 | 15 | 428 | 150 | 607 | 9.11e-28 | 116 |
| MS.gene008871.t1 | MTR_1g050750 | 24.324 | 444 | 268 | 8 | 35 | 421 | 102 | 534 | 1.75e-25 | 109 |
| MS.gene008871.t1 | MTR_7g017570 | 29.442 | 197 | 131 | 4 | 142 | 338 | 331 | 519 | 3.71e-16 | 81.3 |
| MS.gene008871.t1 | MTR_8g031520 | 27.551 | 196 | 112 | 2 | 24 | 189 | 105 | 300 | 5.20e-16 | 78.6 |
| MS.gene008871.t1 | MTR_2g096880 | 21.882 | 457 | 292 | 11 | 38 | 434 | 58 | 509 | 6.43e-16 | 80.1 |
| MS.gene008871.t1 | MTR_4g107210 | 24.199 | 281 | 194 | 6 | 62 | 338 | 109 | 374 | 1.20e-15 | 79.7 |
| MS.gene008871.t1 | MTR_3g115270 | 23.264 | 288 | 184 | 4 | 151 | 409 | 302 | 581 | 3.20e-13 | 72.0 |
| MS.gene008871.t1 | MTR_1g031720 | 24.339 | 189 | 135 | 2 | 133 | 321 | 455 | 635 | 3.49e-13 | 72.4 |
| MS.gene008871.t1 | MTR_8g031510 | 26.012 | 173 | 121 | 3 | 256 | 428 | 1 | 166 | 1.53e-12 | 66.2 |
| MS.gene008871.t1 | MTR_3g033040 | 23.529 | 255 | 179 | 5 | 151 | 403 | 188 | 428 | 1.91e-12 | 69.3 |
| MS.gene008871.t1 | MTR_3g033040 | 23.529 | 255 | 179 | 5 | 151 | 403 | 188 | 428 | 2.74e-12 | 68.9 |
| MS.gene008871.t1 | MTR_5g029690 | 23.507 | 268 | 185 | 6 | 45 | 308 | 451 | 702 | 7.37e-12 | 67.8 |
| MS.gene008871.t1 | MTR_1g112240 | 21.495 | 321 | 208 | 7 | 97 | 387 | 249 | 555 | 9.58e-12 | 67.4 |
| MS.gene008871.t1 | MTR_7g017530 | 25.389 | 193 | 136 | 4 | 142 | 334 | 296 | 480 | 1.19e-11 | 67.4 |
| MS.gene008871.t1 | MTR_1g114300 | 25.000 | 232 | 158 | 4 | 147 | 377 | 297 | 513 | 1.41e-11 | 66.6 |
| MS.gene008871.t1 | MTR_6g068790 | 25.128 | 195 | 131 | 3 | 126 | 320 | 353 | 532 | 1.43e-11 | 66.6 |
| MS.gene008871.t1 | MTR_0014s0180 | 25.521 | 192 | 128 | 3 | 126 | 317 | 344 | 520 | 2.20e-11 | 66.2 |
| MS.gene008871.t1 | MTR_3g105900 | 22.353 | 340 | 190 | 8 | 144 | 418 | 249 | 579 | 4.98e-11 | 65.5 |
| MS.gene008871.t1 | MTR_6g078160 | 26.154 | 195 | 129 | 4 | 126 | 320 | 339 | 518 | 5.29e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008871.t1 | AT1G60770 | 56.352 | 488 | 156 | 3 | 4 | 434 | 3 | 490 | 0.0 | 570 |
| MS.gene008871.t1 | AT1G02370 | 35.776 | 464 | 240 | 4 | 25 | 431 | 73 | 535 | 1.21e-87 | 277 |
| MS.gene008871.t1 | AT4G01990 | 34.238 | 479 | 248 | 8 | 12 | 431 | 30 | 500 | 4.86e-77 | 248 |
| MS.gene008871.t1 | AT4G02820 | 29.932 | 441 | 245 | 7 | 50 | 433 | 88 | 521 | 7.69e-59 | 201 |
| MS.gene008871.t1 | AT1G02150 | 29.932 | 441 | 247 | 6 | 2 | 383 | 46 | 483 | 1.96e-55 | 192 |
| MS.gene008871.t1 | AT4G21705 | 26.552 | 467 | 283 | 6 | 24 | 432 | 26 | 490 | 1.89e-51 | 181 |
| MS.gene008871.t1 | AT5G27460 | 26.490 | 453 | 267 | 7 | 28 | 418 | 43 | 491 | 1.14e-42 | 157 |
| MS.gene008871.t1 | AT2G20710 | 25.057 | 439 | 263 | 8 | 23 | 403 | 38 | 468 | 1.09e-36 | 140 |
| MS.gene008871.t1 | AT2G20710 | 26.216 | 370 | 208 | 7 | 91 | 403 | 12 | 373 | 2.57e-33 | 129 |
| MS.gene008871.t1 | AT5G09450 | 29.010 | 293 | 162 | 6 | 43 | 300 | 75 | 356 | 6.23e-28 | 114 |
| MS.gene008871.t1 | AT1G80270 | 24.379 | 443 | 266 | 11 | 37 | 421 | 142 | 573 | 5.31e-26 | 111 |
| MS.gene008871.t1 | AT1G80270 | 24.379 | 443 | 266 | 11 | 37 | 421 | 142 | 573 | 5.31e-26 | 111 |
| MS.gene008871.t1 | AT1G80270 | 24.379 | 443 | 266 | 11 | 37 | 421 | 142 | 573 | 5.31e-26 | 111 |
| MS.gene008871.t1 | AT1G80270 | 24.379 | 443 | 266 | 11 | 37 | 421 | 142 | 573 | 5.31e-26 | 111 |
| MS.gene008871.t1 | AT1G80270 | 24.379 | 443 | 266 | 11 | 37 | 421 | 142 | 573 | 5.31e-26 | 111 |
| MS.gene008871.t1 | AT1G15480 | 23.490 | 447 | 269 | 9 | 35 | 421 | 138 | 571 | 9.16e-22 | 98.2 |
| MS.gene008871.t1 | AT1G28020 | 25.977 | 435 | 244 | 12 | 40 | 405 | 60 | 485 | 5.68e-21 | 95.5 |
| MS.gene008871.t1 | AT3G15590 | 22.907 | 454 | 281 | 10 | 31 | 422 | 141 | 587 | 8.20e-20 | 92.4 |
| MS.gene008871.t1 | AT3G15590 | 22.907 | 454 | 281 | 10 | 31 | 422 | 141 | 587 | 8.20e-20 | 92.4 |
| MS.gene008871.t1 | AT5G42310 | 24.542 | 273 | 186 | 7 | 151 | 420 | 325 | 580 | 7.04e-15 | 77.4 |
| MS.gene008871.t1 | AT2G35130 | 23.547 | 344 | 213 | 8 | 74 | 384 | 245 | 571 | 1.80e-14 | 75.9 |
| MS.gene008871.t1 | AT2G35130 | 23.547 | 344 | 213 | 8 | 74 | 384 | 248 | 574 | 1.89e-14 | 75.9 |
| MS.gene008871.t1 | AT2G35130 | 23.547 | 344 | 213 | 8 | 74 | 384 | 270 | 596 | 2.13e-14 | 75.9 |
| MS.gene008871.t1 | AT3G11380 | 26.182 | 275 | 159 | 6 | 62 | 300 | 82 | 348 | 9.94e-14 | 73.6 |
| MS.gene008871.t1 | AT1G03560 | 21.555 | 283 | 206 | 4 | 144 | 425 | 201 | 468 | 7.34e-12 | 67.8 |
| MS.gene008871.t1 | AT3G06430 | 21.824 | 307 | 221 | 5 | 98 | 403 | 97 | 385 | 1.13e-11 | 67.0 |
| MS.gene008871.t1 | AT5G02860 | 23.607 | 305 | 203 | 7 | 124 | 423 | 244 | 523 | 2.21e-11 | 66.6 |
| MS.gene008871.t1 | AT5G02860 | 26.471 | 204 | 134 | 3 | 144 | 343 | 503 | 694 | 9.15e-11 | 64.7 |
| MS.gene008871.t1 | AT5G02860 | 23.607 | 305 | 203 | 7 | 124 | 423 | 244 | 523 | 2.21e-11 | 66.6 |
| MS.gene008871.t1 | AT5G02860 | 26.471 | 204 | 134 | 3 | 144 | 343 | 503 | 694 | 9.15e-11 | 64.7 |
| MS.gene008871.t1 | AT5G02860 | 23.607 | 305 | 203 | 7 | 124 | 423 | 244 | 523 | 2.21e-11 | 66.6 |
| MS.gene008871.t1 | AT5G02860 | 26.471 | 204 | 134 | 3 | 144 | 343 | 503 | 694 | 9.15e-11 | 64.7 |
| MS.gene008871.t1 | AT5G02860 | 23.607 | 305 | 203 | 7 | 124 | 423 | 244 | 523 | 2.21e-11 | 66.6 |
| MS.gene008871.t1 | AT5G02860 | 26.471 | 204 | 134 | 3 | 144 | 343 | 503 | 694 | 9.15e-11 | 64.7 |
| MS.gene008871.t1 | AT5G02860 | 23.607 | 305 | 203 | 7 | 124 | 423 | 244 | 523 | 2.21e-11 | 66.6 |
| MS.gene008871.t1 | AT5G02860 | 26.471 | 204 | 134 | 3 | 144 | 343 | 503 | 694 | 9.15e-11 | 64.7 |
| MS.gene008871.t1 | AT5G48730 | 21.708 | 281 | 197 | 7 | 122 | 400 | 184 | 443 | 2.54e-11 | 65.9 |
| MS.gene008871.t1 | AT1G77360 | 23.295 | 352 | 230 | 11 | 52 | 396 | 99 | 417 | 8.20e-11 | 64.3 |
Find 85 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCAGTTAATGATATTT+CGG | 0.213004 | 8.1:+35583024 | MS.gene008871:CDS |
| ATTGCATTGTATGGGAAAAT+AGG | 0.246284 | 8.1:+35583226 | MS.gene008871:CDS |
| GCTGCAGTTAATGATATTTC+GGG | 0.262141 | 8.1:+35583025 | MS.gene008871:CDS |
| CAGTTTCTAATTGCATTGTA+TGG | 0.296804 | 8.1:+35583217 | MS.gene008871:CDS |
| ATATAGCCTCAAGCAACTTA+TGG | 0.298617 | 8.1:-35583855 | None:intergenic |
| GTGGTAAGCGCGTTTATAAA+TGG | 0.325159 | 8.1:+35580862 | MS.gene008871:CDS |
| CGAGTTGCAAATGTATTGAT+AGG | 0.332634 | 8.1:+35583418 | MS.gene008871:CDS |
| CCAAGCTATACATATTGATT+TGG | 0.346564 | 8.1:+35582690 | MS.gene008871:CDS |
| ATTATATCAACCTGCTCTTA+AGG | 0.369801 | 8.1:+35580923 | MS.gene008871:CDS |
| CATACAATGCAATTAGAAAC+TGG | 0.399606 | 8.1:-35583216 | None:intergenic |
| TATAGCCTCAAGCAACTTAT+GGG | 0.416214 | 8.1:-35583854 | None:intergenic |
| TAAAATCTGCATTCCGCAAA+TGG | 0.426781 | 8.1:-35583549 | None:intergenic |
| GGAGAAGGCTGAAGAAATAA+AGG | 0.429471 | 8.1:+35583465 | MS.gene008871:CDS |
| GGTCTTTATCATATTCCTCT+TGG | 0.433190 | 8.1:-35582659 | None:intergenic |
| AAGAAATCTGTGGAATCTCT+AGG | 0.439531 | 8.1:+35583724 | MS.gene008871:CDS |
| ACATTATATGTGTAAGAATC+CGG | 0.442518 | 8.1:-35582986 | None:intergenic |
| GGAAAGTGCACTTAAGGAAT+TGG | 0.443773 | 8.1:+35583159 | MS.gene008871:CDS |
| ATTCTTACACATATAATGTA+TGG | 0.452805 | 8.1:+35582990 | MS.gene008871:CDS |
| CGCGTTTATAAATGGGAAGT+TGG | 0.453242 | 8.1:+35580870 | MS.gene008871:CDS |
| GATGGCGGAAAGTGCACTTA+AGG | 0.456780 | 8.1:+35583153 | MS.gene008871:CDS |
| CAGAAAAGTGTTTCCGTGAG+TGG | 0.460026 | 8.1:+35583368 | MS.gene008871:CDS |
| TGATATTTCGGGTGTTGAAA+GGG | 0.472069 | 8.1:+35583036 | MS.gene008871:CDS |
| GCAGAGGGAATGGTGAAAAG+TGG | 0.476052 | 8.1:+35583611 | MS.gene008871:CDS |
| ATACCTATTGTCTCAGATGA+TGG | 0.482076 | 8.1:-35583637 | None:intergenic |
| AGTTTCTAATTGCATTGTAT+GGG | 0.482705 | 8.1:+35583218 | MS.gene008871:CDS |
| TGGTAAGCGCGTTTATAAAT+GGG | 0.483432 | 8.1:+35580863 | MS.gene008871:CDS |
| ATGATATTTCGGGTGTTGAA+AGG | 0.485581 | 8.1:+35583035 | MS.gene008871:CDS |
| GTTCCATCATCTGAGACAAT+AGG | 0.486056 | 8.1:+35583634 | MS.gene008871:CDS |
| TTATCCGAGGCAATCTCAAT+TGG | 0.489356 | 8.1:+35583589 | MS.gene008871:CDS |
| ATCTCAATTGGCAGAGGGAA+TGG | 0.491176 | 8.1:+35583601 | MS.gene008871:CDS |
| AGGAGCGTGCTCGAAGGAGG+GGG | 0.492105 | 8.1:+35583485 | MS.gene008871:CDS |
| CTTAATCAGTTTATTAAGAG+TGG | 0.492152 | 8.1:+35580843 | MS.gene008871:CDS |
| AGAAATCTGTGGAATCTCTA+GGG | 0.508497 | 8.1:+35583725 | MS.gene008871:CDS |
| GAGCAAGAGAAGGATGTTGA+TGG | 0.508667 | 8.1:+35583676 | MS.gene008871:CDS |
| CCAAATCAATATGTATAGCT+TGG | 0.509051 | 8.1:-35582690 | None:intergenic |
| ATATGCAAAATTAAATATGC+TGG | 0.510071 | 8.1:+35583444 | MS.gene008871:CDS |
| GAGTTGCAAATGTATTGATA+GGG | 0.511075 | 8.1:+35583419 | MS.gene008871:CDS |
| ATGTCTCTGATGCAACGTTA+CGG | 0.511411 | 8.1:+35580717 | MS.gene008871:CDS |
| ATTAGAACTTATGCAGCTGC+TGG | 0.514793 | 8.1:+35583769 | MS.gene008871:CDS |
| CAGGTTGATATAATTTCCGT+TGG | 0.517340 | 8.1:-35580914 | None:intergenic |
| GTCTATCATTCAAGAAATGA+AGG | 0.517364 | 8.1:+35582949 | MS.gene008871:CDS |
| TTCATTTCTTGAATGATAGA+CGG | 0.521747 | 8.1:-35582947 | None:intergenic |
| ATGGTCGAGTCACTAGAGAT+TGG | 0.524207 | 8.1:+35583080 | MS.gene008871:CDS |
| CGCTTAAGAAGCTTCGCCAA+CGG | 0.533742 | 8.1:+35580898 | MS.gene008871:CDS |
| AAAGGAGCGTGCTCGAAGGA+GGG | 0.535699 | 8.1:+35583483 | MS.gene008871:CDS |
| TGTGGAATCTCTAGGGGAAG+AGG | 0.535857 | 8.1:+35583732 | MS.gene008871:CDS |
| GGGTTATTGATGAGATGAAG+AGG | 0.539631 | 8.1:+35583056 | MS.gene008871:CDS |
| AAAATTAAATATGCTGGAGA+AGG | 0.558464 | 8.1:+35583450 | MS.gene008871:CDS |
| AAGGAGCGTGCTCGAAGGAG+GGG | 0.560180 | 8.1:+35583484 | MS.gene008871:CDS |
| GGTTATTGATGAGATGAAGA+GGG | 0.563994 | 8.1:+35583057 | MS.gene008871:CDS |
| AAGGAATTGGAGAAGAGGAA+TGG | 0.564531 | 8.1:+35583172 | MS.gene008871:CDS |
| TGCTAACTTGTTTGAGATGG+CGG | 0.566426 | 8.1:+35583138 | MS.gene008871:CDS |
| TGATGCTAACTTGTTTGAGA+TGG | 0.576175 | 8.1:+35583135 | MS.gene008871:CDS |
| CAGAGGGAATGGTGAAAAGT+GGG | 0.578045 | 8.1:+35583612 | MS.gene008871:CDS |
| TACTTGAAACTCTTCAAAGA+CGG | 0.580431 | 8.1:+35580792 | MS.gene008871:CDS |
| AGAAAAGTGTTTCCGTGAGT+GGG | 0.581496 | 8.1:+35583369 | MS.gene008871:CDS |
| TATGCAACGACGATTGAAGA+TGG | 0.587542 | 8.1:+35583807 | MS.gene008871:CDS |
| GGAGCGTGCTCGAAGGAGGG+GGG | 0.589401 | 8.1:+35583486 | MS.gene008871:CDS |
| GTTGCAGCTATCAGAAACAA+TGG | 0.589715 | 8.1:+35582636 | MS.gene008871:intron |
| CACTTAAGGAATTGGAGAAG+AGG | 0.589748 | 8.1:+35583167 | MS.gene008871:CDS |
| CGAAATCTTGAAGAAATCTG+TGG | 0.590780 | 8.1:+35583714 | MS.gene008871:CDS |
| GAGGCAATCTCAATTGGCAG+AGG | 0.596441 | 8.1:+35583595 | MS.gene008871:CDS |
| GGTTGTGGATTGTTTATCCG+AGG | 0.596446 | 8.1:+35583576 | MS.gene008871:CDS |
| TAAAGGAGCGTGCTCGAAGG+AGG | 0.597008 | 8.1:+35583482 | MS.gene008871:CDS |
| AATTTACATGAATCACTCCT+CGG | 0.599378 | 8.1:-35583878 | None:intergenic |
| GAACTTATGCAGCTGCTGGT+AGG | 0.604154 | 8.1:+35583773 | MS.gene008871:CDS |
| ATGTATAGCTTGGTCACTGA+CGG | 0.607677 | 8.1:-35582680 | None:intergenic |
| TGCAGCTTGATTCCCACTCA+CGG | 0.609199 | 8.1:-35583381 | None:intergenic |
| AGTTGCAAATGTATTGATAG+GGG | 0.611891 | 8.1:+35583420 | MS.gene008871:CDS |
| TCTGCCAATTGAGATTGCCT+CGG | 0.611905 | 8.1:-35583593 | None:intergenic |
| CATCAACATAAATAGACGCA+AGG | 0.616654 | 8.1:-35583117 | None:intergenic |
| TTGAAACTCTTCAAAGACGG+TGG | 0.620058 | 8.1:+35580795 | MS.gene008871:CDS |
| GATTTGGCTGCAAAAGCTAG+AGG | 0.623456 | 8.1:+35582706 | MS.gene008871:CDS |
| GAAGGCTAGCAATATCATGC+CGG | 0.629396 | 8.1:+35582967 | MS.gene008871:CDS |
| GAAGCACTACGAGCAAGAGA+AGG | 0.634627 | 8.1:+35583666 | MS.gene008871:CDS |
| AGGCAATCTCAATTGGCAGA+GGG | 0.636425 | 8.1:+35583596 | MS.gene008871:CDS |
| GAAATCTGTGGAATCTCTAG+GGG | 0.639197 | 8.1:+35583726 | MS.gene008871:CDS |
| GTTAACTTGAAAGATCTCCC+AGG | 0.640592 | 8.1:+35583343 | MS.gene008871:CDS |
| ATTGATGAGATGAAGAGGGA+TGG | 0.641079 | 8.1:+35583061 | MS.gene008871:CDS |
| ACTTCTCAACTGCTACTGCA+AGG | 0.646187 | 8.1:+35582798 | MS.gene008871:CDS |
| AAATAAAGGAGCGTGCTCGA+AGG | 0.661855 | 8.1:+35583479 | MS.gene008871:CDS |
| TATCAGAAACAATGGCCAAG+AGG | 0.670222 | 8.1:+35582644 | MS.gene008871:CDS |
| AGATGCCCATAAGTTGCTTG+AGG | 0.673041 | 8.1:+35583849 | MS.gene008871:CDS |
| GTTGCTTGAGGCTATATCCG+AGG | 0.687725 | 8.1:+35583861 | MS.gene008871:CDS |
| TTGATGACTGATAAAGCTGA+AGG | 0.694285 | 8.1:+35582823 | MS.gene008871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTTATAATTATATTCA+TGG | + | chr8.1:35582593-35582612 | MS.gene008871:intron | 10.0% |
| !! | TGAAAAATAAGATTATATAT+TGG | + | chr8.1:35581009-35581028 | MS.gene008871:intron | 10.0% |
| !!! | GTTAACTTTTTTTTTTTTTT+GGG | - | chr8.1:35581774-35581793 | None:intergenic | 10.0% |
| !! | AATAAAATGATATATTAGCT+TGG | + | chr8.1:35581852-35581871 | MS.gene008871:intron | 15.0% |
| !! | ATTGAAAATAATAATAACCT+AGG | - | chr8.1:35580972-35580991 | None:intergenic | 15.0% |
| !!! | ATAAAATGATATATTAGCTT+GGG | + | chr8.1:35581853-35581872 | MS.gene008871:intron | 15.0% |
| !!! | GCAAATTGTTAATTTTTTTT+TGG | + | chr8.1:35581990-35582009 | MS.gene008871:intron | 15.0% |
| !!! | GGTTAACTTTTTTTTTTTTT+TGG | - | chr8.1:35581775-35581794 | None:intergenic | 15.0% |
| !! | AACTTGAAAAACTCATTATA+TGG | - | chr8.1:35582383-35582402 | None:intergenic | 20.0% |
| !! | ATATGCAAAATTAAATATGC+TGG | + | chr8.1:35583444-35583463 | MS.gene008871:CDS | 20.0% |
| !! | ATGTCAAAAAACTAATTGAT+TGG | + | chr8.1:35582307-35582326 | MS.gene008871:intron | 20.0% |
| !! | ATTCTTACACATATAATGTA+TGG | + | chr8.1:35582990-35583009 | MS.gene008871:CDS | 20.0% |
| !! | TATCATAGAATCATAAAATG+AGG | + | chr8.1:35581895-35581914 | MS.gene008871:intron | 20.0% |
| !! | TTTGTAGAATTTATGAAAGT+AGG | + | chr8.1:35581215-35581234 | MS.gene008871:intron | 20.0% |
| !!! | AAAAACTTGGGAAATATTTT+TGG | + | chr8.1:35583522-35583541 | MS.gene008871:CDS | 20.0% |
| !!! | AATAAGATTATATATTGGCT+TGG | + | chr8.1:35581014-35581033 | MS.gene008871:intron | 20.0% |
| !!! | AATCAATTAGTTTTTTGACA+TGG | - | chr8.1:35582308-35582327 | None:intergenic | 20.0% |
| !!! | ATCAACAAAATATTTTTCAG+CGG | - | chr8.1:35582740-35582759 | None:intergenic | 20.0% |
| !!! | TTTTTGTTATATGTTCTGTT+TGG | + | chr8.1:35581053-35581072 | MS.gene008871:intron | 20.0% |
| ! | AAAATTAAATATGCTGGAGA+AGG | + | chr8.1:35583450-35583469 | MS.gene008871:CDS | 25.0% |
| ! | ACATTATATGTGTAAGAATC+CGG | - | chr8.1:35582989-35583008 | None:intergenic | 25.0% |
| ! | AGTTTCTAATTGCATTGTAT+GGG | + | chr8.1:35583218-35583237 | MS.gene008871:CDS | 25.0% |
| ! | ATGACTCTTTATACTAAAGT+AGG | + | chr8.1:35582908-35582927 | MS.gene008871:intron | 25.0% |
| ! | CAAAGTATACGAAGTTTATA+GGG | + | chr8.1:35583249-35583268 | MS.gene008871:intron | 25.0% |
| ! | CATGTACACTTAACATATAA+GGG | + | chr8.1:35581440-35581459 | MS.gene008871:intron | 25.0% |
| ! | CTTAATCAGTTTATTAAGAG+TGG | + | chr8.1:35580843-35580862 | MS.gene008871:CDS | 25.0% |
| ! | GAGTTGTAGTTTATGAATTA+TGG | + | chr8.1:35581354-35581373 | MS.gene008871:intron | 25.0% |
| ! | TTCATTTCTTGAATGATAGA+CGG | - | chr8.1:35582950-35582969 | None:intergenic | 25.0% |
| !! | ACTAAGTTGAAAATAATCGA+TGG | + | chr8.1:35581563-35581582 | MS.gene008871:intron | 25.0% |
| !!! | GTTAATTTTTTTTTGGTGTG+TGG | + | chr8.1:35581997-35582016 | MS.gene008871:intron | 25.0% |
| !!! | TATTTTTGGATTACCATTTG+CGG | + | chr8.1:35583536-35583555 | MS.gene008871:CDS | 25.0% |
| AACTTAGAAACACGCAAATT+TGG | - | chr8.1:35581797-35581816 | None:intergenic | 30.0% | |
| AAGCATTTATGAGCATGTTT+GGG | - | chr8.1:35581618-35581637 | None:intergenic | 30.0% | |
| AAGCTATCTGAATATGATTC+AGG | + | chr8.1:35583315-35583334 | MS.gene008871:intron | 30.0% | |
| ACTTAGAAACACGCAAATTT+GGG | - | chr8.1:35581796-35581815 | None:intergenic | 30.0% | |
| AGCAAAAAACCAATTGCAAA+AGG | - | chr8.1:35582076-35582095 | None:intergenic | 30.0% | |
| ATTATATCAACCTGCTCTTA+AGG | + | chr8.1:35580923-35580942 | MS.gene008871:CDS | 30.0% | |
| ATTGCATTGTATGGGAAAAT+AGG | + | chr8.1:35583226-35583245 | MS.gene008871:CDS | 30.0% | |
| CAGTTTCTAATTGCATTGTA+TGG | + | chr8.1:35583217-35583236 | MS.gene008871:CDS | 30.0% | |
| CATAAACTACAACTCACTAA+GGG | - | chr8.1:35581349-35581368 | None:intergenic | 30.0% | |
| CATACAATGCAATTAGAAAC+TGG | - | chr8.1:35583219-35583238 | None:intergenic | 30.0% | |
| CCAAATCAATATGTATAGCT+TGG | - | chr8.1:35582693-35582712 | None:intergenic | 30.0% | |
| GAATGCTTATGATATGAACT+TGG | + | chr8.1:35581390-35581409 | MS.gene008871:intron | 30.0% | |
| GCAAAGTATACGAAGTTTAT+AGG | + | chr8.1:35583248-35583267 | MS.gene008871:intron | 30.0% | |
| GCATGTACACTTAACATATA+AGG | + | chr8.1:35581439-35581458 | MS.gene008871:intron | 30.0% | |
| GTCTATCATTCAAGAAATGA+AGG | + | chr8.1:35582949-35582968 | MS.gene008871:CDS | 30.0% | |
| TAAGCATTTATGAGCATGTT+TGG | - | chr8.1:35581619-35581638 | None:intergenic | 30.0% | |
| TAATATCCAAGCAGAACTAA+AGG | - | chr8.1:35582028-35582047 | None:intergenic | 30.0% | |
| TACTTGAAACTCTTCAAAGA+CGG | + | chr8.1:35580792-35580811 | MS.gene008871:CDS | 30.0% | |
| TATGTTCTGTTTGGATAAAC+AGG | + | chr8.1:35581062-35581081 | MS.gene008871:intron | 30.0% | |
| TCAAATTAGCCAATCTAGAA+GGG | + | chr8.1:35581323-35581342 | MS.gene008871:intron | 30.0% | |
| TCATAAACTACAACTCACTA+AGG | - | chr8.1:35581350-35581369 | None:intergenic | 30.0% | |
| TCTGCTTGGATATTAATATC+AGG | + | chr8.1:35582033-35582052 | MS.gene008871:intron | 30.0% | |
| TGCTGCAGTTAATGATATTT+CGG | + | chr8.1:35583024-35583043 | MS.gene008871:CDS | 30.0% | |
| ! | AGTTGCAAATGTATTGATAG+GGG | + | chr8.1:35583420-35583439 | MS.gene008871:CDS | 30.0% |
| ! | ATGATATATTAGCTTGGGTT+TGG | + | chr8.1:35581858-35581877 | MS.gene008871:intron | 30.0% |
| ! | ATTTCCCAAGTTTTTGCATT+AGG | - | chr8.1:35583517-35583536 | None:intergenic | 30.0% |
| ! | CCAAGCTATACATATTGATT+TGG | + | chr8.1:35582690-35582709 | MS.gene008871:CDS | 30.0% |
| ! | GAGTTGCAAATGTATTGATA+GGG | + | chr8.1:35583419-35583438 | MS.gene008871:CDS | 30.0% |
| ! | GTTTTTCTGCATAATTTAGC+AGG | + | chr8.1:35581968-35581987 | MS.gene008871:intron | 30.0% |
| ! | TAGCTTATGTTTGCAGTTTT+AGG | - | chr8.1:35583301-35583320 | None:intergenic | 30.0% |
| !! | TAGTTGTAAGCTGTTTTCAT+CGG | + | chr8.1:35581520-35581539 | MS.gene008871:intron | 30.0% |
| !! | TCTGAATATGATTCAGGTTT+TGG | + | chr8.1:35583321-35583340 | MS.gene008871:intron | 30.0% |
| !!! | ACTCTTGGTTATTTTTCTTG+GGG | + | chr8.1:35582212-35582231 | MS.gene008871:intron | 30.0% |
| !!! | AGACTCTTGGTTATTTTTCT+TGG | + | chr8.1:35582210-35582229 | MS.gene008871:intron | 30.0% |
| !!! | GACTCTTGGTTATTTTTCTT+GGG | + | chr8.1:35582211-35582230 | MS.gene008871:intron | 30.0% |
| !!! | TTGCAATTGGTTTTTTGCTA+GGG | + | chr8.1:35582077-35582096 | MS.gene008871:intron | 30.0% |
| !!! | TTTGCAATTGGTTTTTTGCT+AGG | + | chr8.1:35582076-35582095 | MS.gene008871:intron | 30.0% |
| AAAAATGGACAACCACAAAG+AGG | - | chr8.1:35582163-35582182 | None:intergenic | 35.0% | |
| AAAATGGACAACCACAAAGA+GGG | - | chr8.1:35582162-35582181 | None:intergenic | 35.0% | |
| AAACCACAAAAGGCCAAAAA+TGG | - | chr8.1:35582178-35582197 | None:intergenic | 35.0% | |
| AAATGACTCACCCAAATACA+AGG | - | chr8.1:35582270-35582289 | None:intergenic | 35.0% | |
| AAGAAATCTGTGGAATCTCT+AGG | + | chr8.1:35583724-35583743 | MS.gene008871:CDS | 35.0% | |
| AGAAATCTGTGGAATCTCTA+GGG | + | chr8.1:35583725-35583744 | MS.gene008871:CDS | 35.0% | |
| ATACCTATTGTCTCAGATGA+TGG | - | chr8.1:35583640-35583659 | None:intergenic | 35.0% | |
| ATATAGCCTCAAGCAACTTA+TGG | - | chr8.1:35583858-35583877 | None:intergenic | 35.0% | |
| CAAGCCTAATGCAAAAACTT+GGG | + | chr8.1:35583510-35583529 | MS.gene008871:CDS | 35.0% | |
| CATCAACATAAATAGACGCA+AGG | - | chr8.1:35583120-35583139 | None:intergenic | 35.0% | |
| CGAAATCTTGAAGAAATCTG+TGG | + | chr8.1:35583714-35583733 | MS.gene008871:CDS | 35.0% | |
| CTATCAAACCTCCTTAAAAC+AGG | - | chr8.1:35582137-35582156 | None:intergenic | 35.0% | |
| CTCAAATTAGCCAATCTAGA+AGG | + | chr8.1:35581322-35581341 | MS.gene008871:intron | 35.0% | |
| GCTAATTTGAGCTTATCTAC+AGG | - | chr8.1:35581313-35581332 | None:intergenic | 35.0% | |
| GCTGCAGTTAATGATATTTC+GGG | + | chr8.1:35583025-35583044 | MS.gene008871:CDS | 35.0% | |
| GCTTGGATATTAATATCAGG+TGG | + | chr8.1:35582036-35582055 | MS.gene008871:intron | 35.0% | |
| GGATATTAATATCAGGTGGT+GGG | + | chr8.1:35582040-35582059 | MS.gene008871:intron | 35.0% | |
| GGTCTTTATCATATTCCTCT+TGG | - | chr8.1:35582662-35582681 | None:intergenic | 35.0% | |
| GGTTATTGATGAGATGAAGA+GGG | + | chr8.1:35583057-35583076 | MS.gene008871:CDS | 35.0% | |
| TAAAATCTGCATTCCGCAAA+TGG | - | chr8.1:35583552-35583571 | None:intergenic | 35.0% | |
| TATACGAAGTTTATAGGGTC+TGG | + | chr8.1:35583254-35583273 | MS.gene008871:intron | 35.0% | |
| TATAGCCTCAAGCAACTTAT+GGG | - | chr8.1:35583857-35583876 | None:intergenic | 35.0% | |
| TGCAAAAATACCTTAAGAGC+AGG | - | chr8.1:35580936-35580955 | None:intergenic | 35.0% | |
| TGGATATTAATATCAGGTGG+TGG | + | chr8.1:35582039-35582058 | MS.gene008871:intron | 35.0% | |
| TGGTAAGCGCGTTTATAAAT+GGG | + | chr8.1:35580863-35580882 | MS.gene008871:CDS | 35.0% | |
| TGTTAGTGTCAACCTTTGTT+AGG | + | chr8.1:35581926-35581945 | MS.gene008871:intron | 35.0% | |
| ! | ATGATAGACGGAATCTTTTC+TGG | - | chr8.1:35582938-35582957 | None:intergenic | 35.0% |
| ! | CGAGTTGCAAATGTATTGAT+AGG | + | chr8.1:35583418-35583437 | MS.gene008871:CDS | 35.0% |
| ! | TAGTCTTACGCCTTGTATTT+GGG | + | chr8.1:35582257-35582276 | MS.gene008871:intron | 35.0% |
| ! | TCTTTGTGGTTGTCCATTTT+TGG | + | chr8.1:35582162-35582181 | MS.gene008871:intron | 35.0% |
| ! | TGTTGATGTTGTTGACTACA+TGG | + | chr8.1:35582505-35582524 | MS.gene008871:intron | 35.0% |
| ! | TTGATGACTGATAAAGCTGA+AGG | + | chr8.1:35582823-35582842 | MS.gene008871:CDS | 35.0% |
| !! | ATGATATTTCGGGTGTTGAA+AGG | + | chr8.1:35583035-35583054 | MS.gene008871:CDS | 35.0% |
| !! | CAGGTTGATATAATTTCCGT+TGG | - | chr8.1:35580917-35580936 | None:intergenic | 35.0% |
| !! | GGTGTCGTTGAAAAAAATGA+AGG | + | chr8.1:35582844-35582863 | MS.gene008871:intron | 35.0% |
| !! | TGATATTTCGGGTGTTGAAA+GGG | + | chr8.1:35583036-35583055 | MS.gene008871:CDS | 35.0% |
| !! | TGATGCTAACTTGTTTGAGA+TGG | + | chr8.1:35583135-35583154 | MS.gene008871:CDS | 35.0% |
| !! | TGCATTTAATCGCTTTTCCT+AGG | + | chr8.1:35580952-35580971 | MS.gene008871:intron | 35.0% |
| !!! | GTTTTGGTTCCTTTTGCAAT+TGG | + | chr8.1:35582064-35582083 | MS.gene008871:intron | 35.0% |
| !!! | TGCAGATTTTAAGTTGGTTG+TGG | + | chr8.1:35583561-35583580 | MS.gene008871:CDS | 35.0% |
| AAGGAATTGGAGAAGAGGAA+TGG | + | chr8.1:35583172-35583191 | MS.gene008871:CDS | 40.0% | |
| AAGTCAATCCAAAACCCACT+TGG | + | chr8.1:35581660-35581679 | MS.gene008871:intron | 40.0% | |
| ACCTTTACCTCACCTAACAA+AGG | - | chr8.1:35581941-35581960 | None:intergenic | 40.0% | |
| ACCTTTGTTAGGTGAGGTAA+AGG | + | chr8.1:35581937-35581956 | MS.gene008871:intron | 40.0% | |
| AGTCAATCCAAAACCCACTT+GGG | + | chr8.1:35581661-35581680 | MS.gene008871:intron | 40.0% | |
| ATGTATAGCTTGGTCACTGA+CGG | - | chr8.1:35582683-35582702 | None:intergenic | 40.0% | |
| ATGTCTCTGATGCAACGTTA+CGG | + | chr8.1:35580717-35580736 | MS.gene008871:CDS | 40.0% | |
| ATTAGAACTTATGCAGCTGC+TGG | + | chr8.1:35583769-35583788 | MS.gene008871:CDS | 40.0% | |
| ATTGATGAGATGAAGAGGGA+TGG | + | chr8.1:35583061-35583080 | MS.gene008871:CDS | 40.0% | |
| CACTTAAGGAATTGGAGAAG+AGG | + | chr8.1:35583167-35583186 | MS.gene008871:CDS | 40.0% | |
| CCAAGCCTAATGCAAAAACT+TGG | + | chr8.1:35583509-35583528 | MS.gene008871:CDS | 40.0% | |
| CGCGTTTATAAATGGGAAGT+TGG | + | chr8.1:35580870-35580889 | MS.gene008871:CDS | 40.0% | |
| GAAATCTGTGGAATCTCTAG+GGG | + | chr8.1:35583726-35583745 | MS.gene008871:CDS | 40.0% | |
| GAATTATGGATGTAGACACG+TGG | + | chr8.1:35581368-35581387 | MS.gene008871:intron | 40.0% | |
| GCCAAATCAGAAACCACAAA+AGG | - | chr8.1:35582188-35582207 | None:intergenic | 40.0% | |
| GGAGAAGGCTGAAGAAATAA+AGG | + | chr8.1:35583465-35583484 | MS.gene008871:CDS | 40.0% | |
| GGATTGCTTAGTGTGGTTAT+AGG | + | chr8.1:35582101-35582120 | MS.gene008871:intron | 40.0% | |
| GGGTTATTGATGAGATGAAG+AGG | + | chr8.1:35583056-35583075 | MS.gene008871:CDS | 40.0% | |
| GTCTCAAGTTCGTTTCTCTT+CGG | + | chr8.1:35581732-35581751 | MS.gene008871:intron | 40.0% | |
| GTGGTAAGCGCGTTTATAAA+TGG | + | chr8.1:35580862-35580881 | MS.gene008871:CDS | 40.0% | |
| GTTGCAGCTATCAGAAACAA+TGG | + | chr8.1:35582636-35582655 | MS.gene008871:intron | 40.0% | |
| TATCAGAAACAATGGCCAAG+AGG | + | chr8.1:35582644-35582663 | MS.gene008871:CDS | 40.0% | |
| TATGCAACGACGATTGAAGA+TGG | + | chr8.1:35583807-35583826 | MS.gene008871:CDS | 40.0% | |
| TGAAGGATCTTGACTTTCCT+TGG | + | chr8.1:35582861-35582880 | MS.gene008871:intron | 40.0% | |
| TTATCCGAGGCAATCTCAAT+TGG | + | chr8.1:35583589-35583608 | MS.gene008871:CDS | 40.0% | |
| TTGAAACTCTTCAAAGACGG+TGG | + | chr8.1:35580795-35580814 | MS.gene008871:CDS | 40.0% | |
| TTGCTTAGTGTGGTTATAGG+TGG | + | chr8.1:35582104-35582123 | MS.gene008871:intron | 40.0% | |
| TTGTAAGACAGTGAACTCCA+AGG | - | chr8.1:35582881-35582900 | None:intergenic | 40.0% | |
| ! | AGATGATTTTTCGCAGACTC+AGG | - | chr8.1:35582766-35582785 | None:intergenic | 40.0% |
| ! | ATATTAGCTTGGGTTTGGAG+TGG | + | chr8.1:35581863-35581882 | MS.gene008871:intron | 40.0% |
| ! | CCAAGTTTTTGCATTAGGCT+TGG | - | chr8.1:35583512-35583531 | None:intergenic | 40.0% |
| ! | GATGATTTTTCGCAGACTCA+GGG | - | chr8.1:35582765-35582784 | None:intergenic | 40.0% |
| ! | GCCTTTTGTGGTTTCTGATT+TGG | + | chr8.1:35582184-35582203 | MS.gene008871:intron | 40.0% |
| ! | GGAAAGTGCACTTAAGGAAT+TGG | + | chr8.1:35583159-35583178 | MS.gene008871:CDS | 40.0% |
| ! | GTAGTCTTACGCCTTGTATT+TGG | + | chr8.1:35582256-35582275 | MS.gene008871:intron | 40.0% |
| ! | GTGGATTTGTGCCTGTTTTA+AGG | + | chr8.1:35582123-35582142 | MS.gene008871:intron | 40.0% |
| ! | GTTAACTTGAAAGATCTCCC+AGG | + | chr8.1:35583343-35583362 | MS.gene008871:CDS | 40.0% |
| ! | GTTCCATCATCTGAGACAAT+AGG | + | chr8.1:35583634-35583653 | MS.gene008871:CDS | 40.0% |
| ! | GTTTGATAGTTCCCTCTTTG+TGG | + | chr8.1:35582148-35582167 | MS.gene008871:intron | 40.0% |
| ! | TTCTCTTCGGTGCACTAATT+TGG | + | chr8.1:35581745-35581764 | MS.gene008871:intron | 40.0% |
| !! | AGAAAAGTGTTTCCGTGAGT+GGG | + | chr8.1:35583369-35583388 | MS.gene008871:CDS | 40.0% |
| !! | GAATAGCCTTTAGTTCTGCT+TGG | + | chr8.1:35582019-35582038 | MS.gene008871:intron | 40.0% |
| !! | GCGGAATGCAGATTTTAAGT+TGG | + | chr8.1:35583555-35583574 | MS.gene008871:CDS | 40.0% |
| !! | TCTGATTTGGCTTAGACTCT+TGG | + | chr8.1:35582197-35582216 | MS.gene008871:intron | 40.0% |
| !! | TGCTAACTTGTTTGAGATGG+CGG | + | chr8.1:35583138-35583157 | MS.gene008871:CDS | 40.0% |
| !!! | CAATTGGTTTTTTGCTAGGG+TGG | + | chr8.1:35582080-35582099 | MS.gene008871:intron | 40.0% |
| !!! | GATTTGTGCCTGTTTTAAGG+AGG | + | chr8.1:35582126-35582145 | MS.gene008871:intron | 40.0% |
| !!! | GTCTGGTAGTTTGGTTTTGT+GGG | + | chr8.1:35582234-35582253 | MS.gene008871:intron | 40.0% |
| !!! | TGGTTATTTTTCTTGGGGTC+TGG | + | chr8.1:35582217-35582236 | MS.gene008871:intron | 40.0% |
| !!! | TGTCCATTTTTGGCCTTTTG+TGG | + | chr8.1:35582172-35582191 | MS.gene008871:intron | 40.0% |
| AACGAACTTGAGACCTTGAG+AGG | - | chr8.1:35581726-35581745 | None:intergenic | 45.0% | |
| ACTTCTCAACTGCTACTGCA+AGG | + | chr8.1:35582798-35582817 | MS.gene008871:CDS | 45.0% | |
| AGATGCCCATAAGTTGCTTG+AGG | + | chr8.1:35583849-35583868 | MS.gene008871:CDS | 45.0% | |
| AGGCAATCTCAATTGGCAGA+GGG | + | chr8.1:35583596-35583615 | MS.gene008871:CDS | 45.0% | |
| ATCTCAATTGGCAGAGGGAA+TGG | + | chr8.1:35583601-35583620 | MS.gene008871:CDS | 45.0% | |
| ATGGTCGAGTCACTAGAGAT+TGG | + | chr8.1:35583080-35583099 | MS.gene008871:CDS | 45.0% | |
| CAGAGGGAATGGTGAAAAGT+GGG | + | chr8.1:35583612-35583631 | MS.gene008871:CDS | 45.0% | |
| GAAGGCTAGCAATATCATGC+CGG | + | chr8.1:35582967-35582986 | MS.gene008871:CDS | 45.0% | |
| GAGCAAGAGAAGGATGTTGA+TGG | + | chr8.1:35583676-35583695 | MS.gene008871:CDS | 45.0% | |
| GATTTGGCTGCAAAAGCTAG+AGG | + | chr8.1:35582706-35582725 | MS.gene008871:CDS | 45.0% | |
| GTGTCAACCTTTGTTAGGTG+AGG | + | chr8.1:35581931-35581950 | MS.gene008871:intron | 45.0% | |
| TCTGCCAATTGAGATTGCCT+CGG | - | chr8.1:35583596-35583615 | None:intergenic | 45.0% | |
| TTTCTTGGGGTCTGGTAGTT+TGG | + | chr8.1:35582225-35582244 | MS.gene008871:intron | 45.0% | |
| ! | AAATAAAGGAGCGTGCTCGA+AGG | + | chr8.1:35583479-35583498 | MS.gene008871:CDS | 45.0% |
| ! | CGCTTCGTCTAAGTGCTTTT+TGG | - | chr8.1:35580769-35580788 | None:intergenic | 45.0% |
| ! | GGAAACACTTTTCTGCTCCT+GGG | - | chr8.1:35583363-35583382 | None:intergenic | 45.0% |
| ! | GGTTGTGGATTGTTTATCCG+AGG | + | chr8.1:35583576-35583595 | MS.gene008871:CDS | 45.0% |
| ! | TCTCTAAATCTAGAGCTGCC+TGG | - | chr8.1:35582548-35582567 | None:intergenic | 45.0% |
| !! | CAGAAAAGTGTTTCCGTGAG+TGG | + | chr8.1:35583368-35583387 | MS.gene008871:CDS | 45.0% |
| !!! | ATATCAGGTGGTGGGTGTTT+TGG | + | chr8.1:35582048-35582067 | MS.gene008871:intron | 45.0% |
| !!! | GGTCTGGTAGTTTGGTTTTG+TGG | + | chr8.1:35582233-35582252 | MS.gene008871:intron | 45.0% |
| ATAGGGTCTGGCGTTCTCTT+AGG | + | chr8.1:35583266-35583285 | MS.gene008871:intron | 50.0% | |
| CACTAAGGGCCCTTCTAGAT+TGG | - | chr8.1:35581335-35581354 | None:intergenic | 50.0% | |
| CGCTTAAGAAGCTTCGCCAA+CGG | + | chr8.1:35580898-35580917 | MS.gene008871:CDS | 50.0% | |
| GAACTTATGCAGCTGCTGGT+AGG | + | chr8.1:35583773-35583792 | MS.gene008871:CDS | 50.0% | |
| GAGGCAATCTCAATTGGCAG+AGG | + | chr8.1:35583595-35583614 | MS.gene008871:CDS | 50.0% | |
| GCAGAGGGAATGGTGAAAAG+TGG | + | chr8.1:35583611-35583630 | MS.gene008871:CDS | 50.0% | |
| GTTGACTACATGGTCGTGTC+TGG | + | chr8.1:35582515-35582534 | MS.gene008871:intron | 50.0% | |
| GTTGCTTGAGGCTATATCCG+AGG | + | chr8.1:35583861-35583880 | MS.gene008871:CDS | 50.0% | |
| TGCAGCTTGATTCCCACTCA+CGG | - | chr8.1:35583384-35583403 | None:intergenic | 50.0% | |
| ! | CGGAAACACTTTTCTGCTCC+TGG | - | chr8.1:35583364-35583383 | None:intergenic | 50.0% |
| ! | GAAGCACTACGAGCAAGAGA+AGG | + | chr8.1:35583666-35583685 | MS.gene008871:CDS | 50.0% |
| ! | GTCGTGTCTGGAACAAAACC+AGG | + | chr8.1:35582527-35582546 | MS.gene008871:intron | 50.0% |
| ! | TGTGGAATCTCTAGGGGAAG+AGG | + | chr8.1:35583732-35583751 | MS.gene008871:CDS | 50.0% |
| !! | AAAACCCACTTGGGTTAGCC+TGG | + | chr8.1:35581670-35581689 | MS.gene008871:intron | 50.0% |
| !! | AGGCTAACCCAAGTGGGTTT+TGG | - | chr8.1:35581671-35581690 | None:intergenic | 50.0% |
| !! | CTAGGGTGGATTGCTTAGTG+TGG | + | chr8.1:35582094-35582113 | MS.gene008871:intron | 50.0% |
| !! | GATGGCGGAAAGTGCACTTA+AGG | + | chr8.1:35583153-35583172 | MS.gene008871:CDS | 50.0% |
| ACCACCAGGCTAACCCAAGT+GGG | - | chr8.1:35581677-35581696 | None:intergenic | 55.0% | |
| GGTCTGGCGTTCTCTTAGGT+AGG | + | chr8.1:35583270-35583289 | MS.gene008871:intron | 55.0% | |
| ! | AAAGGAGCGTGCTCGAAGGA+GGG | + | chr8.1:35583483-35583502 | MS.gene008871:CDS | 55.0% |
| ! | TAAAGGAGCGTGCTCGAAGG+AGG | + | chr8.1:35583482-35583501 | MS.gene008871:CDS | 55.0% |
| ! | TGGTGTGGGCTTGGTACCTT+GGG | + | chr8.1:35581693-35581712 | MS.gene008871:intron | 55.0% |
| !! | TTGGGTTAGCCTGGTGGTGT+GGG | + | chr8.1:35581679-35581698 | MS.gene008871:intron | 55.0% |
| CACCACCAGGCTAACCCAAG+TGG | - | chr8.1:35581678-35581697 | None:intergenic | 60.0% | |
| CTTGGGGTGTGCTCCTCTCA+AGG | + | chr8.1:35581710-35581729 | MS.gene008871:intron | 60.0% | |
| ! | AAGGAGCGTGCTCGAAGGAG+GGG | + | chr8.1:35583484-35583503 | MS.gene008871:CDS | 60.0% |
| ! | CTTGAGAGGAGCACACCCCA+AGG | - | chr8.1:35581712-35581731 | None:intergenic | 60.0% |
| ! | GGTGTGGGCTTGGTACCTTG+GGG | + | chr8.1:35581694-35581713 | MS.gene008871:intron | 60.0% |
| ! | GTGGTGTGGGCTTGGTACCT+TGG | + | chr8.1:35581692-35581711 | MS.gene008871:intron | 60.0% |
| ! | TTAGCCTGGTGGTGTGGGCT+TGG | + | chr8.1:35581684-35581703 | MS.gene008871:intron | 60.0% |
| !! | ACCCACTTGGGTTAGCCTGG+TGG | + | chr8.1:35581673-35581692 | MS.gene008871:intron | 60.0% |
| !! | CTTGGGTTAGCCTGGTGGTG+TGG | + | chr8.1:35581678-35581697 | MS.gene008871:intron | 60.0% |
| GGTACCAAGCCCACACCACC+AGG | - | chr8.1:35581691-35581710 | None:intergenic | 65.0% | |
| ! | AGGAGCGTGCTCGAAGGAGG+GGG | + | chr8.1:35583485-35583504 | MS.gene008871:CDS | 65.0% |
| GGAGCGTGCTCGAAGGAGGG+GGG | + | chr8.1:35583486-35583505 | MS.gene008871:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 35580717 | 35583888 | 35580717 | ID=MS.gene008871 |
| chr8.1 | mRNA | 35580717 | 35583888 | 35580717 | ID=MS.gene008871.t1;Parent=MS.gene008871 |
| chr8.1 | exon | 35580717 | 35580944 | 35580717 | ID=MS.gene008871.t1.exon1;Parent=MS.gene008871.t1 |
| chr8.1 | CDS | 35580717 | 35580944 | 35580717 | ID=cds.MS.gene008871.t1;Parent=MS.gene008871.t1 |
| chr8.1 | exon | 35582643 | 35582844 | 35582643 | ID=MS.gene008871.t1.exon2;Parent=MS.gene008871.t1 |
| chr8.1 | CDS | 35582643 | 35582844 | 35582643 | ID=cds.MS.gene008871.t1;Parent=MS.gene008871.t1 |
| chr8.1 | exon | 35582930 | 35583252 | 35582930 | ID=MS.gene008871.t1.exon3;Parent=MS.gene008871.t1 |
| chr8.1 | CDS | 35582930 | 35583252 | 35582930 | ID=cds.MS.gene008871.t1;Parent=MS.gene008871.t1 |
| chr8.1 | exon | 35583337 | 35583888 | 35583337 | ID=MS.gene008871.t1.exon4;Parent=MS.gene008871.t1 |
| chr8.1 | CDS | 35583337 | 35583888 | 35583337 | ID=cds.MS.gene008871.t1;Parent=MS.gene008871.t1 |
| Gene Sequence |
| Protein sequence |
